MD10G1226800.v1.1
ERF Family

Protein kinase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0014690
Physical Location & Seq
Reverse (-)
32374710 .. 32377010
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1226800.v1.1.491

Sequence Viewer

Length: 2301 bp
ATGTTAGCAATGAAATTAGGTAATCAACAAAACGATTTCGATTCGTCTTTTGAGCAAAGTTTGAGTGGAAGTTTTAGAAAGTTCACATCTGGTTTGCTACAAAATGATATGGGATTGCTGTCTCCGGGCCATAGCTCGAATGGTAGTTTTCGGAGGTCTAACTCCGTTATGTCCACACATTCCGGCGCTTCAGCTTCAAGCAAGTTTGCCTCTTCTTCCAGAAGAGTGTCCAAGGGGCTAAAGGACTATTCAAGGAAACTTGTTGACCTCGAATTGTTCACAGATTGTATTCGGGATTGGGTTTCGGAGAATTCGTGCGAAGATTCAGCAACTGGTTTTGGTCCTCCCTTTATAATCGATGAATTGCGCAAGCTTGATGTGGCATTGGAGGGTGTTTTGTTTCAGCAACTTGTCCGGATGCCATGCTCACCTTATGTTTCCGGTGATCCAAATGAAGACGAATATCTTGCGTTGGAAGACTTCCTTCATGCTGTAGTGAGTGGTTTGTGGCATGCATTTTGGCATAAAAGAGGTGAGCTTCCGCTATTTGTATCTTGTCCGCGTTCTCTTGGATCCAAGTTTTATAGTGTAGAGAAGGCGATTTCAAGGGGAGGGCTTAGAAAGCTCTGTGGTTTAGCATTGATATCGAAAATTGGGAGTGATCAGCAAGTCCAATGGGATCAAATCATGGAGTTTGCCCTGTTTAAACCTGATATATTGTCCGGAAATGAGTTGAAATTATCAGCTTCCGTTGTCTGTGAAGCCCTCTTTTATGGTTTTCATATACTTGTTTCTAGGTGTTTGAGCAAGGTTAAAGCTACAAAGAGCAGTTTTGTTTTCCTTTTGGTTCTGGATTCTAAATACGGAGGGGTGGTTAAACTTGGAGGTGATCTTAGTAAACTCGAATTAAACTCAACTAACCCGTACAAGTCTGCGGTTGAATGGATAAAGAACCATGCTGAAGTCTCCGTTTCTCCAGTGGATCGGCTATGGAACAAATTCGGGAATGCAAATTGGGGAGACCTAGGAACTCTGCAGGTACTTTTGGCAACTTACAACGCTATTGTACAATGGAATGGGCCGCCAAGGAAGTCAATAGCTTCATTAGTCTCGAATCACAGCCTTCGCCTTCAGAAGCGTAGGATGGAGTTCTGCCTCGGCGGGAATGAGAATGGTCTGGTTCCTTACCTACAACAATCTAGTCATCAACAAGGAGAGATTGTTGAAGTTGACCAAACTAATAGTCAAGTTTTCAAACACAGTGCTTCGCGTTTAAAGCTTAATCAAGGTGAGGTTTTACTGCTGGAAGATCAACAGCAGGGGCAGAAAACTTTCCAAGTACAAGAGTCTCTGGTGGCAGGGATCCATTACCTCTATAGTGCAGTTTGTCTAGATTATCCGACACAGTTGTTGACTTTATACATTGGCGCGCATCCGACCAAACTTGAACCTTGTTGGGAGGACATGAGTCTTTGGTACCAAGTGCAGAGGCAAACAAAAGTGCTAAATATCTTCAAGCATCAGGGAATTACAAGCAAATATTTGCCGGAAATGATTGCCTCTGGGAGGATTTTACATTCTGGCCCCTGCAAGAAGCAGACCCCCGGGGGTCGATGTGATCATCCGTTGTGTGGGACGCCAATACTAGTGACATCTCCAGTTGGTGAACCTGTTTCATATGTTGTTTCTCAAGATGGACCCCTTTCCCCCAAGGAGGCAATTCGCTGCTGCAGAGACTGCCTAGCTGCTCTAAGAAGTGCCACAATGGCAAATGTCCAACATGGTGATATTTGTCCGGAAAACATAATTCGTGTCGTTGACGAACAAGGTTCAAGAAACAGTGGTTTCTACGTTCCAATATCATGGGGCCGCGCAGTTTTGGAAGACCGGGACAGTCCAGCTATAAACCTACACTTCTCCTCATCTCATGCACTTCAGCATGGGAAACTTTGTCCATCATCAGACGCCGAAAGCCTTGTTTACCTTATGTTGTTCGTAAGCGGGGGAACAATGCAGCAGCAGGACTCAATCGAATCTGCCTTGCAATGGAGGGAGACAAGCTGGGCAAAGCGTTCGATCCAACAACAGCTGGGTGAGGTTTCACCACTCCTCAAGGCATTTGCTGACTACGTGGACAGTCTCTCTGGAACACCATATCCTGTGGACTATGGCATATGGTTGAAGAGATTCAGCAGGGCCGTGGACGGCGTGGGAGATAGGGGTAAAATGATCGAAGAAGTGGCGGTAACGTTGAGATTGAAGGACGTTGCTGAGTCCTCAGGAACATCTGGAGGATCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

767

Amino Acids

84.64

Weight (kDa)

7.01

Isoelectric Point (pI)

47.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g13040
malus_domestica MD05G1245500.v1.1 MD10G1226800.v1.1
prunus_persica Prupe.4G118400_v2.0.a1
pyrus_communis pycom05g22160 pycom10g19070
rosa_chinensis RchiOBHm_Chr5g0021231
rosa_laevigata RLG00000032597
rosa_multiflora Rmu_sc0003392.1_g000017 Rmu_sc0004847.1_g000001
rosa_roxburghii Rroxscaffold_1G00057270
rosa_rugosa Rorug05G0065300
rosa_samantha Rh5AG154400 Rh5BG154000 Rh5CG167600 Rh5DG154500
rosa_wichuraiana Rw5G013760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 353
Acc16I TGCGCA 1 cut(s) 368
Acc36I ACCTGC 1 cut(s) 1027
Acc65I GGTACC 1 cut(s) 1476
AccB1I GGYRCC 1 cut(s) 1476
AccII CGCG 4 cut(s) 562, 1270, 1430, 1872
AccIII TCCGGA 3 cut(s) 414, 722, 1795
AciI CCGC 8 cut(s) 542, 560, 935, 1082, 1161, 1870, 2001, 2243
AclI AACGTT 1 cut(s) 2249
AclWI GGATC 9 cut(s) 440, 567, 580, 687, 990, 1357, 1370, 2071, 2289
AcsI RAATTY 2 cut(s) 310, 998
AcuI CTGAAG 4 cut(s) 174, 981, 1115, 1919
AcyI GRCGYC 2 cut(s) 1637, 1965
AfaI GTAC 5 cut(s) 926, 1041, 1068, 1341, 1478
AfiI CCNNNNNNNGG 4 cut(s) 1566, 1631, 1714, 2046
AhlI ACTAGT 1 cut(s) 1645
AloI GAACNNNNNNTCC 2 cut(s) 2140, 2172
Alw26I GTCTC 8 cut(s) 126, 970, 1014, 1114, 1353, 1728, 2048, 2144
AlwI GGATC 9 cut(s) 440, 567, 580, 687, 990, 1357, 1370, 2071, 2289
AlwNI CAGNNNCTG 2 cut(s) 332, 1737
Ama87I CYCGRG 1 cut(s) 1604
Aor13HI TCCGGA 3 cut(s) 414, 722, 1795
AoxI GGCC 5 cut(s) 127, 1079, 1582, 1867, 2196
ApeKI GCWGC 5 cut(s) 1725, 1728, 1745, 2014, 2017
ApoI RAATTY 2 cut(s) 310, 998
ArsI GACNNNNNNTTYG 2 cut(s) 1228, 1260
Asp700I GAANNNNTTC 3 cut(s) 998, 1331, 2186
Asp718I GGTACC 1 cut(s) 1476
AspA2I CCTAGG 1 cut(s) 1024
AspLEI GCGC 5 cut(s) 188, 369, 1430, 1432, 1874
AspS9I GGNCC 7 cut(s) 127, 341, 1079, 1583, 1697, 1867, 2196
AsuC2I CCSGG 4 cut(s) 126, 1605, 1606, 1889
AsuHPI GGTGA 9 cut(s) 420, 455, 545, 899, 1301, 1676, 1796, 2094, 2105
AvaI CYCGRG 1 cut(s) 1604
AvaII GGWCC 2 cut(s) 341, 1697
AvrII CCTAGG 1 cut(s) 1024
AxyI CCTNAGG 1 cut(s) 2278
BamHI GGATCC 3 cut(s) 572, 1362, 2294
BanI GGYRCC 1 cut(s) 1476
BbsI GAAGAC 3 cut(s) 462, 483, 1890
BbvI GCAGC 5 cut(s) 1712, 1715, 1732, 2026, 2029
BccI CCATC 3 cut(s) 1138, 1688, 1963
BceAI ACGGC 2 cut(s) 2183, 2221
BcgI CGANNNNNNTGC 6 cut(s) 449, 483, 627, 661, 2055, 2089
BclI TGATCA 2 cut(s) 661, 1618
BcnI CCSGG 4 cut(s) 126, 1605, 1606, 1889
BcoDI GTCTC 8 cut(s) 126, 970, 1014, 1114, 1353, 1728, 2048, 2144
BcuI ACTAGT 1 cut(s) 1645
BfaI CTAG 7 cut(s) 795, 1025, 1200, 1391, 1646, 1742, 2299
BfmI CTRYAG 4 cut(s) 492, 1034, 1375, 1729
BfoI RGCGCY 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 1027
BglI GCCNNNNNGGC 1 cut(s) 1766
BisI GCNGC 7 cut(s) 1082, 1726, 1729, 1746, 1870, 2015, 2018
BlnI CCTAGG 1 cut(s) 1024
BlsI GCNGC 7 cut(s) 1083, 1727, 1730, 1747, 1871, 2016, 2019
Bme1390I CCNGG 4 cut(s) 126, 1605, 1606, 1889
Bme18I GGWCC 2 cut(s) 341, 1697
BmeT110I CYCGRG 1 cut(s) 1604
BmgT120I GGNCC 7 cut(s) 127, 341, 1079, 1583, 1697, 1867, 2196
BmiI GGNNCC 8 cut(s) 574, 1182, 1364, 1478, 1585, 1699, 1868, 2296
BmrFI CCNGG 4 cut(s) 126, 1605, 1606, 1889
BmsI GCATC 3 cut(s) 408, 1441, 1528
BoxI GACNNNNGTC 1 cut(s) 1467
BpiI GAAGAC 3 cut(s) 462, 483, 1890
BpmI CTGGAG 2 cut(s) 960, 1641
BpuEI CTTGAG 2 cut(s) 1674, 2096
BpuMI CCSGG 4 cut(s) 126, 1605, 1606, 1889
Bsa29I ATCGAT 1 cut(s) 357
BsaAI YACGTR 1 cut(s) 2131
BsaHI GRCGYC 2 cut(s) 1637, 1965
BsaI GGTCTC 1 cut(s) 1014
BsaJI CCNNGG 9 cut(s) 231, 1024, 1085, 1156, 1603, 1604, 1605, 1710, 2199
BsaWI WCCGGW 4 cut(s) 414, 440, 722, 1795
BsaXI ACNNNNNCTCC 6 cut(s) 299, 329, 858, 888, 1206, 1236
Bsc4I CCNNNNNNNGG 4 cut(s) 1566, 1631, 1714, 2046
Bse1I ACTGG 3 cut(s) 337, 977, 1658
Bse21I CCTNAGG 1 cut(s) 2278
Bse3DI GCAATG 2 cut(s) 15, 2051
BseAI TCCGGA 3 cut(s) 414, 722, 1795
BseCI ATCGAT 1 cut(s) 357
BseDI CCNNGG 9 cut(s) 231, 1024, 1085, 1156, 1603, 1604, 1605, 1710, 2199
BseGI GGATG 4 cut(s) 423, 1149, 1432, 1621
BseLI CCNNNNNNNGG 4 cut(s) 1566, 1631, 1714, 2046
BseMI GCAATG 2 cut(s) 15, 2051
BseMII CTCAG 2 cut(s) 2262, 2292
BseNI ACTGG 3 cut(s) 337, 977, 1658
BsePI GCGCGC 1 cut(s) 1428
BseRI GAGGAG 2 cut(s) 1909, 2099
BseXI GCAGC 5 cut(s) 1712, 1715, 1732, 2026, 2029
BseYI CCCAGC 2 cut(s) 2061, 2089
BsgI GTGCAG 2 cut(s) 1401, 1505
Bsh1236I CGCG 4 cut(s) 562, 1270, 1430, 1872
BshFI GGCC 5 cut(s) 129, 1081, 1584, 1869, 2198
BshNI GGYRCC 1 cut(s) 1476
BshVI ATCGAT 1 cut(s) 357
BsiHKCI CYCGRG 1 cut(s) 1604
BsiSI CCGG 9 cut(s) 125, 183, 415, 441, 723, 1547, 1605, 1796, 1888
BslFI GGGAC 2 cut(s) 1648, 1904
BslI CCNNNNNNNGG 4 cut(s) 1566, 1631, 1714, 2046
BsmAI GTCTC 8 cut(s) 126, 970, 1014, 1114, 1353, 1728, 2048, 2144
BsmFI GGGAC 2 cut(s) 1648, 1904
BsmI GAATGC 1 cut(s) 1012
BsnI GGCC 5 cut(s) 129, 1081, 1584, 1869, 2198
Bso31I GGTCTC 1 cut(s) 1014
BsoBI CYCGRG 1 cut(s) 1604
Bsp13I TCCGGA 3 cut(s) 414, 722, 1795
Bsp1407I TGTACA 1 cut(s) 1066
BspACI CCGC 8 cut(s) 542, 560, 935, 1082, 1161, 1870, 2001, 2243
BspANI GGCC 5 cut(s) 129, 1081, 1584, 1869, 2198
BspCNI CTCAG 2 cut(s) 2263, 2291
BspDI ATCGAT 1 cut(s) 357
BspEI TCCGGA 3 cut(s) 414, 722, 1795
BspFNI CGCG 4 cut(s) 562, 1270, 1430, 1872
BspLI GGNNCC 8 cut(s) 574, 1182, 1364, 1478, 1585, 1699, 1868, 2296
BspMAI CTGCAG 2 cut(s) 1038, 1733
BspMI ACCTGC 1 cut(s) 1027
BspPI GGATC 9 cut(s) 440, 567, 580, 687, 990, 1357, 1370, 2071, 2289
BspT107I GGYRCC 1 cut(s) 1476
BspTNI GGTCTC 1 cut(s) 1014
BsrDI GCAATG 2 cut(s) 15, 2051
BsrGI TGTACA 1 cut(s) 1066
BsrI ACTGG 3 cut(s) 337, 977, 1658
BssECI CCNNGG 9 cut(s) 231, 1024, 1085, 1156, 1603, 1604, 1605, 1710, 2199
BssHII GCGCGC 1 cut(s) 1428
BssNI GRCGYC 2 cut(s) 1637, 1965
BssT1I CCWWGG 4 cut(s) 231, 1024, 1085, 1710
Bst4CI ACNGT 5 cut(s) 1262, 1407, 1841, 1895, 2138
Bst6I CTCTTC 3 cut(s) 217, 217, 2177
BstACI GRCGYC 2 cut(s) 1637, 1965
BstAPI GCANNNNNTGC 1 cut(s) 1737
BstAUI TGTACA 1 cut(s) 1066
BstBAI YACGTR 1 cut(s) 2131
BstC8I GCNNGC 3 cut(s) 371, 513, 1430
BstDEI CTNAG 5 cut(s) 617, 893, 1751, 2271, 2278
BstDSI CCRYGG 1 cut(s) 2199
BstENI CCTNNNNNAGG 1 cut(s) 1564
BstF5I GGATG 4 cut(s) 423, 1149, 1432, 1621
BstFNI CGCG 4 cut(s) 562, 1270, 1430, 1872
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 5 cut(s) 188, 369, 1430, 1432, 1874
BstMAI GTCTC 8 cut(s) 126, 970, 1014, 1114, 1353, 1728, 2048, 2144
BstMWI GCNNNNNNNGC 4 cut(s) 622, 1276, 1737, 1766
BstNSI RCATGY 1 cut(s) 515
BstPAI GACNNNNGTC 1 cut(s) 1467
BstSCI CCNGG 4 cut(s) 124, 1603, 1604, 1887
BstSFI CTRYAG 4 cut(s) 492, 1034, 1375, 1729
BstUI CGCG 4 cut(s) 562, 1270, 1430, 1872
BstV1I GCAGC 5 cut(s) 1712, 1715, 1732, 2026, 2029
BstV2I GAAGAC 3 cut(s) 462, 483, 1890
BstX2I RGATCY 3 cut(s) 572, 1362, 2294
BstXI CCANNNNNNTGG 1 cut(s) 1863
BstYI RGATCY 3 cut(s) 572, 1362, 2294
Bsu15I ATCGAT 1 cut(s) 357
Bsu36I CCTNAGG 1 cut(s) 2278
BsuRI GGCC 5 cut(s) 129, 1081, 1584, 1869, 2198
BsuTUI ATCGAT 1 cut(s) 357
BtgI CCRYGG 1 cut(s) 2199
BtsCI GGATG 4 cut(s) 423, 1149, 1432, 1621
BtsIMutI CAGTG 3 cut(s) 984, 1267, 1846
BveI ACCTGC 1 cut(s) 1027
Cac8I GCNNGC 3 cut(s) 371, 513, 1430
CaiI CAGNNNCTG 2 cut(s) 332, 1737
CfoI GCGC 5 cut(s) 188, 369, 1430, 1432, 1874
Cfr13I GGNCC 7 cut(s) 127, 341, 1079, 1583, 1697, 1867, 2196
Cfr9I CCCGGG 1 cut(s) 1604
ClaI ATCGAT 1 cut(s) 357
CseI GACGC 2 cut(s) 1645, 1973
Csp6I GTAC 5 cut(s) 925, 1040, 1067, 1340, 1477
CviQI GTAC 5 cut(s) 925, 1040, 1067, 1340, 1477
DdeI CTNAG 5 cut(s) 617, 893, 1751, 2271, 2278
DraI TTTAAA 2 cut(s) 706, 1275
Eam1104I CTCTTC 3 cut(s) 217, 217, 2177
EarI CTCTTC 3 cut(s) 217, 217, 2177
Eco130I CCWWGG 4 cut(s) 231, 1024, 1085, 1710
Eco31I GGTCTC 1 cut(s) 1014
Eco32I GATATC 1 cut(s) 645
Eco47I GGWCC 2 cut(s) 341, 1697
Eco57I CTGAAG 4 cut(s) 174, 981, 1115, 1919
Eco81I CCTNAGG 1 cut(s) 2278
Eco88I CYCGRG 1 cut(s) 1604
EcoNI CCTNNNNNAGG 1 cut(s) 1564
EcoRI GAATTC 1 cut(s) 310
EcoRV GATATC 1 cut(s) 645
EcoT14I CCWWGG 4 cut(s) 231, 1024, 1085, 1710
EcoT22I ATGCAT 1 cut(s) 517
ErhI CCWWGG 4 cut(s) 231, 1024, 1085, 1710
FalI AAGNNNNNCTT 2 cut(s) 468, 500
FaqI GGGAC 2 cut(s) 1648, 1904
FauI CCCGC 2 cut(s) 1154, 1994
FauNDI CATATG 2 cut(s) 1678, 2174
FbaI TGATCA 2 cut(s) 661, 1618
Fnu4HI GCNGC 7 cut(s) 1082, 1726, 1729, 1746, 1870, 2015, 2018
FokI GGATG 4 cut(s) 430, 1156, 1419, 1608
Fsp4HI GCNGC 7 cut(s) 1082, 1726, 1729, 1746, 1870, 2015, 2018
FspBI CTAG 7 cut(s) 795, 1025, 1200, 1391, 1646, 1742, 2299
FspI TGCGCA 1 cut(s) 368
GlaI GCGC 5 cut(s) 187, 368, 1429, 1431, 1873
GluI GCNGC 7 cut(s) 1082, 1726, 1729, 1746, 1870, 2015, 2018
GsaI CCCAGC 2 cut(s) 2065, 2093
GsuI CTGGAG 2 cut(s) 960, 1641
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 5 cut(s) 129, 1081, 1584, 1869, 2198
HapII CCGG 9 cut(s) 125, 183, 415, 441, 723, 1547, 1605, 1796, 1888
HgaI GACGC 2 cut(s) 1645, 1973
HhaI GCGC 5 cut(s) 188, 369, 1430, 1432, 1874
Hin1I GRCGYC 2 cut(s) 1637, 1965
Hin6I GCGC 5 cut(s) 186, 367, 1428, 1430, 1872
HinP1I GCGC 5 cut(s) 186, 367, 1428, 1430, 1872
HincII GTYRAC 4 cut(s) 265, 1231, 1413, 1819
HindII GTYRAC 4 cut(s) 265, 1231, 1413, 1819
HindIII AAGCTT 2 cut(s) 371, 1277
HpaII CCGG 9 cut(s) 125, 183, 415, 441, 723, 1547, 1605, 1796, 1888
HphI GGTGA 9 cut(s) 420, 455, 545, 899, 1301, 1676, 1796, 2094, 2105
Hpy188I TCNGA 6 cut(s) 153, 307, 1134, 1401, 1437, 1963
HpyAV CCTTC 5 cut(s) 494, 589, 1133, 1139, 2254
HpyCH4III ACNGT 5 cut(s) 1262, 1407, 1841, 1895, 2138
HpyCH4IV ACGT 4 cut(s) 1851, 2130, 2249, 2265
HpyF10VI GCNNNNNNNGC 4 cut(s) 622, 1276, 1737, 1766
HpyF3I CTNAG 5 cut(s) 617, 893, 1751, 2271, 2278
HpySE526I ACGT 4 cut(s) 1851, 2130, 2249, 2265
Hsp92I GRCGYC 2 cut(s) 1637, 1965
HspAI GCGC 5 cut(s) 186, 367, 1428, 1430, 1872
Kpn2I TCCGGA 3 cut(s) 414, 722, 1795
KpnI GGTACC 1 cut(s) 1480
Ksp22I TGATCA 2 cut(s) 661, 1618
Lsp1109I GCAGC 5 cut(s) 1712, 1715, 1732, 2026, 2029
LweI GCATC 3 cut(s) 408, 1441, 1528
MaeI CTAG 7 cut(s) 795, 1025, 1200, 1391, 1646, 1742, 2299
MaeII ACGT 4 cut(s) 1851, 2130, 2249, 2265
MaeIII GTNAC 2 cut(s) 1648, 2245
MflI RGATCY 3 cut(s) 572, 1362, 2294
MlyI GAGTC 4 cut(s) 1355, 1477, 2018, 2282
MmeI TCCRAC 5 cut(s) 453, 1424, 1460, 1801, 2104
Mph1103I ATGCAT 1 cut(s) 517
MroI TCCGGA 3 cut(s) 414, 722, 1795
MroXI GAANNNNTTC 3 cut(s) 998, 1331, 2186
MseI TTAA 6 cut(s) 705, 813, 876, 908, 1274, 1281
MspA1I CMGCKG 1 cut(s) 2089
MspI CCGG 9 cut(s) 125, 183, 415, 441, 723, 1547, 1605, 1796, 1888
MspR9I CCNGG 4 cut(s) 126, 1605, 1606, 1889
MssI GTTTAAAC 1 cut(s) 706
Mva1269I GAATGC 1 cut(s) 1012
MvnI CGCG 4 cut(s) 562, 1270, 1430, 1872
MwoI GCNNNNNNNGC 4 cut(s) 622, 1276, 1737, 1766
NciI CCSGG 4 cut(s) 126, 1605, 1606, 1889
NdeI CATATG 2 cut(s) 1678, 2174
NlaIV GGNNCC 8 cut(s) 574, 1182, 1364, 1478, 1585, 1699, 1868, 2296
NmeAIII GCCGAG 1 cut(s) 1137
NmuCI GTSAC 1 cut(s) 1648
NsbI TGCGCA 1 cut(s) 368
NsiI ATGCAT 1 cut(s) 517
NspI RCATGY 1 cut(s) 515
PaeI GCATGC 1 cut(s) 515
PauI GCGCGC 1 cut(s) 1428
PcsI WCGNNNNNNNCGW 1 cut(s) 311
PctI GAATGC 1 cut(s) 1012
PdmI GAANNNNTTC 3 cut(s) 998, 1331, 2186
PfeI GAWTC 6 cut(s) 41, 323, 854, 1114, 2033, 2187
PkrI GCNGC 7 cut(s) 1083, 1727, 1730, 1747, 1871, 2016, 2019
PleI GAGTC 4 cut(s) 1354, 1476, 2018, 2281
PmeI GTTTAAAC 1 cut(s) 706
PpsI GAGTC 4 cut(s) 1354, 1476, 2018, 2281
Ppu21I YACGTR 1 cut(s) 2131
PshAI GACNNNNGTC 1 cut(s) 1467
PsiI TTATAA 1 cut(s) 353
Psp1406I AACGTT 1 cut(s) 2249
PspFI CCCAGC 2 cut(s) 2061, 2089
PspN4I GGNNCC 8 cut(s) 574, 1182, 1364, 1478, 1585, 1699, 1868, 2296
PspPI GGNCC 7 cut(s) 127, 341, 1079, 1583, 1697, 1867, 2196
PstI CTGCAG 2 cut(s) 1038, 1733
PstNI CAGNNNCTG 2 cut(s) 332, 1737
PsuI RGATCY 3 cut(s) 572, 1362, 2294
PteI GCGCGC 1 cut(s) 1428
PvuII CAGCTG 1 cut(s) 2089
RsaI GTAC 5 cut(s) 926, 1041, 1068, 1341, 1478
RsaNI GTAC 5 cut(s) 925, 1040, 1067, 1340, 1477
SaqAI TTAA 6 cut(s) 705, 813, 876, 908, 1274, 1281
SatI GCNGC 7 cut(s) 1082, 1726, 1729, 1746, 1870, 2015, 2018
Sau96I GGNCC 7 cut(s) 127, 341, 1079, 1583, 1697, 1867, 2196
SchI GAGTC 4 cut(s) 1355, 1477, 2018, 2282
ScrFI CCNGG 4 cut(s) 126, 1605, 1606, 1889
SfaNI GCATC 3 cut(s) 408, 1441, 1528
SfcI CTRYAG 4 cut(s) 492, 1034, 1375, 1729
SinI GGWCC 2 cut(s) 341, 1697
SmaI CCCGGG 1 cut(s) 1606
SmlI CTYRAG 2 cut(s) 1689, 2111
SmoI CTYRAG 2 cut(s) 1689, 2111
SpeI ACTAGT 1 cut(s) 1645
SphI GCATGC 1 cut(s) 515
SsiI CCGC 8 cut(s) 542, 560, 935, 1082, 1161, 1870, 2001, 2243
SspI AATATT 1 cut(s) 1541
SspMI CTAG 7 cut(s) 795, 1025, 1200, 1391, 1646, 1742, 2299
StyD4I CCNGG 4 cut(s) 124, 1603, 1604, 1887
StyI CCWWGG 4 cut(s) 231, 1024, 1085, 1710
TaaI ACNGT 5 cut(s) 1262, 1407, 1841, 1895, 2138
TaiI ACGT 4 cut(s) 1854, 2133, 2252, 2268
TatI WGTACW 2 cut(s) 1066, 1339
TauI GCSGC 2 cut(s) 1084, 1872
TfiI GAWTC 6 cut(s) 41, 323, 854, 1114, 2033, 2187
Tru1I TTAA 6 cut(s) 705, 813, 876, 908, 1274, 1281
Tru9I TTAA 6 cut(s) 705, 813, 876, 908, 1274, 1281
TscAI CASTG 3 cut(s) 984, 1267, 1846
TseFI GTSAC 1 cut(s) 1648
TseI GCWGC 5 cut(s) 1725, 1728, 1745, 2014, 2017
Tsp45I GTSAC 1 cut(s) 1648
TspDTI ATGAA 7 cut(s) 26, 375, 468, 476, 770, 1092, 1665
TspGWI ACGGA 5 cut(s) 154, 739, 879, 958, 1614
TspMI CCCGGG 1 cut(s) 1604
TspRI CASTG 3 cut(s) 984, 1267, 1846
VpaK11BI GGWCC 2 cut(s) 341, 1697
XagI CCTNNNNNAGG 1 cut(s) 1564
XapI RAATTY 2 cut(s) 310, 998
XbaI TCTAGA 1 cut(s) 1390
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 137
XmaI CCCGGG 1 cut(s) 1604
XmaJI CCTAGG 1 cut(s) 1024
XmnI GAANNNNTTC 3 cut(s) 998, 1331, 2186
XspI CTAG 7 cut(s) 795, 1025, 1200, 1391, 1646, 1742, 2299
Zsp2I ATGCAT 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.