MD10G1279400.v1.1

Peroxisome biogenesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0015051
Physical Location & Seq
Reverse (-)
37036926 .. 37038705
1780 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1279400.v1.1.491

Sequence Viewer

Length: 975 bp
ATGCCGGTGTTCAAAACTCCGTTCAACGGTTACTCCGTCAAGTTCAGCCCCTTCTACGAGTCCCGGCTCGCCGTCGCCACCTCTCAAAACTTCGGCATCCTCGGCAACGGCCGCCTCCACGTCATCGACCTCTCTCCCGCCCCTCTGGGCCCCGGCGTACCCCGCCAACCAATCACCGAGCTCGTCTCCTACGACACCGCCGACGGCGTATACGACGTCGCATGGTCTGAGTCCCACGATTCCCTCCTAGTCGCCGCCATCGCCGACGGATCCGTCAAGATTTACGATACCGCTCTGCCCCCGGCCTCCAATCCCCTTCGCTCCCTCCACGAGCACACGCGCGAGGTCAGCTCCGCCGATTACAACCCCACGCGCCGTGACTCCTTCCTCACCTCCTCCTGGGACGACACCGTCAAGCTCTGGACCGTTGACCGCCCTGCCTCGGTTCGAACCTTCAAGGAACACGCATACTGCGTCTACTCCGCCGTATGGAACCCCCGCCACGCCGATGTATTCGCCTCCGCCTCCGGCGACTGCACTCTGCGCGTGTGGGACGTGCGAGAGCCTGGATCCACCATGATCATCCCCGCGCATGAGCTCGAGATCCTCGCGTGCGATTGGAACAAGTACGACGACTGCTGTATCGCCACGGCGTCCGTCGACAAGTCGATCAAAGTCTGGGACGTGAGGAGCATGAGGGTTCCGATCTCGGTGCTCAACGGCCACGGCTACGCCGTGAGGAAGGTGAAATTCTCGCCGCACAGGCAGAGCTTGATCATGTCGTGCTCGTACGACATGTCGGTTTGCTTATGGGATTACATGGTGGAGGATGCGCTGGTGGCGCGGTACGACCACCACACGGAGTTCGCGGTGGGCGTGGATATGAGCGTGTTGGTGGAGGGGCTTCTGGCCAGTACTGGTTGGGATGAGCTTGTGTATGTTTGGCAGCACGGGACCGATCCTAGAGCGCCGTAA

Protein Analysis

325

Amino Acids

36.14

Weight (kDa)

5.4

Isoelectric Point (pI)

46.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 66 - 188 5.5e-13 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 67 - 186 3.1e-18 WDR5 beta-propeller domain
WDR55 PF24796 67 - 233 1.6e-09 WDR55
WD40_CDC20-Fz PF24807 67 - 187 8.1e-12 CDC20/Fizzy WD40 domain
Beta-prop_EIPR1 PF23609 68 - 141 2.3e-06 EIPR1 beta-propeller
Beta-prop_WDR3_1st PF25173 68 - 229 7.5e-18 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 70 - 159 1.7e-10 THOC3 beta-propeller domain
Beta-prop_Aladin PF25460 73 - 231 1.6e-06 Aladin seven-bladed propeller
Beta-prop_WDR3_2nd PF25172 78 - 185 9.5e-07 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 107 - 315 1.4e-11 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 112 - 316 2.8e-26 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 130 - 316 8.6e-29 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 136 - 275 1.2e-17 CDC20/Fizzy WD40 domain
Beta-prop_EIPR1 PF23609 158 - 271 4e-16 EIPR1 beta-propeller
Beta-prop_EML_2 PF23414 169 - 313 2.2e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 173 - 317 1.4e-06 WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 174 - 297 6.4e-11 MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd PF25047 194 - 317 3.2e-09 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 198 - 320 3.8e-07 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 200 - 296 2.2e-10 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 210 - 317 2.5e-13 WDR3 first beta-propeller domain
WD40 PF00400 235 - 272 4.4e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G29260
fragaria_vesca FvH4_3g07730
malus_domestica MD05G1300300.v1.1 MD10G1279400.v1.1
prunus_persica Prupe.4G062000_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0010881
rosa_laevigata RLG00000031794
rosa_multiflora Rmu_sc0000109.1_g000002
rosa_roxburghii Rroxscaffold_1G00065480
rosa_rugosa Rorug04G0453500
rosa_samantha Rh5AG086200 Rh5BG080400 Rh5CG092900 Rh5DG080600
rosa_wichuraiana Rw0G017460 Rw0G017910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 272, 410
AatII GACGTC 1 cut(s) 219
AccBSI CCGCTC 1 cut(s) 293
AccI GTMKAC 3 cut(s) 210, 477, 660
AccII CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
AclWI GGATC 6 cut(s) 264, 277, 564, 577, 598, 953
AcoI YGGCCR 3 cut(s) 109, 721, 909
AcsI RAATTY 1 cut(s) 749
AcyI GRCGYC 2 cut(s) 216, 653
AfaI GTAC 5 cut(s) 159, 629, 791, 848, 916
AfiI CCNNNNNNNGG 5 cut(s) 26, 399, 442, 489, 859
AflIII ACRYGT 1 cut(s) 795
AgsI TTSAA 3 cut(s) 13, 25, 457
AjiI CACGTC 3 cut(s) 121, 556, 685
AjnI CCWGG 2 cut(s) 398, 565
AluBI AGCT 6 cut(s) 181, 351, 418, 598, 771, 931
AluI AGCT 6 cut(s) 181, 351, 418, 598, 771, 931
Alw21I GWGCWC 5 cut(s) 183, 336, 600, 717, 788
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 6 cut(s) 264, 277, 564, 577, 598, 953
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 5 cut(s) 109, 148, 303, 721, 909
ApaI GGGCCC 1 cut(s) 152
ApeKI GCWGC 1 cut(s) 946
ApoI RAATTY 1 cut(s) 749
AspLEI GCGC 7 cut(s) 342, 375, 546, 592, 835, 844, 970
AspS9I GGNCC 4 cut(s) 148, 149, 423, 954
AsuC2I CCSGG 3 cut(s) 64, 153, 302
AsuHPI GGTGA 3 cut(s) 166, 382, 757
AsuII TTCGAA 1 cut(s) 448
AvaI CYCGRG 1 cut(s) 599
AvaII GGWCC 2 cut(s) 423, 954
BaeGI GKGCMC 1 cut(s) 152
BaeI ACNNNNGTAYC 2 cut(s) 625, 658
BalI TGGCCA 1 cut(s) 911
BamHI GGATCC 2 cut(s) 269, 569
BanII GRGCYC 3 cut(s) 152, 183, 600
BauI CACGAG 1 cut(s) 329
Bbv12I GWGCWC 5 cut(s) 183, 336, 600, 717, 788
BbvI GCAGC 1 cut(s) 958
BccI CCATC 1 cut(s) 266
BcgI CGANNNNNNTGC 2 cut(s) 694, 728
BciT130I CCWGG 2 cut(s) 400, 567
BclI TGATCA 2 cut(s) 579, 774
BcnI CCSGG 3 cut(s) 64, 153, 302
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 2 cut(s) 248, 963
BfoI RGCGCY 1 cut(s) 971
BglI GCCNNNNNGGC 1 cut(s) 763
BisI GCNGC 4 cut(s) 112, 255, 758, 947
BlsI GCNGC 4 cut(s) 113, 256, 759, 948
BmcAI AGTACT 1 cut(s) 916
Bme1390I CCNGG 5 cut(s) 64, 153, 302, 400, 567
Bme18I GGWCC 2 cut(s) 423, 954
BmeT110I CYCGRG 1 cut(s) 599
BmgBI CACGTC 3 cut(s) 121, 556, 685
BmgT120I GGNCC 4 cut(s) 148, 149, 423, 954
BmiI GGNNCC 7 cut(s) 150, 151, 271, 494, 571, 702, 955
BmrFI CCNGG 5 cut(s) 64, 153, 302, 400, 567
BmsI GCATC 2 cut(s) 105, 820
BplI GAGNNNNNCTC 4 cut(s) 170, 202, 335, 367
Bpu14I TTCGAA 1 cut(s) 448
BpuMI CCSGG 3 cut(s) 64, 153, 302
BsaHI GRCGYC 2 cut(s) 216, 653
BsaJI CCNNGG 7 cut(s) 100, 151, 300, 399, 441, 648, 724
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 5 cut(s) 26, 399, 442, 489, 859
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 2 cut(s) 912, 922
BseBI CCWGG 2 cut(s) 400, 567
BseDI CCNNGG 7 cut(s) 100, 151, 300, 399, 441, 648, 724
BseGI GGATG 4 cut(s) 96, 582, 835, 931
BseLI CCNNNNNNNGG 5 cut(s) 26, 399, 442, 489, 859
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 2 cut(s) 912, 922
BseRI GAGGAG 2 cut(s) 385, 703
BseSI GKGCMC 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 109
BseXI GCAGC 1 cut(s) 958
BsgI GTGCAG 1 cut(s) 520
Bsh1236I CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 5 cut(s) 111, 150, 305, 723, 911
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 5 cut(s) 183, 336, 600, 717, 788
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 5 cut(s) 5, 64, 153, 302, 528
BsiWI CGTACG 1 cut(s) 789
BslFI GGGAC 6 cut(s) 46, 217, 416, 566, 695, 967
BslI CCNNNNNNNGG 5 cut(s) 26, 399, 442, 489, 859
BsmAI GTCTC 1 cut(s) 190
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 6 cut(s) 46, 217, 416, 566, 695, 967
BsnI GGCC 5 cut(s) 111, 150, 305, 723, 911
BsoBI CYCGRG 1 cut(s) 599
Bsp119I TTCGAA 1 cut(s) 448
Bsp120I GGGCCC 1 cut(s) 148
Bsp1286I GDGCHC 6 cut(s) 152, 183, 336, 600, 717, 788
Bsp143I GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
BspANI GGCC 5 cut(s) 111, 150, 305, 723, 911
BspCNI CTCAG 1 cut(s) 220
BspFNI CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
BspLI GGNNCC 7 cut(s) 150, 151, 271, 494, 571, 702, 955
BspPI GGATC 6 cut(s) 264, 277, 564, 577, 598, 953
BspT104I TTCGAA 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 293
BsrFI RCCGGY 1 cut(s) 4
BsrI ACTGG 2 cut(s) 912, 922
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 7 cut(s) 100, 151, 300, 399, 441, 648, 724
BssMI GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
BssNAI GTATAC 1 cut(s) 211
BssNI GRCGYC 2 cut(s) 216, 653
BssSI CACGAG 1 cut(s) 329
Bst1107I GTATAC 1 cut(s) 211
Bst2BI CACGAG 1 cut(s) 329
Bst2UI CCWGG 2 cut(s) 400, 567
Bst4CI ACNGT 3 cut(s) 29, 412, 427
BstACI GRCGYC 2 cut(s) 216, 653
BstBI TTCGAA 1 cut(s) 448
BstC8I GCNNGC 2 cut(s) 69, 613
BstDEI CTNAG 1 cut(s) 228
BstDSI CCRYGG 2 cut(s) 648, 724
BstF5I GGATG 4 cut(s) 96, 582, 835, 931
BstFNI CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
BstH2I RGCGCY 1 cut(s) 971
BstHHI GCGC 7 cut(s) 342, 375, 546, 592, 835, 844, 970
BstKTI GATC 8 cut(s) 272, 572, 582, 606, 672, 708, 777, 961
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 9 cut(s) 102, 111, 162, 260, 348, 543, 763, 839, 841
BstNI CCWGG 2 cut(s) 400, 567
BstNSI RCATGY 1 cut(s) 799
BstSCI CCNGG 5 cut(s) 62, 151, 300, 398, 565
BstSLI GKGCMC 1 cut(s) 152
BstUI CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
BstV1I GCAGC 1 cut(s) 958
BstX2I RGATCY 3 cut(s) 269, 569, 603
BstYI RGATCY 3 cut(s) 269, 569, 603
BstZ17I GTATAC 1 cut(s) 211
BstZI CGGCCG 1 cut(s) 109
BsuRI GGCC 5 cut(s) 111, 150, 305, 723, 911
BtgI CCRYGG 2 cut(s) 648, 724
BtgZI GCGATG 1 cut(s) 244
BtrI CACGTC 3 cut(s) 121, 556, 685
BtsCI GGATG 4 cut(s) 96, 582, 835, 931
Cac8I GCNNGC 2 cut(s) 69, 613
CfoI GCGC 7 cut(s) 342, 375, 546, 592, 835, 844, 970
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 4 cut(s) 148, 149, 423, 954
CseI GACGC 2 cut(s) 463, 642
Csp6I GTAC 5 cut(s) 158, 628, 790, 847, 915
CviAII CATG 7 cut(s) 222, 577, 593, 694, 778, 796, 820
CviQI GTAC 5 cut(s) 158, 628, 790, 847, 915
DdeI CTNAG 1 cut(s) 228
DpnI GATC 8 cut(s) 271, 571, 581, 605, 671, 707, 776, 960
DpnII GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
DrdI GACNNNNNNGTC 2 cut(s) 272, 410
DseDI GACNNNNNNGTC 2 cut(s) 272, 410
EaeI YGGCCR 3 cut(s) 109, 721, 909
EagI CGGCCG 1 cut(s) 109
EciI GGCGGA 3 cut(s) 343, 472, 511
Ecl136II GAGCTC 2 cut(s) 181, 598
EclXI CGGCCG 1 cut(s) 109
Eco24I GRGCYC 3 cut(s) 152, 183, 600
Eco47I GGWCC 2 cut(s) 423, 954
Eco52I CGGCCG 1 cut(s) 109
Eco53kI GAGCTC 2 cut(s) 181, 598
Eco88I CYCGRG 1 cut(s) 599
EcoICRI GAGCTC 2 cut(s) 181, 598
EcoO109I RGGNCCY 1 cut(s) 149
EcoRII CCWGG 2 cut(s) 398, 565
EcoT38I GRGCYC 3 cut(s) 152, 183, 600
Esp3I CGTCTC 1 cut(s) 190
FaeI CATG 7 cut(s) 225, 580, 596, 697, 781, 799, 823
FaqI GGGAC 6 cut(s) 46, 217, 416, 566, 695, 967
FatI CATG 7 cut(s) 221, 576, 592, 693, 777, 795, 819
FauI CCCGC 4 cut(s) 145, 170, 506, 595
FbaI TGATCA 2 cut(s) 579, 774
FblI GTMKAC 3 cut(s) 210, 477, 660
Fnu4HI GCNGC 4 cut(s) 112, 255, 758, 947
FokI GGATG 4 cut(s) 83, 569, 842, 938
FriOI GRGCYC 3 cut(s) 152, 183, 600
Fsp4HI GCNGC 4 cut(s) 112, 255, 758, 947
FspBI CTAG 2 cut(s) 248, 963
GlaI GCGC 7 cut(s) 341, 374, 545, 591, 834, 843, 969
GluI GCNGC 4 cut(s) 112, 255, 758, 947
HaeII RGCGCY 1 cut(s) 971
HaeIII GGCC 5 cut(s) 111, 150, 305, 723, 911
HapII CCGG 5 cut(s) 5, 64, 153, 302, 528
HgaI GACGC 2 cut(s) 463, 642
HhaI GCGC 7 cut(s) 342, 375, 546, 592, 835, 844, 970
Hin1I GRCGYC 2 cut(s) 216, 653
Hin1II CATG 7 cut(s) 225, 580, 596, 697, 781, 799, 823
Hin6I GCGC 7 cut(s) 340, 373, 544, 590, 833, 842, 968
HinP1I GCGC 7 cut(s) 340, 373, 544, 590, 833, 842, 968
HincII GTYRAC 2 cut(s) 430, 661
HindII GTYRAC 2 cut(s) 430, 661
HinfI GANTC 4 cut(s) 59, 230, 239, 380
HpaII CCGG 5 cut(s) 5, 64, 153, 302, 528
HphI GGTGA 3 cut(s) 166, 382, 757
Hpy166II GTNNAC 4 cut(s) 211, 430, 478, 661
Hpy188I TCNGA 2 cut(s) 229, 705
Hpy188III TCNNGA 3 cut(s) 277, 421, 601
Hpy8I GTNNAC 4 cut(s) 211, 430, 478, 661
Hpy99I CGWCG 7 cut(s) 77, 206, 218, 221, 269, 635, 662
HpyAV CCTTC 5 cut(s) 61, 326, 394, 463, 736
HpyCH4III ACNGT 3 cut(s) 29, 412, 427
HpyCH4IV ACGT 4 cut(s) 120, 216, 555, 684
HpyCH4V TGCA 1 cut(s) 537
HpyF10VI GCNNNNNNNGC 9 cut(s) 102, 111, 162, 260, 348, 543, 763, 839, 841
HpyF3I CTNAG 1 cut(s) 228
HpySE526I ACGT 4 cut(s) 120, 216, 555, 684
Hsp92I GRCGYC 2 cut(s) 216, 653
Hsp92II CATG 7 cut(s) 225, 580, 596, 697, 781, 799, 823
HspAI GCGC 7 cut(s) 340, 373, 544, 590, 833, 842, 968
Ksp22I TGATCA 2 cut(s) 579, 774
Kzo9I GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
LmnI GCTCC 3 cut(s) 326, 356, 690
Lsp1109I GCAGC 1 cut(s) 958
LweI GCATC 2 cut(s) 105, 820
MaeI CTAG 2 cut(s) 248, 963
MaeII ACGT 4 cut(s) 120, 216, 555, 684
MaeIII GTNAC 2 cut(s) 29, 377
MalI GATC 8 cut(s) 271, 571, 581, 605, 671, 707, 776, 960
MbiI CCGCTC 1 cut(s) 293
MboI GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
MflI RGATCY 3 cut(s) 269, 569, 603
MhlI GDGCHC 6 cut(s) 152, 183, 336, 600, 717, 788
MlsI TGGCCA 1 cut(s) 911
MluCI AATT 1 cut(s) 749
MluNI TGGCCA 1 cut(s) 911
MlyI GAGTC 3 cut(s) 68, 239, 374
Mox20I TGGCCA 1 cut(s) 911
MscI TGGCCA 1 cut(s) 911
MslI CAYNNNNRTG 1 cut(s) 507
Msp20I TGGCCA 1 cut(s) 911
MspI CCGG 5 cut(s) 5, 64, 153, 302, 528
MspR9I CCNGG 5 cut(s) 64, 153, 302, 400, 567
MvaI CCWGG 2 cut(s) 400, 567
MvnI CGCG 8 cut(s) 340, 342, 373, 546, 590, 611, 844, 869
MwoI GCNNNNNNNGC 9 cut(s) 102, 111, 162, 260, 348, 543, 763, 839, 841
NciI CCSGG 3 cut(s) 64, 153, 302
NdeII GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
NlaIII CATG 7 cut(s) 225, 580, 596, 697, 781, 799, 823
NlaIV GGNNCC 7 cut(s) 150, 151, 271, 494, 571, 702, 955
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 1 cut(s) 377
NspI RCATGY 1 cut(s) 799
NspV TTCGAA 1 cut(s) 448
PaeR7I CTCGAG 1 cut(s) 599
PciI ACATGT 1 cut(s) 795
PcsI WCGNNNNNNNCGW 7 cut(s) 33, 189, 198, 210, 471, 732, 873
PfeI GAWTC 1 cut(s) 239
Pfl23II CGTACG 1 cut(s) 789
PflFI GACNNNGTC 1 cut(s) 410
PkrI GCNGC 4 cut(s) 113, 256, 759, 948
PleI GAGTC 3 cut(s) 67, 238, 374
PpsI GAGTC 3 cut(s) 67, 238, 374
PscI ACATGT 1 cut(s) 795
Psp124BI GAGCTC 2 cut(s) 183, 600
Psp6I CCWGG 2 cut(s) 398, 565
PspGI CCWGG 2 cut(s) 398, 565
PspLI CGTACG 1 cut(s) 789
PspN4I GGNNCC 7 cut(s) 150, 151, 271, 494, 571, 702, 955
PspOMI GGGCCC 1 cut(s) 148
PspPI GGNCC 4 cut(s) 148, 149, 423, 954
PsuI RGATCY 3 cut(s) 269, 569, 603
PsyI GACNNNGTC 1 cut(s) 410
RsaI GTAC 5 cut(s) 159, 629, 791, 848, 916
RsaNI GTAC 5 cut(s) 158, 628, 790, 847, 915
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 2 cut(s) 183, 600
SalI GTCGAC 1 cut(s) 659
SatI GCNGC 4 cut(s) 112, 255, 758, 947
Sau3AI GATC 8 cut(s) 269, 569, 579, 603, 669, 705, 774, 958
Sau96I GGNCC 4 cut(s) 148, 149, 423, 954
ScaI AGTACT 1 cut(s) 916
SchI GAGTC 3 cut(s) 68, 239, 374
ScrFI CCNGG 5 cut(s) 64, 153, 302, 400, 567
SduI GDGCHC 6 cut(s) 152, 183, 336, 600, 717, 788
SfaNI GCATC 2 cut(s) 105, 820
Sfr274I CTCGAG 1 cut(s) 599
SfuI TTCGAA 1 cut(s) 448
SinI GGWCC 2 cut(s) 423, 954
SlaI CTCGAG 1 cut(s) 599
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 599
SmoI CTYRAG 1 cut(s) 599
Sse9I AATT 1 cut(s) 749
SspMI CTAG 2 cut(s) 248, 963
SstI GAGCTC 2 cut(s) 183, 600
StyD4I CCNGG 5 cut(s) 62, 151, 300, 398, 565
TaaI ACNGT 3 cut(s) 29, 412, 427
TaiI ACGT 4 cut(s) 123, 219, 558, 687
TaqI TCGA 5 cut(s) 126, 448, 600, 660, 668
TaqII GACCGA 1 cut(s) 971
TasI AATT 1 cut(s) 749
TatI WGTACW 1 cut(s) 914
TauI GCSGC 3 cut(s) 114, 257, 760
TfiI GAWTC 1 cut(s) 239
TseFI GTSAC 1 cut(s) 377
TseI GCWGC 1 cut(s) 946
Tsp45I GTSAC 1 cut(s) 377
TspGWI ACGGA 6 cut(s) 9, 25, 262, 282, 646, 875
Tth111I GACNNNGTC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 423, 954
XapI RAATTY 1 cut(s) 749
XceI RCATGY 1 cut(s) 799
XhoI CTCGAG 1 cut(s) 599
XmiI GTMKAC 3 cut(s) 210, 477, 660
XspI CTAG 2 cut(s) 248, 963
ZraI GACGTC 1 cut(s) 217
ZrmI AGTACT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.