FvH4_3g13040
ERF Family

Protein kinase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0014690
Physical Location & Seq
Forward (+)
7799882 .. 7803023
3142 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g13040.t1

Sequence Viewer

Length: 2313 bp
ATGAAGTTAGGTTATCAGCAGAGTGATTTTGATGCATCTCTTGAGGAAATTTTGAATGGGAGTTTCAGGAAGTTTACATCTGGCTTGTTGCAAAATGATTTGGAGTTATCTCCAGGCCATAGCTCAAATGGGAGTAGTTTTCGGAGGTCGGGTTCTATTATGTCCACACATAGTGTGTCTGGCAATTCAGCTTCAAGCAAGTTTGCTCCTTCTAAGAAAAGAGTGTTTAAGGGTTTAAAAGACTATGCTAGGAAACTTGTGGACCTGGAACTGTTCACACATAGTCTTGAAGATTGGGTTTTGGAGAATTCGTGCGAAGATTCAGCCAATGGGGAGCAGGCTTTTAGTGCTCCATTTATGATGGATGAATTGCGCAAGCTGGATTTGGCGTTGGAGGGTGTTTTGTTTCAGCAACTACTGCGAATGCCATGTTCGAGTTATGTTTCTGGTGATGCAAATGAAGATGAGTATCTTGCACTGGAGGACTTCCTTCATGCTATAGTGAGTGGTTTATGGCATGCATTTTGGCATAAAAGAGGACAGCCGCCAATGTCTGTAACTTGTCCACGCAGTCTTGGATCAAAGTTTTATACTGTGGAAAAGGCGATAGCAAGGGGAAGGCTTAATGAGCTGAGTGGTTTGGCTTTGATGTCGAAAAATGGGAGTGATAAGCAAGTACAGTGGGATCAGATTATGGAGTTTGCTCTATTTAAGCAAGATATATTGGCAGGTAATGAGTTGAAATTATCGTCTCCCATTATTTGTGAAGCCCTCTTTTATGGTTTTCATATACTTGTCTCTAGGTGTTTGAACAAGAGTAGACCTGCAAATAGCAGTTCTGTTTTCGTTTTGGTATTAGATTCAAAGTATGGAGGTGTAGTGAAAGTAGGTGGTGATCTTAGCACACTCGAATTAAACTCAAGTAACCCTTACAGATCTGTGGCTGAATGGATTAAAAATCATGCTGAAGTCAGTGTTTCACCAGTGGACCGCATATGGAACAAGTTCGGAAATGCAAATTGGGGTGACCTAGGAACCCTACAGATACTTTTGGCGACTTACAACTCCATTGTGCAATGGAATGGACCACCAAGGAAGTCAATAGCCTCGTTAGTTTCAGATCATAGCCTTCGTCTTCAGAAGCGTAGGATGGAGTTCTGCCTTGCAGAGAATGAGAATGGTCTGGTTCCCTACCAACAATCTAGCCACCAGCAAGGACAAGGAGAGATTGTTGAACTTGAGCAAACTAGTAGTCAAGCTTTCAAAAGCAAAGCTTCACGTTTAAATCTCAAGCAGGGTGAGGTATTGCTACTGGAAGATCAACAGCAGGGTCAGAAAACTTTCCAAGTACAGGAGTCTCTGGTAGGAGGGAGCCATTACCTCTATAGTGCAGTTTGTCTAGATTGTCCAACAGAGTTGTTGACTTTATATGTTGGTGCCCATCCATCCAGACTTGAACCATCTTGGGAGGATATGAGTCTTTGGTACCAAGTACAAAGACAAACAAAAGTACTAAACATCTTTAAGCATCAAGGAATCACAAGTAACTATTTGCCGGAAATTTTTGCCTCTGGCAGAATTTTGCATTCTGGTCCGTGTCAAAAGCAGGCCCCCGGGGGTCGATGTGATCACCCGTGGTGTGGGACTCCTATACTGGTGACATCTCCAGTTGGTGAACCTGTTTCATATGTTGTTTCCCAAGAAGGCCCTCTTTCAGCTGAGGAGGCCATTCGCTGCTGTCGAGACTGCCTAGCTGCTCTAAGAAGTGCCGCAATGGCGAATGTCCAGCATGGTGATTTGTGTCCAGAAAACATTATTCGGGTTGTTGGTGTACAAGGTGCAAGAAACAATGTTCTTTATGTTCCAATATCATGGGGCCGTGCAGTATTGGAAGACCGAGACAGCCCAGCTATAAACTTGCAGTTTTCTTCATCTCATGCACTTCAGCATGGGAAACTTTGCCCATCATCAGATGCTGAAAGCCTTGTTTACCTCATGTTGTACATGTGTGGGGGCACTATGCAGCAGCAGGATTCAATCGAATCTGCATTGCAATGGAGAGAAACGAGCTGGGCAAAGCGCTTGATCCAACAGCAGCTCGGTGAGGTCTCAGCTCTTCTAAAGGCATTTGCTGATTATGTGGATAGCCTTTGTGGAACACCATACCCTGTTGACTACGACATATGGTTAAAAAGATTGAGCAGGGCTGTGGATGGTGGAACCGACAGAGGTAAAATGATCGAAGAAGCGACAGCTACATTGAGATTGAAAGATGTTGCCGAGTCGTCAGGAACATCTGGAGGTGGTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

771

Amino Acids

85.13

Weight (kDa)

5.96

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g13040
malus_domestica MD05G1245500.v1.1 MD10G1226800.v1.1
prunus_persica Prupe.4G118400_v2.0.a1
pyrus_communis pycom05g22160 pycom10g19070
rosa_chinensis RchiOBHm_Chr5g0021231
rosa_laevigata RLG00000032597
rosa_multiflora Rmu_sc0003392.1_g000017 Rmu_sc0004847.1_g000001
rosa_roxburghii Rroxscaffold_1G00057270
rosa_rugosa Rorug05G0065300
rosa_samantha Rh5AG154400 Rh5BG154000 Rh5CG167600 Rh5DG154500
rosa_wichuraiana Rw5G013760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 374
Acc36I ACCTGC 2 cut(s) 719, 832
Acc65I GGTACC 1 cut(s) 1485
AccB1I GGYRCC 2 cut(s) 1436, 1485
AccI GTMKAC 1 cut(s) 820
AciI CCGC 3 cut(s) 545, 991, 1770
AclWI GGATC 3 cut(s) 586, 693, 2080
AcsI RAATTY 4 cut(s) 48, 307, 1560, 1578
AcuI CTGAAG 3 cut(s) 987, 1121, 1928
AdeI CACNNNGTG 1 cut(s) 173
AfaI GTAC 7 cut(s) 678, 1350, 1487, 1494, 1512, 1833, 2003
AfeI AGCGCT 1 cut(s) 2081
AfiI CCNNNNNNNGG 2 cut(s) 1351, 1640
AflIII ACRYGT 1 cut(s) 2004
AhlI ACTAGT 1 cut(s) 1247
AjnI CCWGG 2 cut(s) 112, 264
AjuI GAANNNNNNNTTGG 2 cut(s) 1003, 1035
AloI GAACNNNNNNTCC 2 cut(s) 136, 168
Alw21I GWGCWC 1 cut(s) 352
Alw26I GTCTC 6 cut(s) 756, 802, 1362, 1737, 1893, 2113
AlwI GGATC 3 cut(s) 586, 693, 2080
AlwNI CAGNNNCTG 1 cut(s) 1976
Ama87I CYCGRG 1 cut(s) 1613
Aor51HI AGCGCT 1 cut(s) 2081
AoxI GGCC 5 cut(s) 115, 1608, 1705, 1725, 1876
ApeKI GCWGC 5 cut(s) 1734, 1754, 2023, 2026, 2095
ApoI RAATTY 4 cut(s) 48, 307, 1560, 1578
ArsI GACNNNNNNTTYG 2 cut(s) 1237, 1269
Asp700I GAANNNNTTC 2 cut(s) 1004, 1340
Asp718I GGTACC 1 cut(s) 1485
AspA2I CCTAGG 1 cut(s) 1030
AspLEI GCGC 2 cut(s) 375, 2082
AspS9I GGNCC 7 cut(s) 262, 988, 1085, 1592, 1609, 1706, 1876
AsuC2I CCSGG 2 cut(s) 1614, 1615
AvaI CYCGRG 1 cut(s) 1613
AvaII GGWCC 4 cut(s) 262, 988, 1085, 1592
AvrII CCTAGG 1 cut(s) 1030
BaeGI GKGCMC 2 cut(s) 1441, 2018
BanI GGYRCC 2 cut(s) 1436, 1485
BbsI GAAGAC 2 cut(s) 1127, 1899
Bbv12I GWGCWC 1 cut(s) 352
BbvCI CCTCAGC 1 cut(s) 1719
BbvI GCAGC 5 cut(s) 1721, 1741, 2035, 2038, 2107
BccI CCATC 7 cut(s) 355, 1144, 1449, 1453, 1468, 1972, 2207
BceAI ACGGC 1 cut(s) 1863
BciT130I CCWGG 2 cut(s) 114, 266
BclI TGATCA 1 cut(s) 1627
BcnI CCSGG 2 cut(s) 1614, 1615
BcoDI GTCTC 6 cut(s) 756, 802, 1362, 1737, 1893, 2113
BcuI ACTAGT 1 cut(s) 1247
BfaI CTAG 7 cut(s) 249, 801, 1031, 1203, 1248, 1400, 1751
BfmI CTRYAG 3 cut(s) 498, 1040, 1384
BfoI RGCGCY 1 cut(s) 2083
BfuAI ACCTGC 2 cut(s) 719, 832
BglI GCCNNNNNGGC 1 cut(s) 1775
BglII AGATCT 1 cut(s) 935
BisI GCNGC 7 cut(s) 545, 1735, 1755, 1770, 2024, 2027, 2096
BlnI CCTAGG 1 cut(s) 1030
BlsI GCNGC 7 cut(s) 546, 1736, 1756, 1771, 2025, 2028, 2097
BmcAI AGTACT 1 cut(s) 1512
Bme1390I CCNGG 4 cut(s) 114, 266, 1614, 1615
Bme18I GGWCC 4 cut(s) 262, 988, 1085, 1592
BmeT110I CYCGRG 1 cut(s) 1613
BmgT120I GGNCC 7 cut(s) 262, 988, 1085, 1592, 1609, 1706, 1876
BmiI GGNNCC 8 cut(s) 1036, 1188, 1373, 1438, 1487, 1611, 1877, 2221
BmrFI CCNGG 4 cut(s) 114, 266, 1614, 1615
BmsI GCATC 5 cut(s) 22, 44, 442, 1537, 1963
BpiI GAAGAC 2 cut(s) 1127, 1899
BpmI CTGGAG 3 cut(s) 96, 500, 1650
Bpu10I CCTNAGC 1 cut(s) 1719
BpuEI CTTGAG 4 cut(s) 62, 904, 1259, 1274
BpuMI CCSGG 2 cut(s) 1614, 1615
BsaBI GATNNNNATC 1 cut(s) 468
BsaI GGTCTC 1 cut(s) 2113
BsaJI CCNNGG 6 cut(s) 1030, 1091, 1612, 1613, 1614, 1634
BsaXI ACNNNNNCTCC 8 cut(s) 136, 166, 296, 326, 864, 894, 1215, 1245
Bsc4I CCNNNNNNNGG 2 cut(s) 1351, 1640
Bse1I ACTGG 5 cut(s) 483, 983, 1317, 1659, 1667
Bse3DI GCAATG 4 cut(s) 1082, 1779, 2048, 2060
Bse8I GATNNNNATC 1 cut(s) 468
BseBI CCWGG 2 cut(s) 114, 266
BseDI CCNNGG 6 cut(s) 1030, 1091, 1612, 1613, 1614, 1634
BseGI GGATG 5 cut(s) 370, 1155, 1441, 1445, 2218
BseJI GATNNNNATC 1 cut(s) 468
BseLI CCNNNNNNNGG 2 cut(s) 1351, 1640
BseMI GCAATG 4 cut(s) 1082, 1779, 2048, 2060
BseMII CTCAG 3 cut(s) 623, 1710, 2124
BseNI ACTGG 5 cut(s) 483, 983, 1317, 1659, 1667
BseRI GAGGAG 1 cut(s) 1736
BseSI GKGCMC 2 cut(s) 1441, 2018
BseXI GCAGC 5 cut(s) 1721, 1741, 2035, 2038, 2107
BseYI CCCAGC 2 cut(s) 1906, 2070
BsgI GTGCAG 2 cut(s) 1410, 1902
BshFI GGCC 5 cut(s) 117, 1610, 1707, 1727, 1878
BshNI GGYRCC 2 cut(s) 1436, 1485
BsiHKAI GWGCWC 1 cut(s) 352
BsiHKCI CYCGRG 1 cut(s) 1613
BsiSI CCGG 2 cut(s) 1556, 1614
BslFI GGGAC 1 cut(s) 1657
BslI CCNNNNNNNGG 2 cut(s) 1351, 1640
BsmAI GTCTC 6 cut(s) 756, 802, 1362, 1737, 1893, 2113
BsmBI CGTCTC 1 cut(s) 756
BsmFI GGGAC 1 cut(s) 1657
BsmI GAATGC 2 cut(s) 429, 1585
BsnI GGCC 5 cut(s) 117, 1610, 1707, 1727, 1878
Bso31I GGTCTC 1 cut(s) 2113
BsoBI CYCGRG 1 cut(s) 1613
Bsp1286I GDGCHC 3 cut(s) 352, 1441, 2018
Bsp1407I TGTACA 2 cut(s) 1831, 2001
Bsp143I GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
BspACI CCGC 3 cut(s) 545, 991, 1770
BspANI GGCC 5 cut(s) 117, 1610, 1707, 1727, 1878
BspCNI CTCAG 3 cut(s) 624, 1711, 2123
BspLI GGNNCC 8 cut(s) 1036, 1188, 1373, 1438, 1487, 1611, 1877, 2221
BspMI ACCTGC 2 cut(s) 719, 832
BspPI GGATC 3 cut(s) 586, 693, 2080
BspQI GCTCTTC 1 cut(s) 2121
BspT107I GGYRCC 2 cut(s) 1436, 1485
BspTNI GGTCTC 1 cut(s) 2113
BsrDI GCAATG 4 cut(s) 1082, 1779, 2048, 2060
BsrGI TGTACA 2 cut(s) 1831, 2001
BsrI ACTGG 5 cut(s) 483, 983, 1317, 1659, 1667
BssECI CCNNGG 6 cut(s) 1030, 1091, 1612, 1613, 1614, 1634
BssMI GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
BssT1I CCWWGG 2 cut(s) 1030, 1091
Bst2UI CCWGG 2 cut(s) 114, 266
Bst4CI ACNGT 3 cut(s) 273, 595, 681
Bst6I CTCTTC 1 cut(s) 2121
BstAPI GCANNNNNTGC 1 cut(s) 418
BstAUI TGTACA 2 cut(s) 1831, 2001
BstC8I GCNNGC 4 cut(s) 339, 377, 519, 1608
BstDEI CTNAG 6 cut(s) 213, 632, 899, 1719, 1760, 2110
BstDSI CCRYGG 1 cut(s) 1634
BstEII GGTNACC 1 cut(s) 1025
BstF5I GGATG 5 cut(s) 370, 1155, 1441, 1445, 2218
BstH2I RGCGCY 1 cut(s) 2083
BstHHI GCGC 2 cut(s) 375, 2082
BstKTI GATC 9 cut(s) 581, 688, 898, 938, 1123, 1321, 1630, 2088, 2241
BstMAI GTCTC 6 cut(s) 756, 802, 1362, 1737, 1893, 2113
BstMBI GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
BstMWI GCNNNNNNNGC 5 cut(s) 347, 418, 628, 1724, 1775
BstNI CCWGG 2 cut(s) 114, 266
BstNSI RCATGY 2 cut(s) 521, 2008
BstPI GGTNACC 1 cut(s) 1025
BstSCI CCNGG 4 cut(s) 112, 264, 1612, 1613
BstSFI CTRYAG 3 cut(s) 498, 1040, 1384
BstSLI GKGCMC 2 cut(s) 1441, 2018
BstV1I GCAGC 5 cut(s) 1721, 1741, 2035, 2038, 2107
BstV2I GAAGAC 2 cut(s) 1127, 1899
BstX2I RGATCY 1 cut(s) 935
BstXI CCANNNNNNTGG 1 cut(s) 1872
BstYI RGATCY 1 cut(s) 935
BsuRI GGCC 5 cut(s) 117, 1610, 1707, 1727, 1878
BtgI CCRYGG 1 cut(s) 1634
BtsCI GGATG 5 cut(s) 370, 1155, 1441, 1445, 2218
BtsIMutI CAGTG 4 cut(s) 476, 686, 979, 990
BveI ACCTGC 2 cut(s) 719, 832
Cac8I GCNNGC 4 cut(s) 339, 377, 519, 1608
CaiI CAGNNNCTG 1 cut(s) 1976
CfoI GCGC 2 cut(s) 375, 2082
Cfr13I GGNCC 7 cut(s) 262, 988, 1085, 1592, 1609, 1706, 1876
Cfr9I CCCGGG 1 cut(s) 1613
Csp6I GTAC 7 cut(s) 677, 1349, 1486, 1493, 1511, 1832, 2002
CspCI CAANNNNNGTGG 2 cut(s) 662, 697
CviQI GTAC 7 cut(s) 677, 1349, 1486, 1493, 1511, 1832, 2002
DdeI CTNAG 6 cut(s) 213, 632, 899, 1719, 1760, 2110
DpnI GATC 9 cut(s) 580, 687, 897, 937, 1122, 1320, 1629, 2087, 2240
DpnII GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
DraI TTTAAA 2 cut(s) 237, 1284
DraIII CACNNNGTG 1 cut(s) 173
Eam1104I CTCTTC 1 cut(s) 2121
EarI CTCTTC 1 cut(s) 2121
Eco130I CCWWGG 2 cut(s) 1030, 1091
Eco31I GGTCTC 1 cut(s) 2113
Eco47I GGWCC 4 cut(s) 262, 988, 1085, 1592
Eco47III AGCGCT 1 cut(s) 2081
Eco57I CTGAAG 3 cut(s) 987, 1121, 1928
Eco88I CYCGRG 1 cut(s) 1613
Eco91I GGTNACC 1 cut(s) 1025
EcoO109I RGGNCCY 2 cut(s) 1609, 1706
EcoO65I GGTNACC 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 112, 264
EcoT14I CCWWGG 2 cut(s) 1030, 1091
EcoT22I ATGCAT 2 cut(s) 37, 523
ErhI CCWWGG 2 cut(s) 1030, 1091
Esp3I CGTCTC 1 cut(s) 756
FalI AAGNNNNNCTT 6 cut(s) 913, 945, 1258, 1290, 1695, 1727
FaqI GGGAC 1 cut(s) 1657
FauNDI CATATG 3 cut(s) 995, 1687, 2183
FbaI TGATCA 1 cut(s) 1627
FblI GTMKAC 1 cut(s) 820
Fnu4HI GCNGC 7 cut(s) 545, 1735, 1755, 1770, 2024, 2027, 2096
FokI GGATG 5 cut(s) 377, 1162, 1428, 1432, 2225
Fsp4HI GCNGC 7 cut(s) 545, 1735, 1755, 1770, 2024, 2027, 2096
FspBI CTAG 7 cut(s) 249, 801, 1031, 1203, 1248, 1400, 1751
FspI TGCGCA 1 cut(s) 374
GlaI GCGC 2 cut(s) 374, 2081
GluI GCNGC 7 cut(s) 545, 1735, 1755, 1770, 2024, 2027, 2096
GsaI CCCAGC 2 cut(s) 1910, 2074
GsuI CTGGAG 3 cut(s) 96, 500, 1650
HaeII RGCGCY 1 cut(s) 2083
HaeIII GGCC 5 cut(s) 117, 1610, 1707, 1727, 1878
HapII CCGG 2 cut(s) 1556, 1614
HhaI GCGC 2 cut(s) 375, 2082
Hin6I GCGC 2 cut(s) 373, 2080
HinP1I GCGC 2 cut(s) 373, 2080
HincII GTYRAC 2 cut(s) 1422, 2173
HindII GTYRAC 2 cut(s) 1422, 2173
HindIII AAGCTT 2 cut(s) 1257, 1272
HinfI GANTC 9 cut(s) 320, 860, 1355, 1477, 1536, 1645, 2033, 2042, 2282
HpaII CCGG 2 cut(s) 1556, 1614
Hpy188I TCNGA 7 cut(s) 144, 690, 1010, 1120, 1140, 1335, 1972
Hpy188III TCNNGA 9 cut(s) 41, 67, 287, 1400, 1449, 1742, 1805, 2289, 2298
HpyAV CCTTC 5 cut(s) 219, 500, 612, 1139, 1697
HpyCH4III ACNGT 3 cut(s) 273, 595, 681
HpyCH4IV ACGT 1 cut(s) 1279
HpyF10VI GCNNNNNNNGC 5 cut(s) 347, 418, 628, 1724, 1775
HpyF3I CTNAG 6 cut(s) 213, 632, 899, 1719, 1760, 2110
HpySE526I ACGT 1 cut(s) 1279
HspAI GCGC 2 cut(s) 373, 2080
KpnI GGTACC 1 cut(s) 1489
Ksp22I TGATCA 1 cut(s) 1627
Kzo9I GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
LguI GCTCTTC 1 cut(s) 2121
LmnI GCTCC 4 cut(s) 211, 334, 355, 1371
Lsp1109I GCAGC 5 cut(s) 1721, 1741, 2035, 2038, 2107
LweI GCATC 5 cut(s) 22, 44, 442, 1537, 1963
MaeI CTAG 7 cut(s) 249, 801, 1031, 1203, 1248, 1400, 1751
MaeII ACGT 1 cut(s) 1279
MaeIII GTNAC 5 cut(s) 556, 923, 1025, 1544, 1657
MalI GATC 9 cut(s) 580, 687, 897, 937, 1122, 1320, 1629, 2087, 2240
MboI GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
MboII GAAGA 9 cut(s) 302, 329, 473, 1127, 1328, 1904, 1920, 2108, 2255
MflI RGATCY 1 cut(s) 935
MhlI GDGCHC 3 cut(s) 352, 1441, 2018
MluCI AATT 9 cut(s) 48, 184, 307, 368, 743, 911, 1018, 1560, 1578
MlyI GAGTC 4 cut(s) 1364, 1486, 1639, 2291
MmeI TCCRAC 3 cut(s) 372, 1433, 2113
Mph1103I ATGCAT 2 cut(s) 37, 523
MroXI GAANNNNTTC 2 cut(s) 1004, 1340
MslI CAYNNNNRTG 1 cut(s) 2053
MspA1I CMGCKG 1 cut(s) 1718
MspI CCGG 2 cut(s) 1556, 1614
MspR9I CCNGG 4 cut(s) 114, 266, 1614, 1615
Mva1269I GAATGC 2 cut(s) 429, 1585
MvaI CCWGG 2 cut(s) 114, 266
MwoI GCNNNNNNNGC 5 cut(s) 347, 418, 628, 1724, 1775
NciI CCSGG 2 cut(s) 1614, 1615
NdeI CATATG 3 cut(s) 995, 1687, 2183
NdeII GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
NlaIV GGNNCC 8 cut(s) 1036, 1188, 1373, 1438, 1487, 1611, 1877, 2221
NmeAIII GCCGAG 1 cut(s) 2305
NmuCI GTSAC 2 cut(s) 1025, 1657
NsbI TGCGCA 1 cut(s) 374
NsiI ATGCAT 2 cut(s) 37, 523
NspI RCATGY 2 cut(s) 521, 2008
PaeI GCATGC 1 cut(s) 521
PciI ACATGT 1 cut(s) 2004
PciSI GCTCTTC 1 cut(s) 2121
PcsI WCGNNNNNNNCGW 1 cut(s) 1738
PctI GAATGC 2 cut(s) 429, 1585
PdmI GAANNNNTTC 2 cut(s) 1004, 1340
PfeI GAWTC 5 cut(s) 320, 860, 1536, 2033, 2042
PkrI GCNGC 7 cut(s) 546, 1736, 1756, 1771, 2025, 2028, 2097
PleI GAGTC 4 cut(s) 1363, 1485, 1639, 2290
PpsI GAGTC 4 cut(s) 1363, 1485, 1639, 2290
PscI ACATGT 1 cut(s) 2004
Psp6I CCWGG 2 cut(s) 112, 264
PspEI GGTNACC 1 cut(s) 1025
PspFI CCCAGC 2 cut(s) 1906, 2070
PspGI CCWGG 2 cut(s) 112, 264
PspN4I GGNNCC 8 cut(s) 1036, 1188, 1373, 1438, 1487, 1611, 1877, 2221
PspPI GGNCC 7 cut(s) 262, 988, 1085, 1592, 1609, 1706, 1876
PstNI CAGNNNCTG 1 cut(s) 1976
PsuI RGATCY 1 cut(s) 935
PvuII CAGCTG 1 cut(s) 1718
RsaI GTAC 7 cut(s) 678, 1350, 1487, 1494, 1512, 1833, 2003
RsaNI GTAC 7 cut(s) 677, 1349, 1486, 1493, 1511, 1832, 2002
RseI CAYNNNNRTG 1 cut(s) 2053
SapI GCTCTTC 1 cut(s) 2121
SatI GCNGC 7 cut(s) 545, 1735, 1755, 1770, 2024, 2027, 2096
Sau3AI GATC 9 cut(s) 578, 685, 895, 935, 1120, 1318, 1627, 2085, 2238
Sau96I GGNCC 7 cut(s) 262, 988, 1085, 1592, 1609, 1706, 1876
ScaI AGTACT 1 cut(s) 1512
SchI GAGTC 4 cut(s) 1364, 1486, 1639, 2291
ScrFI CCNGG 4 cut(s) 114, 266, 1614, 1615
SduI GDGCHC 3 cut(s) 352, 1441, 2018
SfaNI GCATC 5 cut(s) 22, 44, 442, 1537, 1963
SfcI CTRYAG 3 cut(s) 498, 1040, 1384
SinI GGWCC 4 cut(s) 262, 988, 1085, 1592
SmaI CCCGGG 1 cut(s) 1615
SmiMI CAYNNNNRTG 1 cut(s) 2053
SmlI CTYRAG 4 cut(s) 41, 919, 1238, 1289
SmoI CTYRAG 4 cut(s) 41, 919, 1238, 1289
SpeI ACTAGT 1 cut(s) 1247
SphI GCATGC 1 cut(s) 521
Sse9I AATT 9 cut(s) 48, 184, 307, 368, 743, 911, 1018, 1560, 1578
SsiI CCGC 3 cut(s) 545, 991, 1770
SspMI CTAG 7 cut(s) 249, 801, 1031, 1203, 1248, 1400, 1751
StyD4I CCNGG 4 cut(s) 112, 264, 1612, 1613
StyI CCWWGG 2 cut(s) 1030, 1091
TaaI ACNGT 3 cut(s) 273, 595, 681
TaiI ACGT 1 cut(s) 1282
TaqI TCGA 7 cut(s) 434, 653, 909, 1621, 1741, 2040, 2241
TaqII GACCGA 1 cut(s) 1911
TasI AATT 9 cut(s) 48, 184, 307, 368, 743, 911, 1018, 1560, 1578
TatI WGTACW 6 cut(s) 676, 1348, 1492, 1510, 1831, 2001
TauI GCSGC 2 cut(s) 547, 1772
TfiI GAWTC 5 cut(s) 320, 860, 1536, 2033, 2042
TscAI CASTG 4 cut(s) 483, 686, 979, 990
TseFI GTSAC 2 cut(s) 1025, 1657
TseI GCWGC 5 cut(s) 1734, 1754, 2023, 2026, 2095
Tsp45I GTSAC 2 cut(s) 1025, 1657
TspDTI ATGAA 7 cut(s) 17, 381, 474, 482, 776, 1674, 1920
TspGWI ACGGA 1 cut(s) 1584
TspMI CCCGGG 1 cut(s) 1613
TspRI CASTG 4 cut(s) 483, 686, 979, 990
VpaK11BI GGWCC 4 cut(s) 262, 988, 1085, 1592
XapI RAATTY 4 cut(s) 48, 307, 1560, 1578
XbaI TCTAGA 1 cut(s) 1399
XceI RCATGY 2 cut(s) 521, 2008
XcmI CCANNNNNNNNNTGG 1 cut(s) 125
XmaI CCCGGG 1 cut(s) 1613
XmaJI CCTAGG 1 cut(s) 1030
XmiI GTMKAC 1 cut(s) 820
XmnI GAANNNNTTC 2 cut(s) 1004, 1340
XspI CTAG 7 cut(s) 249, 801, 1031, 1203, 1248, 1400, 1751
ZrmI AGTACT 1 cut(s) 1512
Zsp2I ATGCAT 2 cut(s) 37, 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.