FvH4_3g18290

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0016004
Physical Location & Seq
Reverse (-)
11689971 .. 11691800
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18290.t1

Sequence Viewer

Length: 1830 bp
ATGGACCCTTCCCTCAGTAAAACCCTAAACCCTTCCCTCTCTCTCCTCGCCCCATTTCCGAACCCTCTCCGCCAAACCCTTACCTTCAAGCCTCTCAACCCCCATAAACACTTCTCCATCAGAGCCGTCTCCCAATTCCCCCAAATTTCCGGCCCCAATTTCACATTTTCCCGCCAAATTCCGAGGGACCTGCGCGCGTTCGCCGGCCGGAGCAAGAAGAAGGCCGGAGGAGGTCAAGGAGGCTCCACCGGAGACGGCCGAATCGATGCGAACTCCGAGTTTCGCAAGGCGGCGAAGAGAAACGCTCGCCGGAAAACCAAGAAGCTCGCCGAGTCGATGTTCTACCGGCTCAAGAACCCTCACCGGAACTACCCGGACAACTTCACGCAGGACGAGCTGCAGCAAATAGGGCTCGGGTACGACCGCATGGTCCGGTTCATGGAGAAAGACGACCCGAATTTGCGCCACCCGAACGATTGGTACAAGTACGGCGAGTTCGGGCCCTACTCGTGGAAAGGAGTCGTCGTCGGCGACCCGGTTCGGGGGCGGTTCACTGACGAAAGAGTGACGATAATGAGTTCAGTTAGGGATGAGGAAGAGTGGGATAAGATAGAGCAATTTGAGATGAGTCAAGATTTTGGGAAGAGACTGACTCAATTGGATAAGAAGATTGGGCATAGGTACTATTGGGTGTTTGTGAGGCACCCGAAATGGAGGGTTTCGGAACTGCCGTGGGAGCAGTGGACTTTGGTTAGTGAGCTGGTGGTGGAAGCTGAGAAGAACAAGAGGTTGGATAAGTGGAGCTTGATGGGTAGGCTTGGGAATTTGACTAGGTCTTTGATAACTAAATGTGCAGCGTGGATGAGGCCGGATATTTTGTATGTCAAGAGGCCGGTGTTTCAGTGCCGGTTTGAGCCTCAGGATGATTTCTTCAATGCTTTGGTGCCGTTTTTGGATCCAAAGACGGAGCAGGATTACATGTTTCAGTTGGAGAGAGAGGATGGGAGTGGTGAGATGTGTACTTATTATGGGGGGTTGTGTAAGATTGTGAAGGTGAATCAGAAGGCGTATGTGGATGATGTGGTTAAGGCTTATGAGAAGTTGAGTGATCAGGAGAAGTCTAGGTGTTTGGGGTTTTTGCTGGAGAATCATCCTGTTAAGTTGTTGCATCCGTATACGAAAGAGTGGAAGGCTAAGTTGGAGGAGTGGGAGTTGGGTTGTGATGCTCCGGATAGTGATGATGCTGACCTCCCTATCAATGCGGCAGAGAAGGAGTTTACGGATTGGGTTGAGGTTGATGATGAGGATGGCATTGGGGGTGAGGATGAGGATGAGGATGACAGTGACGGTGACAGTGGTGAGGAAAGTGATGTTGTTATAGATATGGAAAAGGGTGAAGATGATATCTTGGGTGTCCAGGACGAGGATTTGAGTGAAGAAGAGGATGAGAAGTATTGGGAGGATGAGTTTAGAAAGGCCGCGACTAGTGCTGAAGCAATGGAAAAGCTAGCAAAACGGAGTGTAGAGATAACTGATAAGTTTTACAATAAACAGTTGAGGGGAATGGAAGGAAATAAAAGTGGGAACTCGGTAGATGATGGTGATGAAACTGCCATGAGGGGAAGAAGACCGAAAATAAGTGAAGAAGAATGGAAGCTTGCTGGGTATGGTCCATGGAAGAAAAGAATTAAGAAGAGTAGAATTCCTCCACAGTTGTTCTTGCGAGCAGCAGTTAACTTCTATACTTACAGAAACCTTGTGAAGGAGATTGTTTTGACTAGGCATGCAATTCTGGATGGTGATTTTCCTCATAAGGCTTCAAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

610

Amino Acids

70.63

Weight (kDa)

5.55

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14900
fragaria_vesca FvH4_3g18290
malus_domestica MD03G1243600.v1.1
prunus_persica Prupe.4G164700_v2.0.a1
pyrus_communis pycom03g19030
rosa_chinensis RchiOBHm_Chr5g0030921
rosa_laevigata RLG00000033272
rosa_multiflora Rmu_sc0001974.1_g000013
rosa_roxburghii Rroxscaffold_1G00049340
rosa_rugosa Rorug05G0121500
rosa_samantha Rh5AG214700 Rh5BG213600 Rh5CG237500 Rh5DG218100
rosa_wichuraiana Rw5G019630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 428
Acc36I ACCTGC 1 cut(s) 198
AccB1I GGYRCC 2 cut(s) 702, 943
AccI GTMKAC 1 cut(s) 1175
AccII CGCG 3 cut(s) 195, 197, 1481
AccIII TCCGGA 1 cut(s) 1228
AciI CCGC 7 cut(s) 70, 172, 290, 424, 547, 1262, 1479
AclWI GGATC 2 cut(s) 950, 963
AcoI YGGCCR 2 cut(s) 205, 256
AcsI RAATTY 5 cut(s) 144, 177, 457, 823, 1701
AcuI CTGAAG 1 cut(s) 1512
AfaI GTAC 5 cut(s) 419, 482, 488, 683, 1021
AfiI CCNNNNNNNGG 6 cut(s) 439, 510, 541, 542, 1423, 1762
AflIII ACRYGT 1 cut(s) 978
AgsI TTSAA 3 cut(s) 88, 934, 1821
AhlI ACTAGT 1 cut(s) 1484
AjnI CCWGG 1 cut(s) 1416
AjuI GAANNNNNNNTTGG 4 cut(s) 773, 805, 1181, 1213
AluBI AGCT 7 cut(s) 325, 397, 760, 773, 804, 1507, 1657
AluI AGCT 7 cut(s) 325, 397, 760, 773, 804, 1507, 1657
Alw26I GTCTC 3 cut(s) 133, 246, 640
AlwI GGATC 2 cut(s) 950, 963
Ama87I CYCGRG 1 cut(s) 413
Aor13HI TCCGGA 1 cut(s) 1228
AoxI GGCC 8 cut(s) 151, 205, 222, 256, 500, 866, 890, 1476
ApaI GGGCCC 1 cut(s) 504
ApeKI GCWGC 4 cut(s) 397, 400, 854, 1727
ApoI RAATTY 5 cut(s) 144, 177, 457, 823, 1701
ArsI GACNNNNNNTTYG 2 cut(s) 820, 852
AspLEI GCGC 3 cut(s) 195, 197, 465
AspS9I GGNCC 7 cut(s) 4, 152, 187, 430, 500, 501, 1670
AsuC2I CCSGG 2 cut(s) 374, 536
AsuHPI GGTGA 9 cut(s) 353, 1022, 1066, 1331, 1361, 1370, 1406, 1613, 1811
AsuNHI GCTAGC 1 cut(s) 1507
AvaI CYCGRG 1 cut(s) 413
AvaII GGWCC 4 cut(s) 4, 187, 430, 1670
AxyI CCTNAGG 1 cut(s) 918
BaeGI GKGCMC 1 cut(s) 504
BamHI GGATCC 1 cut(s) 955
BanI GGYRCC 2 cut(s) 702, 943
BanII GRGCYC 2 cut(s) 414, 504
BauI CACGAG 1 cut(s) 508
BbsI GAAGAC 1 cut(s) 1633
BbvI GCAGC 4 cut(s) 384, 412, 866, 1739
BccI CCATC 6 cut(s) 125, 802, 995, 1301, 1592, 1790
BceAI ACGGC 5 cut(s) 110, 271, 505, 715, 931
BcgI CGANNNNNNTGC 2 cut(s) 172, 206
BciT130I CCWGG 1 cut(s) 1418
BclI TGATCA 1 cut(s) 1108
BcnI CCSGG 2 cut(s) 374, 536
BcoDI GTCTC 3 cut(s) 133, 246, 640
BcuI ACTAGT 1 cut(s) 1484
BfaI CTAG 5 cut(s) 831, 1122, 1485, 1508, 1779
BfmI CTRYAG 1 cut(s) 398
BfuAI ACCTGC 1 cut(s) 198
BisI GCNGC 7 cut(s) 291, 398, 401, 855, 1263, 1479, 1728
BlsI GCNGC 7 cut(s) 292, 399, 402, 856, 1264, 1480, 1729
Bme1390I CCNGG 3 cut(s) 374, 536, 1418
Bme18I GGWCC 4 cut(s) 4, 187, 430, 1670
BmeT110I CYCGRG 1 cut(s) 413
BmgT120I GGNCC 7 cut(s) 4, 152, 187, 430, 500, 501, 1670
BmiI GGNNCC 8 cut(s) 6, 154, 188, 244, 502, 704, 945, 957
BmrFI CCNGG 3 cut(s) 374, 536, 1418
BmsI GCATC 4 cut(s) 256, 1177, 1213, 1231
BmtI GCTAGC 1 cut(s) 1511
BpiI GAAGAC 1 cut(s) 1633
BplI GAGNNNNNCTC 4 cut(s) 289, 321, 637, 669
BpmI CTGGAG 1 cut(s) 1163
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 2 cut(s) 374, 536
Bsa29I ATCGAT 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 182, 731, 1673
BsaWI WCCGGW 4 cut(s) 248, 363, 432, 1228
BsaXI ACNNNNNCTCC 6 cut(s) 510, 540, 1196, 1226, 1451, 1481
Bsc4I CCNNNNNNNGG 6 cut(s) 439, 510, 541, 542, 1423, 1762
Bse118I RCCGGY 4 cut(s) 203, 345, 892, 906
Bse21I CCTNAGG 1 cut(s) 918
Bse3DI GCAATG 1 cut(s) 1503
BseAI TCCGGA 1 cut(s) 1228
BseBI CCWGG 1 cut(s) 1418
BseCI ATCGAT 1 cut(s) 264
BseDI CCNNGG 3 cut(s) 182, 731, 1673
BseLI CCNNNNNNNGG 6 cut(s) 439, 510, 541, 542, 1423, 1762
BseMI GCAATG 1 cut(s) 1503
BseMII CTCAG 3 cut(s) 28, 765, 932
BsePI GCGCGC 1 cut(s) 193
BseRI GAGGAG 3 cut(s) 35, 243, 1217
BseSI GKGCMC 1 cut(s) 504
BseX3I CGGCCG 2 cut(s) 205, 256
BseXI GCAGC 4 cut(s) 384, 412, 866, 1739
BseYI CCCAGC 1 cut(s) 1661
BsgI GTGCAG 1 cut(s) 873
Bsh1236I CGCG 3 cut(s) 195, 197, 1481
Bsh1285I CGRYCG 3 cut(s) 208, 259, 424
BshFI GGCC 8 cut(s) 153, 207, 224, 258, 502, 868, 892, 1478
BshNI GGYRCC 2 cut(s) 702, 943
BshVI ATCGAT 1 cut(s) 264
BsiEI CGRYCG 3 cut(s) 208, 259, 424
BsiHKCI CYCGRG 1 cut(s) 413
BslFI GGGAC 1 cut(s) 200
BslI CCNNNNNNNGG 6 cut(s) 439, 510, 541, 542, 1423, 1762
BsmAI GTCTC 3 cut(s) 133, 246, 640
BsmBI CGTCTC 2 cut(s) 133, 246
BsmFI GGGAC 1 cut(s) 200
BsnI GGCC 8 cut(s) 153, 207, 224, 258, 502, 868, 892, 1478
BsoBI CYCGRG 1 cut(s) 413
Bsp120I GGGCCC 1 cut(s) 500
Bsp1286I GDGCHC 2 cut(s) 414, 504
Bsp13I TCCGGA 1 cut(s) 1228
Bsp143I GATC 2 cut(s) 955, 1108
Bsp19I CCATGG 1 cut(s) 1673
BspACI CCGC 7 cut(s) 70, 172, 290, 424, 547, 1262, 1479
BspANI GGCC 8 cut(s) 153, 207, 224, 258, 502, 868, 892, 1478
BspCNI CTCAG 3 cut(s) 27, 766, 931
BspDI ATCGAT 1 cut(s) 264
BspEI TCCGGA 1 cut(s) 1228
BspFNI CGCG 3 cut(s) 195, 197, 1481
BspLI GGNNCC 8 cut(s) 6, 154, 188, 244, 502, 704, 945, 957
BspMAI CTGCAG 1 cut(s) 402
BspMI ACCTGC 1 cut(s) 198
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 2 cut(s) 950, 963
BspT107I GGYRCC 2 cut(s) 702, 943
BsrDI GCAATG 1 cut(s) 1503
BsrFI RCCGGY 4 cut(s) 203, 345, 892, 906
BssAI RCCGGY 4 cut(s) 203, 345, 892, 906
BssECI CCNNGG 3 cut(s) 182, 731, 1673
BssHII GCGCGC 1 cut(s) 193
BssMI GATC 2 cut(s) 955, 1108
BssNAI GTATAC 1 cut(s) 1176
BssSI CACGAG 1 cut(s) 508
BssT1I CCWWGG 1 cut(s) 1673
Bst1107I GTATAC 1 cut(s) 1176
Bst2BI CACGAG 1 cut(s) 508
Bst2UI CCWGG 1 cut(s) 1418
Bst4CI ACNGT 5 cut(s) 1343, 1349, 1355, 1554, 1713
Bst6I CTCTTC 5 cut(s) 290, 591, 638, 1434, 1688
BstC8I GCNNGC 8 cut(s) 195, 205, 307, 327, 1509, 1659, 1725, 1785
BstDEI CTNAG 4 cut(s) 14, 774, 918, 1194
BstDSI CCRYGG 2 cut(s) 731, 1673
BstENI CCTNNNNNAGG 1 cut(s) 1760
BstFNI CGCG 3 cut(s) 195, 197, 1481
BstHHI GCGC 3 cut(s) 195, 197, 465
BstKTI GATC 2 cut(s) 958, 1111
BstMAI GTCTC 3 cut(s) 133, 246, 640
BstMBI GATC 2 cut(s) 955, 1108
BstMCI CGRYCG 3 cut(s) 208, 259, 424
BstMWI GCNNNNNNNGC 4 cut(s) 394, 409, 736, 1487
BstNI CCWGG 1 cut(s) 1418
BstNSI RCATGY 2 cut(s) 982, 1787
BstSCI CCNGG 3 cut(s) 372, 534, 1416
BstSFI CTRYAG 1 cut(s) 398
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 3 cut(s) 195, 197, 1481
BstV1I GCAGC 4 cut(s) 384, 412, 866, 1739
BstV2I GAAGAC 1 cut(s) 1633
BstX2I RGATCY 1 cut(s) 955
BstYI RGATCY 1 cut(s) 955
BstZ17I GTATAC 1 cut(s) 1176
BstZI CGGCCG 2 cut(s) 205, 256
Bsu15I ATCGAT 1 cut(s) 264
Bsu36I CCTNAGG 1 cut(s) 918
BsuRI GGCC 8 cut(s) 153, 207, 224, 258, 502, 868, 892, 1478
BsuTUI ATCGAT 1 cut(s) 264
BtgI CCRYGG 2 cut(s) 731, 1673
BtsI GCAGTG 1 cut(s) 746
BtsIMutI CAGTG 5 cut(s) 552, 746, 908, 1348, 1360
BveI ACCTGC 1 cut(s) 198
Cac8I GCNNGC 8 cut(s) 195, 205, 307, 327, 1509, 1659, 1725, 1785
CfoI GCGC 3 cut(s) 195, 197, 465
Cfr10I RCCGGY 4 cut(s) 203, 345, 892, 906
Cfr13I GGNCC 7 cut(s) 4, 152, 187, 430, 500, 501, 1670
ClaI ATCGAT 1 cut(s) 264
Csp6I GTAC 5 cut(s) 418, 481, 487, 682, 1020
CviAII CATG 6 cut(s) 427, 439, 979, 1615, 1674, 1784
CviQI GTAC 5 cut(s) 418, 481, 487, 682, 1020
DdeI CTNAG 4 cut(s) 14, 774, 918, 1194
DpnI GATC 2 cut(s) 957, 1110
DpnII GATC 2 cut(s) 955, 1108
DrdI GACNNNNNNGTC 1 cut(s) 428
DseDI GACNNNNNNGTC 1 cut(s) 428
EaeI YGGCCR 2 cut(s) 205, 256
EagI CGGCCG 2 cut(s) 205, 256
Eam1104I CTCTTC 5 cut(s) 290, 591, 638, 1434, 1688
EarI CTCTTC 5 cut(s) 290, 591, 638, 1434, 1688
EciI GGCGGA 1 cut(s) 59
EclXI CGGCCG 2 cut(s) 205, 256
Eco130I CCWWGG 1 cut(s) 1673
Eco24I GRGCYC 2 cut(s) 414, 504
Eco32I GATATC 1 cut(s) 1405
Eco47I GGWCC 4 cut(s) 4, 187, 430, 1670
Eco52I CGGCCG 2 cut(s) 205, 256
Eco57I CTGAAG 1 cut(s) 1512
Eco81I CCTNAGG 1 cut(s) 918
Eco88I CYCGRG 1 cut(s) 413
EcoNI CCTNNNNNAGG 1 cut(s) 1760
EcoO109I RGGNCCY 2 cut(s) 187, 501
EcoRI GAATTC 1 cut(s) 1701
EcoRII CCWGG 1 cut(s) 1416
EcoRV GATATC 1 cut(s) 1405
EcoT14I CCWWGG 1 cut(s) 1673
EcoT38I GRGCYC 2 cut(s) 414, 504
ErhI CCWWGG 1 cut(s) 1673
Esp3I CGTCTC 2 cut(s) 133, 246
FaeI CATG 6 cut(s) 430, 442, 982, 1618, 1677, 1787
FalI AAGNNNNNCTT 2 cut(s) 788, 820
FaqI GGGAC 1 cut(s) 200
FatI CATG 6 cut(s) 426, 438, 978, 1614, 1673, 1783
FauI CCCGC 1 cut(s) 179
FbaI TGATCA 1 cut(s) 1108
FblI GTMKAC 1 cut(s) 1175
Fnu4HI GCNGC 7 cut(s) 291, 398, 401, 855, 1263, 1479, 1728
FriOI GRGCYC 2 cut(s) 414, 504
Fsp4HI GCNGC 7 cut(s) 291, 398, 401, 855, 1263, 1479, 1728
FspBI CTAG 5 cut(s) 831, 1122, 1485, 1508, 1779
GlaI GCGC 3 cut(s) 194, 196, 464
GluI GCNGC 7 cut(s) 291, 398, 401, 855, 1263, 1479, 1728
GsaI CCCAGC 1 cut(s) 1665
GsuI CTGGAG 1 cut(s) 1163
HaeIII GGCC 8 cut(s) 153, 207, 224, 258, 502, 868, 892, 1478
HhaI GCGC 3 cut(s) 195, 197, 465
Hin1II CATG 6 cut(s) 430, 442, 982, 1618, 1677, 1787
Hin6I GCGC 3 cut(s) 193, 195, 463
HinP1I GCGC 3 cut(s) 193, 195, 463
HincII GTYRAC 1 cut(s) 1735
HindII GTYRAC 1 cut(s) 1735
HindIII AAGCTT 1 cut(s) 1655
HinfI GANTC 7 cut(s) 261, 332, 519, 628, 652, 1057, 1147
HpaI GTTAAC 1 cut(s) 1735
HphI GGTGA 9 cut(s) 353, 1022, 1066, 1331, 1361, 1370, 1406, 1613, 1811
Hpy166II GTNNAC 6 cut(s) 552, 744, 1020, 1176, 1278, 1735
Hpy188I TCNGA 6 cut(s) 60, 122, 183, 277, 724, 1062
Hpy188III TCNNGA 7 cut(s) 352, 632, 886, 920, 1112, 1229, 1793
Hpy8I GTNNAC 6 cut(s) 552, 744, 1020, 1176, 1278, 1735
Hpy99I CGWCG 2 cut(s) 527, 530
HpyCH4III ACNGT 5 cut(s) 1343, 1349, 1355, 1554, 1713
HpyCH4V TGCA 4 cut(s) 400, 854, 1168, 1787
HpyF10VI GCNNNNNNNGC 4 cut(s) 394, 409, 736, 1487
HpyF3I CTNAG 4 cut(s) 14, 774, 918, 1194
Hsp92II CATG 6 cut(s) 430, 442, 982, 1618, 1677, 1787
HspAI GCGC 3 cut(s) 193, 195, 463
Kpn2I TCCGGA 1 cut(s) 1228
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 1108
KspAI GTTAAC 1 cut(s) 1735
Kzo9I GATC 2 cut(s) 955, 1108
LmnI GCTCC 6 cut(s) 210, 248, 736, 801, 967, 1231
Lsp1109I GCAGC 4 cut(s) 384, 412, 866, 1739
LweI GCATC 4 cut(s) 256, 1177, 1213, 1231
MaeI CTAG 5 cut(s) 831, 1122, 1485, 1508, 1779
MaeIII GTNAC 3 cut(s) 565, 1343, 1349
MalI GATC 2 cut(s) 957, 1110
MboI GATC 2 cut(s) 955, 1108
MfeI CAATTG 1 cut(s) 656
MflI RGATCY 1 cut(s) 955
MhlI GDGCHC 2 cut(s) 414, 504
MlyI GAGTC 4 cut(s) 341, 528, 637, 646
MmeI TCCRAC 3 cut(s) 771, 969, 1179
MroI TCCGGA 1 cut(s) 1228
MroNI GCCGGC 1 cut(s) 203
MseI TTAA 4 cut(s) 1086, 1158, 1689, 1734
MspR9I CCNGG 3 cut(s) 374, 536, 1418
MunI CAATTG 1 cut(s) 656
MvaI CCWGG 1 cut(s) 1418
MvnI CGCG 3 cut(s) 195, 197, 1481
MwoI GCNNNNNNNGC 4 cut(s) 394, 409, 736, 1487
NaeI GCCGGC 1 cut(s) 205
NciI CCSGG 2 cut(s) 374, 536
NcoI CCATGG 1 cut(s) 1673
NdeII GATC 2 cut(s) 955, 1108
NgoMIV GCCGGC 1 cut(s) 203
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 6 cut(s) 430, 442, 982, 1618, 1677, 1787
NlaIV GGNNCC 8 cut(s) 6, 154, 188, 244, 502, 704, 945, 957
NmeAIII GCCGAG 1 cut(s) 355
NmuCI GTSAC 3 cut(s) 565, 1343, 1349
NspI RCATGY 2 cut(s) 982, 1787
PaeI GCATGC 1 cut(s) 1787
PauI GCGCGC 1 cut(s) 193
PciI ACATGT 1 cut(s) 978
PcsI WCGNNNNNNNCGW 3 cut(s) 261, 528, 728
PdiI GCCGGC 1 cut(s) 205
PfeI GAWTC 3 cut(s) 261, 1057, 1147
PflFI GACNNNGTC 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 1416
PkrI GCNGC 7 cut(s) 292, 399, 402, 856, 1264, 1480, 1729
PleI GAGTC 4 cut(s) 340, 527, 636, 646
PpsI GAGTC 4 cut(s) 340, 527, 636, 646
PpuMI RGGWCCY 1 cut(s) 187
PscI ACATGT 1 cut(s) 978
Psp5II RGGWCCY 1 cut(s) 187
Psp6I CCWGG 1 cut(s) 1416
PspFI CCCAGC 1 cut(s) 1661
PspGI CCWGG 1 cut(s) 1416
PspN4I GGNNCC 8 cut(s) 6, 154, 188, 244, 502, 704, 945, 957
PspOMI GGGCCC 1 cut(s) 500
PspPI GGNCC 7 cut(s) 4, 152, 187, 430, 500, 501, 1670
PspPPI RGGWCCY 1 cut(s) 187
PsrI GAACNNNNNNTAC 4 cut(s) 464, 479, 496, 511
PstI CTGCAG 1 cut(s) 402
PsuI RGATCY 1 cut(s) 955
PsyI GACNNNGTC 1 cut(s) 832
PteI GCGCGC 1 cut(s) 193
RsaI GTAC 5 cut(s) 419, 482, 488, 683, 1021
RsaNI GTAC 5 cut(s) 418, 481, 487, 682, 1020
SaqAI TTAA 4 cut(s) 1086, 1158, 1689, 1734
SatI GCNGC 7 cut(s) 291, 398, 401, 855, 1263, 1479, 1728
Sau3AI GATC 2 cut(s) 955, 1108
Sau96I GGNCC 7 cut(s) 4, 152, 187, 430, 500, 501, 1670
SchI GAGTC 4 cut(s) 341, 528, 637, 646
ScrFI CCNGG 3 cut(s) 374, 536, 1418
SduI GDGCHC 2 cut(s) 414, 504
SfaNI GCATC 4 cut(s) 256, 1177, 1213, 1231
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 4 cut(s) 4, 187, 430, 1670
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
SpeI ACTAGT 1 cut(s) 1484
SphI GCATGC 1 cut(s) 1787
SsiI CCGC 7 cut(s) 70, 172, 290, 424, 547, 1262, 1479
SspMI CTAG 5 cut(s) 831, 1122, 1485, 1508, 1779
StyD4I CCNGG 3 cut(s) 372, 534, 1416
StyI CCWWGG 1 cut(s) 1673
TaaI ACNGT 5 cut(s) 1343, 1349, 1355, 1554, 1713
TaqI TCGA 2 cut(s) 264, 335
TaqII GACCGA 1 cut(s) 1645
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 3 cut(s) 293, 1265, 1481
TfiI GAWTC 3 cut(s) 261, 1057, 1147
Tru1I TTAA 4 cut(s) 1086, 1158, 1689, 1734
Tru9I TTAA 4 cut(s) 1086, 1158, 1689, 1734
TscAI CASTG 5 cut(s) 559, 746, 908, 1348, 1360
TseFI GTSAC 3 cut(s) 565, 1343, 1349
TseI GCWGC 4 cut(s) 397, 400, 854, 1727
Tsp45I GTSAC 3 cut(s) 565, 1343, 1349
TspDTI ATGAA 2 cut(s) 427, 1620
TspGWI ACGGA 4 cut(s) 980, 1161, 1295, 1531
TspRI CASTG 5 cut(s) 559, 746, 908, 1348, 1360
Tth111I GACNNNGTC 1 cut(s) 832
VpaK11BI GGWCC 4 cut(s) 4, 187, 430, 1670
XagI CCTNNNNNAGG 1 cut(s) 1760
XapI RAATTY 5 cut(s) 144, 177, 457, 823, 1701
XceI RCATGY 2 cut(s) 982, 1787
XmiI GTMKAC 1 cut(s) 1175
XspI CTAG 5 cut(s) 831, 1122, 1485, 1508, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.