FvH4_3g26290

Large subunit GTPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0010426
Physical Location & Seq
Forward (+)
19230387 .. 19234011
3625 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26290.t1

Sequence Viewer

Length: 1758 bp
ATGCCGCCGAAGAACGAGAAGACGAAGCTGGGGAGAGCCCTGGTGCGGCAGCACAACCAGCTGATTCAGCAGACCAAAGAGAAAGGCATCATGTACCGTAAGATGCAGAAGAAGGTTCTAGAATCCGTCACCGAGGTCAGCGACATCGACGCCGTTATCGAACAGGCCGACGAGGCCGACCGCCTCTTCTCCCTCAACAACCCTAACCCCAATCTCCTCATCAATCTGGACGGGAGTGCGATAGCGCCGGAGCAGAGGAGGGAGCAGCAGAGGAAGGAGGAGGCCGTGCACGCCGGTAGTCTCCAGGTGCCACGTAGGCCGCCGTGGACGCCGGAAATGTCGGTGGAGGAGCTCGATGACAACGAGAGGCAGGCCTTCCTTGTGTGGCGGAGAAGCCTCGCGAGGCTTGAGGAGAATGACAAGCTTGTTCTTACTCCTTTTGAGAAGAACTTGGATATCTGGAGGCAGCTTTGGCGTGTCGTTGAGCGTAGCGATTTGCTTGTGATGGTTGTCGATGCCCGGGATCCTCTGTTCTACCGATGCCCTGATCTTGAGGTATATGCACGAGAGGTTGACAAACACAAAAGGACTATGCTTCTTGTTAATAAAGCAGATCTGTTACCTGTATCTGTTAGAGAGAAGTGGGCAAAATATTTCCGTTCCCAAGAGATTCTTTTTGTCTTTTGGTCGGCTAAAGCTGCCTCAGCAGCCATGGAAGGGAAACAACTCAGTTCCCCGTGGAGTACAGATAATTGCCAGCAGAATTCAGAGGACCCTGATACAAAAGTATATGGGAGAGATGAGCTTTTGGCTCGTTTACAGTCCGAGGCAGAAGAGATAGTCAAACGTAGAAGGAACTCGGGATCCAGTGGCACAGGATCATCCAACATCTGTTTGCAAATTGGAAGTGTTTCGCCTTCAGCTAGTGTTGTCGTGGGGTTTGTTGGTTATCCAAATGTTGGGAAAAGCTCGACAATAAATGCATTGGTAGGCCAGAAAAAGACAGGTGTTACCTCCACTCCGGGGAAGACAAAGCATTTCCAAACATTGATCATATCTGATGAGTTGACGCTTTGTGACTGCCCTGGATTAGTGTTTCCATCCTTTTCGAGCTCAAGACATGAGATGATTGCTTGTGGTGTATTGCCAATTGATCGAATGACTGAAAAGAGGGAGGCTGTGCAGGTAGTGGCTGATCGAGTTCCAAGACATGTCATTGAAAAAGTGTACAACATTGATCTGCCAAAACCCAAATCCTATGAATTGCAATCGCGGCCACCTCTGGCAGCTGAGCTTATGAGAGCCTACTGTGCCTCTCGTGGGTATGTTGCCTCAAGTGGACTGCCTGATGAAACCAGAGCTGCCCGTCAATTATTGAGGGACTACATTGATGGGAAGCTGCCTCATTATGAAATGCCCCCTGGAATGACAGATGAAAAAGATGATGTGGGACACATCTTGTCCGAACAGCATGAATCAGATTCATCTGATATGGAAACCCGTTCAGAATCGGATAATGAAAATGTGCCAGAGATTGATCATGTCCTGGATGACCTCAACTCATTTGACATAGCGAATGGGTTGGCTACCAATAAGAAAGCAACCGCGAAGAAGCTCACCGCACCTCATAAACAACACAAGAAGCCTCAGAGGAAAAAGGATCGCACATGGAGGGTAGGAAATGATGGTGGTGACGGAATGCCAGTAGCAAGAGTCTATCAGAAACCAGTGAACACGGGTCCTGTTAAGGTTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000054 GO:0000166 GO:0001882 GO:0001883 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006403 GO:0006405 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010154 GO:0010467 GO:0010646 GO:0010817 GO:0012505 GO:0015030 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016072 GO:0016462 GO:0016604 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022414 GO:0022613 GO:0023051 GO:0031503 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032879 GO:0033036 GO:0033750 GO:0034470 GO:0034613 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042886 GO:0043021 GO:0043022 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045184 GO:0046483 GO:0046626 GO:0046907 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048583 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051049 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0090069 GO:0090070 GO:0090304 GO:0097159 GO:0097367 GO:0099402 GO:1900076 GO:1901265 GO:1901360 GO:1901363 GO:2000012
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

586

Amino Acids

65.93

Weight (kDa)

7.62

Isoelectric Point (pI)

54.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 312 - 378 1.4e-15 50S ribosome-binding GTPase
FeoB_N PF02421 312 - 383 7.7e-06 Ferrous iron transport protein B
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1174
AccB1I GGYRCC 1 cut(s) 307
AccB7I CCANNNNNTGG 1 cut(s) 959
AccII CGCG 3 cut(s) 401, 1273, 1607
AciI CCGC 8 cut(s) 5, 46, 181, 320, 388, 1273, 1605, 1620
AclWI GGATC 6 cut(s) 518, 531, 858, 871, 886, 1668
AcoI YGGCCR 1 cut(s) 1274
AcsI RAATTY 1 cut(s) 763
AcuI CTGAAG 1 cut(s) 903
AcyI GRCGYC 2 cut(s) 150, 329
AfaI GTAC 3 cut(s) 95, 745, 1229
AfiI CCNNNNNNNGG 5 cut(s) 45, 717, 959, 1023, 1320
AflIII ACRYGT 1 cut(s) 1210
AgsI TTSAA 1 cut(s) 1220
AjnI CCWGG 5 cut(s) 39, 303, 1084, 1420, 1545
AloI GAACNNNNNNTCC 4 cut(s) 515, 547, 848, 880
Alw21I GWGCWC 3 cut(s) 291, 354, 1115
Alw26I GTCTC 1 cut(s) 305
Alw44I GTGCAC 1 cut(s) 287
AlwI GGATC 6 cut(s) 518, 531, 858, 871, 886, 1668
Ama87I CYCGRG 2 cut(s) 519, 859
AoxI GGCC 7 cut(s) 165, 174, 282, 317, 372, 991, 1274
ApaLI GTGCAC 1 cut(s) 287
ApeKI GCWGC 8 cut(s) 49, 265, 466, 698, 707, 1286, 1361, 1399
ApoI RAATTY 1 cut(s) 763
Asp700I GAANNNNTTC 1 cut(s) 910
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 2 cut(s) 772, 1739
AsuC2I CCSGG 3 cut(s) 520, 521, 1023
AsuHPI GGTGA 3 cut(s) 121, 1609, 1703
AvaI CYCGRG 2 cut(s) 519, 859
AvaII GGWCC 2 cut(s) 772, 1739
BaeGI GKGCMC 1 cut(s) 291
BaeI ACNNNNGTAYC 2 cut(s) 771, 804
BamHI GGATCC 2 cut(s) 523, 863
BanI GGYRCC 1 cut(s) 307
BanII GRGCYC 3 cut(s) 40, 354, 1115
BauI CACGAG 2 cut(s) 564, 1317
BbsI GAAGAC 2 cut(s) 26, 1034
Bbv12I GWGCWC 3 cut(s) 291, 354, 1115
BbvCI CCTCAGC 1 cut(s) 703
BbvI GCAGC 8 cut(s) 61, 277, 478, 685, 719, 1298, 1348, 1386
BccI CCATC 4 cut(s) 499, 1108, 1385, 1679
BceAI ACGGC 3 cut(s) 137, 269, 307
BciT130I CCWGG 5 cut(s) 41, 305, 1086, 1422, 1547
BclI TGATCA 2 cut(s) 1050, 1537
BcnI CCSGG 3 cut(s) 520, 521, 1023
BcoDI GTCTC 1 cut(s) 305
BfaI CTAG 2 cut(s) 119, 924
BfoI RGCGCY 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 1174
BglI GCCNNNNNGGC 2 cut(s) 173, 316
BglII AGATCT 1 cut(s) 613
BlpI GCTNAGC 1 cut(s) 1290
Bme1390I CCNGG 8 cut(s) 41, 305, 520, 521, 1023, 1086, 1422, 1547
Bme18I GGWCC 2 cut(s) 772, 1739
BmeT110I CYCGRG 2 cut(s) 519, 859
BmgT120I GGNCC 2 cut(s) 772, 1739
BmiI GGNNCC 5 cut(s) 309, 525, 774, 865, 1740
BmrFI CCNGG 8 cut(s) 41, 305, 520, 521, 1023, 1086, 1422, 1547
BmsI GCATC 4 cut(s) 93, 96, 505, 530
BpiI GAAGAC 2 cut(s) 26, 1034
BpmI CTGGAG 2 cut(s) 287, 481
Bpu10I CCTNAGC 1 cut(s) 703
Bpu1102I GCTNAGC 1 cut(s) 1290
BpuEI CTTGAG 4 cut(s) 428, 572, 1099, 1318
BpuMI CCSGG 3 cut(s) 520, 521, 1023
BsaAI YACGTR 1 cut(s) 314
BsaHI GRCGYC 2 cut(s) 150, 329
BsaXI ACNNNNNCTCC 2 cut(s) 1003, 1033
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 717, 959, 1023, 1320
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 3 cut(s) 867, 1703, 1727
BseBI CCWGG 5 cut(s) 41, 305, 1086, 1422, 1547
BseGI GGATG 3 cut(s) 881, 1100, 1555
BseLI CCNNNNNNNGG 5 cut(s) 45, 717, 959, 1023, 1320
BseMII CTCAG 4 cut(s) 717, 742, 1281, 1661
BseNI ACTGG 3 cut(s) 867, 1703, 1727
BseRI GAGGAG 5 cut(s) 206, 271, 293, 362, 425
BseSI GKGCMC 1 cut(s) 291
BseXI GCAGC 8 cut(s) 61, 277, 478, 685, 719, 1298, 1348, 1386
BseYI CCCAGC 1 cut(s) 28
BsgI GTGCAG 1 cut(s) 1202
Bsh1236I CGCG 3 cut(s) 401, 1273, 1607
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 7 cut(s) 167, 176, 284, 319, 374, 993, 1276
BshNI GGYRCC 1 cut(s) 307
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 3 cut(s) 291, 354, 1115
BsiHKCI CYCGRG 2 cut(s) 519, 859
BsiSI CCGG 5 cut(s) 248, 294, 332, 520, 1022
BslFI GGGAC 2 cut(s) 1394, 1464
BslI CCNNNNNNNGG 5 cut(s) 45, 717, 959, 1023, 1320
BsmAI GTCTC 1 cut(s) 305
BsmFI GGGAC 2 cut(s) 1394, 1464
BsmI GAATGC 1 cut(s) 1704
BsnI GGCC 7 cut(s) 167, 176, 284, 319, 374, 993, 1276
BsoBI CYCGRG 2 cut(s) 519, 859
Bsp1286I GDGCHC 4 cut(s) 40, 291, 354, 1115
Bsp1407I TGTACA 1 cut(s) 1227
Bsp1720I GCTNAGC 1 cut(s) 1290
Bsp19I CCATGG 1 cut(s) 711
Bsp68I TCGCGA 1 cut(s) 401
BspACI CCGC 8 cut(s) 5, 46, 181, 320, 388, 1273, 1605, 1620
BspANI GGCC 7 cut(s) 167, 176, 284, 319, 374, 993, 1276
BspCNI CTCAG 4 cut(s) 716, 741, 1282, 1660
BspFNI CGCG 3 cut(s) 401, 1273, 1607
BspLI GGNNCC 5 cut(s) 309, 525, 774, 865, 1740
BspMI ACCTGC 1 cut(s) 1174
BspPI GGATC 6 cut(s) 518, 531, 858, 871, 886, 1668
BspT107I GGYRCC 1 cut(s) 307
BsrFI RCCGGY 1 cut(s) 293
BsrGI TGTACA 1 cut(s) 1227
BsrI ACTGG 3 cut(s) 867, 1703, 1727
BssAI RCCGGY 1 cut(s) 293
BssNI GRCGYC 2 cut(s) 150, 329
BssSI CACGAG 2 cut(s) 564, 1317
BssT1I CCWWGG 1 cut(s) 711
Bst2BI CACGAG 2 cut(s) 564, 1317
Bst2UI CCWGG 5 cut(s) 41, 305, 1086, 1422, 1547
Bst4CI ACNGT 3 cut(s) 98, 822, 1310
Bst6I CTCTTC 2 cut(s) 191, 828
BstACI GRCGYC 2 cut(s) 150, 329
BstAUI TGTACA 1 cut(s) 1227
BstBAI YACGTR 1 cut(s) 314
BstC8I GCNNGC 3 cut(s) 291, 372, 758
BstDEI CTNAG 4 cut(s) 703, 728, 1290, 1647
BstDSI CCRYGG 3 cut(s) 323, 711, 737
BstF5I GGATG 3 cut(s) 881, 1100, 1555
BstFNI CGCG 3 cut(s) 401, 1273, 1607
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 1 cut(s) 247
BstMAI GTCTC 1 cut(s) 305
BstMCI CGRYCG 1 cut(s) 181
BstNI CCWGG 5 cut(s) 41, 305, 1086, 1422, 1547
BstNSI RCATGY 1 cut(s) 1214
BstSCI CCNGG 8 cut(s) 39, 303, 518, 519, 1021, 1084, 1420, 1545
BstSLI GKGCMC 1 cut(s) 291
BstUI CGCG 3 cut(s) 401, 1273, 1607
BstV1I GCAGC 8 cut(s) 61, 277, 478, 685, 719, 1298, 1348, 1386
BstV2I GAAGAC 2 cut(s) 26, 1034
BstX2I RGATCY 3 cut(s) 523, 613, 863
BstYI RGATCY 3 cut(s) 523, 613, 863
BsuRI GGCC 7 cut(s) 167, 176, 284, 319, 374, 993, 1276
BtgI CCRYGG 3 cut(s) 323, 711, 737
BtsCI GGATG 3 cut(s) 881, 1100, 1555
BtsIMutI CAGTG 2 cut(s) 874, 1734
BtuMI TCGCGA 1 cut(s) 401
BveI ACCTGC 1 cut(s) 1174
Cac8I GCNNGC 3 cut(s) 291, 372, 758
CfoI GCGC 1 cut(s) 247
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 2 cut(s) 772, 1739
Cfr9I CCCGGG 1 cut(s) 519
CseI GACGC 3 cut(s) 158, 337, 1078
Csp6I GTAC 3 cut(s) 94, 744, 1228
CviAII CATG 7 cut(s) 91, 712, 1121, 1211, 1472, 1541, 1668
CviQI GTAC 3 cut(s) 94, 744, 1228
DdeI CTNAG 4 cut(s) 703, 728, 1290, 1647
EaeI YGGCCR 1 cut(s) 1274
Eam1104I CTCTTC 2 cut(s) 191, 828
EarI CTCTTC 2 cut(s) 191, 828
EciI GGCGGA 1 cut(s) 403
Ecl136II GAGCTC 2 cut(s) 352, 1113
Eco130I CCWWGG 1 cut(s) 711
Eco147I AGGCCT 1 cut(s) 374
Eco24I GRGCYC 3 cut(s) 40, 354, 1115
Eco32I GATATC 1 cut(s) 457
Eco47I GGWCC 2 cut(s) 772, 1739
Eco53kI GAGCTC 2 cut(s) 352, 1113
Eco57I CTGAAG 1 cut(s) 903
Eco88I CYCGRG 2 cut(s) 519, 859
EcoICRI GAGCTC 2 cut(s) 352, 1113
EcoO109I RGGNCCY 2 cut(s) 772, 1739
EcoRI GAATTC 1 cut(s) 763
EcoRII CCWGG 5 cut(s) 39, 303, 1084, 1420, 1545
EcoRV GATATC 1 cut(s) 457
EcoT14I CCWWGG 1 cut(s) 711
EcoT22I ATGCAT 1 cut(s) 985
EcoT38I GRGCYC 3 cut(s) 40, 354, 1115
ErhI CCWWGG 1 cut(s) 711
FaeI CATG 7 cut(s) 94, 715, 1124, 1214, 1475, 1544, 1671
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FaqI GGGAC 2 cut(s) 1394, 1464
FatI CATG 7 cut(s) 90, 711, 1120, 1210, 1471, 1540, 1667
FbaI TGATCA 2 cut(s) 1050, 1537
FokI GGATG 3 cut(s) 868, 1087, 1562
FriOI GRGCYC 3 cut(s) 40, 354, 1115
FspBI CTAG 2 cut(s) 119, 924
GlaI GCGC 1 cut(s) 246
GsaI CCCAGC 1 cut(s) 32
GsuI CTGGAG 2 cut(s) 287, 481
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 7 cut(s) 167, 176, 284, 319, 374, 993, 1276
HapII CCGG 5 cut(s) 248, 294, 332, 520, 1022
HgaI GACGC 3 cut(s) 158, 337, 1078
HhaI GCGC 1 cut(s) 247
Hin1I GRCGYC 2 cut(s) 150, 329
Hin1II CATG 7 cut(s) 94, 715, 1124, 1214, 1475, 1544, 1671
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HincII GTYRAC 2 cut(s) 574, 1068
HindII GTYRAC 2 cut(s) 574, 1068
HindIII AAGCTT 1 cut(s) 422
HinfI GANTC 7 cut(s) 64, 122, 670, 1475, 1481, 1508, 1713
HpaII CCGG 5 cut(s) 248, 294, 332, 520, 1022
HphI GGTGA 3 cut(s) 121, 1609, 1703
Hpy166II GTNNAC 8 cut(s) 289, 327, 574, 818, 1068, 1228, 1340, 1732
Hpy188III TCNNGA 7 cut(s) 119, 227, 400, 460, 551, 861, 1116
Hpy8I GTNNAC 8 cut(s) 289, 327, 574, 818, 1068, 1228, 1340, 1732
Hpy99I CGWCG 2 cut(s) 152, 173
HpyAV CCTTC 6 cut(s) 106, 268, 385, 710, 846, 927
HpyCH4III ACNGT 3 cut(s) 98, 822, 1310
HpyCH4IV ACGT 2 cut(s) 313, 847
HpyCH4V TGCA 7 cut(s) 106, 289, 563, 898, 983, 1183, 1267
HpyF3I CTNAG 4 cut(s) 703, 728, 1290, 1647
HpySE526I ACGT 2 cut(s) 313, 847
Hsp92I GRCGYC 2 cut(s) 150, 329
Hsp92II CATG 7 cut(s) 94, 715, 1124, 1214, 1475, 1544, 1671
HspAI GCGC 1 cut(s) 245
Ksp22I TGATCA 2 cut(s) 1050, 1537
LmnI GCTCC 3 cut(s) 250, 262, 349
Lsp1109I GCAGC 8 cut(s) 61, 277, 478, 685, 719, 1298, 1348, 1386
LweI GCATC 4 cut(s) 93, 96, 505, 530
MaeI CTAG 2 cut(s) 119, 924
MaeII ACGT 2 cut(s) 313, 847
MaeIII GTNAC 5 cut(s) 127, 618, 1009, 1076, 1691
MboII GAAGA 8 cut(s) 22, 31, 121, 178, 457, 845, 1039, 1621
MfeI CAATTG 1 cut(s) 1149
MflI RGATCY 3 cut(s) 523, 613, 863
MhlI GDGCHC 4 cut(s) 40, 291, 354, 1115
MluCI AATT 6 cut(s) 751, 763, 900, 1149, 1262, 1370
MlyI GAGTC 1 cut(s) 1722
MmeI TCCRAC 2 cut(s) 909, 1732
Mph1103I ATGCAT 1 cut(s) 985
MroXI GAANNNNTTC 1 cut(s) 910
MseI TTAA 2 cut(s) 603, 1746
MspA1I CMGCKG 2 cut(s) 61, 1289
MspI CCGG 5 cut(s) 248, 294, 332, 520, 1022
MspR9I CCNGG 8 cut(s) 41, 305, 520, 521, 1023, 1086, 1422, 1547
MunI CAATTG 1 cut(s) 1149
Mva1269I GAATGC 1 cut(s) 1704
MvaI CCWGG 5 cut(s) 41, 305, 1086, 1422, 1547
MvnI CGCG 3 cut(s) 401, 1273, 1607
NciI CCSGG 3 cut(s) 520, 521, 1023
NcoI CCATGG 1 cut(s) 711
NlaIII CATG 7 cut(s) 94, 715, 1124, 1214, 1475, 1544, 1671
NlaIV GGNNCC 5 cut(s) 309, 525, 774, 865, 1740
NmuCI GTSAC 3 cut(s) 127, 1076, 1691
NruI TCGCGA 1 cut(s) 401
NsiI ATGCAT 1 cut(s) 985
NspI RCATGY 1 cut(s) 1214
PceI AGGCCT 1 cut(s) 374
PciI ACATGT 1 cut(s) 1210
PcsI WCGNNNNNNNCGW 3 cut(s) 156, 165, 360
PctI GAATGC 1 cut(s) 1704
PdmI GAANNNNTTC 1 cut(s) 910
PfeI GAWTC 6 cut(s) 64, 122, 670, 1475, 1481, 1508
PflMI CCANNNNNTGG 1 cut(s) 959
PfoI TCCNGGA 1 cut(s) 1545
PleI GAGTC 1 cut(s) 1721
PpsI GAGTC 1 cut(s) 1721
Ppu21I YACGTR 1 cut(s) 314
PpuMI RGGWCCY 2 cut(s) 772, 1739
PscI ACATGT 1 cut(s) 1210
Psp124BI GAGCTC 2 cut(s) 354, 1115
Psp5II RGGWCCY 2 cut(s) 772, 1739
Psp6I CCWGG 5 cut(s) 39, 303, 1084, 1420, 1545
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 5 cut(s) 39, 303, 1084, 1420, 1545
PspN4I GGNNCC 5 cut(s) 309, 525, 774, 865, 1740
PspPI GGNCC 2 cut(s) 772, 1739
PspPPI RGGWCCY 2 cut(s) 772, 1739
PsuI RGATCY 3 cut(s) 523, 613, 863
PvuII CAGCTG 2 cut(s) 61, 1289
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 3 cut(s) 95, 745, 1229
RsaNI GTAC 3 cut(s) 94, 744, 1228
SacI GAGCTC 2 cut(s) 354, 1115
SaqAI TTAA 2 cut(s) 603, 1746
Sau96I GGNCC 2 cut(s) 772, 1739
SchI GAGTC 1 cut(s) 1722
ScrFI CCNGG 8 cut(s) 41, 305, 520, 521, 1023, 1086, 1422, 1547
SduI GDGCHC 4 cut(s) 40, 291, 354, 1115
SfaNI GCATC 4 cut(s) 93, 96, 505, 530
SfiI GGCCNNNNNGGCC 1 cut(s) 173
SinI GGWCC 2 cut(s) 772, 1739
SmaI CCCGGG 1 cut(s) 521
SmlI CTYRAG 4 cut(s) 407, 551, 1114, 1333
SmoI CTYRAG 4 cut(s) 407, 551, 1114, 1333
Sse9I AATT 6 cut(s) 751, 763, 900, 1149, 1262, 1370
SseBI AGGCCT 1 cut(s) 374
SsiI CCGC 8 cut(s) 5, 46, 181, 320, 388, 1273, 1605, 1620
SspI AATATT 1 cut(s) 653
SspMI CTAG 2 cut(s) 119, 924
SstI GAGCTC 2 cut(s) 354, 1115
StuI AGGCCT 1 cut(s) 374
StyD4I CCNGG 8 cut(s) 39, 303, 518, 519, 1021, 1084, 1420, 1545
StyI CCWWGG 1 cut(s) 711
TaaI ACNGT 3 cut(s) 98, 822, 1310
TaiI ACGT 2 cut(s) 316, 850
TaqI TCGA 8 cut(s) 147, 159, 354, 513, 971, 1109, 1156, 1198
TasI AATT 6 cut(s) 751, 763, 900, 1149, 1262, 1370
TatI WGTACW 2 cut(s) 743, 1227
TauI GCSGC 4 cut(s) 7, 49, 322, 1276
TfiI GAWTC 6 cut(s) 64, 122, 670, 1475, 1481, 1508
Tru1I TTAA 2 cut(s) 603, 1746
Tru9I TTAA 2 cut(s) 603, 1746
TscAI CASTG 2 cut(s) 874, 1734
TseFI GTSAC 3 cut(s) 127, 1076, 1691
TseI GCWGC 8 cut(s) 49, 265, 466, 698, 707, 1286, 1361, 1399
Tsp45I GTSAC 3 cut(s) 127, 1076, 1691
TspDTI ATGAA 7 cut(s) 1275, 1365, 1425, 1449, 1473, 1488, 1533
TspGWI ACGGA 3 cut(s) 115, 647, 1710
TspMI CCCGGG 1 cut(s) 519
TspRI CASTG 2 cut(s) 874, 1734
Van91I CCANNNNNTGG 1 cut(s) 959
VneI GTGCAC 1 cut(s) 287
VpaK11BI GGWCC 2 cut(s) 772, 1739
XapI RAATTY 1 cut(s) 763
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 1 cut(s) 1214
XmaI CCCGGG 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 910
XspI CTAG 2 cut(s) 119, 924
Zsp2I ATGCAT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.