Rroxscaffold_1G00060030

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
82162452 .. 82165140
2689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00060030.1

Sequence Viewer

Length: 2313 bp
ATGTTAGGAGTAGTAGTACCAATATTGGTGGTGGTTGTATTAGCGGCTGCAACAAGAAGTAGTACAACATCTGCACAAGCCTTGCCTGACTGTCCCGATCGCTGCGGTGATGTGAAAATCCCATATCCATTTGGCACTGTTAAAGGTTGTTACCTGCGAGATGAGTTTTTTATCAACTGTACTAGTACTGAAGGCAATGCCTCAGTAGCAAAACTCACGGGTCCTCCCTCGTCGTCACCAACGTCACCATTGACTGATCTCATTGTTACTGACATAAGCCTTGACAACGCTGAGTTGCGTATCTTGTCCTCTGTATACCAAGACTGCGGCGACCGCAAAGAGACCCTGAACCAGTGGCTTCGGCTGCCCTCTCCTTTTGCATTTTCCACCAAAAACATCTTCTTTGCCGTCGGCTGTGCCACTTTTGCAAAATATCGAGGTTACCAATATCGTCCCTTCGGCAGGATCCTGGGCCCAGATGAAGATCAAGCCTACAACAAAAGCGGCTTTGCCGTAACCCAATGTGATGATAGTCTTGGCACCACTTGCTCTGGCAATGGCTGTTCCCAATCTTCAATCCCAAGTGGACTGCAAAATTTCACTGTTGAGGCTTTGTTAAGCATCAGCATAAATGGCTATATCCCTAATCAGGGAAAGTGGTACAGTCCATACTTAGGGTGCAACTACGGCTTCCTTGCGGAAGAAGGAAACTTCTCATTCTCCCCCAATATAAGTTTTGCCCAACTCCAAAAGTACAGAAGGCTGCTGGTCCCAACCACAACGGTGGTTAATTGGCAAATTGGGGATGAGCCGTGTGAAGAAGCTCAAAAGAGCAAGGGAAGTTATGCTTGCAAGGGAAATAGCACGTGCGTCAATTGGTCCAATGTCAATGAGGGTGGATATGGTGGATGGCATCTAGGCTACATTTGCCGGTGCTTGCCAGGTTACCAAGGGAATCCATACCTTGCAGATGGTTGTCAAGATATCAATAAGTGTCAGAGTTCAAACCGCTGCAGCACAGAAGAACTCTGCGTAAATCTACCAGGACAGTATAAATGTGATCCCAATCAATTGAAGACATCTCTGAGGTTTTTAATTTCATTTGGTATCTTTGCATCAGTCTTTGTGATAGTGGTTGGAGGTTTAGGGTCGATATATTGGGAAATGAAGAAACGAGAGTACATGATTTTGAAAGAAAAGTACTTCAAAAAAAATGGTGGTTTATTGTTACAACAGCTTGCTAATCATCATGGAGTGGAGACGGCAAAAATATTTACTGCAGAAGAACTCGAGAAGGCCACAAACAATTATCATGAAAGCAGAGTCCTTGGTGAAGGAGGTTGTGGAATAGTTTACAAGGGAATATTGCAGAATGACAGAACGGTTGCGATAAAGAAGCCCAAAGTTGGTGACTCATCCCACAGAAGTTCTACCCCAACCCACAGCACTCCCAGTCAGCAGTTTGTTAATGAAGTGATTATTCTTTCACAAATCAACCACATAAATGTGGTGAGGTTATTGGGTTGTTGCTTGGAGACATCGGTGCCTACACTCGTTTATGAGTTCATCACTAATGGCACCCTTTTTAAGCACCTTCATGGAGATAAAGAGGGAAAAAGATCATCACCACCACTTTTTTGGGATTTACGATTAAAGATAGCAACAGAAACTGCATGTGCATTGGCATACTTACACTCCTCCACTTCGACGCCAATATTACATCGGGATGTGAAGACAATGAACATACTACTAGATGAAAACTACACTGCAAAAGTCGCTGACTTTGGAGCTTCACAATTGATTCGACCTATTGATGAAAAGCAAATGACAACTTTTGTGCAAGGGACACTCGGATACTTGGACCCTGAATATTTTCACTCGGATGAATTTACAGAAAAAAGCGACGTCTATAGCTTTGGAGTTGTCCTAGTGGAGCTACTGACAAGTAAAAAGGCATTTTCTTTTGCTAGGCCAGATGCAGAGAGAAACCTTTCAAAATTGTTTGTTTCTTCGGTGGAAGACGGTCGCTTGAAGGAAATTCTTGACAATGACATGGTCGATGGGGCAAATATTAATGATACGATGGTACTAGAAAATGTGGCTTATCTGGCAAAGAGATGTTTGAGAGTAAAAGGGAACGAAAGGCCTACTATGAAAGAAGTAGCCATGGAGCTAGAGTGTTTATATAAAGGATTGAGTCCTATTTATGATATGACACATAAGCATTACGTTATTTGTCAAGACGAGACTGATGAGGACTTGCTGGGATCATCAACTTCAAATACTGCTGACGTTGCTGCAGATGTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

770

Amino Acids

85.09

Weight (kDa)

5.8

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 101 8.6e-07 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 437 - 721 1.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 440 - 725 4.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018813)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1908
Acc36I ACCTGC 1 cut(s) 162
AccB1I GGYRCC 3 cut(s) 539, 1543, 1577
AccI GTMKAC 1 cut(s) 315
AciI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
AclWI GGATC 4 cut(s) 460, 473, 1055, 2275
AcsI RAATTY 3 cut(s) 595, 1886, 2037
AcuI CTGAAG 1 cut(s) 210
AcvI CACGTG 1 cut(s) 867
AcyI GRCGYC 2 cut(s) 1709, 1905
AfaI GTAC 9 cut(s) 18, 64, 181, 187, 662, 755, 1181, 1202, 2088
AfiI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
AgsI TTSAA 8 cut(s) 576, 1005, 1075, 1192, 1207, 1995, 2032, 2280
AhlI ACTAGT 1 cut(s) 182
AjnI CCWGG 3 cut(s) 468, 940, 1042
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AleI CACNNNNGTG 1 cut(s) 782
AluBI AGCT 6 cut(s) 824, 1237, 1790, 1914, 1936, 2173
AluI AGCT 6 cut(s) 824, 1237, 1790, 1914, 1936, 2173
Alw26I GTCTC 4 cut(s) 335, 1253, 1529, 2240
AlwI GGATC 4 cut(s) 460, 473, 1055, 2275
AlwNI CAGNNNCTG 1 cut(s) 1670
Ama87I CYCGRG 1 cut(s) 1289
AoxI GGCC 4 cut(s) 472, 1296, 1970, 2144
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 7 cut(s) 47, 102, 364, 763, 1011, 1014, 2297
ApoI RAATTY 3 cut(s) 595, 1886, 2037
AseI ATTAAT 1 cut(s) 2073
Asp700I GAANNNNTTC 2 cut(s) 1872, 1990
AspS9I GGNCC 6 cut(s) 221, 472, 473, 769, 879, 1861
AsuHPI GGTGA 7 cut(s) 119, 228, 237, 1343, 1421, 1522, 1617
AvaI CYCGRG 1 cut(s) 1289
AvaII GGWCC 4 cut(s) 221, 769, 879, 1861
BaeGI GKGCMC 1 cut(s) 476
BaeI ACNNNNGTAYC 2 cut(s) 2070, 2103
BamHI GGATCC 1 cut(s) 465
BanI GGYRCC 3 cut(s) 539, 1543, 1577
BanII GRGCYC 1 cut(s) 476
BbrPI CACGTG 1 cut(s) 867
BbsI GAAGAC 3 cut(s) 1082, 1739, 2025
BbvI GCAGC 7 cut(s) 34, 89, 351, 750, 998, 1026, 2284
BccI CCATC 4 cut(s) 903, 965, 2054, 2077
BceAI ACGGC 5 cut(s) 392, 497, 703, 796, 1278
BciT130I CCWGG 3 cut(s) 470, 942, 1044
BciVI GTATCC 1 cut(s) 1847
BcoDI GTCTC 4 cut(s) 335, 1253, 1529, 2240
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 7 cut(s) 183, 917, 1751, 1928, 1968, 2090, 2174
BfmI CTRYAG 4 cut(s) 1012, 1278, 1909, 2298
BfuAI ACCTGC 1 cut(s) 162
BfuI GTATCC 1 cut(s) 1847
BmcAI AGTACT 2 cut(s) 187, 1202
Bme1390I CCNGG 3 cut(s) 470, 942, 1044
Bme18I GGWCC 4 cut(s) 221, 769, 879, 1861
BmeT110I CYCGRG 1 cut(s) 1289
BmgT120I GGNCC 6 cut(s) 221, 472, 473, 769, 879, 1861
BmiI GGNNCC 8 cut(s) 222, 467, 474, 541, 771, 1545, 1579, 1863
BmrFI CCNGG 3 cut(s) 470, 942, 1044
BmrI ACTGGG 1 cut(s) 1446
BmsI GCATC 4 cut(s) 630, 922, 1124, 1966
BmuI ACTGGG 1 cut(s) 1446
BpiI GAAGAC 3 cut(s) 1082, 1739, 2025
BsaAI YACGTR 1 cut(s) 867
BsaBI GATNNNNATC 2 cut(s) 483, 1065
BsaHI GRCGYC 2 cut(s) 1709, 1905
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 4 cut(s) 469, 949, 1327, 2166
BsaXI ACNNNNNCTCC 7 cut(s) 30, 208, 238, 1679, 1709, 2162, 2192
Bsc4I CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
Bse118I RCCGGY 1 cut(s) 930
Bse1I ACTGG 2 cut(s) 352, 1452
Bse3DI GCAATG 2 cut(s) 202, 562
Bse8I GATNNNNATC 2 cut(s) 483, 1065
BseBI CCWGG 3 cut(s) 470, 942, 1044
BseDI CCNNGG 4 cut(s) 469, 949, 1327, 2166
BseGI GGATG 5 cut(s) 811, 914, 1415, 1732, 1888
BseJI GATNNNNATC 2 cut(s) 483, 1065
BseLI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
BseMI GCAATG 2 cut(s) 202, 562
BseMII CTCAG 3 cut(s) 216, 282, 1076
BseNI ACTGG 2 cut(s) 352, 1452
BseRI GAGGAG 1 cut(s) 1687
BseSI GKGCMC 1 cut(s) 476
BseXI GCAGC 7 cut(s) 34, 89, 351, 750, 998, 1026, 2284
BseYI CCCAGC 1 cut(s) 2263
BsgI GTGCAG 1 cut(s) 57
Bsh1285I CGRYCG 3 cut(s) 100, 334, 2026
BshFI GGCC 4 cut(s) 474, 1298, 1972, 2146
BshNI GGYRCC 3 cut(s) 539, 1543, 1577
BsiEI CGRYCG 3 cut(s) 100, 334, 2026
BsiHKCI CYCGRG 1 cut(s) 1289
BsiSI CCGG 1 cut(s) 931
BslFI GGGAC 4 cut(s) 78, 438, 755, 1858
BslI CCNNNNNNNGG 5 cut(s) 462, 649, 650, 674, 1406
BsmAI GTCTC 4 cut(s) 335, 1253, 1529, 2240
BsmBI CGTCTC 1 cut(s) 1253
BsmFI GGGAC 4 cut(s) 78, 438, 755, 1858
BsnI GGCC 4 cut(s) 474, 1298, 1972, 2146
Bso31I GGTCTC 1 cut(s) 335
BsoBI CYCGRG 1 cut(s) 1289
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 1 cut(s) 476
Bsp143I GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
Bsp19I CCATGG 1 cut(s) 2166
BspACI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
BspANI GGCC 4 cut(s) 474, 1298, 1972, 2146
BspCNI CTCAG 3 cut(s) 215, 283, 1077
BspHI TCATGA 1 cut(s) 1312
BspLI GGNNCC 8 cut(s) 222, 467, 474, 541, 771, 1545, 1579, 1863
BspMAI CTGCAG 3 cut(s) 1016, 1282, 2302
BspMI ACCTGC 1 cut(s) 162
BspPI GGATC 4 cut(s) 460, 473, 1055, 2275
BspT107I GGYRCC 3 cut(s) 539, 1543, 1577
BspTNI GGTCTC 1 cut(s) 335
BsrDI GCAATG 2 cut(s) 202, 562
BsrFI RCCGGY 1 cut(s) 930
BsrI ACTGG 2 cut(s) 352, 1452
BssAI RCCGGY 1 cut(s) 930
BssECI CCNNGG 4 cut(s) 469, 949, 1327, 2166
BssMI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
BssNAI GTATAC 1 cut(s) 316
BssNI GRCGYC 2 cut(s) 1709, 1905
BssT1I CCWWGG 3 cut(s) 949, 1327, 2166
Bst1107I GTATAC 1 cut(s) 316
Bst2UI CCWGG 3 cut(s) 470, 942, 1044
Bst4CI ACNGT 9 cut(s) 92, 139, 179, 604, 665, 784, 1050, 1384, 2024
BstACI GRCGYC 2 cut(s) 1709, 1905
BstAPI GCANNNNNTGC 1 cut(s) 546
BstBAI YACGTR 1 cut(s) 867
BstC8I GCNNGC 3 cut(s) 850, 938, 1239
BstDEI CTNAG 4 cut(s) 202, 291, 673, 1085
BstDSI CCRYGG 1 cut(s) 2166
BstEII GGTNACC 2 cut(s) 440, 944
BstENI CCTNNNNNAGG 1 cut(s) 460
BstF5I GGATG 5 cut(s) 811, 914, 1415, 1732, 1888
BstKTI GATC 7 cut(s) 100, 259, 468, 487, 1063, 1622, 2270
BstMAI GTCTC 4 cut(s) 335, 1253, 1529, 2240
BstMBI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
BstMCI CGRYCG 3 cut(s) 100, 334, 2026
BstNI CCWGG 3 cut(s) 470, 942, 1044
BstNSI RCATGY 1 cut(s) 1677
BstPI GGTNACC 2 cut(s) 440, 944
BstSCI CCNGG 3 cut(s) 468, 940, 1042
BstSFI CTRYAG 4 cut(s) 1012, 1278, 1909, 2298
BstSLI GKGCMC 1 cut(s) 476
BstV1I GCAGC 7 cut(s) 34, 89, 351, 750, 998, 1026, 2284
BstV2I GAAGAC 3 cut(s) 1082, 1739, 2025
BstX2I RGATCY 1 cut(s) 465
BstXI CCANNNNNNTGG 2 cut(s) 784, 1638
BstYI RGATCY 1 cut(s) 465
BstZ17I GTATAC 1 cut(s) 316
BsuI GTATCC 1 cut(s) 1847
BsuRI GGCC 4 cut(s) 474, 1298, 1972, 2146
BtgI CCRYGG 1 cut(s) 2166
BtsCI GGATG 5 cut(s) 811, 914, 1415, 1732, 1888
BtsI GCAGTG 1 cut(s) 1764
BtsIMutI CAGTG 4 cut(s) 135, 359, 600, 1764
BveI ACCTGC 1 cut(s) 162
Cac8I GCNNGC 3 cut(s) 850, 938, 1239
CaiI CAGNNNCTG 1 cut(s) 1670
CciI TCATGA 1 cut(s) 1312
Cfr10I RCCGGY 1 cut(s) 930
Cfr13I GGNCC 6 cut(s) 221, 472, 473, 769, 879, 1861
CseI GACGC 2 cut(s) 859, 1717
Csp6I GTAC 9 cut(s) 17, 63, 180, 186, 661, 754, 1180, 1201, 2087
CspCI CAANNNNNGTGG 4 cut(s) 9, 44, 877, 912
CviAII CATG 7 cut(s) 1183, 1250, 1313, 1598, 1674, 2053, 2167
CviQI GTAC 9 cut(s) 17, 63, 180, 186, 661, 754, 1180, 1201, 2087
DdeI CTNAG 4 cut(s) 202, 291, 673, 1085
DpnI GATC 7 cut(s) 99, 258, 467, 486, 1062, 1621, 2269
DpnII GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
Eco130I CCWWGG 3 cut(s) 949, 1327, 2166
Eco147I AGGCCT 1 cut(s) 2146
Eco24I GRGCYC 1 cut(s) 476
Eco31I GGTCTC 1 cut(s) 335
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 4 cut(s) 221, 769, 879, 1861
Eco57I CTGAAG 1 cut(s) 210
Eco72I CACGTG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 1289
Eco91I GGTNACC 2 cut(s) 440, 944
EcoNI CCTNNNNNAGG 1 cut(s) 460
EcoO109I RGGNCCY 1 cut(s) 221
EcoO65I GGTNACC 2 cut(s) 440, 944
EcoRII CCWGG 3 cut(s) 468, 940, 1042
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 3 cut(s) 949, 1327, 2166
EcoT38I GRGCYC 1 cut(s) 476
ErhI CCWWGG 3 cut(s) 949, 1327, 2166
Esp3I CGTCTC 1 cut(s) 1253
FaeI CATG 7 cut(s) 1186, 1253, 1316, 1601, 1677, 2056, 2170
FalI AAGNNNNNCTT 2 cut(s) 832, 864
FaqI GGGAC 4 cut(s) 78, 438, 755, 1858
FatI CATG 7 cut(s) 1182, 1249, 1312, 1597, 1673, 2052, 2166
FblI GTMKAC 1 cut(s) 315
FokI GGATG 5 cut(s) 818, 921, 1402, 1739, 1895
FriOI GRGCYC 1 cut(s) 476
FspBI CTAG 7 cut(s) 183, 917, 1751, 1928, 1968, 2090, 2174
GsaI CCCAGC 1 cut(s) 2267
HaeIII GGCC 4 cut(s) 474, 1298, 1972, 2146
HapII CCGG 1 cut(s) 931
HgaI GACGC 2 cut(s) 859, 1717
Hin1I GRCGYC 2 cut(s) 1709, 1905
Hin1II CATG 7 cut(s) 1186, 1253, 1316, 1601, 1677, 2056, 2170
HinfI GANTC 5 cut(s) 955, 1323, 1412, 1801, 2197
HpaII CCGG 1 cut(s) 931
HphI GGTGA 7 cut(s) 119, 228, 237, 1343, 1421, 1522, 1617
Hpy166II GTNNAC 3 cut(s) 316, 587, 1354
Hpy188I TCNGA 4 cut(s) 999, 1086, 1853, 1882
Hpy188III TCNNGA 7 cut(s) 95, 980, 1291, 1313, 1724, 2042, 2240
Hpy8I GTNNAC 3 cut(s) 316, 587, 1354
Hpy99I CGWCG 4 cut(s) 235, 413, 1711, 1907
HpyAV CCTTC 8 cut(s) 185, 466, 698, 753, 1288, 1328, 1604, 2026
HpyCH4III ACNGT 9 cut(s) 92, 139, 179, 604, 665, 784, 1050, 1384, 2024
HpyCH4IV ACGT 5 cut(s) 242, 866, 1905, 2229, 2292
HpyF3I CTNAG 4 cut(s) 202, 291, 673, 1085
HpySE526I ACGT 5 cut(s) 242, 866, 1905, 2229, 2292
Hsp92I GRCGYC 2 cut(s) 1709, 1905
Hsp92II CATG 7 cut(s) 1186, 1253, 1316, 1601, 1677, 2056, 2170
Kzo9I GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
LmnI GCTCC 3 cut(s) 1787, 1933, 2170
Lsp1109I GCAGC 7 cut(s) 34, 89, 351, 750, 998, 1026, 2284
LweI GCATC 4 cut(s) 630, 922, 1124, 1966
MaeI CTAG 7 cut(s) 183, 917, 1751, 1928, 1968, 2090, 2174
MaeII ACGT 5 cut(s) 242, 866, 1905, 2229, 2292
MaeIII GTNAC 9 cut(s) 149, 234, 243, 265, 440, 514, 944, 1227, 1409
MalI GATC 7 cut(s) 99, 258, 467, 486, 1062, 1621, 2269
MboI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
MfeI CAATTG 3 cut(s) 874, 1070, 1796
MflI RGATCY 1 cut(s) 465
MhlI GDGCHC 1 cut(s) 476
MlyI GAGTC 3 cut(s) 1332, 1406, 2206
MmeI TCCRAC 1 cut(s) 1117
MroXI GAANNNNTTC 2 cut(s) 1872, 1990
MseI TTAA 8 cut(s) 141, 617, 789, 1094, 1467, 1587, 1652, 2073
MslI CAYNNNNRTG 6 cut(s) 782, 1503, 1505, 1596, 1725, 1881
MspA1I CMGCKG 1 cut(s) 1011
MspI CCGG 1 cut(s) 931
MspR9I CCNGG 3 cut(s) 470, 942, 1044
MunI CAATTG 3 cut(s) 874, 1070, 1796
MvaI CCWGG 3 cut(s) 470, 942, 1044
NcoI CCATGG 1 cut(s) 2166
NdeII GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
NlaIII CATG 7 cut(s) 1186, 1253, 1316, 1601, 1677, 2056, 2170
NlaIV GGNNCC 8 cut(s) 222, 467, 474, 541, 771, 1545, 1579, 1863
NmuCI GTSAC 3 cut(s) 234, 243, 1409
NspI RCATGY 1 cut(s) 1677
OliI CACNNNNGTG 1 cut(s) 782
PaeR7I CTCGAG 1 cut(s) 1289
PagI TCATGA 1 cut(s) 1312
PceI AGGCCT 1 cut(s) 2146
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PdmI GAANNNNTTC 2 cut(s) 1872, 1990
PfeI GAWTC 2 cut(s) 955, 1801
PflFI GACNNNGTC 1 cut(s) 2054
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 3 cut(s) 1331, 1406, 2205
PmaCI CACGTG 1 cut(s) 867
PmlI CACGTG 1 cut(s) 867
PpsI GAGTC 3 cut(s) 1331, 1406, 2205
Ppu21I YACGTR 1 cut(s) 867
PpuMI RGGWCCY 1 cut(s) 221
PshBI ATTAAT 1 cut(s) 2073
Psp5II RGGWCCY 1 cut(s) 221
Psp6I CCWGG 3 cut(s) 468, 940, 1042
PspCI CACGTG 1 cut(s) 867
PspEI GGTNACC 2 cut(s) 440, 944
PspFI CCCAGC 1 cut(s) 2263
PspGI CCWGG 3 cut(s) 468, 940, 1042
PspN4I GGNNCC 8 cut(s) 222, 467, 474, 541, 771, 1545, 1579, 1863
PspOMI GGGCCC 1 cut(s) 472
PspPI GGNCC 6 cut(s) 221, 472, 473, 769, 879, 1861
PspPPI RGGWCCY 1 cut(s) 221
PstI CTGCAG 3 cut(s) 1016, 1282, 2302
PstNI CAGNNNCTG 1 cut(s) 1670
PsuI RGATCY 1 cut(s) 465
PsyI GACNNNGTC 1 cut(s) 2054
PvuI CGATCG 1 cut(s) 100
RsaI GTAC 9 cut(s) 18, 64, 181, 187, 662, 755, 1181, 1202, 2088
RsaNI GTAC 9 cut(s) 17, 63, 180, 186, 661, 754, 1180, 1201, 2087
RseI CAYNNNNRTG 6 cut(s) 782, 1503, 1505, 1596, 1725, 1881
SaqAI TTAA 8 cut(s) 141, 617, 789, 1094, 1467, 1587, 1652, 2073
Sau3AI GATC 7 cut(s) 97, 256, 465, 484, 1060, 1619, 2267
Sau96I GGNCC 6 cut(s) 221, 472, 473, 769, 879, 1861
ScaI AGTACT 2 cut(s) 187, 1202
SchI GAGTC 3 cut(s) 1332, 1406, 2206
ScrFI CCNGG 3 cut(s) 470, 942, 1044
SduI GDGCHC 1 cut(s) 476
SfaNI GCATC 4 cut(s) 630, 922, 1124, 1966
SfcI CTRYAG 4 cut(s) 1012, 1278, 1909, 2298
Sfr274I CTCGAG 1 cut(s) 1289
SinI GGWCC 4 cut(s) 221, 769, 879, 1861
SlaI CTCGAG 1 cut(s) 1289
SmiMI CAYNNNNRTG 6 cut(s) 782, 1503, 1505, 1596, 1725, 1881
SmlI CTYRAG 1 cut(s) 1289
SmoI CTYRAG 1 cut(s) 1289
SpeI ACTAGT 1 cut(s) 182
SseBI AGGCCT 1 cut(s) 2146
SsiI CCGC 7 cut(s) 44, 105, 327, 334, 504, 698, 1009
SspI AATATT 6 cut(s) 24, 1272, 1365, 1716, 1871, 2071
SspMI CTAG 7 cut(s) 183, 917, 1751, 1928, 1968, 2090, 2174
StuI AGGCCT 1 cut(s) 2146
StyD4I CCNGG 3 cut(s) 468, 940, 1042
StyI CCWWGG 3 cut(s) 949, 1327, 2166
TaaI ACNGT 9 cut(s) 92, 139, 179, 604, 665, 784, 1050, 1384, 2024
TaiI ACGT 5 cut(s) 245, 869, 1908, 2232, 2295
TaqI TCGA 6 cut(s) 436, 1151, 1290, 1706, 1804, 2058
TatI WGTACW 6 cut(s) 62, 179, 185, 753, 1179, 1200
TauI GCSGC 3 cut(s) 47, 330, 507
TfiI GAWTC 2 cut(s) 955, 1801
Tru1I TTAA 8 cut(s) 141, 617, 789, 1094, 1467, 1587, 1652, 2073
Tru9I TTAA 8 cut(s) 141, 617, 789, 1094, 1467, 1587, 1652, 2073
TscAI CASTG 4 cut(s) 142, 359, 607, 1771
TseFI GTSAC 3 cut(s) 234, 243, 1409
TseI GCWGC 7 cut(s) 47, 102, 364, 763, 1011, 1014, 2297
Tsp45I GTSAC 3 cut(s) 234, 243, 1409
TspRI CASTG 4 cut(s) 142, 359, 607, 1771
Tth111I GACNNNGTC 1 cut(s) 2054
VpaK11BI GGWCC 4 cut(s) 221, 769, 879, 1861
VspI ATTAAT 1 cut(s) 2073
XagI CCTNNNNNAGG 1 cut(s) 460
XapI RAATTY 3 cut(s) 595, 1886, 2037
XceI RCATGY 1 cut(s) 1677
XcmI CCANNNNNNNNNTGG 1 cut(s) 1635
XhoI CTCGAG 1 cut(s) 1289
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 1872, 1990
XspI CTAG 7 cut(s) 183, 917, 1751, 1928, 1968, 2090, 2174
ZraI GACGTC 1 cut(s) 1906
ZrmI AGTACT 2 cut(s) 187, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.