RchiOBHm_Chr5g0017331

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0018813
Physical Location & Seq
Reverse (-)
12019326 .. 12021985
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29763

Sequence Viewer

Length: 2310 bp
ATGTTAGGAGTAGTAGTACCAATATTGGTGGTGGTTGTATTAGCGGCTGCAACAAGTAGTAGTACAACATCTGCACAAGCCTTGCCTAACTGTCCCGATCGCTGCGGTGATGTGAAAATCTCCTATCCATTTGGCACTGTTAAAGGTTGTTACCTGCGAGATGAGTTTTTTATCAACTGTACTAGTGCTGAAGGCAATGCCTCAGTAGCAAAACTCACGAGTCCTCCCTCATCGTCACCAACATCACCATTGACTGATCTCATTGTTACTGACATAAGCCTTGACAACGCTGAGTTGCGTATCTTGTCCTCTGTATACCAAGACTGCGGCGACCGCAAAGAGACCCTGAACAAGTGGCTTCGGCTGCCCTCTCCTTTTGCATTTTCCACCAAAAACATCTTCTTTGCCGTCGGCTGTGCCACTTTTGCAAAATATCGAGGTTACCAATATCGTCCCTCCGGCAGGATCCTGGGCCCAGATGATGATCAAGCCTACAACAAAAGCGGCTTTGCCGTAACCCAATGTGATGATAGTTTTGGCACCACTTGCTCTGGCAATGGCTGTTCCCAATCTTCAATCCCGAGTGGACTGCAAAATTTCACTGTTGAGTCTTTGTTAAGCATCAGCATAAATGGCTATATCCCTAATCAGGGAAAGTGGTACAGTCCATACTTAGGGTGCAACTACGGCTTCCTTGCGGAAGAAGGCAACTTCTCATTCTCCCCCAATATAAGTTTTGCCCAACTCCAAAAGTACAGAAGGCTGCTGGTCCCAACCACAACGGTGATTAATTGGCAAGTTGGGGATGAGCCGTGTGAAGAAGCTCAAAAGAGCAAGGGAAGTTATGCTTGTAAGGGAAATAGCACGTGCGTCAATTGGTCCAATGTCAATGAGGGTGGATATGGTGGATGGCATCTAGGCTACATTTGCCGGTGCTTGCCAGGTTACCAAGGGAATCCATACCTTGCAGATGGTTGTCAAGATATCAATGAGTGTCAGAGTTCAGACCGCTGCAGGACAGAAGAACTCTGCGTAAATCTACCAGGACAGTATAAATGTGATCCCAATCAATTGAAGACATCTCTGAGGTTTTTAATTTCATTTGGTATCTTTGCATCAGTCTTTGTGATAGTGGTTGGAGGTTTAGGGTCGATATATTGGGAAATGAAGAAACGAGAGTACATGATTTTGAAAGAAAAGTATTTTGAAAAAAATGGTGGTTTATTGTTACAACAGCTTGCTAATCATCATGGAGTGGAGATGGCCAAAATATTTACTGCAGAAGAACTTGAGAAGGCCACAAACAATTATCATGAAAGCAGAGTCCTTGGTGAAGGAGGTTGTGGAATAGTTTACAAGGGAATATTGCAGAATGACAGAACGGTTGCCATAAAGAAGCCCAAAGTTGGTAACTCATCCCACAGTACTACCCCAACCCACTGCACTCCCAGTCAGCAGTTTGTTAATGAAGTGATTATTCTTTCACAAATCAACCACATAAATGTGGTGAGGTTATTGGGTTGTTGCTTGGAGACATCGGTGCCTATACTCGTTTATGAGTTCATCACTAATGGCACCCTTTTTAAGCACCTTCATGGAGATAAAAGGGGAAAAAGATCATCACCACCACTTTTTTGGGATTTACGATTAAAGATAGCAACAGAAACTGCAGGTGCATTGGCATACTTACACTCCTCCACTTCGACGCCAATATTACATCGAGATGTGAAGACAATGAACATACTACTAGATGAAAACTACACTGCAAAAGTCGCTGACTTTGGAGCTTCACAATTGATTCGACCTCTTGATGAAAAGCAAATGACAACTTTTGTGCAAGGGACACTCGGATACTTGGACCCTGAATATTTTCACTCGGATGAATTTACAGAAAAAAGCGACGTCTATAGCTTTGGAGTTGTCCTAGTGGAGCTACTGACAAGTAAAAAGGCATTTTCTTTTGCAAGGCCAGATGCAGAGAGAAACCTTTCAAAACTGTTTGTTTCTTCGGTGGAAGACGGTCGCTTGAAGGAAATTCTTGACAATGACATGGTCGATGAGGCAAATATTAATGATACAATGGTACTAGAAAATGTGGCTTATCTGGCAAAGAGATGTTTGAGAGTAAAAGGGGACGAAAGGCCTACTATGAAAGAAGTAGCCATGGAGCTAGAGTGTTTATATAAAGGATTGAGTTCTATTTATGATATGACACATAAGCATTACTTTATTTGTCAAGACGAGACTGATGAGGACTTGCTGGGATCATCAACTTCAAATACTGCTGACGTTGCTGCAGATGTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

769

Amino Acids

85.07

Weight (kDa)

5.6

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 101 1.1e-06 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 437 - 720 4.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 440 - 724 5.4e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018813)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10620
rosa_chinensis RchiOBHm_Chr5g0017331
rosa_laevigata RLG00000032274
rosa_multiflora Rmu_co8169364.1_g000001 Rmu_sc0005223.1_g000006 Rmu_sc0005223.1_g000026 Rmu_sc0005319.1_g000009
rosa_roxburghii Rroxscaffold_1G00060030
rosa_rugosa Rorug05G0034000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1661
AatII GACGTC 1 cut(s) 1905
Acc36I ACCTGC 2 cut(s) 162, 1661
AccB1I GGYRCC 3 cut(s) 539, 1540, 1574
AccI GTMKAC 1 cut(s) 315
AciI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
AclWI GGATC 4 cut(s) 460, 473, 1055, 2272
AcoI YGGCCR 1 cut(s) 1263
AcsI RAATTY 3 cut(s) 595, 1883, 2034
AcuI CTGAAG 1 cut(s) 210
AcvI CACGTG 1 cut(s) 867
AcyI GRCGYC 2 cut(s) 1706, 1902
AfaI GTAC 8 cut(s) 18, 64, 181, 662, 755, 1181, 1426, 2085
AfiI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
AgsI TTSAA 7 cut(s) 576, 1075, 1192, 1208, 1992, 2029, 2277
AhlI ACTAGT 1 cut(s) 182
AjnI CCWGG 3 cut(s) 468, 940, 1042
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AleI CACNNNNGTG 1 cut(s) 782
AluBI AGCT 6 cut(s) 824, 1237, 1787, 1911, 1933, 2170
AluI AGCT 6 cut(s) 824, 1237, 1787, 1911, 1933, 2170
Alw26I GTCTC 3 cut(s) 335, 1526, 2237
AlwI GGATC 4 cut(s) 460, 473, 1055, 2272
AlwNI CAGNNNCTG 1 cut(s) 1667
Ama87I CYCGRG 1 cut(s) 580
AoxI GGCC 5 cut(s) 472, 1263, 1296, 1967, 2141
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 6 cut(s) 47, 102, 364, 763, 1011, 2294
ApoI RAATTY 3 cut(s) 595, 1883, 2034
AseI ATTAAT 2 cut(s) 789, 2070
Asp700I GAANNNNTTC 2 cut(s) 1869, 1987
AspS9I GGNCC 5 cut(s) 472, 473, 769, 879, 1858
AsuHPI GGTGA 7 cut(s) 119, 228, 237, 796, 1343, 1519, 1614
AvaI CYCGRG 1 cut(s) 580
AvaII GGWCC 3 cut(s) 769, 879, 1858
BaeGI GKGCMC 1 cut(s) 476
BaeI ACNNNNGTAYC 2 cut(s) 2067, 2100
BalI TGGCCA 1 cut(s) 1265
BamHI GGATCC 1 cut(s) 465
BanI GGYRCC 3 cut(s) 539, 1540, 1574
BanII GRGCYC 1 cut(s) 476
BauI CACGAG 1 cut(s) 217
BbrPI CACGTG 1 cut(s) 867
BbsI GAAGAC 3 cut(s) 1082, 1736, 2022
BbvI GCAGC 6 cut(s) 34, 89, 351, 750, 998, 2281
BccI CCATC 3 cut(s) 903, 965, 1255
BceAI ACGGC 4 cut(s) 392, 497, 703, 796
BcgI CGANNNNNNTGC 2 cut(s) 571, 605
BciT130I CCWGG 3 cut(s) 470, 942, 1044
BciVI GTATCC 1 cut(s) 1844
BclI TGATCA 1 cut(s) 484
BcoDI GTCTC 3 cut(s) 335, 1526, 2237
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 6 cut(s) 183, 917, 1748, 1925, 2087, 2171
BfmI CTRYAG 5 cut(s) 1012, 1278, 1668, 1906, 2295
BfuAI ACCTGC 2 cut(s) 162, 1661
BfuI GTATCC 1 cut(s) 1844
BisI GCNGC 9 cut(s) 45, 48, 103, 328, 365, 505, 764, 1012, 2295
BlsI GCNGC 9 cut(s) 46, 49, 104, 329, 366, 506, 765, 1013, 2296
BmcAI AGTACT 1 cut(s) 1426
Bme1390I CCNGG 3 cut(s) 470, 942, 1044
Bme18I GGWCC 3 cut(s) 769, 879, 1858
BmeT110I CYCGRG 1 cut(s) 580
BmgT120I GGNCC 5 cut(s) 472, 473, 769, 879, 1858
BmiI GGNNCC 7 cut(s) 467, 474, 541, 771, 1542, 1576, 1860
BmrFI CCNGG 3 cut(s) 470, 942, 1044
BmrI ACTGGG 1 cut(s) 1443
BmsI GCATC 4 cut(s) 630, 922, 1124, 1963
BmuI ACTGGG 1 cut(s) 1443
BpiI GAAGAC 3 cut(s) 1082, 1736, 2022
BpuEI CTTGAG 1 cut(s) 1310
BsaAI YACGTR 1 cut(s) 867
BsaBI GATNNNNATC 2 cut(s) 483, 1065
BsaHI GRCGYC 2 cut(s) 1706, 1902
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 4 cut(s) 469, 949, 1327, 2163
BsaXI ACNNNNNCTCC 7 cut(s) 30, 208, 238, 1676, 1706, 2159, 2189
Bsc4I CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
Bse118I RCCGGY 1 cut(s) 930
Bse1I ACTGG 1 cut(s) 1449
Bse3DI GCAATG 2 cut(s) 202, 562
Bse8I GATNNNNATC 2 cut(s) 483, 1065
BseBI CCWGG 3 cut(s) 470, 942, 1044
BseDI CCNNGG 4 cut(s) 469, 949, 1327, 2163
BseGI GGATG 4 cut(s) 811, 914, 1415, 1885
BseJI GATNNNNATC 2 cut(s) 483, 1065
BseLI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
BseMI GCAATG 2 cut(s) 202, 562
BseMII CTCAG 3 cut(s) 216, 282, 1076
BseNI ACTGG 1 cut(s) 1449
BseRI GAGGAG 1 cut(s) 1684
BseSI GKGCMC 1 cut(s) 476
BseXI GCAGC 6 cut(s) 34, 89, 351, 750, 998, 2281
BseYI CCCAGC 1 cut(s) 2260
BsgI GTGCAG 2 cut(s) 57, 1426
Bsh1285I CGRYCG 3 cut(s) 100, 334, 2023
BshFI GGCC 5 cut(s) 474, 1265, 1298, 1969, 2143
BshNI GGYRCC 3 cut(s) 539, 1540, 1574
BsiEI CGRYCG 3 cut(s) 100, 334, 2023
BsiHKCI CYCGRG 1 cut(s) 580
BsiSI CCGG 2 cut(s) 459, 931
BslFI GGGAC 5 cut(s) 78, 438, 755, 1855, 2147
BslI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
BsmAI GTCTC 3 cut(s) 335, 1526, 2237
BsmFI GGGAC 5 cut(s) 78, 438, 755, 1855, 2147
BsnI GGCC 5 cut(s) 474, 1265, 1298, 1969, 2143
Bso31I GGTCTC 1 cut(s) 335
BsoBI CYCGRG 1 cut(s) 580
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 1 cut(s) 476
Bsp143I GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
Bsp19I CCATGG 1 cut(s) 2163
BspACI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
BspANI GGCC 5 cut(s) 474, 1265, 1298, 1969, 2143
BspCNI CTCAG 3 cut(s) 215, 283, 1077
BspHI TCATGA 1 cut(s) 1312
BspLI GGNNCC 7 cut(s) 467, 474, 541, 771, 1542, 1576, 1860
BspMAI CTGCAG 4 cut(s) 1016, 1282, 1672, 2299
BspMI ACCTGC 2 cut(s) 162, 1661
BspPI GGATC 4 cut(s) 460, 473, 1055, 2272
BspT107I GGYRCC 3 cut(s) 539, 1540, 1574
BspTNI GGTCTC 1 cut(s) 335
BsrDI GCAATG 2 cut(s) 202, 562
BsrFI RCCGGY 1 cut(s) 930
BsrI ACTGG 1 cut(s) 1449
BssAI RCCGGY 1 cut(s) 930
BssECI CCNNGG 4 cut(s) 469, 949, 1327, 2163
BssMI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
BssNAI GTATAC 1 cut(s) 316
BssNI GRCGYC 2 cut(s) 1706, 1902
BssSI CACGAG 1 cut(s) 217
BssT1I CCWWGG 3 cut(s) 949, 1327, 2163
Bst1107I GTATAC 1 cut(s) 316
Bst2BI CACGAG 1 cut(s) 217
Bst2UI CCWGG 3 cut(s) 470, 942, 1044
BstACI GRCGYC 2 cut(s) 1706, 1902
BstAPI GCANNNNNTGC 1 cut(s) 546
BstBAI YACGTR 1 cut(s) 867
BstC8I GCNNGC 2 cut(s) 938, 1239
BstDEI CTNAG 4 cut(s) 202, 291, 673, 1085
BstDSI CCRYGG 1 cut(s) 2163
BstEII GGTNACC 2 cut(s) 440, 944
BstENI CCTNNNNNAGG 1 cut(s) 460
BstF5I GGATG 4 cut(s) 811, 914, 1415, 1885
BstKTI GATC 7 cut(s) 100, 259, 468, 487, 1063, 1619, 2267
BstMAI GTCTC 3 cut(s) 335, 1526, 2237
BstMBI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
BstMCI CGRYCG 3 cut(s) 100, 334, 2023
BstNI CCWGG 3 cut(s) 470, 942, 1044
BstPI GGTNACC 2 cut(s) 440, 944
BstSCI CCNGG 3 cut(s) 468, 940, 1042
BstSFI CTRYAG 5 cut(s) 1012, 1278, 1668, 1906, 2295
BstSLI GKGCMC 1 cut(s) 476
BstV1I GCAGC 6 cut(s) 34, 89, 351, 750, 998, 2281
BstV2I GAAGAC 3 cut(s) 1082, 1736, 2022
BstX2I RGATCY 1 cut(s) 465
BstXI CCANNNNNNTGG 1 cut(s) 1635
BstYI RGATCY 1 cut(s) 465
BstZ17I GTATAC 1 cut(s) 316
BsuI GTATCC 1 cut(s) 1844
BsuRI GGCC 5 cut(s) 474, 1265, 1298, 1969, 2143
BtgI CCRYGG 1 cut(s) 2163
BtsCI GGATG 4 cut(s) 811, 914, 1415, 1885
BtsI GCAGTG 2 cut(s) 1438, 1761
BtsIMutI CAGTG 4 cut(s) 135, 600, 1438, 1761
BveI ACCTGC 2 cut(s) 162, 1661
Cac8I GCNNGC 2 cut(s) 938, 1239
CaiI CAGNNNCTG 1 cut(s) 1667
CciI TCATGA 1 cut(s) 1312
Cfr10I RCCGGY 1 cut(s) 930
Cfr13I GGNCC 5 cut(s) 472, 473, 769, 879, 1858
CseI GACGC 2 cut(s) 859, 1714
Csp6I GTAC 8 cut(s) 17, 63, 180, 661, 754, 1180, 1425, 2084
CspCI CAANNNNNGTGG 4 cut(s) 9, 44, 877, 912
CviAII CATG 6 cut(s) 1183, 1250, 1313, 1595, 2050, 2164
CviQI GTAC 8 cut(s) 17, 63, 180, 661, 754, 1180, 1425, 2084
DdeI CTNAG 4 cut(s) 202, 291, 673, 1085
DpnI GATC 7 cut(s) 99, 258, 467, 486, 1062, 1618, 2266
DpnII GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
EaeI YGGCCR 1 cut(s) 1263
Eco130I CCWWGG 3 cut(s) 949, 1327, 2163
Eco147I AGGCCT 1 cut(s) 2143
Eco24I GRGCYC 1 cut(s) 476
Eco31I GGTCTC 1 cut(s) 335
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 3 cut(s) 769, 879, 1858
Eco57I CTGAAG 1 cut(s) 210
Eco72I CACGTG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 580
Eco91I GGTNACC 2 cut(s) 440, 944
EcoNI CCTNNNNNAGG 1 cut(s) 460
EcoO65I GGTNACC 2 cut(s) 440, 944
EcoRII CCWGG 3 cut(s) 468, 940, 1042
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 3 cut(s) 949, 1327, 2163
EcoT38I GRGCYC 1 cut(s) 476
ErhI CCWWGG 3 cut(s) 949, 1327, 2163
FaeI CATG 6 cut(s) 1186, 1253, 1316, 1598, 2053, 2167
FalI AAGNNNNNCTT 4 cut(s) 832, 864, 2210, 2242
FaqI GGGAC 5 cut(s) 78, 438, 755, 1855, 2147
FatI CATG 6 cut(s) 1182, 1249, 1312, 1594, 2049, 2163
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 9 cut(s) 45, 48, 103, 328, 365, 505, 764, 1012, 2295
FokI GGATG 4 cut(s) 818, 921, 1402, 1892
FriOI GRGCYC 1 cut(s) 476
Fsp4HI GCNGC 9 cut(s) 45, 48, 103, 328, 365, 505, 764, 1012, 2295
FspBI CTAG 6 cut(s) 183, 917, 1748, 1925, 2087, 2171
GluI GCNGC 9 cut(s) 45, 48, 103, 328, 365, 505, 764, 1012, 2295
GsaI CCCAGC 1 cut(s) 2264
HaeIII GGCC 5 cut(s) 474, 1265, 1298, 1969, 2143
HapII CCGG 2 cut(s) 459, 931
HgaI GACGC 2 cut(s) 859, 1714
Hin1I GRCGYC 2 cut(s) 1706, 1902
Hin1II CATG 6 cut(s) 1186, 1253, 1316, 1598, 2053, 2167
HinfI GANTC 5 cut(s) 220, 608, 955, 1323, 1798
HpaII CCGG 2 cut(s) 459, 931
HphI GGTGA 7 cut(s) 119, 228, 237, 796, 1343, 1519, 1614
Hpy166II GTNNAC 3 cut(s) 316, 587, 1354
Hpy188I TCNGA 5 cut(s) 999, 1006, 1086, 1850, 1879
Hpy188III TCNNGA 9 cut(s) 95, 217, 580, 980, 1313, 1721, 1808, 2039, 2237
Hpy8I GTNNAC 3 cut(s) 316, 587, 1354
Hpy99I CGWCG 3 cut(s) 413, 1708, 1904
HpyAV CCTTC 7 cut(s) 185, 698, 753, 1288, 1328, 1601, 2023
HpyCH4IV ACGT 3 cut(s) 866, 1902, 2289
HpyF3I CTNAG 4 cut(s) 202, 291, 673, 1085
HpySE526I ACGT 3 cut(s) 866, 1902, 2289
Hsp92I GRCGYC 2 cut(s) 1706, 1902
Hsp92II CATG 6 cut(s) 1186, 1253, 1316, 1598, 2053, 2167
Ksp22I TGATCA 1 cut(s) 484
Kzo9I GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
LmnI GCTCC 3 cut(s) 1784, 1930, 2167
Lsp1109I GCAGC 6 cut(s) 34, 89, 351, 750, 998, 2281
LweI GCATC 4 cut(s) 630, 922, 1124, 1963
MaeI CTAG 6 cut(s) 183, 917, 1748, 1925, 2087, 2171
MaeII ACGT 3 cut(s) 866, 1902, 2289
MaeIII GTNAC 8 cut(s) 149, 234, 265, 440, 514, 944, 1227, 1409
MalI GATC 7 cut(s) 99, 258, 467, 486, 1062, 1618, 2266
MboI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
MfeI CAATTG 3 cut(s) 874, 1070, 1793
MflI RGATCY 1 cut(s) 465
MhlI GDGCHC 1 cut(s) 476
MlsI TGGCCA 1 cut(s) 1265
MluCI AATT 9 cut(s) 595, 790, 874, 1070, 1095, 1306, 1793, 1883, 2034
MluNI TGGCCA 1 cut(s) 1265
MlyI GAGTC 3 cut(s) 229, 617, 1332
MmeI TCCRAC 1 cut(s) 1117
Mox20I TGGCCA 1 cut(s) 1265
MroXI GAANNNNTTC 2 cut(s) 1869, 1987
MscI TGGCCA 1 cut(s) 1265
MseI TTAA 8 cut(s) 141, 617, 789, 1094, 1464, 1584, 1649, 2070
MslI CAYNNNNRTG 6 cut(s) 782, 1500, 1502, 1593, 1722, 1878
Msp20I TGGCCA 1 cut(s) 1265
MspA1I CMGCKG 1 cut(s) 1011
MspI CCGG 2 cut(s) 459, 931
MspR9I CCNGG 3 cut(s) 470, 942, 1044
MunI CAATTG 3 cut(s) 874, 1070, 1793
MvaI CCWGG 3 cut(s) 470, 942, 1044
NcoI CCATGG 1 cut(s) 2163
NdeII GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
NlaIII CATG 6 cut(s) 1186, 1253, 1316, 1598, 2053, 2167
NlaIV GGNNCC 7 cut(s) 467, 474, 541, 771, 1542, 1576, 1860
NmuCI GTSAC 1 cut(s) 234
OliI CACNNNNGTG 1 cut(s) 782
PagI TCATGA 1 cut(s) 1312
PaqCI CACCTGC 1 cut(s) 1661
PceI AGGCCT 1 cut(s) 2143
PdmI GAANNNNTTC 2 cut(s) 1869, 1987
PfeI GAWTC 2 cut(s) 955, 1798
PflFI GACNNNGTC 1 cut(s) 2051
PkrI GCNGC 9 cut(s) 46, 49, 104, 329, 366, 506, 765, 1013, 2296
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 3 cut(s) 228, 616, 1331
PmaCI CACGTG 1 cut(s) 867
PmlI CACGTG 1 cut(s) 867
PpsI GAGTC 3 cut(s) 228, 616, 1331
Ppu21I YACGTR 1 cut(s) 867
PshBI ATTAAT 2 cut(s) 789, 2070
Psp6I CCWGG 3 cut(s) 468, 940, 1042
PspCI CACGTG 1 cut(s) 867
PspEI GGTNACC 2 cut(s) 440, 944
PspFI CCCAGC 1 cut(s) 2260
PspGI CCWGG 3 cut(s) 468, 940, 1042
PspN4I GGNNCC 7 cut(s) 467, 474, 541, 771, 1542, 1576, 1860
PspOMI GGGCCC 1 cut(s) 472
PspPI GGNCC 5 cut(s) 472, 473, 769, 879, 1858
PstI CTGCAG 4 cut(s) 1016, 1282, 1672, 2299
PstNI CAGNNNCTG 1 cut(s) 1667
PsuI RGATCY 1 cut(s) 465
PsyI GACNNNGTC 1 cut(s) 2051
PvuI CGATCG 1 cut(s) 100
RsaI GTAC 8 cut(s) 18, 64, 181, 662, 755, 1181, 1426, 2085
RsaNI GTAC 8 cut(s) 17, 63, 180, 661, 754, 1180, 1425, 2084
RseI CAYNNNNRTG 6 cut(s) 782, 1500, 1502, 1593, 1722, 1878
SaqAI TTAA 8 cut(s) 141, 617, 789, 1094, 1464, 1584, 1649, 2070
SatI GCNGC 9 cut(s) 45, 48, 103, 328, 365, 505, 764, 1012, 2295
Sau3AI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1616, 2264
Sau96I GGNCC 5 cut(s) 472, 473, 769, 879, 1858
ScaI AGTACT 1 cut(s) 1426
SchI GAGTC 3 cut(s) 229, 617, 1332
ScrFI CCNGG 3 cut(s) 470, 942, 1044
SduI GDGCHC 1 cut(s) 476
SfaNI GCATC 4 cut(s) 630, 922, 1124, 1963
SfcI CTRYAG 5 cut(s) 1012, 1278, 1668, 1906, 2295
SinI GGWCC 3 cut(s) 769, 879, 1858
SmiMI CAYNNNNRTG 6 cut(s) 782, 1500, 1502, 1593, 1722, 1878
SmlI CTYRAG 1 cut(s) 1289
SmoI CTYRAG 1 cut(s) 1289
SpeI ACTAGT 1 cut(s) 182
Sse9I AATT 9 cut(s) 595, 790, 874, 1070, 1095, 1306, 1793, 1883, 2034
SseBI AGGCCT 1 cut(s) 2143
SsiI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
SspI AATATT 6 cut(s) 24, 1272, 1365, 1713, 1868, 2068
SspMI CTAG 6 cut(s) 183, 917, 1748, 1925, 2087, 2171
StuI AGGCCT 1 cut(s) 2143
StyD4I CCNGG 3 cut(s) 468, 940, 1042
StyI CCWWGG 3 cut(s) 949, 1327, 2163
TaiI ACGT 3 cut(s) 869, 1905, 2292
TaqI TCGA 6 cut(s) 436, 1151, 1703, 1720, 1801, 2055
TasI AATT 9 cut(s) 595, 790, 874, 1070, 1095, 1306, 1793, 1883, 2034
TatI WGTACW 5 cut(s) 62, 179, 753, 1179, 1424
TauI GCSGC 3 cut(s) 47, 330, 507
TfiI GAWTC 2 cut(s) 955, 1798
Tru1I TTAA 8 cut(s) 141, 617, 789, 1094, 1464, 1584, 1649, 2070
Tru9I TTAA 8 cut(s) 141, 617, 789, 1094, 1464, 1584, 1649, 2070
TscAI CASTG 4 cut(s) 142, 607, 1445, 1768
TseFI GTSAC 1 cut(s) 234
TseI GCWGC 6 cut(s) 47, 102, 364, 763, 1011, 2294
Tsp45I GTSAC 1 cut(s) 234
TspRI CASTG 4 cut(s) 142, 607, 1445, 1768
Tth111I GACNNNGTC 1 cut(s) 2051
VpaK11BI GGWCC 3 cut(s) 769, 879, 1858
VspI ATTAAT 2 cut(s) 789, 2070
XagI CCTNNNNNAGG 1 cut(s) 460
XapI RAATTY 3 cut(s) 595, 1883, 2034
XcmI CCANNNNNNNNNTGG 1 cut(s) 1632
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 1869, 1987
XspI CTAG 6 cut(s) 183, 917, 1748, 1925, 2087, 2171
ZraI GACGTC 1 cut(s) 1903
ZrmI AGTACT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.