Belongs to the SecY SEC61-alpha family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G29310 AT1G29310 AT2G34250 AT2G34250 AT2G34250 |
| fragaria_vesca | FvH4_3g18150 |
| malus_domestica | MD11G1265500.v1.1 |
| prunus_persica | Prupe.4G160300_v2.0.a1 Prupe.8G009900_v2.0.a1 |
| pyrus_communis | pycom11g23350 |
| rosa_chinensis | RchiOBHm_Chr5g0030581 |
| rosa_laevigata | RLG00000033229 |
| rosa_multiflora | Rmu_ssc0000336.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00049720 |
| rosa_rugosa | Rorug05G0118500 |
| rosa_samantha | Rh5AG210800 Rh5BG209900 Rh5CG233600 Rh5DG214400 |
| rosa_wichuraiana | Rw5G019290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1215 |
| AccII | CGCG | 2 cut(s) | 182, 327 |
| AciI | CCGC | 3 cut(s) | 182, 948, 1249 |
| AclWI | GGATC | 8 cut(s) | 179, 192, 254, 807, 1152, 1165, 1339, 1352 |
| AcoI | YGGCCR | 1 cut(s) | 430 |
| AcsI | RAATTY | 3 cut(s) | 162, 543, 952 |
| AcuI | CTGAAG | 1 cut(s) | 500 |
| AfaI | GTAC | 4 cut(s) | 419, 944, 995, 1376 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 28, 158, 225, 714, 1022 |
| AgsI | TTSAA | 3 cut(s) | 638, 1053, 1148 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 899, 931 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 996, 1028 |
| Alw21I | GWGCWC | 4 cut(s) | 340, 355, 697, 1413 |
| Alw26I | GTCTC | 2 cut(s) | 907, 1376 |
| AlwI | GGATC | 8 cut(s) | 179, 192, 254, 807, 1152, 1165, 1339, 1352 |
| Ama87I | CYCGRG | 1 cut(s) | 1211 |
| AoxI | GGCC | 3 cut(s) | 35, 430, 705 |
| ApeKI | GCWGC | 5 cut(s) | 280, 1070, 1183, 1265, 1268 |
| ApoI | RAATTY | 3 cut(s) | 162, 543, 952 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 513, 593 |
| AspLEI | GCGC | 3 cut(s) | 71, 182, 327 |
| AspS9I | GGNCC | 3 cut(s) | 19, 36, 331 |
| AsuC2I | CCSGG | 3 cut(s) | 292, 1212, 1213 |
| AsuHPI | GGTGA | 5 cut(s) | 43, 241, 286, 398, 1216 |
| AvaI | CYCGRG | 1 cut(s) | 1211 |
| AvaII | GGWCC | 2 cut(s) | 19, 331 |
| BaeGI | GKGCMC | 2 cut(s) | 1126, 1218 |
| BalI | TGGCCA | 1 cut(s) | 432 |
| BamHI | GGATCC | 3 cut(s) | 184, 1157, 1344 |
| BanI | GGYRCC | 1 cut(s) | 1215 |
| BanII | GRGCYC | 1 cut(s) | 1413 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 89, 121 |
| Bbv12I | GWGCWC | 4 cut(s) | 340, 355, 697, 1413 |
| BbvI | GCAGC | 5 cut(s) | 292, 1082, 1195, 1252, 1280 |
| BccI | CCATC | 5 cut(s) | 461, 617, 669, 887, 1370 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BciVI | GTATCC | 1 cut(s) | 380 |
| BclI | TGATCA | 1 cut(s) | 669 |
| BcnI | CCSGG | 3 cut(s) | 292, 1212, 1213 |
| BcoDI | GTCTC | 2 cut(s) | 907, 1376 |
| BfaI | CTAG | 2 cut(s) | 1028, 1100 |
| BfmI | CTRYAG | 2 cut(s) | 1017, 1266 |
| BfoI | RGCGCY | 1 cut(s) | 72 |
| BfuI | GTATCC | 1 cut(s) | 380 |
| BisI | GCNGC | 5 cut(s) | 281, 1071, 1184, 1266, 1269 |
| BlpI | GCTNAGC | 1 cut(s) | 1057 |
| BlsI | GCNGC | 5 cut(s) | 282, 1072, 1185, 1267, 1270 |
| BmcAI | AGTACT | 2 cut(s) | 995, 1376 |
| Bme1390I | CCNGG | 3 cut(s) | 292, 1212, 1213 |
| Bme18I | GGWCC | 2 cut(s) | 19, 331 |
| BmeT110I | CYCGRG | 1 cut(s) | 1211 |
| BmgT120I | GGNCC | 3 cut(s) | 19, 36, 331 |
| BmiI | GGNNCC | 6 cut(s) | 20, 186, 791, 1159, 1217, 1346 |
| BmrFI | CCNGG | 3 cut(s) | 292, 1212, 1213 |
| BmsI | GCATC | 3 cut(s) | 189, 267, 1197 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1057 |
| BpuEI | CTTGAG | 1 cut(s) | 1172 |
| BpuMI | CCSGG | 3 cut(s) | 292, 1212, 1213 |
| BsaJI | CCNNGG | 4 cut(s) | 784, 826, 1167, 1211 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 28, 158, 225, 714, 1022 |
| Bse118I | RCCGGY | 3 cut(s) | 176, 482, 714 |
| Bse1I | ACTGG | 1 cut(s) | 1404 |
| Bse3DI | GCAATG | 1 cut(s) | 555 |
| BseDI | CCNNGG | 4 cut(s) | 784, 826, 1167, 1211 |
| BseGI | GGATG | 6 cut(s) | 204, 453, 465, 511, 866, 1177 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 28, 158, 225, 714, 1022 |
| BseMI | GCAATG | 1 cut(s) | 555 |
| BseMII | CTCAG | 3 cut(s) | 621, 981, 1011 |
| BseNI | ACTGG | 1 cut(s) | 1404 |
| BseRI | GAGGAG | 2 cut(s) | 275, 639 |
| BseSI | GKGCMC | 2 cut(s) | 1126, 1218 |
| BseXI | GCAGC | 5 cut(s) | 292, 1082, 1195, 1252, 1280 |
| BsgI | GTGCAG | 3 cut(s) | 160, 663, 879 |
| Bsh1236I | CGCG | 2 cut(s) | 182, 327 |
| BshFI | GGCC | 3 cut(s) | 37, 432, 707 |
| BshNI | GGYRCC | 1 cut(s) | 1215 |
| BsiHKAI | GWGCWC | 4 cut(s) | 340, 355, 697, 1413 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1211 |
| BsiSI | CCGG | 6 cut(s) | 56, 177, 291, 483, 715, 1212 |
| BslFI | GGGAC | 2 cut(s) | 68, 241 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 28, 158, 225, 714, 1022 |
| BsmAI | GTCTC | 2 cut(s) | 907, 1376 |
| BsmFI | GGGAC | 2 cut(s) | 68, 241 |
| BsmI | GAATGC | 1 cut(s) | 826 |
| BsnI | GGCC | 3 cut(s) | 37, 432, 707 |
| BsoBI | CYCGRG | 1 cut(s) | 1211 |
| Bsp1286I | GDGCHC | 6 cut(s) | 340, 355, 697, 1126, 1218, 1413 |
| Bsp143I | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1057 |
| BspACI | CCGC | 3 cut(s) | 182, 948, 1249 |
| BspANI | GGCC | 3 cut(s) | 37, 432, 707 |
| BspCNI | CTCAG | 3 cut(s) | 622, 982, 1010 |
| BspFNI | CGCG | 2 cut(s) | 182, 327 |
| BspLI | GGNNCC | 6 cut(s) | 20, 186, 791, 1159, 1217, 1346 |
| BspMAI | CTGCAG | 1 cut(s) | 1270 |
| BspPI | GGATC | 8 cut(s) | 179, 192, 254, 807, 1152, 1165, 1339, 1352 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BspT107I | GGYRCC | 1 cut(s) | 1215 |
| BsrDI | GCAATG | 1 cut(s) | 555 |
| BsrFI | RCCGGY | 3 cut(s) | 176, 482, 714 |
| BsrI | ACTGG | 1 cut(s) | 1404 |
| BssAI | RCCGGY | 3 cut(s) | 176, 482, 714 |
| BssECI | CCNNGG | 4 cut(s) | 784, 826, 1167, 1211 |
| BssMI | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| BssT1I | CCWWGG | 2 cut(s) | 784, 1167 |
| Bst4CI | ACNGT | 9 cut(s) | 112, 232, 335, 422, 617, 754, 927, 1220, 1303 |
| Bst6I | CTCTTC | 3 cut(s) | 128, 662, 1097 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 650 |
| BstC8I | GCNNGC | 2 cut(s) | 747, 1353 |
| BstDEI | CTNAG | 4 cut(s) | 630, 990, 997, 1057 |
| BstDSI | CCRYGG | 1 cut(s) | 826 |
| BstF5I | GGATG | 6 cut(s) | 204, 453, 465, 511, 866, 1177 |
| BstFNI | CGCG | 2 cut(s) | 182, 327 |
| BstH2I | RGCGCY | 1 cut(s) | 72 |
| BstHHI | GCGC | 3 cut(s) | 71, 182, 327 |
| BstKTI | GATC | 8 cut(s) | 117, 187, 249, 672, 762, 815, 1160, 1347 |
| BstMAI | GTCTC | 2 cut(s) | 907, 1376 |
| BstMBI | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 277, 650, 1067, 1240 |
| BstNSI | RCATGY | 4 cut(s) | 418, 877, 1122, 1285 |
| BstSCI | CCNGG | 3 cut(s) | 290, 1210, 1211 |
| BstSFI | CTRYAG | 2 cut(s) | 1017, 1266 |
| BstSLI | GKGCMC | 2 cut(s) | 1126, 1218 |
| BstUI | CGCG | 2 cut(s) | 182, 327 |
| BstV1I | GCAGC | 5 cut(s) | 292, 1082, 1195, 1252, 1280 |
| BstX2I | RGATCY | 4 cut(s) | 184, 812, 1157, 1344 |
| BstYI | RGATCY | 4 cut(s) | 184, 812, 1157, 1344 |
| BsuI | GTATCC | 1 cut(s) | 380 |
| BsuRI | GGCC | 3 cut(s) | 37, 432, 707 |
| BtgI | CCRYGG | 1 cut(s) | 826 |
| BtsCI | GGATG | 6 cut(s) | 204, 453, 465, 511, 866, 1177 |
| BtsI | GCAGTG | 1 cut(s) | 1362 |
| BtsIMutI | CAGTG | 5 cut(s) | 108, 622, 1308, 1362, 1411 |
| Cac8I | GCNNGC | 2 cut(s) | 747, 1353 |
| CfoI | GCGC | 3 cut(s) | 71, 182, 327 |
| Cfr10I | RCCGGY | 3 cut(s) | 176, 482, 714 |
| Cfr13I | GGNCC | 3 cut(s) | 19, 36, 331 |
| Cfr9I | CCCGGG | 1 cut(s) | 1211 |
| Csp6I | GTAC | 4 cut(s) | 418, 943, 994, 1375 |
| CviAII | CATG | 8 cut(s) | 235, 415, 874, 1085, 1119, 1140, 1282, 1318 |
| CviQI | GTAC | 4 cut(s) | 418, 943, 994, 1375 |
| DdeI | CTNAG | 4 cut(s) | 630, 990, 997, 1057 |
| DpnI | GATC | 8 cut(s) | 116, 186, 248, 671, 761, 814, 1159, 1346 |
| DpnII | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| EaeI | YGGCCR | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 3 cut(s) | 128, 662, 1097 |
| EarI | CTCTTC | 3 cut(s) | 128, 662, 1097 |
| Ecl136II | GAGCTC | 1 cut(s) | 1411 |
| Eco130I | CCWWGG | 2 cut(s) | 784, 1167 |
| Eco147I | AGGCCT | 1 cut(s) | 707 |
| Eco24I | GRGCYC | 1 cut(s) | 1413 |
| Eco47I | GGWCC | 2 cut(s) | 19, 331 |
| Eco53kI | GAGCTC | 1 cut(s) | 1411 |
| Eco57I | CTGAAG | 1 cut(s) | 500 |
| Eco88I | CYCGRG | 1 cut(s) | 1211 |
| EcoICRI | GAGCTC | 1 cut(s) | 1411 |
| EcoO109I | RGGNCCY | 2 cut(s) | 19, 36 |
| EcoRI | GAATTC | 1 cut(s) | 162 |
| EcoT14I | CCWWGG | 2 cut(s) | 784, 1167 |
| EcoT38I | GRGCYC | 1 cut(s) | 1413 |
| ErhI | CCWWGG | 2 cut(s) | 784, 1167 |
| FaeI | CATG | 8 cut(s) | 238, 418, 877, 1088, 1122, 1143, 1285, 1321 |
| FaqI | GGGAC | 2 cut(s) | 68, 241 |
| FatI | CATG | 8 cut(s) | 234, 414, 873, 1084, 1118, 1139, 1281, 1317 |
| FauNDI | CATATG | 1 cut(s) | 400 |
| FbaI | TGATCA | 1 cut(s) | 669 |
| Fnu4HI | GCNGC | 5 cut(s) | 281, 1071, 1184, 1266, 1269 |
| FokI | GGATG | 6 cut(s) | 211, 440, 452, 518, 853, 1184 |
| FriOI | GRGCYC | 1 cut(s) | 1413 |
| Fsp4HI | GCNGC | 5 cut(s) | 281, 1071, 1184, 1266, 1269 |
| FspBI | CTAG | 2 cut(s) | 1028, 1100 |
| GlaI | GCGC | 3 cut(s) | 70, 181, 326 |
| GluI | GCNGC | 5 cut(s) | 281, 1071, 1184, 1266, 1269 |
| HaeII | RGCGCY | 1 cut(s) | 72 |
| HaeIII | GGCC | 3 cut(s) | 37, 432, 707 |
| HapII | CCGG | 6 cut(s) | 56, 177, 291, 483, 715, 1212 |
| HhaI | GCGC | 3 cut(s) | 71, 182, 327 |
| Hin1II | CATG | 8 cut(s) | 238, 418, 877, 1088, 1122, 1143, 1285, 1321 |
| Hin6I | GCGC | 3 cut(s) | 69, 180, 325 |
| HinP1I | GCGC | 3 cut(s) | 69, 180, 325 |
| HincII | GTYRAC | 1 cut(s) | 313 |
| HindII | GTYRAC | 1 cut(s) | 313 |
| HindIII | AAGCTT | 1 cut(s) | 1054 |
| HinfI | GANTC | 4 cut(s) | 721, 964, 986, 1223 |
| HpaII | CCGG | 6 cut(s) | 56, 177, 291, 483, 715, 1212 |
| HphI | GGTGA | 5 cut(s) | 43, 241, 286, 398, 1216 |
| Hpy166II | GTNNAC | 3 cut(s) | 313, 830, 1004 |
| Hpy188I | TCNGA | 6 cut(s) | 66, 92, 440, 519, 812, 991 |
| Hpy188III | TCNNGA | 9 cut(s) | 373, 540, 586, 701, 757, 1155, 1335, 1381, 1390 |
| Hpy8I | GTNNAC | 3 cut(s) | 313, 830, 1004 |
| HpyAV | CCTTC | 9 cut(s) | 32, 49, 91, 514, 583, 632, 976, 1059, 1231 |
| HpyCH4III | ACNGT | 9 cut(s) | 112, 232, 335, 422, 617, 754, 927, 1220, 1303 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 277, 650, 1067, 1240 |
| HpyF3I | CTNAG | 4 cut(s) | 630, 990, 997, 1057 |
| Hsp92II | CATG | 8 cut(s) | 238, 418, 877, 1088, 1122, 1143, 1285, 1321 |
| HspAI | GCGC | 3 cut(s) | 69, 180, 325 |
| Ksp22I | TGATCA | 1 cut(s) | 669 |
| Kzo9I | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| LmnI | GCTCC | 6 cut(s) | 153, 238, 288, 350, 626, 1240 |
| Lsp1109I | GCAGC | 5 cut(s) | 292, 1082, 1195, 1252, 1280 |
| LweI | GCATC | 3 cut(s) | 189, 267, 1197 |
| MaeI | CTAG | 2 cut(s) | 1028, 1100 |
| MaeIII | GTNAC | 3 cut(s) | 259, 733, 1357 |
| MalI | GATC | 8 cut(s) | 116, 186, 248, 671, 761, 814, 1159, 1346 |
| MboI | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| MboII | GAAGA | 7 cut(s) | 115, 310, 506, 649, 716, 754, 1084 |
| MfeI | CAATTG | 1 cut(s) | 1326 |
| MflI | RGATCY | 4 cut(s) | 184, 812, 1157, 1344 |
| MhlI | GDGCHC | 6 cut(s) | 340, 355, 697, 1126, 1218, 1413 |
| MlsI | TGGCCA | 1 cut(s) | 432 |
| MluCI | AATT | 5 cut(s) | 162, 543, 952, 1007, 1326 |
| MluNI | TGGCCA | 1 cut(s) | 432 |
| MlyI | GAGTC | 1 cut(s) | 1232 |
| MmeI | TCCRAC | 2 cut(s) | 894, 930 |
| Mox20I | TGGCCA | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 2 cut(s) | 513, 593 |
| MscI | TGGCCA | 1 cut(s) | 432 |
| Msp20I | TGGCCA | 1 cut(s) | 432 |
| MspA1I | CMGCKG | 2 cut(s) | 948, 1265 |
| MspI | CCGG | 6 cut(s) | 56, 177, 291, 483, 715, 1212 |
| MspR9I | CCNGG | 3 cut(s) | 292, 1212, 1213 |
| MunI | CAATTG | 1 cut(s) | 1326 |
| Mva1269I | GAATGC | 1 cut(s) | 826 |
| MvnI | CGCG | 2 cut(s) | 182, 327 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 277, 650, 1067, 1240 |
| NciI | CCSGG | 3 cut(s) | 292, 1212, 1213 |
| NdeI | CATATG | 1 cut(s) | 400 |
| NdeII | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| NlaIII | CATG | 8 cut(s) | 238, 418, 877, 1088, 1122, 1143, 1285, 1321 |
| NlaIV | GGNNCC | 6 cut(s) | 20, 186, 791, 1159, 1217, 1346 |
| NmuCI | GTSAC | 3 cut(s) | 259, 733, 1357 |
| NspI | RCATGY | 4 cut(s) | 418, 877, 1122, 1285 |
| PceI | AGGCCT | 1 cut(s) | 707 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1386 |
| PctI | GAATGC | 1 cut(s) | 826 |
| PdmI | GAANNNNTTC | 2 cut(s) | 513, 593 |
| PfeI | GAWTC | 3 cut(s) | 721, 964, 986 |
| PkrI | GCNGC | 5 cut(s) | 282, 1072, 1185, 1267, 1270 |
| PleI | GAGTC | 1 cut(s) | 1231 |
| PpsI | GAGTC | 1 cut(s) | 1231 |
| PpuMI | RGGWCCY | 1 cut(s) | 19 |
| Psp124BI | GAGCTC | 1 cut(s) | 1413 |
| Psp5II | RGGWCCY | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 6 cut(s) | 20, 186, 791, 1159, 1217, 1346 |
| PspPI | GGNCC | 3 cut(s) | 19, 36, 331 |
| PspPPI | RGGWCCY | 1 cut(s) | 19 |
| PstI | CTGCAG | 1 cut(s) | 1270 |
| PsuI | RGATCY | 4 cut(s) | 184, 812, 1157, 1344 |
| PvuII | CAGCTG | 1 cut(s) | 1265 |
| RsaI | GTAC | 4 cut(s) | 419, 944, 995, 1376 |
| RsaNI | GTAC | 4 cut(s) | 418, 943, 994, 1375 |
| SacI | GAGCTC | 1 cut(s) | 1413 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| SatI | GCNGC | 5 cut(s) | 281, 1071, 1184, 1266, 1269 |
| Sau3AI | GATC | 8 cut(s) | 114, 184, 246, 669, 759, 812, 1157, 1344 |
| Sau96I | GGNCC | 3 cut(s) | 19, 36, 331 |
| ScaI | AGTACT | 2 cut(s) | 995, 1376 |
| SchI | GAGTC | 1 cut(s) | 1232 |
| ScrFI | CCNGG | 3 cut(s) | 292, 1212, 1213 |
| SduI | GDGCHC | 6 cut(s) | 340, 355, 697, 1126, 1218, 1413 |
| SfaNI | GCATC | 3 cut(s) | 189, 267, 1197 |
| SfcI | CTRYAG | 2 cut(s) | 1017, 1266 |
| SinI | GGWCC | 2 cut(s) | 19, 331 |
| SmaI | CCCGGG | 1 cut(s) | 1213 |
| SmlI | CTYRAG | 1 cut(s) | 1187 |
| SmoI | CTYRAG | 1 cut(s) | 1187 |
| SrfI | GCCCGGGC | 1 cut(s) | 1213 |
| Sse9I | AATT | 5 cut(s) | 162, 543, 952, 1007, 1326 |
| SseBI | AGGCCT | 1 cut(s) | 707 |
| SsiI | CCGC | 3 cut(s) | 182, 948, 1249 |
| SspMI | CTAG | 2 cut(s) | 1028, 1100 |
| SstI | GAGCTC | 1 cut(s) | 1413 |
| StuI | AGGCCT | 1 cut(s) | 707 |
| StyD4I | CCNGG | 3 cut(s) | 290, 1210, 1211 |
| StyI | CCWWGG | 2 cut(s) | 784, 1167 |
| TaaI | ACNGT | 9 cut(s) | 112, 232, 335, 422, 617, 754, 927, 1220, 1303 |
| TaqI | TCGA | 5 cut(s) | 296, 676, 691, 1380, 1389 |
| TasI | AATT | 5 cut(s) | 162, 543, 952, 1007, 1326 |
| TatI | WGTACW | 2 cut(s) | 993, 1374 |
| TfiI | GAWTC | 3 cut(s) | 721, 964, 986 |
| TscAI | CASTG | 5 cut(s) | 115, 622, 1308, 1362, 1411 |
| TseFI | GTSAC | 3 cut(s) | 259, 733, 1357 |
| TseI | GCWGC | 5 cut(s) | 280, 1070, 1183, 1265, 1268 |
| Tsp45I | GTSAC | 3 cut(s) | 259, 733, 1357 |
| TspDTI | ATGAA | 7 cut(s) | 14, 115, 522, 544, 907, 1073, 1306 |
| TspGWI | ACGGA | 2 cut(s) | 177, 782 |
| TspMI | CCCGGG | 1 cut(s) | 1211 |
| TspRI | CASTG | 5 cut(s) | 115, 622, 1308, 1362, 1411 |
| VpaK11BI | GGWCC | 2 cut(s) | 19, 331 |
| XapI | RAATTY | 3 cut(s) | 162, 543, 952 |
| XceI | RCATGY | 4 cut(s) | 418, 877, 1122, 1285 |
| XmaI | CCCGGG | 1 cut(s) | 1211 |
| XmnI | GAANNNNTTC | 2 cut(s) | 513, 593 |
| XspI | CTAG | 2 cut(s) | 1028, 1100 |
| ZrmI | AGTACT | 2 cut(s) | 995, 1376 |