Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001942

Physical Location & Seq

Genomic Coordinates Forward (+)

25585980 .. 25590193

Gene Structure 4214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0240700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCGGGGTATAGGCCTATTTCAATTGAGGACTTGCCGACACATTTGGTTTTAGAAATCTTGTGCTCCGGGAGGCTCAGTGCCGTTGATCTTTTGCATTTAGAGTCGACTTCTAGGACATTCGGAGGGAGTCAGGGGTTGTATCCTCACAAGTTTCGGTCATTGGTGGATTATGCCGCGTTTCAGCTGTGTATTTCCCATTCTGTATATGCTAAAATGGAAGAGAATGCTCAGACAGTGCTGTCTGAGCGGTGCGGTGGCAAGTGGAAGAGGATTTTGAGGTTCTTGCAATCCGTGGAGCAATCGTCTGACATGGTGGAGACTTCAGCAGGCAATATGCATATTACCACTGGAAGGTATCACACTCTGCTAATAAGCAATTCATCAGTCTACTCGTGTGGTTCCAGCTTATGTGGTGTTCTTGGCCAAGGTCCTGAGACTAAACTATGTGTGACATTTACCCGGATTAGTTTTCCATCTCCAGCACATGTGGTCCAAGTCTCAGCCTCCCACAACCATGCTGCTTTTGTTATGCAATCTGGAGAGGTTTTCACATGTGGGGACAATTCGTCATTTTGTTGTGGGCATAAAGATACAAACCGGCCAATATTTAGGCCTAGGCTCGTAGAGGCAATGAAGGGAATTCCTTGCAAGCAGGTTGTTGCAGGGCTTAATTTTACAGCTTTCCTTACAAGACAAGGCCATGTTTATACATGTGGGGCCAATACACATGGACAACTCGGTCATGGAGACACCACAGATAGCCCAACTCCCAAAATTATTGAATTTCTCAAGCAAATTGGCTCCATAATTCAGATTGCTGCTGGTCCAAGTTACGTCTTAGCTGTAACTGACAACGGAGTAGTCTACTCTTTTGGGTCAGGTTCTAATTTATGTCTCGGCCATGGAGAGCAGCATGATGAGTTCCAACCACGTGCAATCCAATCATTTAGAAGGAAGGGTATTCATGTAGTTCGAGTCTCTGCAGGTGACGAGCATGCAGTGGCACTTGATTCCAGTGGATTTGTATATACCTGGGGTAAAGGGTACTGTGGTGCATTAGGCCATGGGGATGAGATTGACAAGACTACCCCGGAACTCTTGAGCAGAGTTCAAAGCCAGCTGGCCGTGCAGGTGTGTGCAAGAAAACGGAAGACCTTTGTTCTAATGGATAATGGTTTAGTATATGGTTGTGGTTGGATGGGGTTTGGTAGCCTTGGGTTTACAGACAGGGGACTATCTGACAAAATCTTGAGCCCTCGCATCCTTGATAGCTTAAGACCTCATCATGTTTCTCAGATTAGCACTGGGCTGTACCATACTGTTGCTATCACCAACTCTGGACAACTCTTTGGATTTGGAGATAATGAAAGAGCACAACTTGGGCACGATACACTGAGAGCATGCCTCAAACCAACTGAAATTTTTATAGCAGAAATGACTGATGAGGTGAATCTTGTTTCAGAAAACCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

491

Amino Acids

53.4

Weight (kDa)

7.06

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_RLD	PF25390	113 - 318	4.7e-44	RCC1-like domain
RCC1_2	PF13540	164 - 191	5e-06	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	180 - 230	1.4e-07	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	218 - 246	1.3e-08	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	233 - 283	3.7e-13	Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD	PF25384	284 - 484	4.5e-09	Alsin RCC1-like domain
RCC1	PF00415	286 - 337	2.4e-12	Regulator of chromosome condensation (RCC1) repeat
WD40_RLD	PF25390	311 - 475	1.2e-32	RCC1-like domain
RCC1_2	PF13540	324 - 352	8.9e-07	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	341 - 381	2.4e-06	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	431 - 460	7.2e-08	Regulator of chromosome condensation (RCC1) repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001942)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0005767.1_g000020
rosa_rugosa	Rorug01G0066000 Rorug02G0124200 Rorug02G0138200 Rorug02G0185600 Rorug02G0257700 Rorug02G0261400 Rorug02G0270200 Rorug02G0288300 Rorug02G0292400 Rorug03G0123000 Rorug03G0264500 Rorug03G0272400 Rorug03G0276800 Rorug03G0295500 Rorug03G0345600 Rorug03G0355500 Rorug03G0362800.1 Rorug04G0050800 Rorug04G0062200 Rorug04G0099000 Rorug04G0134600 Rorug04G0136800 Rorug04G0142900 Rorug05G0138800 Rorug05G0173900 Rorug05G0221000 Rorug05G0240700 Rorug05G0243200 Rorug05G0246000 Rorug05G0256000.1 Rorug05G0261900 Rorug05G0268700 Rorug05G0317800 Rorug05G0451600 Rorug05G0539600 Rorug05G0539900 Rorug06G0016600 Rorug06G0053900 Rorug06G0065100 Rorug06G0079600 Rorug06G0093200 Rorug06G0243100 Rorug07G0151000.1 Rorug07G0190200 Rorug07G0286200

Species

Orthologous Gene IDs

rosa_multiflora

Rmu_sc0005767.1_g000020

rosa_rugosa

Rorug01G0066000 Rorug02G0124200 Rorug02G0138200 Rorug02G0185600 Rorug02G0257700 Rorug02G0261400 Rorug02G0270200 Rorug02G0288300 Rorug02G0292400 Rorug03G0123000 Rorug03G0264500 Rorug03G0272400 Rorug03G0276800 Rorug03G0295500 Rorug03G0345600 Rorug03G0355500 Rorug03G0362800.1 Rorug04G0050800 Rorug04G0062200 Rorug04G0099000 Rorug04G0134600 Rorug04G0136800 Rorug04G0142900 Rorug05G0138800 Rorug05G0173900 Rorug05G0221000 Rorug05G0240700 Rorug05G0243200 Rorug05G0246000 Rorug05G0256000.1 Rorug05G0261900 Rorug05G0268700 Rorug05G0317800 Rorug05G0451600 Rorug05G0539600 Rorug05G0539900 Rorug06G0016600 Rorug06G0053900 Rorug06G0065100 Rorug06G0079600 Rorug06G0093200 Rorug06G0243100 Rorug07G0151000.1 Rorug07G0190200 Rorug07G0286200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	977, 1123
AasI	GACNNNNNNGTC	2 cut(s)	241, 741
Acc36I	ACCTGC	3 cut(s)	646, 977, 1123
AccBSI	CCGCTC	1 cut(s)	250
AccI	GTMKAC	3 cut(s)	107, 390, 867
AccII	CGCG	1 cut(s)	179
AciI	CCGC	4 cut(s)	5, 177, 250, 255
AcoI	YGGCCR	4 cut(s)	424, 602, 901, 1125
AcsI	RAATTY	3 cut(s)	642, 785, 1422
AcuI	CTGAAG	1 cut(s)	309
AcvI	CACGTG	1 cut(s)	935
AfaI	GTAC	2 cut(s)	1049, 1316
AfiI	CCNNNNNNNGG	1 cut(s)	354
AflII	CTTAAG	1 cut(s)	1276
AflIII	ACRYGT	3 cut(s)	487, 554, 713
AgsI	TTSAA	3 cut(s)	24, 785, 1115
AhdI	GACNNNNNGTC	1 cut(s)	568
AjnI	CCWGG	1 cut(s)	1034
AluBI	AGCT	6 cut(s)	187, 408, 683, 845, 1123, 1275
AluI	AGCT	6 cut(s)	187, 408, 683, 845, 1123, 1275
Alw21I	GWGCWC	2 cut(s)	68, 1378
Alw26I	GTCTC	6 cut(s)	314, 431, 505, 744, 902, 985
AoxI	GGCC	9 cut(s)	14, 424, 602, 614, 700, 720, 901, 1063, 1125
ApeKI	GCWGC	3 cut(s)	521, 821, 913
ApoI	RAATTY	3 cut(s)	642, 785, 1422
AspA2I	CCTAGG	1 cut(s)	617
AspS9I	GGNCC	4 cut(s)	431, 493, 720, 827
AsuC2I	CCSGG	3 cut(s)	70, 463, 1094
AsuHPI	GGTGA	3 cut(s)	1001, 1324, 1462
AvaII	GGWCC	3 cut(s)	431, 493, 827
AvrII	CCTAGG	1 cut(s)	617
BaeGI	GKGCMC	1 cut(s)	1389
BaeI	ACNNNNGTAYC	2 cut(s)	1039, 1072
BalI	TGGCCA	1 cut(s)	426
BanII	GRGCYC	1 cut(s)	1259
BauI	CACGAG	1 cut(s)	394
BbrPI	CACGTG	1 cut(s)	935
BbsI	GAAGAC	1 cut(s)	1160
Bbv12I	GWGCWC	2 cut(s)	68, 1378
BbvI	GCAGC	3 cut(s)	508, 808, 925
BccI	CCATC	2 cut(s)	484, 1195
BceAI	ACGGC	2 cut(s)	68, 1112
BciT130I	CCWGG	1 cut(s)	1036
BciVI	GTATCC	1 cut(s)	153
BcnI	CCSGG	3 cut(s)	70, 463, 1094
BcoDI	GTCTC	6 cut(s)	314, 431, 505, 744, 902, 985
BfaI	CTAG	2 cut(s)	114, 618
BfmI	CTRYAG	1 cut(s)	984
BfrI	CTTAAG	1 cut(s)	1276
BfuAI	ACCTGC	3 cut(s)	646, 977, 1123
BfuI	GTATCC	1 cut(s)	153
BisI	GCNGC	4 cut(s)	177, 522, 822, 914
BlnI	CCTAGG	1 cut(s)	617
BlsI	GCNGC	4 cut(s)	178, 523, 823, 915
Bme1390I	CCNGG	4 cut(s)	70, 463, 1036, 1094
Bme18I	GGWCC	3 cut(s)	431, 493, 827
BmeRI	GACNNNNNGTC	1 cut(s)	568
BmgT120I	GGNCC	4 cut(s)	431, 493, 720, 827
BmiI	GGNNCC	3 cut(s)	403, 721, 805
BmrFI	CCNGG	4 cut(s)	70, 463, 1036, 1094
BmrI	ACTGGG	1 cut(s)	1317
BmsI	GCATC	1 cut(s)	1272
BmuI	ACTGGG	1 cut(s)	1317
BpiI	GAAGAC	1 cut(s)	1160
BplI	GAGNNNNNCTC	2 cut(s)	1392, 1424
BpmI	CTGGAG	2 cut(s)	465, 561
BpuEI	CTTGAG	3 cut(s)	776, 1123, 1273
BpuMI	CCSGG	3 cut(s)	70, 463, 1094
BsaAI	YACGTR	1 cut(s)	935
BsaJI	CCNNGG	8 cut(s)	294, 427, 617, 904, 1035, 1066, 1092, 1216
BsaXI	ACNNNNNCTCC	4 cut(s)	64, 94, 290, 320
Bsc4I	CCNNNNNNNGG	1 cut(s)	354
Bse118I	RCCGGY	1 cut(s)	600
Bse1I	ACTGG	3 cut(s)	355, 1017, 1312
Bse3DI	GCAATG	1 cut(s)	639
BseBI	CCWGG	1 cut(s)	1036
BseDI	CCNNGG	8 cut(s)	294, 427, 617, 904, 1035, 1066, 1092, 1216
BseGI	GGATG	3 cut(s)	1078, 1206, 1263
BseLI	CCNNNNNNNGG	1 cut(s)	354
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	7 cut(s)	91, 237, 245, 426, 516, 1310, 1388
BseNI	ACTGG	3 cut(s)	355, 1017, 1312
BseSI	GKGCMC	1 cut(s)	1389
BseXI	GCAGC	3 cut(s)	508, 808, 925
BsgI	GTGCAG	1 cut(s)	1151
Bsh1236I	CGCG	1 cut(s)	179
BshFI	GGCC	9 cut(s)	16, 426, 604, 616, 702, 722, 903, 1065, 1127
BsiHKAI	GWGCWC	2 cut(s)	68, 1378
BsiSI	CCGG	4 cut(s)	69, 463, 601, 1094
BslFI	GGGAC	2 cut(s)	575, 1248
BslI	CCNNNNNNNGG	1 cut(s)	354
BsmAI	GTCTC	6 cut(s)	314, 431, 505, 744, 902, 985
BsmFI	GGGAC	2 cut(s)	575, 1248
BsmI	GAATGC	1 cut(s)	232
BsnI	GGCC	9 cut(s)	16, 426, 604, 616, 702, 722, 903, 1065, 1127
Bsp1286I	GDGCHC	4 cut(s)	68, 1259, 1378, 1389
Bsp143I	GATC	1 cut(s)	88
Bsp19I	CCATGG	2 cut(s)	904, 1066
BspACI	CCGC	4 cut(s)	5, 177, 250, 255
BspANI	GGCC	9 cut(s)	16, 426, 604, 616, 702, 722, 903, 1065, 1127
BspCNI	CTCAG	7 cut(s)	90, 238, 244, 427, 515, 1309, 1389
BspFNI	CGCG	1 cut(s)	179
BspLI	GGNNCC	3 cut(s)	403, 721, 805
BspMAI	CTGCAG	1 cut(s)	988
BspMI	ACCTGC	3 cut(s)	646, 977, 1123
BspTI	CTTAAG	1 cut(s)	1276
BsrBI	CCGCTC	1 cut(s)	250
BsrDI	GCAATG	1 cut(s)	639
BsrFI	RCCGGY	1 cut(s)	600
BsrI	ACTGG	3 cut(s)	355, 1017, 1312
BssAI	RCCGGY	1 cut(s)	600
BssECI	CCNNGG	8 cut(s)	294, 427, 617, 904, 1035, 1066, 1092, 1216
BssMI	GATC	1 cut(s)	88
BssSI	CACGAG	1 cut(s)	394
BssT1I	CCWWGG	5 cut(s)	427, 617, 904, 1066, 1216
Bst2BI	CACGAG	1 cut(s)	394
Bst2UI	CCWGG	1 cut(s)	1036
Bst4CI	ACNGT	3 cut(s)	238, 1052, 1324
Bst6I	CTCTTC	2 cut(s)	216, 263
BstAFI	CTTAAG	1 cut(s)	1276
BstBAI	YACGTR	1 cut(s)	935
BstC8I	GCNNGC	6 cut(s)	331, 653, 999, 1121, 1125, 1405
BstDEI	CTNAG	8 cut(s)	77, 231, 246, 435, 502, 841, 1296, 1397
BstDSI	CCRYGG	3 cut(s)	294, 904, 1066
BstF5I	GGATG	3 cut(s)	1078, 1206, 1263
BstFNI	CGCG	1 cut(s)	179
BstKTI	GATC	1 cut(s)	91
BstMAI	GTCTC	6 cut(s)	314, 431, 505, 744, 902, 985
BstMBI	GATC	1 cut(s)	88
BstMWI	GCNNNNNNNGC	2 cut(s)	247, 1129
BstNI	CCWGG	1 cut(s)	1036
BstNSI	RCATGY	5 cut(s)	491, 558, 717, 1001, 1407
BstSCI	CCNGG	4 cut(s)	68, 461, 1034, 1092
BstSFI	CTRYAG	1 cut(s)	984
BstSLI	GKGCMC	1 cut(s)	1389
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	3 cut(s)	508, 808, 925
BstV2I	GAAGAC	1 cut(s)	1160
BsuI	GTATCC	1 cut(s)	153
BsuRI	GGCC	9 cut(s)	16, 426, 604, 616, 702, 722, 903, 1065, 1127
BtgI	CCRYGG	3 cut(s)	294, 904, 1066
BtsCI	GGATG	3 cut(s)	1078, 1206, 1263
BtsI	GCAGTG	1 cut(s)	1008
BtsIMutI	CAGTG	7 cut(s)	85, 243, 348, 1008, 1024, 1305, 1394
BveI	ACCTGC	3 cut(s)	646, 977, 1123
Cac8I	GCNNGC	6 cut(s)	331, 653, 999, 1121, 1125, 1405
Cfr10I	RCCGGY	1 cut(s)	600
Cfr13I	GGNCC	4 cut(s)	431, 493, 720, 827
Csp6I	GTAC	2 cut(s)	1048, 1315
CviQI	GTAC	2 cut(s)	1048, 1315
DdeI	CTNAG	8 cut(s)	77, 231, 246, 435, 502, 841, 1296, 1397
DpnI	GATC	1 cut(s)	90
DpnII	GATC	1 cut(s)	88
DrdI	GACNNNNNNGTC	2 cut(s)	241, 741
DriI	GACNNNNNGTC	1 cut(s)	568
DseDI	GACNNNNNNGTC	2 cut(s)	241, 741
EaeI	YGGCCR	4 cut(s)	424, 602, 901, 1125
Eam1104I	CTCTTC	2 cut(s)	216, 263
Eam1105I	GACNNNNNGTC	1 cut(s)	568
EarI	CTCTTC	2 cut(s)	216, 263
Eco130I	CCWWGG	5 cut(s)	427, 617, 904, 1066, 1216
Eco147I	AGGCCT	2 cut(s)	16, 616
Eco24I	GRGCYC	1 cut(s)	1259
Eco47I	GGWCC	3 cut(s)	431, 493, 827
Eco57I	CTGAAG	1 cut(s)	309
Eco72I	CACGTG	1 cut(s)	935
EcoO109I	RGGNCCY	1 cut(s)	431
EcoRI	GAATTC	1 cut(s)	642
EcoRII	CCWGG	1 cut(s)	1034
EcoT14I	CCWWGG	5 cut(s)	427, 617, 904, 1066, 1216
EcoT22I	ATGCAT	1 cut(s)	342
EcoT38I	GRGCYC	1 cut(s)	1259
ErhI	CCWWGG	5 cut(s)	427, 617, 904, 1066, 1216
FaqI	GGGAC	2 cut(s)	575, 1248
FblI	GTMKAC	3 cut(s)	107, 390, 867
Fnu4HI	GCNGC	4 cut(s)	177, 522, 822, 914
FokI	GGATG	3 cut(s)	1085, 1213, 1250
FriOI	GRGCYC	1 cut(s)	1259
Fsp4HI	GCNGC	4 cut(s)	177, 522, 822, 914
FspBI	CTAG	2 cut(s)	114, 618
GluI	GCNGC	4 cut(s)	177, 522, 822, 914
GsuI	CTGGAG	2 cut(s)	465, 561
HaeIII	GGCC	9 cut(s)	16, 426, 604, 616, 702, 722, 903, 1065, 1127
HapII	CCGG	4 cut(s)	69, 463, 601, 1094
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HinfI	GANTC	5 cut(s)	104, 130, 978, 1013, 1453
HpaII	CCGG	4 cut(s)	69, 463, 601, 1094
HphI	GGTGA	3 cut(s)	1001, 1324, 1462
Hpy166II	GTNNAC	4 cut(s)	108, 391, 868, 1224
Hpy188I	TCNGA	9 cut(s)	125, 234, 247, 310, 816, 1243, 1299, 1465, 1475
Hpy188III	TCNNGA	5 cut(s)	434, 540, 1102, 1252, 1341
Hpy8I	GTNNAC	4 cut(s)	108, 391, 868, 1224
HpyAV	CCTTC	4 cut(s)	348, 631, 948, 952
HpyCH4III	ACNGT	3 cut(s)	238, 1052, 1324
HpyCH4IV	ACGT	2 cut(s)	837, 934
HpyF10VI	GCNNNNNNNGC	2 cut(s)	247, 1129
HpyF3I	CTNAG	8 cut(s)	77, 231, 246, 435, 502, 841, 1296, 1397
HpySE526I	ACGT	2 cut(s)	837, 934
Kzo9I	GATC	1 cut(s)	88
LmnI	GCTCC	3 cut(s)	71, 298, 809
Lsp1109I	GCAGC	3 cut(s)	508, 808, 925
LweI	GCATC	1 cut(s)	1272
MaeI	CTAG	2 cut(s)	114, 618
MaeII	ACGT	2 cut(s)	837, 934
MaeIII	GTNAC	4 cut(s)	451, 833, 847, 989
MalI	GATC	1 cut(s)	90
MbiI	CCGCTC	1 cut(s)	250
MboI	GATC	1 cut(s)	88
MboII	GAAGA	3 cut(s)	233, 280, 1165
MfeI	CAATTG	1 cut(s)	24
MhlI	GDGCHC	4 cut(s)	68, 1259, 1378, 1389
MlsI	TGGCCA	1 cut(s)	426
MluNI	TGGCCA	1 cut(s)	426
MlyI	GAGTC	3 cut(s)	113, 139, 987
MmeI	TCCRAC	2 cut(s)	952, 1178
Mox20I	TGGCCA	1 cut(s)	426
Mph1103I	ATGCAT	1 cut(s)	342
MscI	TGGCCA	1 cut(s)	426
MseI	TTAA	2 cut(s)	672, 1277
MslI	CAYNNNNRTG	2 cut(s)	516, 1071
Msp20I	TGGCCA	1 cut(s)	426
MspA1I	CMGCKG	2 cut(s)	187, 1123
MspCI	CTTAAG	1 cut(s)	1276
MspI	CCGG	4 cut(s)	69, 463, 601, 1094
MspR9I	CCNGG	4 cut(s)	70, 463, 1036, 1094
MunI	CAATTG	1 cut(s)	24
Mva1269I	GAATGC	1 cut(s)	232
MvaI	CCWGG	1 cut(s)	1036
MvnI	CGCG	1 cut(s)	179
MwoI	GCNNNNNNNGC	2 cut(s)	247, 1129
NciI	CCSGG	3 cut(s)	70, 463, 1094
NcoI	CCATGG	2 cut(s)	904, 1066
NdeII	GATC	1 cut(s)	88
NlaIV	GGNNCC	3 cut(s)	403, 721, 805
NmeAIII	GCCGAG	1 cut(s)	879
NmuCI	GTSAC	2 cut(s)	451, 989
NsiI	ATGCAT	1 cut(s)	342
NspI	RCATGY	5 cut(s)	491, 558, 717, 1001, 1407
PaeI	GCATGC	2 cut(s)	1001, 1407
PaqCI	CACCTGC	2 cut(s)	977, 1123
PceI	AGGCCT	2 cut(s)	16, 616
PciI	ACATGT	3 cut(s)	487, 554, 713
PctI	GAATGC	1 cut(s)	232
PfeI	GAWTC	2 cut(s)	1013, 1453
PfoI	TCCNGGA	1 cut(s)	68
PkrI	GCNGC	4 cut(s)	178, 523, 823, 915
PleI	GAGTC	3 cut(s)	112, 138, 986
PmaCI	CACGTG	1 cut(s)	935
PmlI	CACGTG	1 cut(s)	935
PpsI	GAGTC	3 cut(s)	112, 138, 986
Ppu21I	YACGTR	1 cut(s)	935
PpuMI	RGGWCCY	1 cut(s)	431
PscI	ACATGT	3 cut(s)	487, 554, 713
Psp5II	RGGWCCY	1 cut(s)	431
Psp6I	CCWGG	1 cut(s)	1034
PspCI	CACGTG	1 cut(s)	935
PspGI	CCWGG	1 cut(s)	1034
PspN4I	GGNNCC	3 cut(s)	403, 721, 805
PspPI	GGNCC	4 cut(s)	431, 493, 720, 827
PspPPI	RGGWCCY	1 cut(s)	431
PstI	CTGCAG	1 cut(s)	988
PvuII	CAGCTG	2 cut(s)	187, 1123
RsaI	GTAC	2 cut(s)	1049, 1316
RsaNI	GTAC	2 cut(s)	1048, 1315
RseI	CAYNNNNRTG	2 cut(s)	516, 1071
SalI	GTCGAC	1 cut(s)	106
SaqAI	TTAA	2 cut(s)	672, 1277
SatI	GCNGC	4 cut(s)	177, 522, 822, 914
Sau3AI	GATC	1 cut(s)	88
Sau96I	GGNCC	4 cut(s)	431, 493, 720, 827
SchI	GAGTC	3 cut(s)	113, 139, 987
ScrFI	CCNGG	4 cut(s)	70, 463, 1036, 1094
SduI	GDGCHC	4 cut(s)	68, 1259, 1378, 1389
SfaNI	GCATC	1 cut(s)	1272
SfcI	CTRYAG	1 cut(s)	984
SinI	GGWCC	3 cut(s)	431, 493, 827
SmiMI	CAYNNNNRTG	2 cut(s)	516, 1071
SmlI	CTYRAG	4 cut(s)	791, 1102, 1252, 1276
SmoI	CTYRAG	4 cut(s)	791, 1102, 1252, 1276
SphI	GCATGC	2 cut(s)	1001, 1407
SseBI	AGGCCT	2 cut(s)	16, 616
SsiI	CCGC	4 cut(s)	5, 177, 250, 255
SspI	AATATT	1 cut(s)	609
SspMI	CTAG	2 cut(s)	114, 618
StuI	AGGCCT	2 cut(s)	16, 616
StyD4I	CCNGG	4 cut(s)	68, 461, 1034, 1092
StyI	CCWWGG	5 cut(s)	427, 617, 904, 1066, 1216
TaaI	ACNGT	3 cut(s)	238, 1052, 1324
TaiI	ACGT	2 cut(s)	840, 937
TaqI	TCGA	2 cut(s)	107, 976
TaqII	GACCGA	2 cut(s)	147, 731
TauI	GCSGC	1 cut(s)	179
TfiI	GAWTC	2 cut(s)	1013, 1453
Tru1I	TTAA	2 cut(s)	672, 1277
Tru9I	TTAA	2 cut(s)	672, 1277
TscAI	CASTG	7 cut(s)	85, 243, 355, 1008, 1024, 1312, 1401
TseFI	GTSAC	2 cut(s)	451, 989
TseI	GCWGC	3 cut(s)	521, 821, 913
Tsp45I	GTSAC	2 cut(s)	451, 989
TspDTI	ATGAA	4 cut(s)	372, 650, 956, 1383
TspGWI	ACGGA	3 cut(s)	283, 873, 1165
TspRI	CASTG	7 cut(s)	85, 243, 355, 1008, 1024, 1312, 1401
Vha464I	CTTAAG	1 cut(s)	1276
VpaK11BI	GGWCC	3 cut(s)	431, 493, 827
XapI	RAATTY	3 cut(s)	642, 785, 1422
XceI	RCATGY	5 cut(s)	491, 558, 717, 1001, 1407
XmaJI	CCTAGG	1 cut(s)	617
XmiI	GTMKAC	3 cut(s)	107, 390, 867
XspI	CTAG	2 cut(s)	114, 618
Zsp2I	ATGCAT	1 cut(s)	342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.