Rmu_sc0001974.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001974.1
OG0016004
Physical Location & Seq
Forward (+)
54366 .. 56195
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001974.1_g000013.1.cds

Sequence Viewer

Length: 1830 bp
atgctgagtcaagacccttcgctctgtaaaaccctaaacccttccctctttcttctcactccatttccgaaccctctccgccaaaccctaaccctcaagccctccagcgctccaaaacgcttcggcatcagagctttgtccgaaattccccaaattgccgtccccaatttcacattttcccgccaaattccgcgggacctgcgcgcgttcgccggccggagcaagaagaaggccggaggaggtccgggaggctccggcggagacggccgaatcgatgcaaactccgagtatcgcaaggaggcgaagagaaatgctcgccggaaaaccaagaagctcgccgagtcgatgttctaccggctcaagaacccgagccggaactacccggacaacttcacacaggacgagctccagcaaattgggctcgggtacgaccgtatggtccggttcatggagaaagacgacccgaatttgcgccacccggacgattggtacaagtacggcgagttcggaccctactcgtggaaaggggtcgtcgtcggcgacccggttcggggccggttcaccgacgaaagggtgagtataattagtgaagttagggatgaggaagagtgggagaagattgagcaatttgaaatgggtcaagattttgggaagagattgactcaattggataagaagatagggcataggtacttctgggtgtttgtgaggcacccgaaatggcggctttcggatttgccgtgggagcagtggactttggttagtgagctggtggtggaagctgagaagaagcagaggttggataagtggagcttgatgggtaggcttgggaatttgactaggtcattgataactaaatgtgcagcatggatgaggccggacattttgtatgtgaagaggccggtgtatcagtgccggtttgagcctcaggatgatttttttcatgtgttggtgccgtttctggatccgaaaacggagcaggattacttgtttcagttggagagagaggatgggagtgctgaaatgtgtacttattatgcggggttgtgtaagattgcgaaggtgaatcagaaggcgtatgtggatgatgtggttaaggcttatgagaagttgagtgatcaggagaagtctaggtgtttggggtttttgctgaagaatcatccggttaagctgttgcatccatatacgaaggagtggaaagctaagttggaggagtgggagttgggttgtgatgctccggatagtgatgatgctgacctccctatcaatgcggcagagaaggagttcacggattgggttgaggttgatgatgagggtgacaatgagggtgaggatgagaatgacgatgggagtgatgatgaggaaagtgatgttgttatagatatggaagagggtgaagatgatgtcttgggtgtcaaggacgagaatttgagtgaagaagaggatgagaagtattgggaggatgagtttaaaaaggctgcgactagtgctgaaggaatggaaaagctagcaaaacagagtgtagagataactgataagttttacaagaaacaattgagggaaatggaaggaaatgaaggtggaaactcagtagaagatggtgacgaaactgtcatgaggggaaaacgaccgaaaataagtgaagaagaatggaagcttgctgggtatggtccatggaggaaaaggattaagaagagtagaattcctccacagttgttcttgcgagcagcagtcaacctatttacttacagaaaccttgtgaaggaaattgttttgactagacatgcaattcttgatggtgattttcctcacaaggcttcaaaggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

609

Amino Acids

70.66

Weight (kDa)

5.31

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14900
fragaria_vesca FvH4_3g18290
malus_domestica MD03G1243600.v1.1
prunus_persica Prupe.4G164700_v2.0.a1
pyrus_communis pycom03g19030
rosa_chinensis RchiOBHm_Chr5g0030921
rosa_laevigata RLG00000033272
rosa_multiflora Rmu_sc0001974.1_g000013
rosa_roxburghii Rroxscaffold_1G00049340
rosa_rugosa Rorug05G0121500
rosa_samantha Rh5AG214700 Rh5BG213600 Rh5CG237500 Rh5DG218100
rosa_wichuraiana Rw5G019630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 437, 1610
Acc36I ACCTGC 1 cut(s) 207
AccB1I GGYRCC 2 cut(s) 711, 952
AccII CGCG 3 cut(s) 193, 204, 206
AccIII TCCGGA 1 cut(s) 1237
AciI CCGC 8 cut(s) 79, 181, 191, 193, 258, 724, 1040, 1271
AclWI GGATC 2 cut(s) 959, 972
AcoI YGGCCR 2 cut(s) 214, 265
AcsI RAATTY 6 cut(s) 144, 186, 466, 832, 1426, 1701
AcuI CTGAAG 2 cut(s) 1172, 1512
AfaI GTAC 5 cut(s) 428, 491, 497, 692, 1030
AfeI AGCGCT 1 cut(s) 109
AfiI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1762
AgsI TTSAA 2 cut(s) 632, 1821
AhlI ACTAGT 1 cut(s) 1484
AjuI GAANNNNNNNTTGG 4 cut(s) 782, 814, 1190, 1222
Alw21I GWGCWC 1 cut(s) 408
Alw26I GTCTC 1 cut(s) 255
AlwI GGATC 2 cut(s) 959, 972
Ama87I CYCGRG 2 cut(s) 367, 422
Aor13HI TCCGGA 1 cut(s) 1237
Aor51HI AGCGCT 1 cut(s) 109
AoxI GGCC 6 cut(s) 214, 231, 265, 553, 875, 899
ApeKI GCWGC 3 cut(s) 863, 1478, 1727
ApoI RAATTY 6 cut(s) 144, 186, 466, 832, 1426, 1701
Asp700I GAANNNNTTC 1 cut(s) 1283
AspLEI GCGC 4 cut(s) 110, 204, 206, 474
AspS9I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1670
AsuC2I CCSGG 4 cut(s) 246, 383, 479, 545
AsuHPI GGTGA 8 cut(s) 553, 586, 1075, 1328, 1340, 1406, 1613, 1811
AsuNHI GCTAGC 1 cut(s) 1507
AvaI CYCGRG 2 cut(s) 367, 422
AvaII GGWCC 5 cut(s) 196, 242, 439, 509, 1670
AxyI CCTNAGG 1 cut(s) 927
BaeI ACNNNNGTAYC 2 cut(s) 418, 451
BamHI GGATCC 1 cut(s) 964
BanI GGYRCC 2 cut(s) 711, 952
BanII GRGCYC 2 cut(s) 408, 423
BauI CACGAG 1 cut(s) 517
Bbv12I GWGCWC 1 cut(s) 408
BbvI GCAGC 3 cut(s) 875, 1465, 1739
BccI CCATC 5 cut(s) 811, 1004, 1340, 1592, 1790
BceAI ACGGC 5 cut(s) 143, 280, 514, 724, 940
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 4 cut(s) 246, 383, 479, 545
BcoDI GTCTC 1 cut(s) 255
BcuI ACTAGT 1 cut(s) 1484
BfaI CTAG 5 cut(s) 840, 1131, 1485, 1508, 1779
BfoI RGCGCY 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 207
BisI GCNGC 5 cut(s) 725, 864, 1272, 1479, 1728
BlsI GCNGC 5 cut(s) 726, 865, 1273, 1480, 1729
Bme1390I CCNGG 4 cut(s) 246, 383, 479, 545
Bme18I GGWCC 5 cut(s) 196, 242, 439, 509, 1670
BmeT110I CYCGRG 2 cut(s) 367, 422
BmgT120I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1670
BmiI GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
BmrFI CCNGG 4 cut(s) 246, 383, 479, 545
BmsI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
BmtI GCTAGC 1 cut(s) 1511
BplI GAGNNNNNCTC 4 cut(s) 298, 330, 646, 678
BpmI CTGGAG 2 cut(s) 88, 392
BpuEI CTTGAG 2 cut(s) 80, 344
BpuMI CCSGG 4 cut(s) 246, 383, 479, 545
Bsa29I ATCGAT 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 191, 740, 1673
BsaWI WCCGGW 3 cut(s) 441, 1162, 1237
BsaXI ACNNNNNCTCC 4 cut(s) 1205, 1235, 1451, 1481
Bsc4I CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1762
Bse118I RCCGGY 5 cut(s) 212, 354, 555, 901, 915
Bse21I CCTNAGG 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 1237
BseCI ATCGAT 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 191, 740, 1673
BseLI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1762
BseMII CTCAG 3 cut(s) 774, 941, 1602
BsePI GCGCGC 1 cut(s) 202
BseRI GAGGAG 2 cut(s) 252, 1226
BseX3I CGGCCG 2 cut(s) 214, 265
BseXI GCAGC 3 cut(s) 875, 1465, 1739
BseYI CCCAGC 1 cut(s) 1661
BsgI GTGCAG 1 cut(s) 882
Bsh1236I CGCG 3 cut(s) 193, 204, 206
Bsh1285I CGRYCG 4 cut(s) 217, 268, 433, 1631
BshFI GGCC 6 cut(s) 216, 233, 267, 555, 877, 901
BshNI GGYRCC 2 cut(s) 711, 952
BshVI ATCGAT 1 cut(s) 273
BsiEI CGRYCG 4 cut(s) 217, 268, 433, 1631
BsiHKAI GWGCWC 1 cut(s) 408
BsiHKCI CYCGRG 2 cut(s) 367, 422
BslFI GGGAC 2 cut(s) 146, 209
BslI CCNNNNNNNGG 6 cut(s) 448, 519, 550, 551, 570, 1762
BsmAI GTCTC 1 cut(s) 255
BsmBI CGTCTC 1 cut(s) 255
BsmFI GGGAC 2 cut(s) 146, 209
BsnI GGCC 6 cut(s) 216, 233, 267, 555, 877, 901
BsoBI CYCGRG 2 cut(s) 367, 422
Bsp1286I GDGCHC 2 cut(s) 408, 423
Bsp13I TCCGGA 1 cut(s) 1237
Bsp143I GATC 2 cut(s) 964, 1117
Bsp19I CCATGG 1 cut(s) 1673
BspACI CCGC 8 cut(s) 79, 181, 191, 193, 258, 724, 1040, 1271
BspANI GGCC 6 cut(s) 216, 233, 267, 555, 877, 901
BspCNI CTCAG 3 cut(s) 775, 940, 1601
BspDI ATCGAT 1 cut(s) 273
BspEI TCCGGA 1 cut(s) 1237
BspFNI CGCG 3 cut(s) 193, 204, 206
BspHI TCATGA 1 cut(s) 1614
BspLI GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
BspMI ACCTGC 1 cut(s) 207
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 2 cut(s) 959, 972
BspT107I GGYRCC 2 cut(s) 711, 952
BsrFI RCCGGY 5 cut(s) 212, 354, 555, 901, 915
BssAI RCCGGY 5 cut(s) 212, 354, 555, 901, 915
BssECI CCNNGG 3 cut(s) 191, 740, 1673
BssHII GCGCGC 1 cut(s) 202
BssMI GATC 2 cut(s) 964, 1117
BssSI CACGAG 1 cut(s) 517
BssT1I CCWWGG 1 cut(s) 1673
Bst2BI CACGAG 1 cut(s) 517
Bst4CI ACNGT 3 cut(s) 434, 1612, 1713
Bst6I CTCTTC 7 cut(s) 299, 600, 647, 890, 1383, 1434, 1688
BstC8I GCNNGC 7 cut(s) 204, 214, 316, 336, 1509, 1659, 1725
BstDEI CTNAG 5 cut(s) 5, 783, 927, 1203, 1588
BstDSI CCRYGG 3 cut(s) 191, 740, 1673
BstENI CCTNNNNNAGG 1 cut(s) 1760
BstFNI CGCG 3 cut(s) 193, 204, 206
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 4 cut(s) 110, 204, 206, 474
BstKTI GATC 2 cut(s) 967, 1120
BstMAI GTCTC 1 cut(s) 255
BstMBI GATC 2 cut(s) 964, 1117
BstMCI CGRYCG 4 cut(s) 217, 268, 433, 1631
BstMWI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1487
BstNSI RCATGY 1 cut(s) 1787
BstSCI CCNGG 4 cut(s) 244, 381, 477, 543
BstUI CGCG 3 cut(s) 193, 204, 206
BstV1I GCAGC 3 cut(s) 875, 1465, 1739
BstX2I RGATCY 1 cut(s) 964
BstXI CCANNNNNNTGG 1 cut(s) 416
BstYI RGATCY 1 cut(s) 964
BstZI CGGCCG 2 cut(s) 214, 265
Bsu15I ATCGAT 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 927
BsuRI GGCC 6 cut(s) 216, 233, 267, 555, 877, 901
BsuTUI ATCGAT 1 cut(s) 273
BtgI CCRYGG 3 cut(s) 191, 740, 1673
BtsI GCAGTG 1 cut(s) 755
BtsIMutI CAGTG 2 cut(s) 755, 917
BveI ACCTGC 1 cut(s) 207
Cac8I GCNNGC 7 cut(s) 204, 214, 316, 336, 1509, 1659, 1725
CciI TCATGA 1 cut(s) 1614
CfoI GCGC 4 cut(s) 110, 204, 206, 474
Cfr10I RCCGGY 5 cut(s) 212, 354, 555, 901, 915
Cfr13I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1670
Cfr42I CCGCGG 1 cut(s) 194
ClaI ATCGAT 1 cut(s) 273
Csp6I GTAC 5 cut(s) 427, 490, 496, 691, 1029
CviAII CATG 6 cut(s) 448, 867, 944, 1615, 1674, 1784
CviQI GTAC 5 cut(s) 427, 490, 496, 691, 1029
DdeI CTNAG 5 cut(s) 5, 783, 927, 1203, 1588
DpnI GATC 2 cut(s) 966, 1119
DpnII GATC 2 cut(s) 964, 1117
DraI TTTAAA 1 cut(s) 1471
DrdI GACNNNNNNGTC 2 cut(s) 437, 1610
DseDI GACNNNNNNGTC 2 cut(s) 437, 1610
EaeI YGGCCR 2 cut(s) 214, 265
EagI CGGCCG 2 cut(s) 214, 265
Eam1104I CTCTTC 7 cut(s) 299, 600, 647, 890, 1383, 1434, 1688
EarI CTCTTC 7 cut(s) 299, 600, 647, 890, 1383, 1434, 1688
EciI GGCGGA 2 cut(s) 68, 273
Ecl136II GAGCTC 1 cut(s) 406
EclXI CGGCCG 2 cut(s) 214, 265
Eco130I CCWWGG 1 cut(s) 1673
Eco24I GRGCYC 2 cut(s) 408, 423
Eco47I GGWCC 5 cut(s) 196, 242, 439, 509, 1670
Eco47III AGCGCT 1 cut(s) 109
Eco52I CGGCCG 2 cut(s) 214, 265
Eco53kI GAGCTC 1 cut(s) 406
Eco57I CTGAAG 2 cut(s) 1172, 1512
Eco81I CCTNAGG 1 cut(s) 927
Eco88I CYCGRG 2 cut(s) 367, 422
EcoICRI GAGCTC 1 cut(s) 406
EcoNI CCTNNNNNAGG 1 cut(s) 1760
EcoO109I RGGNCCY 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 1701
EcoT14I CCWWGG 1 cut(s) 1673
EcoT38I GRGCYC 2 cut(s) 408, 423
ErhI CCWWGG 1 cut(s) 1673
Esp3I CGTCTC 1 cut(s) 255
FaeI CATG 6 cut(s) 451, 870, 947, 1618, 1677, 1787
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FaqI GGGAC 2 cut(s) 146, 209
FatI CATG 6 cut(s) 447, 866, 943, 1614, 1673, 1783
FauI CCCGC 3 cut(s) 186, 188, 1033
FbaI TGATCA 1 cut(s) 1117
Fnu4HI GCNGC 5 cut(s) 725, 864, 1272, 1479, 1728
FriOI GRGCYC 2 cut(s) 408, 423
Fsp4HI GCNGC 5 cut(s) 725, 864, 1272, 1479, 1728
FspBI CTAG 5 cut(s) 840, 1131, 1485, 1508, 1779
GlaI GCGC 4 cut(s) 109, 203, 205, 473
GluI GCNGC 5 cut(s) 725, 864, 1272, 1479, 1728
GsaI CCCAGC 1 cut(s) 1665
GsuI CTGGAG 2 cut(s) 88, 392
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 6 cut(s) 216, 233, 267, 555, 877, 901
HhaI GCGC 4 cut(s) 110, 204, 206, 474
Hin1II CATG 6 cut(s) 451, 870, 947, 1618, 1677, 1787
Hin6I GCGC 4 cut(s) 108, 202, 204, 472
HinP1I GCGC 4 cut(s) 108, 202, 204, 472
HincII GTYRAC 1 cut(s) 1735
HindII GTYRAC 1 cut(s) 1735
HindIII AAGCTT 1 cut(s) 1655
HinfI GANTC 6 cut(s) 7, 270, 341, 661, 1066, 1156
HphI GGTGA 8 cut(s) 553, 586, 1075, 1328, 1340, 1406, 1613, 1811
Hpy166II GTNNAC 5 cut(s) 561, 753, 1029, 1287, 1735
Hpy188I TCNGA 8 cut(s) 69, 131, 142, 286, 509, 733, 969, 1071
Hpy188III TCNNGA 9 cut(s) 11, 361, 641, 929, 962, 1121, 1238, 1615, 1793
Hpy8I GTNNAC 5 cut(s) 561, 753, 1029, 1287, 1735
Hpy99I CGWCG 3 cut(s) 536, 539, 569
HpyCH4III ACNGT 3 cut(s) 434, 1612, 1713
HpyCH4V TGCA 4 cut(s) 278, 863, 1177, 1787
HpyF10VI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1487
HpyF3I CTNAG 5 cut(s) 5, 783, 927, 1203, 1588
Hsp92II CATG 6 cut(s) 451, 870, 947, 1618, 1677, 1787
HspAI GCGC 4 cut(s) 108, 202, 204, 472
Kpn2I TCCGGA 1 cut(s) 1237
KroI GCCGGC 1 cut(s) 212
KroNI GCCGGC 1 cut(s) 214
Ksp22I TGATCA 1 cut(s) 1117
KspI CCGCGG 1 cut(s) 194
Kzo9I GATC 2 cut(s) 964, 1117
LmnI GCTCC 8 cut(s) 115, 219, 257, 411, 745, 810, 976, 1240
Lsp1109I GCAGC 3 cut(s) 875, 1465, 1739
LweI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
MaeI CTAG 5 cut(s) 840, 1131, 1485, 1508, 1779
MaeIII GTNAC 2 cut(s) 1316, 1601
MalI GATC 2 cut(s) 966, 1119
MboI GATC 2 cut(s) 964, 1117
MfeI CAATTG 2 cut(s) 665, 1553
MflI RGATCY 1 cut(s) 964
MhlI GDGCHC 2 cut(s) 408, 423
MlyI GAGTC 3 cut(s) 16, 350, 655
MmeI TCCRAC 3 cut(s) 780, 978, 1188
MroI TCCGGA 1 cut(s) 1237
MroNI GCCGGC 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 1283
MseI TTAA 4 cut(s) 1095, 1167, 1470, 1689
MspA1I CMGCKG 1 cut(s) 193
MspR9I CCNGG 4 cut(s) 246, 383, 479, 545
MunI CAATTG 2 cut(s) 665, 1553
MvnI CGCG 3 cut(s) 193, 204, 206
MwoI GCNNNNNNNGC 5 cut(s) 199, 264, 418, 745, 1487
NaeI GCCGGC 1 cut(s) 214
NciI CCSGG 4 cut(s) 246, 383, 479, 545
NcoI CCATGG 1 cut(s) 1673
NdeII GATC 2 cut(s) 964, 1117
NgoMIV GCCGGC 1 cut(s) 212
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 6 cut(s) 451, 870, 947, 1618, 1677, 1787
NlaIV GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
NmeAIII GCCGAG 1 cut(s) 364
NmuCI GTSAC 2 cut(s) 1316, 1601
NspI RCATGY 1 cut(s) 1787
PagI TCATGA 1 cut(s) 1614
PauI GCGCGC 1 cut(s) 202
PcsI WCGNNNNNNNCGW 3 cut(s) 270, 537, 737
PdiI GCCGGC 1 cut(s) 214
PdmI GAANNNNTTC 1 cut(s) 1283
PfeI GAWTC 3 cut(s) 270, 1066, 1156
PflFI GACNNNGTC 1 cut(s) 841
PfoI TCCNGGA 1 cut(s) 244
PkrI GCNGC 5 cut(s) 726, 865, 1273, 1480, 1729
PleI GAGTC 3 cut(s) 15, 349, 655
PpsI GAGTC 3 cut(s) 15, 349, 655
PpuMI RGGWCCY 1 cut(s) 196
Psp124BI GAGCTC 1 cut(s) 408
Psp5II RGGWCCY 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 1661
PspN4I GGNNCC 7 cut(s) 197, 253, 511, 554, 713, 954, 966
PspPI GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1670
PspPPI RGGWCCY 1 cut(s) 196
PsrI GAACNNNNNNTAC 2 cut(s) 488, 520
PsuI RGATCY 1 cut(s) 964
PsyI GACNNNGTC 1 cut(s) 841
PteI GCGCGC 1 cut(s) 202
RsaI GTAC 5 cut(s) 428, 491, 497, 692, 1030
RsaNI GTAC 5 cut(s) 427, 490, 496, 691, 1029
SacI GAGCTC 1 cut(s) 408
SacII CCGCGG 1 cut(s) 194
SaqAI TTAA 4 cut(s) 1095, 1167, 1470, 1689
SatI GCNGC 5 cut(s) 725, 864, 1272, 1479, 1728
Sau3AI GATC 2 cut(s) 964, 1117
Sau96I GGNCC 6 cut(s) 196, 242, 439, 509, 553, 1670
SchI GAGTC 3 cut(s) 16, 350, 655
ScrFI CCNGG 4 cut(s) 246, 383, 479, 545
SduI GDGCHC 2 cut(s) 408, 423
SfaNI GCATC 5 cut(s) 135, 265, 1186, 1222, 1240
Sfr303I CCGCGG 1 cut(s) 194
SgrBI CCGCGG 1 cut(s) 194
SinI GGWCC 5 cut(s) 196, 242, 439, 509, 1670
SmlI CTYRAG 2 cut(s) 95, 359
SmoI CTYRAG 2 cut(s) 95, 359
SpeI ACTAGT 1 cut(s) 1484
SsiI CCGC 8 cut(s) 79, 181, 191, 193, 258, 724, 1040, 1271
SspMI CTAG 5 cut(s) 840, 1131, 1485, 1508, 1779
SstI GAGCTC 1 cut(s) 408
StyD4I CCNGG 4 cut(s) 244, 381, 477, 543
StyI CCWWGG 1 cut(s) 1673
TaaI ACNGT 3 cut(s) 434, 1612, 1713
TaqI TCGA 2 cut(s) 273, 344
TaqII GACCGA 1 cut(s) 1645
TatI WGTACW 1 cut(s) 1028
TauI GCSGC 2 cut(s) 727, 1274
TfiI GAWTC 3 cut(s) 270, 1066, 1156
Tru1I TTAA 4 cut(s) 1095, 1167, 1470, 1689
Tru9I TTAA 4 cut(s) 1095, 1167, 1470, 1689
TscAI CASTG 2 cut(s) 755, 917
TseFI GTSAC 2 cut(s) 1316, 1601
TseI GCWGC 3 cut(s) 863, 1478, 1727
Tsp45I GTSAC 2 cut(s) 1316, 1601
TspDTI ATGAA 3 cut(s) 436, 932, 1590
TspGWI ACGGA 2 cut(s) 989, 1304
TspRI CASTG 2 cut(s) 755, 917
Tth111I GACNNNGTC 1 cut(s) 841
VpaK11BI GGWCC 5 cut(s) 196, 242, 439, 509, 1670
XagI CCTNNNNNAGG 1 cut(s) 1760
XapI RAATTY 6 cut(s) 144, 186, 466, 832, 1426, 1701
XceI RCATGY 1 cut(s) 1787
XmnI GAANNNNTTC 1 cut(s) 1283
XspI CTAG 5 cut(s) 840, 1131, 1485, 1508, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.