Rroxscaffold_1G00049340

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0016004
Physical Location & Seq
Forward (+)
69517693 .. 69520196
2504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00049340.1

Sequence Viewer

Length: 1761 bp
ATGCTGAGTCATGACCCTTCGCTCTCCCTCCAGCGCTCCAAAACGCTTCGGCATCAGAGCGGTGTCCGAAATTCCCAAATTACAGTCCCCAATTTCACATTTTCCCGCCAAATTCCGCGGGACTTGCGCGCGTTCGCCGGCCGGAGCAAGAAGAAGGCTGGAGGAGGTCCGGGAGGCTCCGGCGGAGACGGCCGAATCGATGCAAACTCCGAGTATCGCAAGGAGGCGAAGAGAAATGCTCGCCGGAAAACCAAGAAGCTCGCCGAGTCGATGTTCTACCGGCTCAAGAACCCGAGCCGGAACTACCCGGACAACTTCACACAGGACGAGCTCCAGCAAATTGGGCTCGGGTACGACCGTATGGTCCGGTTCATGGAGAAAGACGACCCGAATTTGCGCCACCCGGACGATTGGTACAAGTACGGCGAGTTCGGACCCTACTCGTGGAAAGGGGTCGTCGTCGGCGACCCGGTTCGGGGCCGGTTCACCGACGAAAGGGTGAGTATAATAAGTGAAGTTAGGGATGAGGAAGAGTGGGAGAAGATTGAGCAATTTGAAATGGGTCAAGATTTTGGGAAGAGATTGACTCAATTGGATAAGAAGATAGGGCATAGGTACTTTTGGGTGTTTGTGAGGCACCCGAAATGGCGGCTTTCGGATTTGCCGTGGGAGCAGTGGACTTTGGTTAGTGAGCTGGTGGTGGAAGCTGAGAAGAAGCAGAGGTTGGATAAGTGGAGCTTGATGGGTAGGCTTGGGAATTTGACTAGGTCATTGATAACTAAATGTGCAGCATGGATGAGGCCGGACATTTTGTATGTGAAGAGGCCGGTGTATCAGTGCCGGTTTGAGCCTCAGGATGATTTTTTTCATGTGTTGGTGCCGTTTCTGGATCCGAAAACAGAGCAGGATTACTTGTTTCAGTTGGAGAGAGAGGATGGGAGTGCTGAAATGTGTACTTATTATGGGGGGTTGTGTAAGATTGCGAAGGTGAATCAGAAGGCGTATGTGGATGATGTTGTTAAGGCTTATGAGAAGTTGAGTGATCAGGAGAAGTCTAGGTGTTTGGGGTTTTTGCTGAAGAATCATCCGGTTAAGCTGTTGCATCCGTATACGAAGGAGTGGAAAGCTAAGTTGGAGGAGTGGGAGTTGGGTTGTGATGCGCCGGATAGTGATGATGCTGACCTCCCTATCAATGCGGCAGAGAAGGAGTTTACAGATTGGGTTGAGGTTGATGATGAAGATGACAATGAGGGTGAGGACGAGGAACACAATGGTGATGAGAGTGATAGTGAGGAAAGTGATGTTGTTATAGATATGGAAGAGGGTGAAGATGATGTCTTGGGTGTCAAGGACGAGAATTTGAGTGAAGAAGAGGATGAGAAGTACTGGGAGGATGAGTTTGAAAAGGCTGCGACTAGTGCTGAAGGAATGGAAAAGCTAGCAAAACGTAGTGTAGAGATAACTGATAAGTTTTACAAGAAACAGTTGAGGGAAATGGAAGGAAATGAAGGTGGAAACTCAGTAGAAGATGGTGATGAAACTGCTATGAGGGGAAAACGACCGAAAATAAGTGAAGAAGAATGGAAGCTTGCTGGGTATGGTCCATGGAGGAAAAAGATTAAGAAGAGTAGAATTCCTCCACAGTTGTTCTTGCGAGCAGCAGTTAACCTGTTTACCTACAGAAACCTTGTGAAGGAGATTGTTTTGACTAGGCATGCAATTCTGGATGGTGATTTTCCTCACAAGGCTTCAAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

586

Amino Acids

68.25

Weight (kDa)

5.33

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14900
fragaria_vesca FvH4_3g18290
malus_domestica MD03G1243600.v1.1
prunus_persica Prupe.4G164700_v2.0.a1
pyrus_communis pycom03g19030
rosa_chinensis RchiOBHm_Chr5g0030921
rosa_laevigata RLG00000033272
rosa_multiflora Rmu_sc0001974.1_g000013
rosa_roxburghii Rroxscaffold_1G00049340
rosa_rugosa Rorug05G0121500
rosa_samantha Rh5AG214700 Rh5BG213600 Rh5CG237500 Rh5DG218100
rosa_wichuraiana Rw5G019630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
AccB1I GGYRCC 2 cut(s) 636, 877
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 1 cut(s) 1109
AccII CGCG 3 cut(s) 118, 129, 131
AciI CCGC 7 cut(s) 60, 106, 116, 118, 183, 649, 1196
AclWI GGATC 2 cut(s) 884, 897
AcoI YGGCCR 2 cut(s) 139, 190
AcsI RAATTY 6 cut(s) 70, 111, 391, 757, 1357, 1632
AcuI CTGAAG 2 cut(s) 1097, 1443
AfaI GTAC 6 cut(s) 353, 416, 422, 617, 955, 1385
AfeI AGCGCT 1 cut(s) 35
AfiI CCNNNNNNNGG 6 cut(s) 373, 444, 475, 476, 495, 1693
AgsI TTSAA 3 cut(s) 557, 1403, 1752
AhlI ACTAGT 1 cut(s) 1415
AjuI GAANNNNNNNTTGG 4 cut(s) 707, 739, 1115, 1147
AleI CACNNNNGTG 1 cut(s) 1272
AluBI AGCT 9 cut(s) 259, 331, 694, 707, 738, 1096, 1127, 1438, 1588
AluI AGCT 9 cut(s) 259, 331, 694, 707, 738, 1096, 1127, 1438, 1588
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 1 cut(s) 180
AlwI GGATC 2 cut(s) 884, 897
Ama87I CYCGRG 2 cut(s) 292, 347
Aor51HI AGCGCT 1 cut(s) 35
AoxI GGCC 5 cut(s) 139, 190, 478, 800, 824
ApeKI GCWGC 3 cut(s) 788, 1409, 1658
ApoI RAATTY 6 cut(s) 70, 111, 391, 757, 1357, 1632
AspLEI GCGC 5 cut(s) 36, 129, 131, 399, 1162
AspS9I GGNCC 5 cut(s) 167, 364, 434, 478, 1601
AsuC2I CCSGG 4 cut(s) 171, 308, 404, 470
AsuHPI GGTGA 8 cut(s) 478, 511, 1000, 1265, 1286, 1337, 1544, 1742
AsuNHI GCTAGC 1 cut(s) 1438
AvaI CYCGRG 2 cut(s) 292, 347
AvaII GGWCC 4 cut(s) 167, 364, 434, 1601
AxyI CCTNAGG 1 cut(s) 852
BaeI ACNNNNGTAYC 2 cut(s) 343, 376
BamHI GGATCC 1 cut(s) 889
BanI GGYRCC 2 cut(s) 636, 877
BanII GRGCYC 2 cut(s) 333, 348
BauI CACGAG 1 cut(s) 442
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 3 cut(s) 800, 1396, 1670
BccI CCATC 4 cut(s) 736, 929, 1523, 1721
BceAI ACGGC 4 cut(s) 205, 439, 649, 865
BclI TGATCA 1 cut(s) 1042
BcnI CCSGG 4 cut(s) 171, 308, 404, 470
BcoDI GTCTC 1 cut(s) 180
BcuI ACTAGT 1 cut(s) 1415
BfaI CTAG 5 cut(s) 765, 1056, 1416, 1439, 1710
BfmI CTRYAG 1 cut(s) 1678
BfoI RGCGCY 1 cut(s) 37
BisI GCNGC 5 cut(s) 650, 789, 1197, 1410, 1659
BlsI GCNGC 5 cut(s) 651, 790, 1198, 1411, 1660
BmcAI AGTACT 1 cut(s) 1385
Bme1390I CCNGG 4 cut(s) 171, 308, 404, 470
Bme18I GGWCC 4 cut(s) 167, 364, 434, 1601
BmeT110I CYCGRG 2 cut(s) 292, 347
BmgT120I GGNCC 5 cut(s) 167, 364, 434, 478, 1601
BmiI GGNNCC 6 cut(s) 178, 436, 479, 638, 879, 891
BmrFI CCNGG 4 cut(s) 171, 308, 404, 470
BmrI ACTGGG 1 cut(s) 1396
BmsI GCATC 5 cut(s) 61, 190, 1111, 1147, 1165
BmtI GCTAGC 1 cut(s) 1442
BmuI ACTGGG 1 cut(s) 1396
BplI GAGNNNNNCTC 4 cut(s) 223, 255, 571, 603
BpmI CTGGAG 3 cut(s) 14, 180, 317
BpuEI CTTGAG 1 cut(s) 269
BpuMI CCSGG 4 cut(s) 171, 308, 404, 470
Bsa29I ATCGAT 1 cut(s) 198
BsaJI CCNNGG 3 cut(s) 116, 665, 1604
BsaWI WCCGGW 2 cut(s) 366, 1087
BsaXI ACNNNNNCTCC 4 cut(s) 1130, 1160, 1382, 1412
Bsc4I CCNNNNNNNGG 6 cut(s) 373, 444, 475, 476, 495, 1693
Bse118I RCCGGY 5 cut(s) 137, 279, 480, 826, 840
Bse1I ACTGG 1 cut(s) 1391
Bse21I CCTNAGG 1 cut(s) 852
BseCI ATCGAT 1 cut(s) 198
BseDI CCNNGG 3 cut(s) 116, 665, 1604
BseLI CCNNNNNNNGG 6 cut(s) 373, 444, 475, 476, 495, 1693
BseMII CTCAG 3 cut(s) 699, 866, 1533
BseNI ACTGG 1 cut(s) 1391
BsePI GCGCGC 1 cut(s) 127
BseRI GAGGAG 2 cut(s) 177, 1151
BseX3I CGGCCG 2 cut(s) 139, 190
BseXI GCAGC 3 cut(s) 800, 1396, 1670
BseYI CCCAGC 1 cut(s) 1592
BsgI GTGCAG 1 cut(s) 807
Bsh1236I CGCG 3 cut(s) 118, 129, 131
Bsh1285I CGRYCG 4 cut(s) 142, 193, 358, 1562
BshFI GGCC 5 cut(s) 141, 192, 480, 802, 826
BshNI GGYRCC 2 cut(s) 636, 877
BshVI ATCGAT 1 cut(s) 198
BsiEI CGRYCG 4 cut(s) 142, 193, 358, 1562
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 2 cut(s) 292, 347
BslFI GGGAC 2 cut(s) 71, 134
BslI CCNNNNNNNGG 6 cut(s) 373, 444, 475, 476, 495, 1693
BsmAI GTCTC 1 cut(s) 180
BsmBI CGTCTC 1 cut(s) 180
BsmFI GGGAC 2 cut(s) 71, 134
BsnI GGCC 5 cut(s) 141, 192, 480, 802, 826
BsoBI CYCGRG 2 cut(s) 292, 347
Bsp1286I GDGCHC 2 cut(s) 333, 348
Bsp143I GATC 2 cut(s) 889, 1042
Bsp19I CCATGG 1 cut(s) 1604
BspACI CCGC 7 cut(s) 60, 106, 116, 118, 183, 649, 1196
BspANI GGCC 5 cut(s) 141, 192, 480, 802, 826
BspCNI CTCAG 3 cut(s) 700, 865, 1532
BspDI ATCGAT 1 cut(s) 198
BspFNI CGCG 3 cut(s) 118, 129, 131
BspHI TCATGA 1 cut(s) 10
BspLI GGNNCC 6 cut(s) 178, 436, 479, 638, 879, 891
BspOI GCTAGC 1 cut(s) 1442
BspPI GGATC 2 cut(s) 884, 897
BspT107I GGYRCC 2 cut(s) 636, 877
BsrBI CCGCTC 1 cut(s) 60
BsrFI RCCGGY 5 cut(s) 137, 279, 480, 826, 840
BsrI ACTGG 1 cut(s) 1391
BssAI RCCGGY 5 cut(s) 137, 279, 480, 826, 840
BssECI CCNNGG 3 cut(s) 116, 665, 1604
BssHII GCGCGC 1 cut(s) 127
BssMI GATC 2 cut(s) 889, 1042
BssNAI GTATAC 1 cut(s) 1110
BssSI CACGAG 1 cut(s) 442
BssT1I CCWWGG 1 cut(s) 1604
Bst1107I GTATAC 1 cut(s) 1110
Bst2BI CACGAG 1 cut(s) 442
Bst4CI ACNGT 4 cut(s) 85, 359, 1485, 1644
Bst6I CTCTTC 7 cut(s) 224, 525, 572, 815, 1314, 1365, 1619
BstC8I GCNNGC 8 cut(s) 129, 139, 241, 261, 1440, 1590, 1656, 1716
BstDEI CTNAG 5 cut(s) 5, 708, 852, 1128, 1519
BstDSI CCRYGG 3 cut(s) 116, 665, 1604
BstENI CCTNNNNNAGG 1 cut(s) 1691
BstFNI CGCG 3 cut(s) 118, 129, 131
BstH2I RGCGCY 1 cut(s) 37
BstHHI GCGC 5 cut(s) 36, 129, 131, 399, 1162
BstKTI GATC 2 cut(s) 892, 1045
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 2 cut(s) 889, 1042
BstMCI CGRYCG 4 cut(s) 142, 193, 358, 1562
BstMWI GCNNNNNNNGC 5 cut(s) 124, 189, 343, 670, 1418
BstNSI RCATGY 1 cut(s) 1718
BstSCI CCNGG 4 cut(s) 169, 306, 402, 468
BstSFI CTRYAG 1 cut(s) 1678
BstUI CGCG 3 cut(s) 118, 129, 131
BstV1I GCAGC 3 cut(s) 800, 1396, 1670
BstX2I RGATCY 1 cut(s) 889
BstXI CCANNNNNNTGG 1 cut(s) 341
BstYI RGATCY 1 cut(s) 889
BstZ17I GTATAC 1 cut(s) 1110
BstZI CGGCCG 2 cut(s) 139, 190
Bsu15I ATCGAT 1 cut(s) 198
Bsu36I CCTNAGG 1 cut(s) 852
BsuRI GGCC 5 cut(s) 141, 192, 480, 802, 826
BsuTUI ATCGAT 1 cut(s) 198
BtgI CCRYGG 3 cut(s) 116, 665, 1604
BtsI GCAGTG 1 cut(s) 680
BtsIMutI CAGTG 2 cut(s) 680, 842
Cac8I GCNNGC 8 cut(s) 129, 139, 241, 261, 1440, 1590, 1656, 1716
CciI TCATGA 1 cut(s) 10
CfoI GCGC 5 cut(s) 36, 129, 131, 399, 1162
Cfr10I RCCGGY 5 cut(s) 137, 279, 480, 826, 840
Cfr13I GGNCC 5 cut(s) 167, 364, 434, 478, 1601
Cfr42I CCGCGG 1 cut(s) 119
ClaI ATCGAT 1 cut(s) 198
Csp6I GTAC 6 cut(s) 352, 415, 421, 616, 954, 1384
CviAII CATG 6 cut(s) 11, 373, 792, 869, 1605, 1715
CviQI GTAC 6 cut(s) 352, 415, 421, 616, 954, 1384
DdeI CTNAG 5 cut(s) 5, 708, 852, 1128, 1519
DpnI GATC 2 cut(s) 891, 1044
DpnII GATC 2 cut(s) 889, 1042
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 2 cut(s) 139, 190
EagI CGGCCG 2 cut(s) 139, 190
Eam1104I CTCTTC 7 cut(s) 224, 525, 572, 815, 1314, 1365, 1619
EarI CTCTTC 7 cut(s) 224, 525, 572, 815, 1314, 1365, 1619
EciI GGCGGA 1 cut(s) 198
Ecl136II GAGCTC 1 cut(s) 331
EclXI CGGCCG 2 cut(s) 139, 190
Eco130I CCWWGG 1 cut(s) 1604
Eco24I GRGCYC 2 cut(s) 333, 348
Eco47I GGWCC 4 cut(s) 167, 364, 434, 1601
Eco47III AGCGCT 1 cut(s) 35
Eco52I CGGCCG 2 cut(s) 139, 190
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 2 cut(s) 1097, 1443
Eco81I CCTNAGG 1 cut(s) 852
Eco88I CYCGRG 2 cut(s) 292, 347
EcoICRI GAGCTC 1 cut(s) 331
EcoNI CCTNNNNNAGG 1 cut(s) 1691
EcoRI GAATTC 1 cut(s) 1632
EcoT14I CCWWGG 1 cut(s) 1604
EcoT38I GRGCYC 2 cut(s) 333, 348
ErhI CCWWGG 1 cut(s) 1604
Esp3I CGTCTC 1 cut(s) 180
FaeI CATG 6 cut(s) 14, 376, 795, 872, 1608, 1718
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FaqI GGGAC 2 cut(s) 71, 134
FatI CATG 6 cut(s) 10, 372, 791, 868, 1604, 1714
FauI CCCGC 2 cut(s) 111, 113
FbaI TGATCA 1 cut(s) 1042
FblI GTMKAC 1 cut(s) 1109
Fnu4HI GCNGC 5 cut(s) 650, 789, 1197, 1410, 1659
FriOI GRGCYC 2 cut(s) 333, 348
Fsp4HI GCNGC 5 cut(s) 650, 789, 1197, 1410, 1659
FspBI CTAG 5 cut(s) 765, 1056, 1416, 1439, 1710
GlaI GCGC 5 cut(s) 35, 128, 130, 398, 1161
GluI GCNGC 5 cut(s) 650, 789, 1197, 1410, 1659
GsaI CCCAGC 1 cut(s) 1596
GsuI CTGGAG 3 cut(s) 14, 180, 317
HaeII RGCGCY 1 cut(s) 37
HaeIII GGCC 5 cut(s) 141, 192, 480, 802, 826
HhaI GCGC 5 cut(s) 36, 129, 131, 399, 1162
Hin1II CATG 6 cut(s) 14, 376, 795, 872, 1608, 1718
Hin6I GCGC 5 cut(s) 34, 127, 129, 397, 1160
HinP1I GCGC 5 cut(s) 34, 127, 129, 397, 1160
HincII GTYRAC 1 cut(s) 1666
HindII GTYRAC 1 cut(s) 1666
HindIII AAGCTT 1 cut(s) 1586
HinfI GANTC 6 cut(s) 7, 195, 266, 586, 991, 1081
HpaI GTTAAC 1 cut(s) 1666
HphI GGTGA 8 cut(s) 478, 511, 1000, 1265, 1286, 1337, 1544, 1742
Hpy166II GTNNAC 7 cut(s) 486, 678, 954, 1110, 1212, 1666, 1674
Hpy188I TCNGA 7 cut(s) 57, 68, 211, 434, 658, 894, 996
Hpy188III TCNNGA 7 cut(s) 11, 286, 566, 854, 887, 1046, 1724
Hpy8I GTNNAC 7 cut(s) 486, 678, 954, 1110, 1212, 1666, 1674
Hpy99I CGWCG 3 cut(s) 461, 464, 494
HpyCH4III ACNGT 4 cut(s) 85, 359, 1485, 1644
HpyCH4IV ACGT 1 cut(s) 1447
HpyCH4V TGCA 4 cut(s) 203, 788, 1102, 1718
HpyF10VI GCNNNNNNNGC 5 cut(s) 124, 189, 343, 670, 1418
HpyF3I CTNAG 5 cut(s) 5, 708, 852, 1128, 1519
HpySE526I ACGT 1 cut(s) 1447
Hsp92II CATG 6 cut(s) 14, 376, 795, 872, 1608, 1718
HspAI GCGC 5 cut(s) 34, 127, 129, 397, 1160
KroI GCCGGC 1 cut(s) 137
KroNI GCCGGC 1 cut(s) 139
Ksp22I TGATCA 1 cut(s) 1042
KspAI GTTAAC 1 cut(s) 1666
KspI CCGCGG 1 cut(s) 119
Kzo9I GATC 2 cut(s) 889, 1042
LmnI GCTCC 6 cut(s) 41, 144, 182, 336, 670, 735
Lsp1109I GCAGC 3 cut(s) 800, 1396, 1670
LweI GCATC 5 cut(s) 61, 190, 1111, 1147, 1165
MaeI CTAG 5 cut(s) 765, 1056, 1416, 1439, 1710
MaeII ACGT 1 cut(s) 1447
MalI GATC 2 cut(s) 891, 1044
MbiI CCGCTC 1 cut(s) 60
MboI GATC 2 cut(s) 889, 1042
MfeI CAATTG 1 cut(s) 590
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 2 cut(s) 333, 348
MlyI GAGTC 3 cut(s) 16, 275, 580
MmeI TCCRAC 3 cut(s) 705, 903, 1113
MroNI GCCGGC 1 cut(s) 137
MseI TTAA 4 cut(s) 1020, 1092, 1620, 1665
MslI CAYNNNNRTG 1 cut(s) 1272
MspA1I CMGCKG 1 cut(s) 118
MspR9I CCNGG 4 cut(s) 171, 308, 404, 470
MunI CAATTG 1 cut(s) 590
MvnI CGCG 3 cut(s) 118, 129, 131
MwoI GCNNNNNNNGC 5 cut(s) 124, 189, 343, 670, 1418
NaeI GCCGGC 1 cut(s) 139
NciI CCSGG 4 cut(s) 171, 308, 404, 470
NcoI CCATGG 1 cut(s) 1604
NdeII GATC 2 cut(s) 889, 1042
NgoMIV GCCGGC 1 cut(s) 137
NheI GCTAGC 1 cut(s) 1438
NlaIII CATG 6 cut(s) 14, 376, 795, 872, 1608, 1718
NlaIV GGNNCC 6 cut(s) 178, 436, 479, 638, 879, 891
NmeAIII GCCGAG 1 cut(s) 289
NspI RCATGY 1 cut(s) 1718
OliI CACNNNNGTG 1 cut(s) 1272
PaeI GCATGC 1 cut(s) 1718
PagI TCATGA 1 cut(s) 10
PauI GCGCGC 1 cut(s) 127
PcsI WCGNNNNNNNCGW 3 cut(s) 195, 462, 662
PdiI GCCGGC 1 cut(s) 139
PfeI GAWTC 3 cut(s) 195, 991, 1081
PflFI GACNNNGTC 1 cut(s) 766
PfoI TCCNGGA 1 cut(s) 169
PkrI GCNGC 5 cut(s) 651, 790, 1198, 1411, 1660
PleI GAGTC 3 cut(s) 15, 274, 580
PpsI GAGTC 3 cut(s) 15, 274, 580
Psp124BI GAGCTC 1 cut(s) 333
PspFI CCCAGC 1 cut(s) 1592
PspN4I GGNNCC 6 cut(s) 178, 436, 479, 638, 879, 891
PspPI GGNCC 5 cut(s) 167, 364, 434, 478, 1601
PsrI GAACNNNNNNTAC 2 cut(s) 413, 445
PsuI RGATCY 1 cut(s) 889
PsyI GACNNNGTC 1 cut(s) 766
PteI GCGCGC 1 cut(s) 127
RsaI GTAC 6 cut(s) 353, 416, 422, 617, 955, 1385
RsaNI GTAC 6 cut(s) 352, 415, 421, 616, 954, 1384
RseI CAYNNNNRTG 1 cut(s) 1272
SacI GAGCTC 1 cut(s) 333
SacII CCGCGG 1 cut(s) 119
SaqAI TTAA 4 cut(s) 1020, 1092, 1620, 1665
SatI GCNGC 5 cut(s) 650, 789, 1197, 1410, 1659
Sau3AI GATC 2 cut(s) 889, 1042
Sau96I GGNCC 5 cut(s) 167, 364, 434, 478, 1601
ScaI AGTACT 1 cut(s) 1385
SchI GAGTC 3 cut(s) 16, 275, 580
ScrFI CCNGG 4 cut(s) 171, 308, 404, 470
SduI GDGCHC 2 cut(s) 333, 348
SfaNI GCATC 5 cut(s) 61, 190, 1111, 1147, 1165
SfcI CTRYAG 1 cut(s) 1678
Sfr303I CCGCGG 1 cut(s) 119
SgrBI CCGCGG 1 cut(s) 119
SinI GGWCC 4 cut(s) 167, 364, 434, 1601
SmiMI CAYNNNNRTG 1 cut(s) 1272
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
SpeI ACTAGT 1 cut(s) 1415
SphI GCATGC 1 cut(s) 1718
SsiI CCGC 7 cut(s) 60, 106, 116, 118, 183, 649, 1196
SspMI CTAG 5 cut(s) 765, 1056, 1416, 1439, 1710
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 4 cut(s) 169, 306, 402, 468
StyI CCWWGG 1 cut(s) 1604
TaaI ACNGT 4 cut(s) 85, 359, 1485, 1644
TaiI ACGT 1 cut(s) 1450
TaqI TCGA 2 cut(s) 198, 269
TaqII GACCGA 1 cut(s) 1576
TatI WGTACW 2 cut(s) 953, 1383
TauI GCSGC 2 cut(s) 652, 1199
TfiI GAWTC 3 cut(s) 195, 991, 1081
Tru1I TTAA 4 cut(s) 1020, 1092, 1620, 1665
Tru9I TTAA 4 cut(s) 1020, 1092, 1620, 1665
TscAI CASTG 2 cut(s) 680, 842
TseI GCWGC 3 cut(s) 788, 1409, 1658
TspDTI ATGAA 5 cut(s) 361, 857, 1251, 1521, 1551
TspGWI ACGGA 1 cut(s) 1095
TspRI CASTG 2 cut(s) 680, 842
Tth111I GACNNNGTC 1 cut(s) 766
VpaK11BI GGWCC 4 cut(s) 167, 364, 434, 1601
XagI CCTNNNNNAGG 1 cut(s) 1691
XapI RAATTY 6 cut(s) 70, 111, 391, 757, 1357, 1632
XceI RCATGY 1 cut(s) 1718
XmiI GTMKAC 1 cut(s) 1109
XspI CTAG 5 cut(s) 765, 1056, 1416, 1439, 1710
ZrmI AGTACT 1 cut(s) 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.