Protein kinase superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13040 |
| malus_domestica | MD05G1245500.v1.1 MD10G1226800.v1.1 |
| prunus_persica | Prupe.4G118400_v2.0.a1 |
| pyrus_communis | pycom05g22160 pycom10g19070 |
| rosa_chinensis | RchiOBHm_Chr5g0021231 |
| rosa_laevigata | RLG00000032597 |
| rosa_multiflora | Rmu_sc0003392.1_g000017 Rmu_sc0004847.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057270 |
| rosa_rugosa | Rorug05G0065300 |
| rosa_samantha | Rh5AG154400 Rh5BG154000 Rh5CG167600 Rh5DG154500 |
| rosa_wichuraiana | Rw5G013760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 260, 1320 |
| Acc36I | ACCTGC | 2 cut(s) | 84, 919 |
| Acc65I | GGTACC | 1 cut(s) | 1365 |
| AccB1I | GGYRCC | 1 cut(s) | 1365 |
| AccII | CGCG | 3 cut(s) | 454, 1159, 1761 |
| AccIII | TCCGGA | 2 cut(s) | 306, 1684 |
| AclWI | GGATC | 4 cut(s) | 459, 472, 579, 845 |
| AcsI | RAATTY | 2 cut(s) | 202, 890 |
| AcuI | CTGAAG | 4 cut(s) | 66, 873, 1007, 1808 |
| AfaI | GTAC | 5 cut(s) | 818, 933, 960, 1230, 1367 |
| AfeI | AGCGCT | 2 cut(s) | 507, 1961 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1455, 1520, 1603 |
| AflII | CTTAAG | 1 cut(s) | 1162 |
| AgsI | TTSAA | 6 cut(s) | 90, 833, 1115, 1337, 1405, 2149 |
| AhlI | ACTAGT | 1 cut(s) | 1534 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2029, 2061 |
| Alw26I | GTCTC | 6 cut(s) | 18, 1006, 1242, 1617, 1773, 1937 |
| AlwI | GGATC | 4 cut(s) | 459, 472, 579, 845 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1626 |
| Ama87I | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| Aor13HI | TCCGGA | 2 cut(s) | 306, 1684 |
| Aor51HI | AGCGCT | 2 cut(s) | 507, 1961 |
| AoxI | GGCC | 4 cut(s) | 19, 1585, 1756, 2085 |
| ApoI | RAATTY | 2 cut(s) | 202, 890 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1117, 1149 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 890, 1220 |
| Asp718I | GGTACC | 1 cut(s) | 1365 |
| AspA2I | CCTAGG | 1 cut(s) | 916 |
| AspLEI | GCGC | 7 cut(s) | 261, 508, 1161, 1294, 1321, 1763, 1962 |
| AspS9I | GGNCC | 8 cut(s) | 19, 874, 913, 1472, 1586, 1756, 2085, 2184 |
| AsuC2I | CCSGG | 3 cut(s) | 18, 1494, 1495 |
| AvaI | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| AvaII | GGWCC | 4 cut(s) | 874, 913, 1472, 2184 |
| AvrII | CCTAGG | 1 cut(s) | 916 |
| AxyI | CCTNAGG | 2 cut(s) | 1450, 2167 |
| BamHI | GGATCC | 1 cut(s) | 464 |
| BanI | GGYRCC | 1 cut(s) | 1365 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1173, 1205 |
| BbsI | GAAGAC | 2 cut(s) | 375, 1779 |
| BccI | CCATC | 3 cut(s) | 1577, 1852, 2087 |
| BceAI | ACGGC | 1 cut(s) | 2072 |
| BclI | TGATCA | 2 cut(s) | 553, 1507 |
| BcnI | CCSGG | 3 cut(s) | 18, 1494, 1495 |
| BcoDI | GTCTC | 6 cut(s) | 18, 1006, 1242, 1617, 1773, 1937 |
| BcuI | ACTAGT | 1 cut(s) | 1534 |
| BfaI | CTAG | 7 cut(s) | 687, 917, 1089, 1535, 1631, 1979, 2188 |
| BfmI | CTRYAG | 4 cut(s) | 825, 926, 1264, 1618 |
| BfoI | RGCGCY | 2 cut(s) | 509, 1963 |
| BfrI | CTTAAG | 1 cut(s) | 1162 |
| BfuAI | ACCTGC | 2 cut(s) | 84, 919 |
| BlnI | CCTAGG | 1 cut(s) | 916 |
| Bme1390I | CCNGG | 3 cut(s) | 18, 1494, 1495 |
| Bme18I | GGWCC | 4 cut(s) | 874, 913, 1472, 2184 |
| BmeT110I | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| BmgT120I | GGNCC | 8 cut(s) | 19, 874, 913, 1472, 1586, 1756, 2085, 2184 |
| BmiI | GGNNCC | 9 cut(s) | 466, 914, 1074, 1253, 1367, 1474, 1588, 1757, 2185 |
| BmrFI | CCNGG | 3 cut(s) | 18, 1494, 1495 |
| BmsI | GCATC | 3 cut(s) | 300, 1330, 1417 |
| BoxI | GACNNNNGTC | 2 cut(s) | 10, 1356 |
| BpiI | GAAGAC | 2 cut(s) | 375, 1779 |
| BpmI | CTGGAG | 2 cut(s) | 852, 1530 |
| BpuEI | CTTGAG | 4 cut(s) | 790, 1563, 1705, 1985 |
| BpuMI | CCSGG | 3 cut(s) | 18, 1494, 1495 |
| BsaBI | GATNNNNATC | 1 cut(s) | 354 |
| BsaJI | CCNNGG | 6 cut(s) | 916, 977, 1492, 1493, 1494, 1599 |
| BsaWI | WCCGGW | 4 cut(s) | 306, 332, 876, 1684 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 191, 221, 750, 780 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1455, 1520, 1603 |
| Bse1I | ACTGG | 3 cut(s) | 869, 1197, 1547 |
| Bse21I | CCTNAGG | 2 cut(s) | 1450, 2167 |
| Bse3DI | GCAATG | 4 cut(s) | 1659, 1905, 1928, 1940 |
| Bse8I | GATNNNNATC | 1 cut(s) | 354 |
| BseAI | TCCGGA | 2 cut(s) | 306, 1684 |
| BseDI | CCNNGG | 6 cut(s) | 916, 977, 1492, 1493, 1494, 1599 |
| BseGI | GGATG | 4 cut(s) | 315, 1321, 1510, 2158 |
| BseJI | GATNNNNATC | 1 cut(s) | 354 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1455, 1520, 1603 |
| BseMI | GCAATG | 4 cut(s) | 1659, 1905, 1928, 1940 |
| BseMII | CTCAG | 5 cut(s) | 1017, 1063, 1464, 2151, 2181 |
| BseNI | ACTGG | 3 cut(s) | 869, 1197, 1547 |
| BseRI | GAGGAG | 2 cut(s) | 1616, 1988 |
| BseYI | CCCAGC | 1 cut(s) | 1950 |
| BsgI | GTGCAG | 1 cut(s) | 1668 |
| Bsh1236I | CGCG | 3 cut(s) | 454, 1159, 1761 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1920 |
| BshFI | GGCC | 4 cut(s) | 21, 1587, 1758, 2087 |
| BshNI | GGYRCC | 1 cut(s) | 1365 |
| BsiEI | CGRYCG | 1 cut(s) | 1920 |
| BsiHKCI | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| BsiSI | CCGG | 8 cut(s) | 17, 307, 333, 877, 1289, 1436, 1494, 1685 |
| BslFI | GGGAC | 5 cut(s) | 18, 219, 926, 1458, 1537 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1455, 1520, 1603 |
| BsmAI | GTCTC | 6 cut(s) | 18, 1006, 1242, 1617, 1773, 1937 |
| BsmBI | CGTCTC | 1 cut(s) | 1937 |
| BsmFI | GGGAC | 5 cut(s) | 18, 219, 926, 1458, 1537 |
| BsmI | GAATGC | 2 cut(s) | 904, 1465 |
| BsnI | GGCC | 4 cut(s) | 21, 1587, 1758, 2087 |
| BsoBI | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| Bsp13I | TCCGGA | 2 cut(s) | 306, 1684 |
| Bsp1407I | TGTACA | 1 cut(s) | 958 |
| BspANI | GGCC | 4 cut(s) | 21, 1587, 1758, 2087 |
| BspCNI | CTCAG | 5 cut(s) | 1016, 1062, 1463, 2152, 2180 |
| BspEI | TCCGGA | 2 cut(s) | 306, 1684 |
| BspFNI | CGCG | 3 cut(s) | 454, 1159, 1761 |
| BspHI | TCATGA | 1 cut(s) | 243 |
| BspLI | GGNNCC | 9 cut(s) | 466, 914, 1074, 1253, 1367, 1474, 1588, 1757, 2185 |
| BspMAI | CTGCAG | 3 cut(s) | 829, 930, 1622 |
| BspMI | ACCTGC | 2 cut(s) | 84, 919 |
| BspPI | GGATC | 4 cut(s) | 459, 472, 579, 845 |
| BspT107I | GGYRCC | 1 cut(s) | 1365 |
| BspTI | CTTAAG | 1 cut(s) | 1162 |
| BsrDI | GCAATG | 4 cut(s) | 1659, 1905, 1928, 1940 |
| BsrGI | TGTACA | 1 cut(s) | 958 |
| BsrI | ACTGG | 3 cut(s) | 869, 1197, 1547 |
| BssECI | CCNNGG | 6 cut(s) | 916, 977, 1492, 1493, 1494, 1599 |
| BssT1I | CCWWGG | 2 cut(s) | 916, 977 |
| Bst4CI | ACNGT | 2 cut(s) | 72, 1784 |
| Bst6I | CTCTTC | 4 cut(s) | 109, 109, 1098, 1813 |
| BstAFI | CTTAAG | 1 cut(s) | 1162 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1626 |
| BstAUI | TGTACA | 1 cut(s) | 958 |
| BstC8I | GCNNGC | 2 cut(s) | 263, 405 |
| BstDEI | CTNAG | 8 cut(s) | 509, 785, 1003, 1049, 1450, 1640, 2160, 2167 |
| BstF5I | GGATG | 4 cut(s) | 315, 1321, 1510, 2158 |
| BstFNI | CGCG | 3 cut(s) | 454, 1159, 1761 |
| BstH2I | RGCGCY | 2 cut(s) | 509, 1963 |
| BstHHI | GCGC | 7 cut(s) | 261, 508, 1161, 1294, 1321, 1763, 1962 |
| BstMAI | GTCTC | 6 cut(s) | 18, 1006, 1242, 1617, 1773, 1937 |
| BstMCI | CGRYCG | 1 cut(s) | 1920 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 514, 1165, 1462, 1626, 1663 |
| BstNSI | RCATGY | 2 cut(s) | 407, 1820 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 10, 1356 |
| BstSCI | CCNGG | 3 cut(s) | 16, 1492, 1493 |
| BstSFI | CTRYAG | 4 cut(s) | 825, 926, 1264, 1618 |
| BstUI | CGCG | 3 cut(s) | 454, 1159, 1761 |
| BstV2I | GAAGAC | 2 cut(s) | 375, 1779 |
| BstX2I | RGATCY | 1 cut(s) | 464 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1130, 1752 |
| BstYI | RGATCY | 1 cut(s) | 464 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1450, 2167 |
| BsuRI | GGCC | 4 cut(s) | 21, 1587, 1758, 2087 |
| BtsCI | GGATG | 4 cut(s) | 315, 1321, 1510, 2158 |
| BtsIMutI | CAGTG | 2 cut(s) | 876, 1057 |
| BveI | ACCTGC | 2 cut(s) | 84, 919 |
| Cac8I | GCNNGC | 2 cut(s) | 263, 405 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1626 |
| CciI | TCATGA | 1 cut(s) | 243 |
| CfoI | GCGC | 7 cut(s) | 261, 508, 1161, 1294, 1321, 1763, 1962 |
| Cfr13I | GGNCC | 8 cut(s) | 19, 874, 913, 1472, 1586, 1756, 2085, 2184 |
| Cfr9I | CCCGGG | 1 cut(s) | 1493 |
| CseI | GACGC | 2 cut(s) | 230, 1862 |
| Csp6I | GTAC | 5 cut(s) | 817, 932, 959, 1229, 1366 |
| CviQI | GTAC | 5 cut(s) | 817, 932, 959, 1229, 1366 |
| DdeI | CTNAG | 8 cut(s) | 509, 785, 1003, 1049, 1450, 1640, 2160, 2167 |
| DraI | TTTAAA | 1 cut(s) | 598 |
| Eam1104I | CTCTTC | 4 cut(s) | 109, 109, 1098, 1813 |
| EarI | CTCTTC | 4 cut(s) | 109, 109, 1098, 1813 |
| EciI | GGCGGA | 1 cut(s) | 1471 |
| Eco130I | CCWWGG | 2 cut(s) | 916, 977 |
| Eco32I | GATATC | 1 cut(s) | 537 |
| Eco47I | GGWCC | 4 cut(s) | 874, 913, 1472, 2184 |
| Eco47III | AGCGCT | 2 cut(s) | 507, 1961 |
| Eco57I | CTGAAG | 4 cut(s) | 66, 873, 1007, 1808 |
| Eco81I | CCTNAGG | 2 cut(s) | 1450, 2167 |
| Eco88I | CYCGRG | 3 cut(s) | 161, 1493, 1598 |
| EcoO109I | RGGNCCY | 2 cut(s) | 913, 2184 |
| EcoRI | GAATTC | 1 cut(s) | 202 |
| EcoRV | GATATC | 1 cut(s) | 537 |
| EcoT14I | CCWWGG | 2 cut(s) | 916, 977 |
| EcoT22I | ATGCAT | 1 cut(s) | 409 |
| ErhI | CCWWGG | 2 cut(s) | 916, 977 |
| Esp3I | CGTCTC | 1 cut(s) | 1937 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 360, 392 |
| FaqI | GGGAC | 5 cut(s) | 18, 219, 926, 1458, 1537 |
| FauNDI | CATATG | 1 cut(s) | 2063 |
| FbaI | TGATCA | 2 cut(s) | 553, 1507 |
| FokI | GGATG | 4 cut(s) | 322, 1308, 1497, 2165 |
| FspAI | RTGCGCAY | 1 cut(s) | 1320 |
| FspBI | CTAG | 7 cut(s) | 687, 917, 1089, 1535, 1631, 1979, 2188 |
| FspI | TGCGCA | 2 cut(s) | 260, 1320 |
| GlaI | GCGC | 7 cut(s) | 260, 507, 1160, 1293, 1320, 1762, 1961 |
| GsaI | CCCAGC | 1 cut(s) | 1954 |
| GsuI | CTGGAG | 2 cut(s) | 852, 1530 |
| HaeII | RGCGCY | 2 cut(s) | 509, 1963 |
| HaeIII | GGCC | 4 cut(s) | 21, 1587, 1758, 2087 |
| HapII | CCGG | 8 cut(s) | 17, 307, 333, 877, 1289, 1436, 1494, 1685 |
| HgaI | GACGC | 2 cut(s) | 230, 1862 |
| HhaI | GCGC | 7 cut(s) | 261, 508, 1161, 1294, 1321, 1763, 1962 |
| Hin6I | GCGC | 7 cut(s) | 259, 506, 1159, 1292, 1319, 1761, 1960 |
| HinP1I | GCGC | 7 cut(s) | 259, 506, 1159, 1292, 1319, 1761, 1960 |
| HincII | GTYRAC | 3 cut(s) | 1120, 1302, 1708 |
| HindII | GTYRAC | 3 cut(s) | 1120, 1302, 1708 |
| HindIII | AAGCTT | 2 cut(s) | 263, 1218 |
| HinfI | GANTC | 8 cut(s) | 215, 746, 1235, 1357, 1525, 1913, 1922, 2162 |
| HpaII | CCGG | 8 cut(s) | 17, 307, 333, 877, 1289, 1436, 1494, 1685 |
| Hpy188I | TCNGA | 8 cut(s) | 45, 199, 220, 576, 1006, 1026, 1326, 1852 |
| HpyAV | CCTTC | 6 cut(s) | 386, 481, 1025, 1031, 1087, 2143 |
| HpyCH4III | ACNGT | 2 cut(s) | 72, 1784 |
| HpyCH4IV | ACGT | 2 cut(s) | 1569, 2138 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 514, 1165, 1462, 1626, 1663 |
| HpyF3I | CTNAG | 8 cut(s) | 509, 785, 1003, 1049, 1450, 1640, 2160, 2167 |
| HpySE526I | ACGT | 2 cut(s) | 1569, 2138 |
| HspAI | GCGC | 7 cut(s) | 259, 506, 1159, 1292, 1319, 1761, 1960 |
| Kpn2I | TCCGGA | 2 cut(s) | 306, 1684 |
| KpnI | GGTACC | 1 cut(s) | 1369 |
| Ksp22I | TGATCA | 2 cut(s) | 553, 1507 |
| LmnI | GCTCC | 3 cut(s) | 503, 643, 1895 |
| LweI | GCATC | 3 cut(s) | 300, 1330, 1417 |
| MaeI | CTAG | 7 cut(s) | 687, 917, 1089, 1535, 1631, 1979, 2188 |
| MaeII | ACGT | 2 cut(s) | 1569, 2138 |
| MaeIII | GTNAC | 2 cut(s) | 1537, 2134 |
| MflI | RGATCY | 1 cut(s) | 464 |
| MlyI | GAGTC | 5 cut(s) | 1244, 1366, 1519, 1907, 2171 |
| MmeI | TCCRAC | 3 cut(s) | 345, 1105, 1349 |
| Mph1103I | ATGCAT | 1 cut(s) | 409 |
| MroI | TCCGGA | 2 cut(s) | 306, 1684 |
| MroXI | GAANNNNTTC | 2 cut(s) | 890, 1220 |
| MseI | TTAA | 6 cut(s) | 597, 768, 800, 1163, 1170, 2069 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1933 |
| MspA1I | CMGCKG | 2 cut(s) | 1297, 1731 |
| MspCI | CTTAAG | 1 cut(s) | 1162 |
| MspI | CCGG | 8 cut(s) | 17, 307, 333, 877, 1289, 1436, 1494, 1685 |
| MspR9I | CCNGG | 3 cut(s) | 18, 1494, 1495 |
| MssI | GTTTAAAC | 1 cut(s) | 598 |
| Mva1269I | GAATGC | 2 cut(s) | 904, 1465 |
| MvnI | CGCG | 3 cut(s) | 454, 1159, 1761 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 514, 1165, 1462, 1626, 1663 |
| NciI | CCSGG | 3 cut(s) | 18, 1494, 1495 |
| NdeI | CATATG | 1 cut(s) | 2063 |
| NlaIV | GGNNCC | 9 cut(s) | 466, 914, 1074, 1253, 1367, 1474, 1588, 1757, 2185 |
| NmuCI | GTSAC | 1 cut(s) | 1537 |
| NsbI | TGCGCA | 2 cut(s) | 260, 1320 |
| NsiI | ATGCAT | 1 cut(s) | 409 |
| NspI | RCATGY | 2 cut(s) | 407, 1820 |
| PaeI | GCATGC | 1 cut(s) | 407 |
| PaeR7I | CTCGAG | 1 cut(s) | 161 |
| PagI | TCATGA | 1 cut(s) | 243 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 203 |
| PctI | GAATGC | 2 cut(s) | 904, 1465 |
| PdmI | GAANNNNTTC | 2 cut(s) | 890, 1220 |
| PfeI | GAWTC | 3 cut(s) | 215, 746, 1922 |
| Ple19I | CGATCG | 1 cut(s) | 1920 |
| PleI | GAGTC | 5 cut(s) | 1243, 1365, 1519, 1907, 2170 |
| PmeI | GTTTAAAC | 1 cut(s) | 598 |
| PpsI | GAGTC | 5 cut(s) | 1243, 1365, 1519, 1907, 2170 |
| PpuMI | RGGWCCY | 2 cut(s) | 913, 2184 |
| PshAI | GACNNNNGTC | 2 cut(s) | 10, 1356 |
| Psp5II | RGGWCCY | 2 cut(s) | 913, 2184 |
| PspFI | CCCAGC | 1 cut(s) | 1950 |
| PspN4I | GGNNCC | 9 cut(s) | 466, 914, 1074, 1253, 1367, 1474, 1588, 1757, 2185 |
| PspPI | GGNCC | 8 cut(s) | 19, 874, 913, 1472, 1586, 1756, 2085, 2184 |
| PspPPI | RGGWCCY | 2 cut(s) | 913, 2184 |
| PspXI | VCTCGAGB | 1 cut(s) | 161 |
| PstI | CTGCAG | 3 cut(s) | 829, 930, 1622 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1626 |
| PsuI | RGATCY | 1 cut(s) | 464 |
| PvuI | CGATCG | 1 cut(s) | 1920 |
| PvuII | CAGCTG | 2 cut(s) | 1297, 1731 |
| RsaI | GTAC | 5 cut(s) | 818, 933, 960, 1230, 1367 |
| RsaNI | GTAC | 5 cut(s) | 817, 932, 959, 1229, 1366 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1933 |
| SaqAI | TTAA | 6 cut(s) | 597, 768, 800, 1163, 1170, 2069 |
| Sau96I | GGNCC | 8 cut(s) | 19, 874, 913, 1472, 1586, 1756, 2085, 2184 |
| SchI | GAGTC | 5 cut(s) | 1244, 1366, 1519, 1907, 2171 |
| ScrFI | CCNGG | 3 cut(s) | 18, 1494, 1495 |
| SfaNI | GCATC | 3 cut(s) | 300, 1330, 1417 |
| SfcI | CTRYAG | 4 cut(s) | 825, 926, 1264, 1618 |
| Sfr274I | CTCGAG | 1 cut(s) | 161 |
| SinI | GGWCC | 4 cut(s) | 874, 913, 1472, 2184 |
| SlaI | CTCGAG | 1 cut(s) | 161 |
| SmaI | CCCGGG | 1 cut(s) | 1495 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1933 |
| SmlI | CTYRAG | 6 cut(s) | 161, 805, 1162, 1578, 1720, 2000 |
| SmoI | CTYRAG | 6 cut(s) | 161, 805, 1162, 1578, 1720, 2000 |
| SpeI | ACTAGT | 1 cut(s) | 1534 |
| SphI | GCATGC | 1 cut(s) | 407 |
| SspMI | CTAG | 7 cut(s) | 687, 917, 1089, 1535, 1631, 1979, 2188 |
| StyD4I | CCNGG | 3 cut(s) | 16, 1492, 1493 |
| StyI | CCWWGG | 2 cut(s) | 916, 977 |
| TaaI | ACNGT | 2 cut(s) | 72, 1784 |
| TaiI | ACGT | 2 cut(s) | 1572, 2141 |
| TaqII | GACCGA | 1 cut(s) | 1791 |
| TatI | WGTACW | 2 cut(s) | 958, 1228 |
| TauI | GCSGC | 2 cut(s) | 436, 1761 |
| TfiI | GAWTC | 3 cut(s) | 215, 746, 1922 |
| Tru1I | TTAA | 6 cut(s) | 597, 768, 800, 1163, 1170, 2069 |
| Tru9I | TTAA | 6 cut(s) | 597, 768, 800, 1163, 1170, 2069 |
| TscAI | CASTG | 2 cut(s) | 876, 1057 |
| TseFI | GTSAC | 1 cut(s) | 1537 |
| Tsp45I | GTSAC | 1 cut(s) | 1537 |
| TspDTI | ATGAA | 9 cut(s) | 232, 267, 360, 368, 641, 662, 984, 1554, 1800 |
| TspGWI | ACGGA | 3 cut(s) | 46, 804, 1503 |
| TspMI | CCCGGG | 1 cut(s) | 1493 |
| TspRI | CASTG | 2 cut(s) | 876, 1057 |
| Vha464I | CTTAAG | 1 cut(s) | 1162 |
| VpaK11BI | GGWCC | 4 cut(s) | 874, 913, 1472, 2184 |
| XapI | RAATTY | 2 cut(s) | 202, 890 |
| XceI | RCATGY | 2 cut(s) | 407, 1820 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 29 |
| XhoI | CTCGAG | 1 cut(s) | 161 |
| XmaI | CCCGGG | 1 cut(s) | 1493 |
| XmaJI | CCTAGG | 1 cut(s) | 916 |
| XmnI | GAANNNNTTC | 2 cut(s) | 890, 1220 |
| XspI | CTAG | 7 cut(s) | 687, 917, 1089, 1535, 1631, 1979, 2188 |
| Zsp2I | ATGCAT | 1 cut(s) | 409 |