RchiOBHm_Chr5g0030921

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0016004
Physical Location & Seq
Reverse (-)
24568421 .. 24570591
2171 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31021

Sequence Viewer

Length: 1842 bp
ATGCTGAGTCAAGACCCTTCGCTCTGTAAAACCCTAAACCCTTCCCTCTTTCTTCTCACTCCATTTCCGAACCCTCTCCGCCAAACCCTAACCCTCAAGCCCTCCAGCGCTCCAAAACGCTTCGGCATCAGAGCTTTGTCCAAAATTCCCCAAATTGCCGTCCCCAGTTTCACATTTTCCCGCCAAATTCCGCGGGACCTGCGCGCGTTCGCCGGCCGGAGCAAGAAGAAGGCTGGAGGAGGTCCGGGAGGCTCCGGCGGAGACGGCCGAATCGATGCAAACTCCGAGTATCGCAAGGAGGCGAAGAGAAATGCTCGCCGGAAAACCAAGAAGCTCGCCGAGTCGATGTTCTACCGGCTCAAGAACCCGAGCCGCAACTACCCGGACAACTTCACACAGGACGAGCTCCAGCAAATTGGGCTCGGGTACGACCGTATGGTCCGGTTCATGGAGAAAGACGACCCGAATTTGCGCCACCCGGACGATTGGTACAAGTACGGCGAGTTCGGACCCTACTCGTGGAAAGGGGTCGTCGTCGGCGACCCGGTTCGGGGCCGGTTCACCGACGAAAGGGTGAGTATAATTAGTGAAGTTAGGGATGAGGAAGAGTGGGAGAAGATTGAGCAATTTGAAATGGGTCAAGATTTTGGGAAGAGATTGACTCAATTGGATAAGAAGATAGGGCATAGGTACTTCTGGGTGTTTGTGAGGCACCCGAAATGGCGGCTTTCGGATTTGCCGTGGGAGCAGTGGACTTTGGTTAGTGAGCTGGTGGTGGAAGCTGAGAAGAAGCAGAGGTTGGACAAGTGGAGCTTGATGGGTAGGCTTGGGAATTTGACTAGGTCATTGATAACTAAATGTGCAGCATGGATGAGGCCGGACATTTTGTATGTGAAGAGGCCGGTGTATCAGTGCCGGTTTGAGCCTCAGGATGACTTTTTTCATGTGTTGGTGCCGTTTCTGGATCCGAAAACAGAGCAGGATTACTTGTTTCAGTTGGAGAGAGAGGATGGGAGTGCTGAAATGTGTACATATTATGCGGGGTTGTGTAAGATTGCGAAGGTGAATCAGAAGGCGTATGTGGATGATGTGGTTAAGGCTTATGAGAAGTTGAGTGATCAGGAGAAGTCTAGGTGTTTGGGGTTTTTGCTGAAGAATCATCCGGTTAAGCTGTTGCATCCATATACGAAGGAGTGGAAAGCTAAGTTGGAGGAGTGGGAGTTGGGTTGTGATGCTCCGGATAGTGATGATGCTGACCTCCCTATCAATGCGGCAGAGAAGGAGTTCACGGATTGGGTTGAGGTTGATGATGAGGGTGACAATGAGGGTGAGGGTGAGGGTGAGGATGAGAATGACGATGGGAGTGATGATGAGGAAAGTGATGTTGTTATAGATATGGAAGAGGGTGAAGATGATGTCTTGGGTGTCAAGGACGAGAATTTGAGTGAAGAAGAGGATGAGAAGTATTGGGAGGATGAGTTTAAAAAGGCTGCGACTAGTGCTGAAGGAATGGAAAAGCTAGCAAAACGCAGTGTAGAGATAACTGATAAGTTTTACAAGAAACAATTGAGGGAAATGGAAGGAAATGAAGGTGGAAACTCAGTAGAAGATGGTGACGAAACTGTCATGAGGGGAAAACGACCGAAAATAAGTGAAGAAGAATGGAAGCTTGCTGGGTATGGTCCATGGAGGAAAAGGATTAAGAAGAGTAGAATTCCTCCACAGTTGTTCTTGCGAGCAGCAGTTAACCTATTTACTTACAGAAACCTTGTGAAGGAAATTGTTTTGACTAGACATGCAATTCTTGATGGTGATTTTCCTCACAAGGCTTCAAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

613

Amino Acids

71.03

Weight (kDa)

5.39

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14900
fragaria_vesca FvH4_3g18290
malus_domestica MD03G1243600.v1.1
prunus_persica Prupe.4G164700_v2.0.a1
pyrus_communis pycom03g19030
rosa_chinensis RchiOBHm_Chr5g0030921
rosa_laevigata RLG00000033272
rosa_multiflora Rmu_sc0001974.1_g000013
rosa_roxburghii Rroxscaffold_1G00049340
rosa_rugosa Rorug05G0121500
rosa_samantha Rh5AG214700 Rh5BG213600 Rh5CG237500 Rh5DG218100
rosa_wichuraiana Rw5G019630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 437, 1622
Acc36I ACCTGC 1 cut(s) 207
AccB1I GGYRCC 2 cut(s) 711, 952
AccII CGCG 3 cut(s) 193, 204, 206
AccIII TCCGGA 1 cut(s) 1237
AciI CCGC 9 cut(s) 79, 181, 191, 193, 258, 373, 724, 1040, 1271
AclWI GGATC 2 cut(s) 959, 972
AcoI YGGCCR 2 cut(s) 214, 265
AcsI RAATTY 6 cut(s) 144, 186, 466, 832, 1438, 1713
AcuI CTGAAG 2 cut(s) 1172, 1524
AfaI GTAC 5 cut(s) 428, 491, 497, 692, 1030
AfeI AGCGCT 1 cut(s) 109
AfiI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1774
AgsI TTSAA 2 cut(s) 632, 1833
AhlI ACTAGT 1 cut(s) 1496
AjuI GAANNNNNNNTTGG 4 cut(s) 782, 814, 1190, 1222
Alw21I GWGCWC 1 cut(s) 408
Alw26I GTCTC 1 cut(s) 255
AlwI GGATC 2 cut(s) 959, 972
Ama87I CYCGRG 2 cut(s) 367, 422
Aor13HI TCCGGA 1 cut(s) 1237
Aor51HI AGCGCT 1 cut(s) 109
AoxI GGCC 5 cut(s) 214, 265, 553, 875, 899
ApeKI GCWGC 3 cut(s) 863, 1490, 1739
ApoI RAATTY 6 cut(s) 144, 186, 466, 832, 1438, 1713
Asp700I GAANNNNTTC 1 cut(s) 1283
AspLEI GCGC 4 cut(s) 110, 204, 206, 474
AspS9I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1682
AsuC2I CCSGG 4 cut(s) 246, 383, 479, 545
AsuNHI GCTAGC 1 cut(s) 1519
AvaI CYCGRG 2 cut(s) 367, 422
AvaII GGWCC 5 cut(s) 196, 242, 439, 509, 1682
AxyI CCTNAGG 1 cut(s) 927
BaeI ACNNNNGTAYC 2 cut(s) 418, 451
BamHI GGATCC 1 cut(s) 964
BanI GGYRCC 2 cut(s) 711, 952
BanII GRGCYC 2 cut(s) 408, 423
BauI CACGAG 1 cut(s) 517
Bbv12I GWGCWC 1 cut(s) 408
BbvI GCAGC 3 cut(s) 875, 1477, 1751
BccI CCATC 5 cut(s) 811, 1004, 1352, 1604, 1802
BceAI ACGGC 5 cut(s) 143, 280, 514, 724, 940
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 4 cut(s) 246, 383, 479, 545
BcoDI GTCTC 1 cut(s) 255
BcuI ACTAGT 1 cut(s) 1496
BfaI CTAG 5 cut(s) 840, 1131, 1497, 1520, 1791
BfoI RGCGCY 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 207
BisI GCNGC 6 cut(s) 373, 725, 864, 1272, 1491, 1740
BlsI GCNGC 6 cut(s) 374, 726, 865, 1273, 1492, 1741
Bme1390I CCNGG 4 cut(s) 246, 383, 479, 545
Bme18I GGWCC 5 cut(s) 196, 242, 439, 509, 1682
BmeT110I CYCGRG 2 cut(s) 367, 422
BmgT120I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1682
BmiI GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
BmrFI CCNGG 4 cut(s) 246, 383, 479, 545
BmrI ACTGGG 1 cut(s) 159
BmsI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
BmtI GCTAGC 1 cut(s) 1523
BmuI ACTGGG 1 cut(s) 159
BplI GAGNNNNNCTC 4 cut(s) 298, 330, 646, 678
BpmI CTGGAG 3 cut(s) 88, 255, 392
BpuEI CTTGAG 2 cut(s) 80, 344
BpuMI CCSGG 4 cut(s) 246, 383, 479, 545
Bsa29I ATCGAT 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 191, 740, 1685
BsaWI WCCGGW 3 cut(s) 441, 1162, 1237
BsaXI ACNNNNNCTCC 4 cut(s) 1205, 1235, 1463, 1493
Bsc4I CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1774
Bse118I RCCGGY 5 cut(s) 212, 354, 555, 901, 915
Bse1I ACTGG 1 cut(s) 165
Bse21I CCTNAGG 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 1237
BseCI ATCGAT 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 191, 740, 1685
BseLI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1774
BseMII CTCAG 3 cut(s) 774, 941, 1614
BseNI ACTGG 1 cut(s) 165
BsePI GCGCGC 1 cut(s) 202
BseRI GAGGAG 2 cut(s) 252, 1226
BseX3I CGGCCG 2 cut(s) 214, 265
BseXI GCAGC 3 cut(s) 875, 1477, 1751
BseYI CCCAGC 1 cut(s) 1673
BsgI GTGCAG 1 cut(s) 882
Bsh1236I CGCG 3 cut(s) 193, 204, 206
Bsh1285I CGRYCG 4 cut(s) 217, 268, 433, 1643
BshFI GGCC 5 cut(s) 216, 267, 555, 877, 901
BshNI GGYRCC 2 cut(s) 711, 952
BshVI ATCGAT 1 cut(s) 273
BsiEI CGRYCG 4 cut(s) 217, 268, 433, 1643
BsiHKAI GWGCWC 1 cut(s) 408
BsiHKCI CYCGRG 2 cut(s) 367, 422
BslFI GGGAC 2 cut(s) 146, 209
BslI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1774
BsmAI GTCTC 1 cut(s) 255
BsmBI CGTCTC 1 cut(s) 255
BsmFI GGGAC 2 cut(s) 146, 209
BsnI GGCC 5 cut(s) 216, 267, 555, 877, 901
BsoBI CYCGRG 2 cut(s) 367, 422
Bsp1286I GDGCHC 2 cut(s) 408, 423
Bsp13I TCCGGA 1 cut(s) 1237
Bsp1407I TGTACA 1 cut(s) 1028
Bsp143I GATC 2 cut(s) 964, 1117
Bsp19I CCATGG 1 cut(s) 1685
BspACI CCGC 9 cut(s) 79, 181, 191, 193, 258, 373, 724, 1040, 1271
BspANI GGCC 5 cut(s) 216, 267, 555, 877, 901
BspCNI CTCAG 3 cut(s) 775, 940, 1613
BspDI ATCGAT 1 cut(s) 273
BspEI TCCGGA 1 cut(s) 1237
BspFNI CGCG 3 cut(s) 193, 204, 206
BspHI TCATGA 1 cut(s) 1626
BspLI GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
BspMI ACCTGC 1 cut(s) 207
BspOI GCTAGC 1 cut(s) 1523
BspPI GGATC 2 cut(s) 959, 972
BspT107I GGYRCC 2 cut(s) 711, 952
BsrFI RCCGGY 5 cut(s) 212, 354, 555, 901, 915
BsrGI TGTACA 1 cut(s) 1028
BsrI ACTGG 1 cut(s) 165
BssAI RCCGGY 5 cut(s) 212, 354, 555, 901, 915
BssECI CCNNGG 3 cut(s) 191, 740, 1685
BssHII GCGCGC 1 cut(s) 202
BssMI GATC 2 cut(s) 964, 1117
BssSI CACGAG 1 cut(s) 517
BssT1I CCWWGG 1 cut(s) 1685
Bst2BI CACGAG 1 cut(s) 517
Bst4CI ACNGT 3 cut(s) 434, 1624, 1725
Bst6I CTCTTC 7 cut(s) 299, 600, 647, 890, 1395, 1446, 1700
BstAUI TGTACA 1 cut(s) 1028
BstC8I GCNNGC 7 cut(s) 204, 214, 316, 336, 1521, 1671, 1737
BstDEI CTNAG 5 cut(s) 5, 783, 927, 1203, 1600
BstDSI CCRYGG 3 cut(s) 191, 740, 1685
BstENI CCTNNNNNAGG 1 cut(s) 1772
BstFNI CGCG 3 cut(s) 193, 204, 206
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 4 cut(s) 110, 204, 206, 474
BstKTI GATC 2 cut(s) 967, 1120
BstMAI GTCTC 1 cut(s) 255
BstMBI GATC 2 cut(s) 964, 1117
BstMCI CGRYCG 4 cut(s) 217, 268, 433, 1643
BstMWI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1499
BstNSI RCATGY 1 cut(s) 1799
BstSCI CCNGG 4 cut(s) 244, 381, 477, 543
BstUI CGCG 3 cut(s) 193, 204, 206
BstV1I GCAGC 3 cut(s) 875, 1477, 1751
BstX2I RGATCY 1 cut(s) 964
BstXI CCANNNNNNTGG 1 cut(s) 416
BstYI RGATCY 1 cut(s) 964
BstZI CGGCCG 2 cut(s) 214, 265
Bsu15I ATCGAT 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 927
BsuRI GGCC 5 cut(s) 216, 267, 555, 877, 901
BsuTUI ATCGAT 1 cut(s) 273
BtgI CCRYGG 3 cut(s) 191, 740, 1685
BtsI GCAGTG 2 cut(s) 755, 1537
BtsIMutI CAGTG 3 cut(s) 755, 917, 1537
BveI ACCTGC 1 cut(s) 207
Cac8I GCNNGC 7 cut(s) 204, 214, 316, 336, 1521, 1671, 1737
CciI TCATGA 1 cut(s) 1626
CfoI GCGC 4 cut(s) 110, 204, 206, 474
Cfr10I RCCGGY 5 cut(s) 212, 354, 555, 901, 915
Cfr13I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1682
Cfr42I CCGCGG 1 cut(s) 194
ClaI ATCGAT 1 cut(s) 273
Csp6I GTAC 5 cut(s) 427, 490, 496, 691, 1029
CviAII CATG 6 cut(s) 448, 867, 944, 1627, 1686, 1796
CviQI GTAC 5 cut(s) 427, 490, 496, 691, 1029
DdeI CTNAG 5 cut(s) 5, 783, 927, 1203, 1600
DpnI GATC 2 cut(s) 966, 1119
DpnII GATC 2 cut(s) 964, 1117
DraI TTTAAA 1 cut(s) 1483
DrdI GACNNNNNNGTC 2 cut(s) 437, 1622
DseDI GACNNNNNNGTC 2 cut(s) 437, 1622
EaeI YGGCCR 2 cut(s) 214, 265
EagI CGGCCG 2 cut(s) 214, 265
Eam1104I CTCTTC 7 cut(s) 299, 600, 647, 890, 1395, 1446, 1700
EarI CTCTTC 7 cut(s) 299, 600, 647, 890, 1395, 1446, 1700
EciI GGCGGA 2 cut(s) 68, 273
Ecl136II GAGCTC 1 cut(s) 406
EclXI CGGCCG 2 cut(s) 214, 265
Eco130I CCWWGG 1 cut(s) 1685
Eco24I GRGCYC 2 cut(s) 408, 423
Eco47I GGWCC 5 cut(s) 196, 242, 439, 509, 1682
Eco47III AGCGCT 1 cut(s) 109
Eco52I CGGCCG 2 cut(s) 214, 265
Eco53kI GAGCTC 1 cut(s) 406
Eco57I CTGAAG 2 cut(s) 1172, 1524
Eco81I CCTNAGG 1 cut(s) 927
Eco88I CYCGRG 2 cut(s) 367, 422
EcoICRI GAGCTC 1 cut(s) 406
EcoNI CCTNNNNNAGG 1 cut(s) 1772
EcoO109I RGGNCCY 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 1713
EcoT14I CCWWGG 1 cut(s) 1685
EcoT38I GRGCYC 2 cut(s) 408, 423
ErhI CCWWGG 1 cut(s) 1685
Esp3I CGTCTC 1 cut(s) 255
FaeI CATG 6 cut(s) 451, 870, 947, 1630, 1689, 1799
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FaqI GGGAC 2 cut(s) 146, 209
FatI CATG 6 cut(s) 447, 866, 943, 1626, 1685, 1795
FauI CCCGC 3 cut(s) 186, 188, 1033
FbaI TGATCA 1 cut(s) 1117
Fnu4HI GCNGC 6 cut(s) 373, 725, 864, 1272, 1491, 1740
FriOI GRGCYC 2 cut(s) 408, 423
Fsp4HI GCNGC 6 cut(s) 373, 725, 864, 1272, 1491, 1740
FspBI CTAG 5 cut(s) 840, 1131, 1497, 1520, 1791
GlaI GCGC 4 cut(s) 109, 203, 205, 473
GluI GCNGC 6 cut(s) 373, 725, 864, 1272, 1491, 1740
GsaI CCCAGC 1 cut(s) 1677
GsuI CTGGAG 3 cut(s) 88, 255, 392
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 5 cut(s) 216, 267, 555, 877, 901
HhaI GCGC 4 cut(s) 110, 204, 206, 474
Hin1II CATG 6 cut(s) 451, 870, 947, 1630, 1689, 1799
Hin6I GCGC 4 cut(s) 108, 202, 204, 472
HinP1I GCGC 4 cut(s) 108, 202, 204, 472
HincII GTYRAC 1 cut(s) 1747
HindII GTYRAC 1 cut(s) 1747
HindIII AAGCTT 1 cut(s) 1667
HinfI GANTC 6 cut(s) 7, 270, 341, 661, 1066, 1156
HpaI GTTAAC 1 cut(s) 1747
Hpy166II GTNNAC 5 cut(s) 561, 753, 1029, 1287, 1747
Hpy188I TCNGA 7 cut(s) 69, 131, 286, 509, 733, 969, 1071
Hpy188III TCNNGA 9 cut(s) 11, 361, 641, 929, 962, 1121, 1238, 1627, 1805
Hpy8I GTNNAC 5 cut(s) 561, 753, 1029, 1287, 1747
Hpy99I CGWCG 3 cut(s) 536, 539, 569
HpyCH4III ACNGT 3 cut(s) 434, 1624, 1725
HpyCH4V TGCA 4 cut(s) 278, 863, 1177, 1799
HpyF10VI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1499
HpyF3I CTNAG 5 cut(s) 5, 783, 927, 1203, 1600
Hsp92II CATG 6 cut(s) 451, 870, 947, 1630, 1689, 1799
HspAI GCGC 4 cut(s) 108, 202, 204, 472
Kpn2I TCCGGA 1 cut(s) 1237
KroI GCCGGC 1 cut(s) 212
KroNI GCCGGC 1 cut(s) 214
Ksp22I TGATCA 1 cut(s) 1117
KspAI GTTAAC 1 cut(s) 1747
KspI CCGCGG 1 cut(s) 194
Kzo9I GATC 2 cut(s) 964, 1117
LmnI GCTCC 7 cut(s) 115, 219, 257, 411, 745, 810, 1240
Lsp1109I GCAGC 3 cut(s) 875, 1477, 1751
LweI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
MaeI CTAG 5 cut(s) 840, 1131, 1497, 1520, 1791
MaeIII GTNAC 2 cut(s) 1316, 1613
MalI GATC 2 cut(s) 966, 1119
MboI GATC 2 cut(s) 964, 1117
MfeI CAATTG 2 cut(s) 665, 1565
MflI RGATCY 1 cut(s) 964
MhlI GDGCHC 2 cut(s) 408, 423
MlyI GAGTC 3 cut(s) 16, 350, 655
MmeI TCCRAC 3 cut(s) 780, 978, 1188
MroI TCCGGA 1 cut(s) 1237
MroNI GCCGGC 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 1283
MseI TTAA 5 cut(s) 1095, 1167, 1482, 1701, 1746
MspA1I CMGCKG 1 cut(s) 193
MspR9I CCNGG 4 cut(s) 246, 383, 479, 545
MunI CAATTG 2 cut(s) 665, 1565
MvnI CGCG 3 cut(s) 193, 204, 206
MwoI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1499
NaeI GCCGGC 1 cut(s) 214
NciI CCSGG 4 cut(s) 246, 383, 479, 545
NcoI CCATGG 1 cut(s) 1685
NdeII GATC 2 cut(s) 964, 1117
NgoMIV GCCGGC 1 cut(s) 212
NheI GCTAGC 1 cut(s) 1519
NlaIII CATG 6 cut(s) 451, 870, 947, 1630, 1689, 1799
NlaIV GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
NmeAIII GCCGAG 1 cut(s) 364
NmuCI GTSAC 2 cut(s) 1316, 1613
NspI RCATGY 1 cut(s) 1799
PagI TCATGA 1 cut(s) 1626
PauI GCGCGC 1 cut(s) 202
PcsI WCGNNNNNNNCGW 3 cut(s) 270, 537, 737
PdiI GCCGGC 1 cut(s) 214
PdmI GAANNNNTTC 1 cut(s) 1283
PfeI GAWTC 3 cut(s) 270, 1066, 1156
PflFI GACNNNGTC 1 cut(s) 841
PfoI TCCNGGA 1 cut(s) 244
PkrI GCNGC 6 cut(s) 374, 726, 865, 1273, 1492, 1741
PleI GAGTC 3 cut(s) 15, 349, 655
PpsI GAGTC 3 cut(s) 15, 349, 655
PpuMI RGGWCCY 1 cut(s) 196
Psp124BI GAGCTC 1 cut(s) 408
Psp5II RGGWCCY 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 1673
PspN4I GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
PspPI GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1682
PspPPI RGGWCCY 1 cut(s) 196
PsrI GAACNNNNNNTAC 2 cut(s) 488, 520
PsuI RGATCY 1 cut(s) 964
PsyI GACNNNGTC 1 cut(s) 841
PteI GCGCGC 1 cut(s) 202
RsaI GTAC 5 cut(s) 428, 491, 497, 692, 1030
RsaNI GTAC 5 cut(s) 427, 490, 496, 691, 1029
SacI GAGCTC 1 cut(s) 408
SacII CCGCGG 1 cut(s) 194
SaqAI TTAA 5 cut(s) 1095, 1167, 1482, 1701, 1746
SatI GCNGC 6 cut(s) 373, 725, 864, 1272, 1491, 1740
Sau3AI GATC 2 cut(s) 964, 1117
Sau96I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1682
SchI GAGTC 3 cut(s) 16, 350, 655
ScrFI CCNGG 4 cut(s) 246, 383, 479, 545
SduI GDGCHC 2 cut(s) 408, 423
SfaNI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
Sfr303I CCGCGG 1 cut(s) 194
SgrBI CCGCGG 1 cut(s) 194
SinI GGWCC 5 cut(s) 196, 242, 439, 509, 1682
SmlI CTYRAG 2 cut(s) 95, 359
SmoI CTYRAG 2 cut(s) 95, 359
SpeI ACTAGT 1 cut(s) 1496
SsiI CCGC 9 cut(s) 79, 181, 191, 193, 258, 373, 724, 1040, 1271
SspMI CTAG 5 cut(s) 840, 1131, 1497, 1520, 1791
SstI GAGCTC 1 cut(s) 408
StyD4I CCNGG 4 cut(s) 244, 381, 477, 543
StyI CCWWGG 1 cut(s) 1685
TaaI ACNGT 3 cut(s) 434, 1624, 1725
TaqI TCGA 2 cut(s) 273, 344
TaqII GACCGA 1 cut(s) 1657
TatI WGTACW 1 cut(s) 1028
TauI GCSGC 3 cut(s) 375, 727, 1274
TfiI GAWTC 3 cut(s) 270, 1066, 1156
Tru1I TTAA 5 cut(s) 1095, 1167, 1482, 1701, 1746
Tru9I TTAA 5 cut(s) 1095, 1167, 1482, 1701, 1746
TscAI CASTG 3 cut(s) 755, 917, 1537
TseFI GTSAC 2 cut(s) 1316, 1613
TseI GCWGC 3 cut(s) 863, 1490, 1739
Tsp45I GTSAC 2 cut(s) 1316, 1613
TspDTI ATGAA 3 cut(s) 436, 932, 1602
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 3 cut(s) 755, 917, 1537
Tth111I GACNNNGTC 1 cut(s) 841
VpaK11BI GGWCC 5 cut(s) 196, 242, 439, 509, 1682
XagI CCTNNNNNAGG 1 cut(s) 1772
XapI RAATTY 6 cut(s) 144, 186, 466, 832, 1438, 1713
XceI RCATGY 1 cut(s) 1799
XmnI GAANNNNTTC 1 cut(s) 1283
XspI CTAG 5 cut(s) 840, 1131, 1497, 1520, 1791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.