FvH4_3g10620

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0018813
Physical Location & Seq
Reverse (-)
6335557 .. 6338449
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10620.t1

Sequence Viewer

Length: 1476 bp
ATGAATTCAGGAGCAGTAGTAGTAGTACCAATATTGGTGGTGGTTGTATTAGCAGCAGCAACAACTAGAACAGCATCTGCACAAGCCTTGCCTAACTGCCCCGATCGCTGCGGTGATGTGAAAATCCCATATCCATTTGGCATTGTTGAAGGTTGTTACCTGCGAGATGAGTTTTCTATCAACTGTACTAGTACTGAAGACAATGCCGGCCTAGTAGCAAAACTCAACAGTCCTTTCTCATCGTCACCAACATCACCATTGACTGATCTCATTGTTACTGACATAAACCTCGACAGTCCTGAGTTGCGTGTCCGGTCCTCGGTATACAGAGACTGCGGCGGAGGAGAGACCCTGAACCAGTGGCTACGGTTGCCCTCTCCTTTTGCATTTTCCACCAAGAACATCTTCTTTGCCGTCGGCTGTGCCACTTTTGCAAAATATCGAGGTTACCAATATCGTCCCTCTGGCAGGATGCTGACCCCATATGAAGATCAAGCCTACAACAAAAGCGGCTTCGCTGTAACGCAATGTGATGATAGTCTTGGCACCTCTTGCTCTGGCAATGGCTGTTCGCAAGCTTCAATCCCGAGTGGACTGCAAAATTTCACTGTAGAGTCTTTGTTAACCATCAGTATAATTAGGGTCCATGTCCCTATATGGGGAAACTGGTCCAGTAAACACCTAGAGTTAGAGTGCAACTATGGATTCCTTGCGGAACAAGGCTACTTCTCATCCTCCCCAAATATAAGTTATGTCGAACTCCGAATGTACAGAAGTCTGCCGGTCCCAACGACAACGGTGGTTAACTGGCAAATTGGGGATGTGCCATGTGAAGAAGCTCAAAAGAACAAGGGAAATTATGCTTGCAAGGGAAATAGCATCTGCGTAAATCGGTCCAATGTCAGTGAGGGTGGATATGAATCATATGATGGATGGCCTCTAGGCTACATTTGCCGGTGCTTGCCGGGTTACCAAGGGAATCCATATCTTCCAGACGGTTGTCAAGGTATCTCTGCATCAGTACTCTTTATGATAGTGGTTGGTGGTTTAGGATCGATATATTGGGGAATGAAGAAACGAGAGTCCATAAATTTGAAAGATAAGTACTTCGAAAAAAATGGTGGTTTGTTGTTACAACAGCTTGCTAGTCGTCATGGAGTGGAGATGGCCAAAATATTTACTGCAGAAGAGCTTGAGAAGGCCACAAACAATTACGACGAAAGCAGAGTCCTTGGTGAAGGAGGTTGTGGGATAGTTTACAAGGGAATGTTGCAGGATAGCAGAACGGTTGCTATAAAGAAGCCCAAAATGTTCTTGGAGATGATGAGCACCAAAAACTGTCGCGTGACGAAGGTGATGCAGAAGGGTGATGCGTTTGGACTTGTGCACTACCAGAGAAATGTAGGAACTGGAAATGCTGTGCAGCTGTTGCATTTGCTGCTCTCAGCAGGCAAGACCAAGATCCTGGTGTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

492

Amino Acids

53.74

Weight (kDa)

8.18

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 104 2.5e-08 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018813)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10620
rosa_chinensis RchiOBHm_Chr5g0017331
rosa_laevigata RLG00000032274
rosa_multiflora Rmu_co8169364.1_g000001 Rmu_sc0005223.1_g000006 Rmu_sc0005223.1_g000026 Rmu_sc0005319.1_g000009
rosa_roxburghii Rroxscaffold_1G00060030
rosa_rugosa Rorug05G0034000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 168
AccB1I GGYRCC 1 cut(s) 545
AccI GTMKAC 1 cut(s) 324
AccII CGCG 1 cut(s) 1344
AciI CCGC 5 cut(s) 111, 336, 339, 510, 713
AclWI GGATC 2 cut(s) 1060, 1456
AcoI YGGCCR 1 cut(s) 1167
AcsI RAATTY 3 cut(s) 4, 601, 1090
AcuI CTGAAG 1 cut(s) 216
AfaI GTAC 6 cut(s) 27, 187, 193, 770, 1023, 1106
AfiI CCNNNNNNNGG 4 cut(s) 319, 468, 658, 659
AgsI TTSAA 3 cut(s) 149, 582, 1096
AhlI ACTAGT 1 cut(s) 188
AjnI CCWGG 1 cut(s) 1464
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AluBI AGCT 5 cut(s) 578, 839, 1141, 1192, 1426
AluI AGCT 5 cut(s) 578, 839, 1141, 1192, 1426
Alw21I GWGCWC 2 cut(s) 1331, 1389
Alw26I GTCTC 2 cut(s) 324, 341
Alw44I GTGCAC 1 cut(s) 1385
AlwI GGATC 2 cut(s) 1060, 1456
AlwNI CAGNNNCTG 2 cut(s) 77, 333
Ama87I CYCGRG 1 cut(s) 586
AoxI GGCC 4 cut(s) 208, 935, 1167, 1200
ApaLI GTGCAC 1 cut(s) 1385
ApeKI GCWGC 5 cut(s) 53, 56, 108, 1423, 1438
ApoI RAATTY 3 cut(s) 4, 601, 1090
ArsI GACNNNNNNTTYG 2 cut(s) 1212, 1244
Asp700I GAANNNNTTC 1 cut(s) 404
AspS9I GGNCC 5 cut(s) 315, 643, 669, 784, 894
AsuC2I CCSGG 1 cut(s) 966
AsuHPI GGTGA 6 cut(s) 125, 237, 246, 1247, 1366, 1379
AsuII TTCGAA 1 cut(s) 1110
AvaI CYCGRG 1 cut(s) 586
AvaII GGWCC 5 cut(s) 315, 643, 669, 784, 894
BaeGI GKGCMC 1 cut(s) 1389
BalI TGGCCA 1 cut(s) 1169
BanI GGYRCC 1 cut(s) 545
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 2 cut(s) 1331, 1389
BbvI GCAGC 5 cut(s) 65, 68, 95, 1425, 1435
BccI CCATC 4 cut(s) 635, 923, 927, 1159
BceAI ACGGC 1 cut(s) 398
BcgI CGANNNNNNTGC 4 cut(s) 577, 611, 1339, 1373
BciT130I CCWGG 1 cut(s) 1466
BcnI CCSGG 1 cut(s) 966
BcoDI GTCTC 2 cut(s) 324, 341
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 6 cut(s) 66, 189, 212, 683, 941, 1146
BfmI CTRYAG 2 cut(s) 609, 1182
BfuAI ACCTGC 1 cut(s) 168
BisI GCNGC 7 cut(s) 54, 57, 109, 337, 511, 1424, 1439
BlsI GCNGC 7 cut(s) 55, 58, 110, 338, 512, 1425, 1440
BmcAI AGTACT 3 cut(s) 193, 1023, 1106
Bme1390I CCNGG 2 cut(s) 966, 1466
Bme18I GGWCC 5 cut(s) 315, 643, 669, 784, 894
BmeT110I CYCGRG 1 cut(s) 586
BmgT120I GGNCC 5 cut(s) 315, 643, 669, 784, 894
BmiI GGNNCC 3 cut(s) 547, 644, 786
BmrFI CCNGG 2 cut(s) 966, 1466
BmsI GCATC 6 cut(s) 83, 462, 888, 1025, 1347, 1360
BoxI GACNNNNGTC 1 cut(s) 999
BpiI GAAGAC 1 cut(s) 204
Bpu14I TTCGAA 1 cut(s) 1110
BpuEI CTTGAG 1 cut(s) 1214
BpuMI CCSGG 1 cut(s) 966
Bsa29I ATCGAT 1 cut(s) 1055
BsaBI GATNNNNATC 1 cut(s) 919
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 3 cut(s) 318, 973, 1231
BsaWI WCCGGW 1 cut(s) 312
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 468, 658, 659
Bse118I RCCGGY 3 cut(s) 206, 781, 954
Bse1I ACTGG 5 cut(s) 358, 671, 672, 812, 1414
Bse3DI GCAATG 2 cut(s) 533, 568
Bse8I GATNNNNATC 1 cut(s) 919
BseBI CCWGG 1 cut(s) 1466
BseCI ATCGAT 1 cut(s) 1055
BseDI CCNNGG 3 cut(s) 318, 973, 1231
BseGI GGATG 4 cut(s) 477, 731, 826, 938
BseJI GATNNNNATC 1 cut(s) 919
BseLI CCNNNNNNNGG 4 cut(s) 319, 468, 658, 659
BseMI GCAATG 2 cut(s) 533, 568
BseMII CTCAG 2 cut(s) 291, 1458
BseNI ACTGG 5 cut(s) 358, 671, 672, 812, 1414
BseRI GAGGAG 1 cut(s) 357
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 5 cut(s) 65, 68, 95, 1425, 1435
BsgI GTGCAG 2 cut(s) 63, 1442
Bsh1236I CGCG 1 cut(s) 1344
Bsh1285I CGRYCG 1 cut(s) 106
BshFI GGCC 4 cut(s) 210, 937, 1169, 1202
BshNI GGYRCC 1 cut(s) 545
BshVI ATCGAT 1 cut(s) 1055
BsiEI CGRYCG 1 cut(s) 106
BsiHKAI GWGCWC 2 cut(s) 1331, 1389
BsiHKCI CYCGRG 1 cut(s) 586
BsiSI CCGG 5 cut(s) 207, 313, 782, 955, 965
BslFI GGGAC 3 cut(s) 444, 635, 770
BslI CCNNNNNNNGG 4 cut(s) 319, 468, 658, 659
BsmAI GTCTC 2 cut(s) 324, 341
BsmFI GGGAC 3 cut(s) 444, 635, 770
BsnI GGCC 4 cut(s) 210, 937, 1169, 1202
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 1 cut(s) 586
Bsp119I TTCGAA 1 cut(s) 1110
Bsp1286I GDGCHC 2 cut(s) 1331, 1389
Bsp1407I TGTACA 1 cut(s) 768
Bsp143I GATC 5 cut(s) 103, 265, 490, 1052, 1461
BspACI CCGC 5 cut(s) 111, 336, 339, 510, 713
BspANI GGCC 4 cut(s) 210, 937, 1169, 1202
BspCNI CTCAG 2 cut(s) 292, 1457
BspDI ATCGAT 1 cut(s) 1055
BspFNI CGCG 1 cut(s) 1344
BspLI GGNNCC 3 cut(s) 547, 644, 786
BspMAI CTGCAG 1 cut(s) 1186
BspMI ACCTGC 1 cut(s) 168
BspPI GGATC 2 cut(s) 1060, 1456
BspQI GCTCTTC 1 cut(s) 1182
BspT104I TTCGAA 1 cut(s) 1110
BspT107I GGYRCC 1 cut(s) 545
BspTNI GGTCTC 1 cut(s) 341
BsrDI GCAATG 2 cut(s) 533, 568
BsrFI RCCGGY 3 cut(s) 206, 781, 954
BsrGI TGTACA 1 cut(s) 768
BsrI ACTGG 5 cut(s) 358, 671, 672, 812, 1414
BssAI RCCGGY 3 cut(s) 206, 781, 954
BssECI CCNNGG 3 cut(s) 318, 973, 1231
BssMI GATC 5 cut(s) 103, 265, 490, 1052, 1461
BssNAI GTATAC 1 cut(s) 325
BssT1I CCWWGG 2 cut(s) 973, 1231
Bst1107I GTATAC 1 cut(s) 325
Bst2UI CCWGG 1 cut(s) 1466
Bst4CI ACNGT 9 cut(s) 185, 230, 296, 369, 610, 799, 998, 1288, 1340
Bst6I CTCTTC 1 cut(s) 1182
BstAPI GCANNNNNTGC 3 cut(s) 552, 1429, 1438
BstAUI TGTACA 1 cut(s) 768
BstBI TTCGAA 1 cut(s) 1110
BstC8I GCNNGC 6 cut(s) 208, 576, 865, 962, 1143, 1450
BstDEI CTNAG 2 cut(s) 300, 1444
BstEII GGTNACC 2 cut(s) 446, 968
BstENI CCTNNNNNAGG 1 cut(s) 466
BstF5I GGATG 4 cut(s) 477, 731, 826, 938
BstFNI CGCG 1 cut(s) 1344
BstKTI GATC 5 cut(s) 106, 268, 493, 1055, 1464
BstMAI GTCTC 2 cut(s) 324, 341
BstMBI GATC 5 cut(s) 103, 265, 490, 1052, 1461
BstMCI CGRYCG 1 cut(s) 106
BstMWI GCNNNNNNNGC 7 cut(s) 105, 370, 431, 552, 951, 1429, 1438
BstNI CCWGG 1 cut(s) 1466
BstPAI GACNNNNGTC 1 cut(s) 999
BstPI GGTNACC 2 cut(s) 446, 968
BstSCI CCNGG 2 cut(s) 964, 1464
BstSFI CTRYAG 2 cut(s) 609, 1182
BstSLI GKGCMC 1 cut(s) 1389
BstUI CGCG 1 cut(s) 1344
BstV1I GCAGC 5 cut(s) 65, 68, 95, 1425, 1435
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 1 cut(s) 1461
BstXI CCANNNNNNTGG 1 cut(s) 1465
BstYI RGATCY 1 cut(s) 1461
BstZ17I GTATAC 1 cut(s) 325
Bsu15I ATCGAT 1 cut(s) 1055
BsuRI GGCC 4 cut(s) 210, 937, 1169, 1202
BsuTUI ATCGAT 1 cut(s) 1055
BtsCI GGATG 4 cut(s) 477, 731, 826, 938
BtsIMutI CAGTG 3 cut(s) 365, 606, 910
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 6 cut(s) 208, 576, 865, 962, 1143, 1450
CaiI CAGNNNCTG 2 cut(s) 77, 333
Cfr10I RCCGGY 3 cut(s) 206, 781, 954
Cfr13I GGNCC 5 cut(s) 315, 643, 669, 784, 894
ClaI ATCGAT 1 cut(s) 1055
Csp6I GTAC 6 cut(s) 26, 186, 192, 769, 1022, 1105
CspCI CAANNNNNGTGG 2 cut(s) 18, 53
CviAII CATG 3 cut(s) 647, 828, 1154
CviQI GTAC 6 cut(s) 26, 186, 192, 769, 1022, 1105
DdeI CTNAG 2 cut(s) 300, 1444
DpnI GATC 5 cut(s) 105, 267, 492, 1054, 1463
DpnII GATC 5 cut(s) 103, 265, 490, 1052, 1461
EaeI YGGCCR 1 cut(s) 1167
Eam1104I CTCTTC 1 cut(s) 1182
EarI CTCTTC 1 cut(s) 1182
EciI GGCGGA 1 cut(s) 354
Eco130I CCWWGG 2 cut(s) 973, 1231
Eco31I GGTCTC 1 cut(s) 341
Eco47I GGWCC 5 cut(s) 315, 643, 669, 784, 894
Eco57I CTGAAG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 586
Eco91I GGTNACC 2 cut(s) 446, 968
EcoNI CCTNNNNNAGG 1 cut(s) 466
EcoO65I GGTNACC 2 cut(s) 446, 968
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 1464
EcoT14I CCWWGG 2 cut(s) 973, 1231
ErhI CCWWGG 2 cut(s) 973, 1231
FaeI CATG 3 cut(s) 650, 831, 1157
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 3 cut(s) 444, 635, 770
FatI CATG 3 cut(s) 646, 827, 1153
FauNDI CATATG 2 cut(s) 484, 925
FblI GTMKAC 1 cut(s) 324
Fnu4HI GCNGC 7 cut(s) 54, 57, 109, 337, 511, 1424, 1439
FokI GGATG 4 cut(s) 484, 718, 833, 945
Fsp4HI GCNGC 7 cut(s) 54, 57, 109, 337, 511, 1424, 1439
FspBI CTAG 6 cut(s) 66, 189, 212, 683, 941, 1146
GluI GCNGC 7 cut(s) 54, 57, 109, 337, 511, 1424, 1439
HaeIII GGCC 4 cut(s) 210, 937, 1169, 1202
HapII CCGG 5 cut(s) 207, 313, 782, 955, 965
Hin1II CATG 3 cut(s) 650, 831, 1157
HincII GTYRAC 2 cut(s) 624, 805
HindII GTYRAC 2 cut(s) 624, 805
HindIII AAGCTT 1 cut(s) 576
HinfI GANTC 6 cut(s) 614, 705, 920, 979, 1082, 1227
HpaI GTTAAC 2 cut(s) 624, 805
HpaII CCGG 5 cut(s) 207, 313, 782, 955, 965
HphI GGTGA 6 cut(s) 125, 237, 246, 1247, 1366, 1379
Hpy166II GTNNAC 7 cut(s) 325, 593, 624, 677, 805, 1258, 1387
Hpy188I TCNGA 1 cut(s) 764
Hpy188III TCNNGA 4 cut(s) 9, 299, 586, 992
Hpy8I GTNNAC 7 cut(s) 325, 593, 624, 677, 805, 1258, 1387
Hpy99I CGWCG 2 cut(s) 419, 1220
HpyAV CCTTC 5 cut(s) 143, 1192, 1232, 1345, 1357
HpyCH4III ACNGT 9 cut(s) 185, 230, 296, 369, 610, 799, 998, 1288, 1340
HpyF10VI GCNNNNNNNGC 7 cut(s) 105, 370, 431, 552, 951, 1429, 1438
HpyF3I CTNAG 2 cut(s) 300, 1444
Hsp92II CATG 3 cut(s) 650, 831, 1157
KroI GCCGGC 1 cut(s) 206
KroNI GCCGGC 1 cut(s) 208
KspAI GTTAAC 2 cut(s) 624, 805
Kzo9I GATC 5 cut(s) 103, 265, 490, 1052, 1461
LguI GCTCTTC 1 cut(s) 1182
LmnI GCTCC 1 cut(s) 11
Lsp1109I GCAGC 5 cut(s) 65, 68, 95, 1425, 1435
LweI GCATC 6 cut(s) 83, 462, 888, 1025, 1347, 1360
MaeI CTAG 6 cut(s) 66, 189, 212, 683, 941, 1146
MaeIII GTNAC 8 cut(s) 155, 243, 274, 446, 520, 968, 1131, 1345
MalI GATC 5 cut(s) 105, 267, 492, 1054, 1463
MboI GATC 5 cut(s) 103, 265, 490, 1052, 1461
MboII GAAGA 7 cut(s) 209, 397, 500, 845, 980, 1084, 1199
MflI RGATCY 1 cut(s) 1461
MhlI GDGCHC 2 cut(s) 1331, 1389
MlsI TGGCCA 1 cut(s) 1169
MluCI AATT 7 cut(s) 4, 601, 636, 813, 856, 1090, 1210
MluNI TGGCCA 1 cut(s) 1169
MlyI GAGTC 3 cut(s) 623, 1091, 1236
Mox20I TGGCCA 1 cut(s) 1169
MroNI GCCGGC 1 cut(s) 206
MroXI GAANNNNTTC 1 cut(s) 404
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 2 cut(s) 623, 804
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 1426
MspI CCGG 5 cut(s) 207, 313, 782, 955, 965
MspR9I CCNGG 2 cut(s) 966, 1466
MvaI CCWGG 1 cut(s) 1466
MvnI CGCG 1 cut(s) 1344
MwoI GCNNNNNNNGC 7 cut(s) 105, 370, 431, 552, 951, 1429, 1438
NaeI GCCGGC 1 cut(s) 208
NciI CCSGG 1 cut(s) 966
NdeI CATATG 2 cut(s) 484, 925
NdeII GATC 5 cut(s) 103, 265, 490, 1052, 1461
NgoMIV GCCGGC 1 cut(s) 206
NlaIII CATG 3 cut(s) 650, 831, 1157
NlaIV GGNNCC 3 cut(s) 547, 644, 786
NmuCI GTSAC 2 cut(s) 243, 1345
NspV TTCGAA 1 cut(s) 1110
PciSI GCTCTTC 1 cut(s) 1182
PdiI GCCGGC 1 cut(s) 208
PdmI GAANNNNTTC 1 cut(s) 404
PfeI GAWTC 3 cut(s) 705, 920, 979
PkrI GCNGC 7 cut(s) 55, 58, 110, 338, 512, 1425, 1440
Ple19I CGATCG 1 cut(s) 106
PleI GAGTC 3 cut(s) 622, 1090, 1235
PpsI GAGTC 3 cut(s) 622, 1090, 1235
PshAI GACNNNNGTC 1 cut(s) 999
Psp6I CCWGG 1 cut(s) 1464
PspEI GGTNACC 2 cut(s) 446, 968
PspGI CCWGG 1 cut(s) 1464
PspN4I GGNNCC 3 cut(s) 547, 644, 786
PspPI GGNCC 5 cut(s) 315, 643, 669, 784, 894
PstI CTGCAG 1 cut(s) 1186
PstNI CAGNNNCTG 2 cut(s) 77, 333
PsuI RGATCY 1 cut(s) 1461
PvuI CGATCG 1 cut(s) 106
PvuII CAGCTG 1 cut(s) 1426
RsaI GTAC 6 cut(s) 27, 187, 193, 770, 1023, 1106
RsaNI GTAC 6 cut(s) 26, 186, 192, 769, 1022, 1105
SapI GCTCTTC 1 cut(s) 1182
SaqAI TTAA 2 cut(s) 623, 804
SatI GCNGC 7 cut(s) 54, 57, 109, 337, 511, 1424, 1439
Sau3AI GATC 5 cut(s) 103, 265, 490, 1052, 1461
Sau96I GGNCC 5 cut(s) 315, 643, 669, 784, 894
ScaI AGTACT 3 cut(s) 193, 1023, 1106
SchI GAGTC 3 cut(s) 623, 1091, 1236
ScrFI CCNGG 2 cut(s) 966, 1466
SduI GDGCHC 2 cut(s) 1331, 1389
SfaNI GCATC 6 cut(s) 83, 462, 888, 1025, 1347, 1360
SfcI CTRYAG 2 cut(s) 609, 1182
SfuI TTCGAA 1 cut(s) 1110
SinI GGWCC 5 cut(s) 315, 643, 669, 784, 894
SmlI CTYRAG 1 cut(s) 1193
SmoI CTYRAG 1 cut(s) 1193
SpeI ACTAGT 1 cut(s) 188
Sse9I AATT 7 cut(s) 4, 601, 636, 813, 856, 1090, 1210
SsiI CCGC 5 cut(s) 111, 336, 339, 510, 713
SspI AATATT 2 cut(s) 33, 1176
SspMI CTAG 6 cut(s) 66, 189, 212, 683, 941, 1146
StyD4I CCNGG 2 cut(s) 964, 1464
StyI CCWWGG 2 cut(s) 973, 1231
TaaI ACNGT 9 cut(s) 185, 230, 296, 369, 610, 799, 998, 1288, 1340
TaqI TCGA 5 cut(s) 291, 442, 756, 1055, 1110
TaqII GACCGA 1 cut(s) 882
TasI AATT 7 cut(s) 4, 601, 636, 813, 856, 1090, 1210
TatI WGTACW 5 cut(s) 185, 191, 768, 1021, 1104
TauI GCSGC 2 cut(s) 339, 513
TfiI GAWTC 3 cut(s) 705, 920, 979
Tru1I TTAA 2 cut(s) 623, 804
Tru9I TTAA 2 cut(s) 623, 804
TscAI CASTG 3 cut(s) 365, 613, 910
TseFI GTSAC 2 cut(s) 243, 1345
TseI GCWGC 5 cut(s) 53, 56, 108, 1423, 1438
Tsp45I GTSAC 2 cut(s) 243, 1345
TspDTI ATGAA 4 cut(s) 17, 501, 933, 1085
TspRI CASTG 3 cut(s) 365, 613, 910
VneI GTGCAC 1 cut(s) 1385
VpaK11BI GGWCC 5 cut(s) 315, 643, 669, 784, 894
XagI CCTNNNNNAGG 1 cut(s) 466
XapI RAATTY 3 cut(s) 4, 601, 1090
XcmI CCANNNNNNNNNTGG 1 cut(s) 1312
XmiI GTMKAC 1 cut(s) 324
XmnI GAANNNNTTC 1 cut(s) 404
XspI CTAG 6 cut(s) 66, 189, 212, 683, 941, 1146
ZrmI AGTACT 3 cut(s) 193, 1023, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.