MD03G1243600.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0016004
Physical Location & Seq
Forward (+)
32789137 .. 32790957
1821 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1243600.v1.1.491

Sequence Viewer

Length: 1821 bp
ATGCTGAGTCAAGACCCCTCTCTCTCTAAAACCCTAAACCCCTCTCTCTTCCTCCTCACGCCATTCTCCAATCCTCTCCGCAAAACCCTAACCCTAAAGCCCCTCACCGTGGCCCCCAAAACCCTCTCCATTAACTCATCCTCCCAATTCCCGCTAAATTCCGACCCCAATTTCACATTTTCCCGCCAAATTCCCCATCTACGGCGGGACCTCCGCTTGTTCGCCGGCCGGAGCAAGAAGAAGGCCGGAGGCGGACCGTCCCCGGGCCGAATCGAGGGTAACGCGGATTCTCGCCGGGAGGTGAGGGAAAATGCTCGCAGGAAAAGCAAAAGGCTCGCCGAGTCCAATTTCTATAGGCTCAAGAACCAGAGCCGGAAGTACGCCGATAACTTCACCGAGGACGAGCTCCAGCAAATCGGGCTCGGGTATGACCGGATGGTCCGGTTCATGGAGAAGGACGACCCCAATTTGCGCCACCCGCATGACTGGTACAAGTACGGAGAATTCGGGCCGTATTCCTGGCGCGGGGTAGTCGTCGGCCAACCGGTCCGCGGAAGGTTTACCGACGAGAGGGTGACGATTATTGGGGAAGTAAAGGACCAGGAGGAGTGGGAAAAGATTGAGCAATTTGAGATGAGCCAAGATTTTGGGAAGAGATTGGGGCAATTGGATAGAAGCAAAGGGAGGAAGTACTTTTGGGTGTTTGTGAGGCACCCGAGGTGGCGGCTTTCGGATTTTCCGTGGCAGCAGTGGACTTTGGTGTGTGAGGTGGTGGTGGAAGGCGAAAAGCAGAGGCTGGACAAATGGAGTTTGATGGGCAGGCTTGGGAATTTGACTAGATCTTTGATAACAAAGTGTGCAGCTTGGTTTAGACCCGATATTATATACGTGAAGAGGCCAGTTTATCAGTGCAGGTTCGAGCCTCAGGACGATTTTTTCAAGGTGTTGACCCCGTTTCTTGATCCAAAAACGGAGGAGGATTACTTGTTTGAGCTCGAGAAAGCTGATGGGAGTGTTGAAATGTGCACTTACTTTGGTGGGTTGTGTAAGATTGTGAAGGTGAATCAGAAGGCGTTTGTGGATGATGTGGTGAAGGGTTATGAGAAGTTGAGTGATGAGGAGAAGTCAAGGTGTTTGGGGTTTTTGCTAAAGAATCATCCGGTTCAGTTGTTGCATCCGTATACGAAGGAGTGGAAGGCCAAGTTGGAGGAGTGGGAGTTGGGTTGTGATGCGCCGGATGGTGATGATGAGGGCAGCGGCATCAATGTGGCCGAGAAGGAGTTTACGGAGTGGGTTGAGGATGACGAGGTTGATAATGAGGAGGATAATGTTGTTATGGAAATGGAAGATGGTGGTGAGAGTGAATTTGAGGTTGATGATGAGGAGGAAGGTGATGGAGACGATGAATTGGGAGTTGACGCGGAAGAGTTGAGTGAAGAAGAGGATGAGAAGTACTGGGAGGAGGAGTTTGAAAAGGCGGTGAGTAGCTCGGATGCAATGGAAAAGCTAGCAAAACAGAGTGTAGAGGCAACTACGGAGTACTATAAGAAGCAATTGAGGACAATGGAAGGGAACAAAAATCGAAACTTGGAGGACGACGAAGATGGTGATGGTGATGAAATCGTCATGAGGGGGAAACGACCGACAGTGAGTGCTGAAGAATGGAAGGTTGCTGGGTATGGTCCATGGAGGAAAAGGATCAAGAAGAGTAAGATTCCTCCGCAACTGTTTTTGCGAGCAGCGGTTCGACCCTTCACTTACAGAAATCTTGTGAAGGAGATAGTTTTGACTAGGCATGGAATTGTGGATGGAGATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

607

Amino Acids

70.56

Weight (kDa)

5.12

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14900
fragaria_vesca FvH4_3g18290
malus_domestica MD03G1243600.v1.1
prunus_persica Prupe.4G164700_v2.0.a1
pyrus_communis pycom03g19030
rosa_chinensis RchiOBHm_Chr5g0030921
rosa_laevigata RLG00000033272
rosa_multiflora Rmu_sc0001974.1_g000013
rosa_roxburghii Rroxscaffold_1G00049340
rosa_rugosa Rorug05G0121500
rosa_samantha Rh5AG214700 Rh5BG213600 Rh5CG237500 Rh5DG218100
rosa_wichuraiana Rw5G019630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 437
Acc36I ACCTGC 1 cut(s) 903
AccB1I GGYRCC 1 cut(s) 711
AccI GTMKAC 1 cut(s) 1181
AccII CGCG 4 cut(s) 284, 525, 552, 1421
AclWI GGATC 2 cut(s) 956, 1706
AcoI YGGCCR 3 cut(s) 226, 538, 1269
AcsI RAATTY 5 cut(s) 157, 189, 503, 829, 1364
AcuI CTGAAG 1 cut(s) 1677
AfaI GTAC 6 cut(s) 380, 491, 497, 692, 1454, 1541
AfiI CCNNNNNNNGG 8 cut(s) 109, 201, 263, 274, 448, 525, 551, 570
AgeI ACCGGT 1 cut(s) 544
AgsI TTSAA 3 cut(s) 940, 1019, 1472
AjnI CCWGG 2 cut(s) 518, 600
AjuI GAANNNNNNNTTGG 2 cut(s) 1187, 1219
AluBI AGCT 6 cut(s) 406, 863, 994, 1004, 1488, 1507
AluI AGCT 6 cut(s) 406, 863, 994, 1004, 1488, 1507
Alw21I GWGCWC 3 cut(s) 408, 996, 1028
Alw26I GTCTC 1 cut(s) 1392
Alw44I GTGCAC 1 cut(s) 1024
AlwI GGATC 2 cut(s) 956, 1706
AlwNI CAGNNNCTG 1 cut(s) 796
Ama87I CYCGRG 4 cut(s) 262, 422, 715, 995
AoxI GGCC 9 cut(s) 111, 226, 243, 265, 509, 538, 896, 1197, 1269
ApaLI GTGCAC 1 cut(s) 1024
ApeKI GCWGC 4 cut(s) 745, 860, 1254, 1739
ApoI RAATTY 5 cut(s) 157, 189, 503, 829, 1364
ArsI GACNNNNNNTTYG 2 cut(s) 826, 858
AsiGI ACCGGT 1 cut(s) 544
AspLEI GCGC 3 cut(s) 474, 525, 1234
AspS9I GGNCC 9 cut(s) 112, 208, 254, 265, 439, 509, 547, 598, 1682
AsuC2I CCSGG 3 cut(s) 263, 264, 296
AsuNHI GCTAGC 1 cut(s) 1507
AvaI CYCGRG 4 cut(s) 262, 422, 715, 995
AvaII GGWCC 6 cut(s) 208, 254, 439, 547, 598, 1682
AxyI CCTNAGG 1 cut(s) 924
BaeGI GKGCMC 1 cut(s) 1028
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 3 cut(s) 408, 423, 996
Bbv12I GWGCWC 3 cut(s) 408, 996, 1028
BbvI GCAGC 4 cut(s) 757, 872, 1266, 1751
BceAI ACGGC 2 cut(s) 218, 496
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 2 cut(s) 520, 602
BcnI CCSGG 3 cut(s) 263, 264, 296
BcoDI GTCTC 1 cut(s) 1392
BfaI CTAG 3 cut(s) 837, 1508, 1791
BfmI CTRYAG 1 cut(s) 352
BfuAI ACCTGC 1 cut(s) 903
BglII AGATCT 1 cut(s) 839
BisI GCNGC 6 cut(s) 725, 746, 861, 1255, 1258, 1740
BlsI GCNGC 6 cut(s) 726, 747, 862, 1256, 1259, 1741
BmcAI AGTACT 3 cut(s) 692, 1454, 1541
Bme1390I CCNGG 5 cut(s) 263, 264, 296, 520, 602
Bme18I GGWCC 6 cut(s) 208, 254, 439, 547, 598, 1682
BmeT110I CYCGRG 4 cut(s) 262, 422, 715, 995
BmgT120I GGNCC 9 cut(s) 112, 208, 254, 265, 439, 509, 547, 598, 1682
BmiI GGNNCC 3 cut(s) 114, 209, 713
BmrFI CCNGG 5 cut(s) 263, 264, 296, 520, 602
BmrI ACTGGG 1 cut(s) 1465
BmsI GCATC 4 cut(s) 1183, 1219, 1269, 1483
BmtI GCTAGC 1 cut(s) 1511
BmuI ACTGGG 1 cut(s) 1465
BpmI CTGGAG 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 344
BpuMI CCSGG 3 cut(s) 263, 264, 296
BsaAI YACGTR 1 cut(s) 889
BsaJI CCNNGG 8 cut(s) 108, 261, 262, 396, 550, 716, 740, 1685
BsaWI WCCGGW 4 cut(s) 432, 441, 544, 1159
BsaXI ACNNNNNCTCC 6 cut(s) 125, 155, 1202, 1232, 1451, 1481
Bsc4I CCNNNNNNNGG 8 cut(s) 109, 201, 263, 274, 448, 525, 551, 570
Bse118I RCCGGY 2 cut(s) 224, 544
Bse1I ACTGG 3 cut(s) 491, 899, 1460
Bse21I CCTNAGG 1 cut(s) 924
Bse3DI GCAATG 1 cut(s) 1503
BseBI CCWGG 2 cut(s) 520, 602
BseDI CCNNGG 8 cut(s) 108, 261, 262, 396, 550, 716, 740, 1685
BseLI CCNNNNNNNGG 8 cut(s) 109, 201, 263, 274, 448, 525, 551, 570
BseMI GCAATG 1 cut(s) 1503
BseMII CTCAG 1 cut(s) 938
BseNI ACTGG 3 cut(s) 491, 899, 1460
BseRI GAGGAG 9 cut(s) 44, 620, 989, 1133, 1223, 1334, 1397, 1475, 1478
BseSI GKGCMC 1 cut(s) 1028
BseX3I CGGCCG 1 cut(s) 226
BseXI GCAGC 4 cut(s) 757, 872, 1266, 1751
BseYI CCCAGC 1 cut(s) 1673
BsgI GTGCAG 2 cut(s) 879, 931
Bsh1236I CGCG 4 cut(s) 284, 525, 552, 1421
Bsh1285I CGRYCG 2 cut(s) 229, 1643
BshFI GGCC 9 cut(s) 113, 228, 245, 267, 511, 540, 898, 1199, 1271
BshNI GGYRCC 1 cut(s) 711
BshTI ACCGGT 1 cut(s) 544
BsiEI CGRYCG 2 cut(s) 229, 1643
BsiHKAI GWGCWC 3 cut(s) 408, 996, 1028
BsiHKCI CYCGRG 4 cut(s) 262, 422, 715, 995
BslFI GGGAC 2 cut(s) 221, 244
BslI CCNNNNNNNGG 8 cut(s) 109, 201, 263, 274, 448, 525, 551, 570
BsmAI GTCTC 1 cut(s) 1392
BsmBI CGTCTC 1 cut(s) 1392
BsmFI GGGAC 2 cut(s) 221, 244
BsnI GGCC 9 cut(s) 113, 228, 245, 267, 511, 540, 898, 1199, 1271
BsoBI CYCGRG 4 cut(s) 262, 422, 715, 995
Bsp1286I GDGCHC 4 cut(s) 408, 423, 996, 1028
Bsp143I GATC 3 cut(s) 839, 961, 1698
Bsp19I CCATGG 1 cut(s) 1685
BspANI GGCC 9 cut(s) 113, 228, 245, 267, 511, 540, 898, 1199, 1271
BspCNI CTCAG 1 cut(s) 937
BspFNI CGCG 4 cut(s) 284, 525, 552, 1421
BspHI TCATGA 1 cut(s) 1626
BspLI GGNNCC 3 cut(s) 114, 209, 713
BspMI ACCTGC 1 cut(s) 903
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 2 cut(s) 956, 1706
BspT107I GGYRCC 1 cut(s) 711
BsrDI GCAATG 1 cut(s) 1503
BsrFI RCCGGY 2 cut(s) 224, 544
BsrI ACTGG 3 cut(s) 491, 899, 1460
BssAI RCCGGY 2 cut(s) 224, 544
BssECI CCNNGG 8 cut(s) 108, 261, 262, 396, 550, 716, 740, 1685
BssMI GATC 3 cut(s) 839, 961, 1698
BssNAI GTATAC 1 cut(s) 1182
BssT1I CCWWGG 1 cut(s) 1685
Bst1107I GTATAC 1 cut(s) 1182
Bst2UI CCWGG 2 cut(s) 520, 602
Bst4CI ACNGT 4 cut(s) 109, 258, 1648, 1728
Bst6I CTCTTC 6 cut(s) 53, 647, 887, 1419, 1434, 1700
BstBAI YACGTR 1 cut(s) 889
BstC8I GCNNGC 6 cut(s) 226, 316, 336, 821, 1509, 1737
BstDEI CTNAG 2 cut(s) 5, 924
BstDSI CCRYGG 4 cut(s) 108, 550, 740, 1685
BstFNI CGCG 4 cut(s) 284, 525, 552, 1421
BstHHI GCGC 3 cut(s) 474, 525, 1234
BstKTI GATC 3 cut(s) 842, 964, 1701
BstMAI GTCTC 1 cut(s) 1392
BstMBI GATC 3 cut(s) 839, 961, 1698
BstMCI CGRYCG 2 cut(s) 229, 1643
BstMWI GCNNNNNNNGC 3 cut(s) 324, 418, 478
BstNI CCWGG 2 cut(s) 520, 602
BstSCI CCNGG 5 cut(s) 261, 262, 294, 518, 600
BstSFI CTRYAG 1 cut(s) 352
BstSLI GKGCMC 1 cut(s) 1028
BstUI CGCG 4 cut(s) 284, 525, 552, 1421
BstV1I GCAGC 4 cut(s) 757, 872, 1266, 1751
BstX2I RGATCY 1 cut(s) 839
BstXI CCANNNNNNTGG 1 cut(s) 647
BstYI RGATCY 1 cut(s) 839
BstZ17I GTATAC 1 cut(s) 1182
BstZI CGGCCG 1 cut(s) 226
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 9 cut(s) 113, 228, 245, 267, 511, 540, 898, 1199, 1271
BtgI CCRYGG 4 cut(s) 108, 550, 740, 1685
BtsI GCAGTG 1 cut(s) 755
BtsIMutI CAGTG 3 cut(s) 755, 914, 1653
BveI ACCTGC 1 cut(s) 903
Cac8I GCNNGC 6 cut(s) 226, 316, 336, 821, 1509, 1737
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 1 cut(s) 1626
CfoI GCGC 3 cut(s) 474, 525, 1234
Cfr10I RCCGGY 2 cut(s) 224, 544
Cfr13I GGNCC 9 cut(s) 112, 208, 254, 265, 439, 509, 547, 598, 1682
Cfr42I CCGCGG 1 cut(s) 553
Cfr9I CCCGGG 1 cut(s) 262
CpoI CGGWCCG 2 cut(s) 254, 547
CseI GACGC 1 cut(s) 1427
Csp6I GTAC 6 cut(s) 379, 490, 496, 691, 1453, 1540
CspAI ACCGGT 1 cut(s) 544
CspI CGGWCCG 2 cut(s) 254, 547
CviAII CATG 5 cut(s) 448, 482, 1627, 1686, 1796
CviQI GTAC 6 cut(s) 379, 490, 496, 691, 1453, 1540
DdeI CTNAG 2 cut(s) 5, 924
DpnI GATC 3 cut(s) 841, 963, 1700
DpnII GATC 3 cut(s) 839, 961, 1698
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
EaeI YGGCCR 3 cut(s) 226, 538, 1269
EagI CGGCCG 1 cut(s) 226
Eam1104I CTCTTC 6 cut(s) 53, 647, 887, 1419, 1434, 1700
EarI CTCTTC 6 cut(s) 53, 647, 887, 1419, 1434, 1700
EciI GGCGGA 1 cut(s) 267
Ecl136II GAGCTC 2 cut(s) 406, 994
EclXI CGGCCG 1 cut(s) 226
Eco130I CCWWGG 1 cut(s) 1685
Eco24I GRGCYC 3 cut(s) 408, 423, 996
Eco47I GGWCC 6 cut(s) 208, 254, 439, 547, 598, 1682
Eco52I CGGCCG 1 cut(s) 226
Eco53kI GAGCTC 2 cut(s) 406, 994
Eco57I CTGAAG 1 cut(s) 1677
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 4 cut(s) 262, 422, 715, 995
EcoICRI GAGCTC 2 cut(s) 406, 994
EcoO109I RGGNCCY 1 cut(s) 208
EcoRI GAATTC 1 cut(s) 503
EcoRII CCWGG 2 cut(s) 518, 600
EcoT14I CCWWGG 1 cut(s) 1685
EcoT38I GRGCYC 3 cut(s) 408, 423, 996
ErhI CCWWGG 1 cut(s) 1685
Esp3I CGTCTC 1 cut(s) 1392
FaeI CATG 5 cut(s) 451, 485, 1630, 1689, 1799
FaqI GGGAC 2 cut(s) 221, 244
FatI CATG 5 cut(s) 447, 481, 1626, 1685, 1795
FauI CCCGC 5 cut(s) 159, 191, 198, 486, 518
FblI GTMKAC 1 cut(s) 1181
Fnu4HI GCNGC 6 cut(s) 725, 746, 861, 1255, 1258, 1740
FokI GGATG 9 cut(s) 124, 448, 1094, 1143, 1161, 1250, 1313, 1457, 1505
FriOI GRGCYC 3 cut(s) 408, 423, 996
Fsp4HI GCNGC 6 cut(s) 725, 746, 861, 1255, 1258, 1740
FspBI CTAG 3 cut(s) 837, 1508, 1791
GlaI GCGC 3 cut(s) 473, 524, 1233
GluI GCNGC 6 cut(s) 725, 746, 861, 1255, 1258, 1740
GsaI CCCAGC 1 cut(s) 1677
GsuI CTGGAG 1 cut(s) 392
HaeIII GGCC 9 cut(s) 113, 228, 245, 267, 511, 540, 898, 1199, 1271
HgaI GACGC 1 cut(s) 1427
HhaI GCGC 3 cut(s) 474, 525, 1234
Hin1II CATG 5 cut(s) 451, 485, 1630, 1689, 1799
Hin6I GCGC 3 cut(s) 472, 523, 1232
HinP1I GCGC 3 cut(s) 472, 523, 1232
HincII GTYRAC 2 cut(s) 948, 1417
HindII GTYRAC 2 cut(s) 948, 1417
HinfI GANTC 7 cut(s) 7, 270, 287, 341, 1063, 1153, 1714
Hpy166II GTNNAC 7 cut(s) 561, 753, 948, 1026, 1182, 1284, 1417
Hpy188I TCNGA 4 cut(s) 163, 733, 1068, 1492
Hpy188III TCNNGA 7 cut(s) 11, 361, 926, 959, 997, 1627, 1702
Hpy8I GTNNAC 7 cut(s) 561, 753, 948, 1026, 1182, 1284, 1417
Hpy99I CGWCG 3 cut(s) 539, 569, 1601
HpyCH4III ACNGT 4 cut(s) 109, 258, 1648, 1728
HpyCH4IV ACGT 1 cut(s) 888
HpyCH4V TGCA 5 cut(s) 860, 912, 1026, 1174, 1496
HpyF10VI GCNNNNNNNGC 3 cut(s) 324, 418, 478
HpyF3I CTNAG 2 cut(s) 5, 924
HpySE526I ACGT 1 cut(s) 888
Hsp92II CATG 5 cut(s) 451, 485, 1630, 1689, 1799
HspAI GCGC 3 cut(s) 472, 523, 1232
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
KspI CCGCGG 1 cut(s) 553
Kzo9I GATC 3 cut(s) 839, 961, 1698
LmnI GCTCC 2 cut(s) 231, 411
Lsp1109I GCAGC 4 cut(s) 757, 872, 1266, 1751
LweI GCATC 4 cut(s) 1183, 1219, 1269, 1483
MaeI CTAG 3 cut(s) 837, 1508, 1791
MaeII ACGT 1 cut(s) 888
MaeIII GTNAC 2 cut(s) 278, 574
MalI GATC 3 cut(s) 841, 963, 1700
MboI GATC 3 cut(s) 839, 961, 1698
MfeI CAATTG 2 cut(s) 665, 1553
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 4 cut(s) 408, 423, 996, 1028
MlyI GAGTC 2 cut(s) 16, 350
MmeI TCCRAC 2 cut(s) 186, 1185
MroNI GCCGGC 1 cut(s) 224
MseI TTAA 1 cut(s) 132
MslI CAYNNNNRTG 2 cut(s) 480, 1265
MspA1I CMGCKG 3 cut(s) 552, 1257, 1742
MspR9I CCNGG 5 cut(s) 263, 264, 296, 520, 602
MunI CAATTG 2 cut(s) 665, 1553
MvaI CCWGG 2 cut(s) 520, 602
MvnI CGCG 4 cut(s) 284, 525, 552, 1421
MwoI GCNNNNNNNGC 3 cut(s) 324, 418, 478
NaeI GCCGGC 1 cut(s) 226
NciI CCSGG 3 cut(s) 263, 264, 296
NcoI CCATGG 1 cut(s) 1685
NdeII GATC 3 cut(s) 839, 961, 1698
NgoMIV GCCGGC 1 cut(s) 224
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 5 cut(s) 451, 485, 1630, 1689, 1799
NlaIV GGNNCC 3 cut(s) 114, 209, 713
NmeAIII GCCGAG 2 cut(s) 364, 1297
NmuCI GTSAC 1 cut(s) 574
PaeR7I CTCGAG 1 cut(s) 995
PagI TCATGA 1 cut(s) 1626
PcsI WCGNNNNNNNCGW 1 cut(s) 737
PdiI GCCGGC 1 cut(s) 226
PfeI GAWTC 5 cut(s) 270, 287, 1063, 1153, 1714
PinAI ACCGGT 1 cut(s) 544
PkrI GCNGC 6 cut(s) 726, 747, 862, 1256, 1259, 1741
PleI GAGTC 2 cut(s) 15, 349
PpsI GAGTC 2 cut(s) 15, 349
Ppu21I YACGTR 1 cut(s) 889
PpuMI RGGWCCY 1 cut(s) 208
Psp124BI GAGCTC 2 cut(s) 408, 996
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 2 cut(s) 518, 600
PspFI CCCAGC 1 cut(s) 1673
PspGI CCWGG 2 cut(s) 518, 600
PspN4I GGNNCC 3 cut(s) 114, 209, 713
PspPI GGNCC 9 cut(s) 112, 208, 254, 265, 439, 509, 547, 598, 1682
PspPPI RGGWCCY 1 cut(s) 208
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 1 cut(s) 839
RsaI GTAC 6 cut(s) 380, 491, 497, 692, 1454, 1541
RsaNI GTAC 6 cut(s) 379, 490, 496, 691, 1453, 1540
RseI CAYNNNNRTG 2 cut(s) 480, 1265
Rsr2I CGGWCCG 2 cut(s) 254, 547
RsrII CGGWCCG 2 cut(s) 254, 547
SacI GAGCTC 2 cut(s) 408, 996
SacII CCGCGG 1 cut(s) 553
SaqAI TTAA 1 cut(s) 132
SatI GCNGC 6 cut(s) 725, 746, 861, 1255, 1258, 1740
Sau3AI GATC 3 cut(s) 839, 961, 1698
Sau96I GGNCC 9 cut(s) 112, 208, 254, 265, 439, 509, 547, 598, 1682
ScaI AGTACT 3 cut(s) 692, 1454, 1541
SchI GAGTC 2 cut(s) 16, 350
ScrFI CCNGG 5 cut(s) 263, 264, 296, 520, 602
SduI GDGCHC 4 cut(s) 408, 423, 996, 1028
SfaNI GCATC 4 cut(s) 1183, 1219, 1269, 1483
SfcI CTRYAG 1 cut(s) 352
Sfr274I CTCGAG 1 cut(s) 995
Sfr303I CCGCGG 1 cut(s) 553
SgrBI CCGCGG 1 cut(s) 553
SinI GGWCC 6 cut(s) 208, 254, 439, 547, 598, 1682
SlaI CTCGAG 1 cut(s) 995
SmaI CCCGGG 1 cut(s) 264
SmiMI CAYNNNNRTG 2 cut(s) 480, 1265
SmlI CTYRAG 2 cut(s) 359, 995
SmoI CTYRAG 2 cut(s) 359, 995
SspMI CTAG 3 cut(s) 837, 1508, 1791
SstI GAGCTC 2 cut(s) 408, 996
StyD4I CCNGG 5 cut(s) 261, 262, 294, 518, 600
StyI CCWWGG 1 cut(s) 1685
TaaI ACNGT 4 cut(s) 109, 258, 1648, 1728
TaiI ACGT 1 cut(s) 891
TaqI TCGA 5 cut(s) 273, 918, 996, 1582, 1747
TaqII GACCGA 1 cut(s) 1657
TatI WGTACW 3 cut(s) 690, 1452, 1539
TauI GCSGC 2 cut(s) 727, 1260
TfiI GAWTC 5 cut(s) 270, 287, 1063, 1153, 1714
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TscAI CASTG 3 cut(s) 755, 914, 1653
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 4 cut(s) 745, 860, 1254, 1739
Tsp45I GTSAC 1 cut(s) 574
TspDTI ATGAA 3 cut(s) 436, 1419, 1632
TspGWI ACGGA 6 cut(s) 513, 729, 986, 1167, 1301, 1550
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 3 cut(s) 755, 914, 1653
VneI GTGCAC 1 cut(s) 1024
VpaK11BI GGWCC 6 cut(s) 208, 254, 439, 547, 598, 1682
XapI RAATTY 5 cut(s) 157, 189, 503, 829, 1364
XhoI CTCGAG 1 cut(s) 995
XmaI CCCGGG 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 1181
XspI CTAG 3 cut(s) 837, 1508, 1791
ZrmI AGTACT 3 cut(s) 692, 1454, 1541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.