Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001942

Physical Location & Seq

Genomic Coordinates Reverse (-)

2144340 .. 2146601

Gene Structure 2262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0016600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGACAACTTAATTCTCAGCCTCCTTCTCTTACTGGTCACCTCCAAAGGCGTTTCCGGTGCTACATTCACCTTCGTCAACAGATGTGACTACACAGTCTGGCCCGGGATTCTCGCAAATGCAAACAGTCCTAGGCTCGACAGCACAGGATTCGAGCTCCCAAGACAAACTGCCAGAACATTCCAAGCCCCGACCGGCTGGTCCGGCCGTTTCTGGGGCCGAACCGGCTGCACTTTCGACGGATCCGGGTCCGGGTCATGCCAAACCGGCGACTGTGGCTCCGGCACCGTGGAATGCAACGGCGCCGGAGCCGCCCCGCCGGCTACTCTAGCCGAGTTCACCCTCGGCACCGGCGGGCAGGACTTCTATGACGTCAGCCTCGTCGACGGGTACAACTTGCCCGTTTTCGTGGAAGGGACTGGCGGGTCGGGTCAGTGCGCTTCCACCGGGTGCTCCACGGATCTGAACCTGCAGTGCCCGACTGAGCTGAGGAGCGAGGACGGGAGCGCGTGCAAGAGCGCGTGTGAGGCGTTTGGGAGCCCTGAGTACTGCTGTAGCGGCGCGTATGGCTCACCCTCGACTTGTCGGCCGTCGGTTTACTCCGAGATGTTTAAGGCTGCTTGTCCCAAGTCGTATAGCTACGCGTACGACGACGCTACGAGTACGTTTACGTGCACCGGAGCTGATTATACGGTGACGTTTTGCCCTTCATCTCCAAGTCAGAAATCTTCTAGAGATTCAACACCAACGACAGGAGGAGCAACTTCACAAGATGGGGTTGCTGGGGCAGACCCGGGGTTCACTTATTCGGGTTCAACTGCAGGGTCGGTTCCGGGTACCGGGTCGGTTCCGGTTACTGGGTCAGGAGGTTCTGGATCTGGTGAGGCAATGCTGGCAGATGGGTCATGGTTAGCTGGTTTAGCCATGGGAGACTCACCAAGGGCATTGTGTCCCTCAACCCTAATGACTTTATCAACTTTATTTATTATCTTGTCCTATATTGTCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

336

Amino Acids

34.17

Weight (kDa)

4.27

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thaumatin	PF00314	27 - 236	1.5e-83	Thaumatin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001942)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0005767.1_g000020
rosa_rugosa	Rorug01G0066000 Rorug02G0124200 Rorug02G0138200 Rorug02G0185600 Rorug02G0257700 Rorug02G0261400 Rorug02G0270200 Rorug02G0288300 Rorug02G0292400 Rorug03G0123000 Rorug03G0264500 Rorug03G0272400 Rorug03G0276800 Rorug03G0295500 Rorug03G0345600 Rorug03G0355500 Rorug03G0362800.1 Rorug04G0050800 Rorug04G0062200 Rorug04G0099000 Rorug04G0134600 Rorug04G0136800 Rorug04G0142900 Rorug05G0138800 Rorug05G0173900 Rorug05G0221000 Rorug05G0240700 Rorug05G0243200 Rorug05G0246000 Rorug05G0256000.1 Rorug05G0261900 Rorug05G0268700 Rorug05G0317800 Rorug05G0451600 Rorug05G0539600 Rorug05G0539900 Rorug06G0016600 Rorug06G0053900 Rorug06G0065100 Rorug06G0079600 Rorug06G0093200 Rorug06G0243100 Rorug07G0151000.1 Rorug07G0190200 Rorug07G0286200

Species

Orthologous Gene IDs

rosa_multiflora

Rmu_sc0005767.1_g000020

rosa_rugosa

Rorug01G0066000 Rorug02G0124200 Rorug02G0138200 Rorug02G0185600 Rorug02G0257700 Rorug02G0261400 Rorug02G0270200 Rorug02G0288300 Rorug02G0292400 Rorug03G0123000 Rorug03G0264500 Rorug03G0272400 Rorug03G0276800 Rorug03G0295500 Rorug03G0345600 Rorug03G0355500 Rorug03G0362800.1 Rorug04G0050800 Rorug04G0062200 Rorug04G0099000 Rorug04G0134600 Rorug04G0136800 Rorug04G0142900 Rorug05G0138800 Rorug05G0173900 Rorug05G0221000 Rorug05G0240700 Rorug05G0243200 Rorug05G0246000 Rorug05G0256000.1 Rorug05G0261900 Rorug05G0268700 Rorug05G0317800 Rorug05G0451600 Rorug05G0539600 Rorug05G0539900 Rorug06G0016600 Rorug06G0053900 Rorug06G0065100 Rorug06G0079600 Rorug06G0093200 Rorug06G0243100 Rorug07G0151000.1 Rorug07G0190200 Rorug07G0286200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	95, 199, 424
AatII	GACGTC	1 cut(s)	375
Acc36I	ACCTGC	1 cut(s)	477
Acc65I	GGTACC	1 cut(s)	836
AccB1I	GGYRCC	4 cut(s)	284, 302, 347, 836
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	4 cut(s)	509, 521, 563, 644
AciI	CCGC	5 cut(s)	312, 317, 354, 423, 558
AclWI	GGATC	4 cut(s)	237, 250, 468, 883
AcoI	YGGCCR	2 cut(s)	205, 587
AcyI	GRCGYC	2 cut(s)	303, 372
AdeI	CACNNNGTG	1 cut(s)	450
AfaI	GTAC	5 cut(s)	392, 548, 647, 664, 838
AfiI	CCNNNNNNNGG	5 cut(s)	214, 252, 752, 839, 857
AflIII	ACRYGT	1 cut(s)	642
AgsI	TTSAA	2 cut(s)	741, 816
AluBI	AGCT	5 cut(s)	157, 487, 639, 683, 914
AluI	AGCT	5 cut(s)	157, 487, 639, 683, 914
Alw21I	GWGCWC	3 cut(s)	159, 455, 677
Alw26I	GTCTC	1 cut(s)	924
Alw44I	GTGCAC	1 cut(s)	673
AlwI	GGATC	4 cut(s)	237, 250, 468, 883
Ama87I	CYCGRG	2 cut(s)	104, 793
AoxI	GGCC	4 cut(s)	101, 205, 217, 587
ApaLI	GTGCAC	1 cut(s)	673
ApeKI	GCWGC	2 cut(s)	228, 617
Asp718I	GGTACC	1 cut(s)	836
AspA2I	CCTAGG	1 cut(s)	131
AspLEI	GCGC	5 cut(s)	305, 440, 509, 521, 563
AspS9I	GGNCC	4 cut(s)	102, 201, 217, 249
AsuC2I	CCSGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
AsuHPI	GGTGA	7 cut(s)	31, 61, 331, 564, 706, 893, 927
AvaI	CYCGRG	2 cut(s)	104, 793
AvaII	GGWCC	2 cut(s)	201, 249
AvrII	CCTAGG	1 cut(s)	131
BaeGI	GKGCMC	2 cut(s)	479, 677
BamHI	GGATCC	1 cut(s)	242
BanI	GGYRCC	4 cut(s)	284, 302, 347, 836
BanII	GRGCYC	2 cut(s)	159, 542
Bbv12I	GWGCWC	3 cut(s)	159, 455, 677
BbvCI	CCTCAGC	1 cut(s)	488
BbvI	GCAGC	2 cut(s)	215, 604
BccI	CCATC	2 cut(s)	767, 893
BceAI	ACGGC	3 cut(s)	192, 316, 574
BcgI	CGANNNNNNTGC	4 cut(s)	133, 167, 210, 244
BcnI	CCSGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
BcoDI	GTCTC	1 cut(s)	924
BfaI	CTAG	3 cut(s)	132, 329, 732
BfmI	CTRYAG	3 cut(s)	470, 553, 819
BfoI	RGCGCY	1 cut(s)	306
BfuAI	ACCTGC	1 cut(s)	477
BglI	GCCNNNNNGGC	3 cut(s)	225, 267, 320
BisI	GCNGC	4 cut(s)	229, 312, 559, 618
BlnI	CCTAGG	1 cut(s)	131
BlsI	GCNGC	4 cut(s)	230, 313, 560, 619
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
Bme18I	GGWCC	2 cut(s)	201, 249
BmeT110I	CYCGRG	2 cut(s)	104, 793
BmgT120I	GGNCC	4 cut(s)	102, 201, 217, 249
BmrFI	CCNGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
BmrI	ACTGGG	1 cut(s)	867
BmuI	ACTGGG	1 cut(s)	867
Bpu10I	CCTNAGC	1 cut(s)	488
BpuMI	CCSGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
BsaAI	YACGTR	1 cut(s)	672
BsaHI	GRCGYC	2 cut(s)	303, 372
BsaJI	CCNNGG	9 cut(s)	104, 131, 288, 343, 456, 793, 794, 924, 938
BsaWI	WCCGGW	3 cut(s)	56, 677, 850
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	5 cut(s)	214, 252, 752, 839, 857
Bse118I	RCCGGY	5 cut(s)	194, 224, 266, 319, 350
Bse1I	ACTGG	3 cut(s)	39, 424, 862
Bse3DI	GCAATG	1 cut(s)	894
BseDI	CCNNGG	9 cut(s)	104, 131, 288, 343, 456, 793, 794, 924, 938
BseLI	CCNNNNNNNGG	5 cut(s)	214, 252, 752, 839, 857
BseMI	GCAATG	1 cut(s)	894
BseMII	CTCAG	4 cut(s)	31, 474, 479, 534
BseNI	ACTGG	3 cut(s)	39, 424, 862
BseRI	GAGGAG	2 cut(s)	505, 771
BseSI	GKGCMC	2 cut(s)	479, 677
BseX3I	CGGCCG	2 cut(s)	205, 587
BseXI	GCAGC	2 cut(s)	215, 604
BseYI	CCCAGC	1 cut(s)	782
BsgI	GTGCAG	1 cut(s)	214
Bsh1236I	CGCG	4 cut(s)	509, 521, 563, 644
Bsh1285I	CGRYCG	3 cut(s)	195, 208, 590
BshFI	GGCC	4 cut(s)	103, 207, 219, 589
BshNI	GGYRCC	4 cut(s)	284, 302, 347, 836
BsiEI	CGRYCG	3 cut(s)	195, 208, 590
BsiHKAI	GWGCWC	3 cut(s)	159, 455, 677
BsiHKCI	CYCGRG	2 cut(s)	104, 793
BsiWI	CGTACG	1 cut(s)	645
BslFI	GGGAC	3 cut(s)	430, 609, 936
BslI	CCNNNNNNNGG	5 cut(s)	214, 252, 752, 839, 857
BsmAI	GTCTC	1 cut(s)	924
BsmFI	GGGAC	3 cut(s)	430, 609, 936
BsmI	GAATGC	1 cut(s)	299
BsnI	GGCC	4 cut(s)	103, 207, 219, 589
BsoBI	CYCGRG	2 cut(s)	104, 793
Bsp1286I	GDGCHC	5 cut(s)	159, 455, 479, 542, 677
Bsp143I	GATC	3 cut(s)	242, 460, 875
Bsp19I	CCATGG	1 cut(s)	924
BspACI	CCGC	5 cut(s)	312, 317, 354, 423, 558
BspANI	GGCC	4 cut(s)	103, 207, 219, 589
BspCNI	CTCAG	4 cut(s)	30, 475, 480, 535
BspFNI	CGCG	4 cut(s)	509, 521, 563, 644
BspMAI	CTGCAG	2 cut(s)	474, 823
BspMI	ACCTGC	1 cut(s)	477
BspPI	GGATC	4 cut(s)	237, 250, 468, 883
BspT107I	GGYRCC	4 cut(s)	284, 302, 347, 836
BsrDI	GCAATG	1 cut(s)	894
BsrFI	RCCGGY	5 cut(s)	194, 224, 266, 319, 350
BsrI	ACTGG	3 cut(s)	39, 424, 862
BssAI	RCCGGY	5 cut(s)	194, 224, 266, 319, 350
BssECI	CCNNGG	9 cut(s)	104, 131, 288, 343, 456, 793, 794, 924, 938
BssMI	GATC	3 cut(s)	242, 460, 875
BssNI	GRCGYC	2 cut(s)	303, 372
BssT1I	CCWWGG	3 cut(s)	131, 924, 938
Bst4CI	ACNGT	5 cut(s)	97, 128, 275, 289, 694
BstACI	GRCGYC	2 cut(s)	303, 372
BstBAI	YACGTR	1 cut(s)	672
BstC8I	GCNNGC	4 cut(s)	321, 356, 511, 894
BstDEI	CTNAG	4 cut(s)	17, 483, 488, 543
BstDSI	CCRYGG	3 cut(s)	288, 456, 924
BstEII	GGTNACC	1 cut(s)	37
BstFNI	CGCG	4 cut(s)	509, 521, 563, 644
BstH2I	RGCGCY	1 cut(s)	306
BstHHI	GCGC	5 cut(s)	305, 440, 509, 521, 563
BstKTI	GATC	3 cut(s)	245, 463, 878
BstMAI	GTCTC	1 cut(s)	924
BstMBI	GATC	3 cut(s)	242, 460, 875
BstMCI	CGRYCG	3 cut(s)	195, 208, 590
BstPI	GGTNACC	1 cut(s)	37
BstSCI	CCNGG	9 cut(s)	103, 104, 245, 251, 446, 792, 793, 832, 839
BstSFI	CTRYAG	3 cut(s)	470, 553, 819
BstSLI	GKGCMC	2 cut(s)	479, 677
BstUI	CGCG	4 cut(s)	509, 521, 563, 644
BstV1I	GCAGC	2 cut(s)	215, 604
BstX2I	RGATCY	3 cut(s)	242, 460, 875
BstYI	RGATCY	3 cut(s)	242, 460, 875
BstZI	CGGCCG	2 cut(s)	205, 587
BsuRI	GGCC	4 cut(s)	103, 207, 219, 589
BtgI	CCRYGG	3 cut(s)	288, 456, 924
BtsI	GCAGTG	1 cut(s)	479
BtsIMutI	CAGTG	2 cut(s)	440, 479
BveI	ACCTGC	1 cut(s)	477
Cac8I	GCNNGC	4 cut(s)	321, 356, 511, 894
CfoI	GCGC	5 cut(s)	305, 440, 509, 521, 563
Cfr10I	RCCGGY	5 cut(s)	194, 224, 266, 319, 350
Cfr13I	GGNCC	4 cut(s)	102, 201, 217, 249
Cfr9I	CCCGGG	2 cut(s)	104, 793
CseI	GACGC	1 cut(s)	662
Csp6I	GTAC	5 cut(s)	391, 547, 646, 663, 837
CviAII	CATG	3 cut(s)	258, 906, 925
CviQI	GTAC	5 cut(s)	391, 547, 646, 663, 837
DdeI	CTNAG	4 cut(s)	17, 483, 488, 543
DinI	GGCGCC	1 cut(s)	304
DpnI	GATC	3 cut(s)	244, 462, 877
DpnII	GATC	3 cut(s)	242, 460, 875
DraIII	CACNNNGTG	1 cut(s)	450
DrdI	GACNNNNNNGTC	3 cut(s)	95, 199, 424
DseDI	GACNNNNNNGTC	3 cut(s)	95, 199, 424
EaeI	YGGCCR	2 cut(s)	205, 587
EagI	CGGCCG	2 cut(s)	205, 587
Ecl136II	GAGCTC	1 cut(s)	157
EclXI	CGGCCG	2 cut(s)	205, 587
Eco130I	CCWWGG	3 cut(s)	131, 924, 938
Eco24I	GRGCYC	2 cut(s)	159, 542
Eco47I	GGWCC	2 cut(s)	201, 249
Eco52I	CGGCCG	2 cut(s)	205, 587
Eco53kI	GAGCTC	1 cut(s)	157
Eco88I	CYCGRG	2 cut(s)	104, 793
Eco91I	GGTNACC	1 cut(s)	37
EcoICRI	GAGCTC	1 cut(s)	157
EcoO65I	GGTNACC	1 cut(s)	37
EcoT14I	CCWWGG	3 cut(s)	131, 924, 938
EcoT38I	GRGCYC	2 cut(s)	159, 542
EgeI	GGCGCC	1 cut(s)	304
EheI	GGCGCC	1 cut(s)	304
ErhI	CCWWGG	3 cut(s)	131, 924, 938
FaeI	CATG	3 cut(s)	261, 909, 928
FaiI	YATR	8 cut(s)	259, 369, 567, 636, 690, 907, 926, 999
FaqI	GGGAC	3 cut(s)	430, 609, 936
FatI	CATG	3 cut(s)	257, 905, 924
FauI	CCCGC	3 cut(s)	324, 347, 416
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	4 cut(s)	229, 312, 559, 618
FriOI	GRGCYC	2 cut(s)	159, 542
Fsp4HI	GCNGC	4 cut(s)	229, 312, 559, 618
FspBI	CTAG	3 cut(s)	132, 329, 732
GlaI	GCGC	5 cut(s)	304, 439, 508, 520, 562
GluI	GCNGC	4 cut(s)	229, 312, 559, 618
GsaI	CCCAGC	1 cut(s)	786
HaeII	RGCGCY	1 cut(s)	306
HaeIII	GGCC	4 cut(s)	103, 207, 219, 589
HgaI	GACGC	1 cut(s)	662
HhaI	GCGC	5 cut(s)	305, 440, 509, 521, 563
Hin1I	GRCGYC	2 cut(s)	303, 372
Hin1II	CATG	3 cut(s)	261, 909, 928
Hin6I	GCGC	5 cut(s)	303, 438, 507, 519, 561
HinP1I	GCGC	5 cut(s)	303, 438, 507, 519, 561
HincII	GTYRAC	2 cut(s)	79, 385
HindII	GTYRAC	2 cut(s)	79, 385
HinfI	GANTC	4 cut(s)	109, 150, 737, 932
HphI	GGTGA	7 cut(s)	31, 61, 331, 564, 706, 893, 927
Hpy166II	GTNNAC	7 cut(s)	79, 339, 385, 598, 669, 675, 801
Hpy188I	TCNGA	3 cut(s)	465, 604, 723
Hpy188III	TCNNGA	3 cut(s)	732, 864, 873
Hpy8I	GTNNAC	7 cut(s)	79, 339, 385, 598, 669, 675, 801
Hpy99I	CGWCG	6 cut(s)	242, 386, 389, 595, 653, 656
HpyAV	CCTTC	4 cut(s)	35, 82, 407, 717
HpyCH4III	ACNGT	5 cut(s)	97, 128, 275, 289, 694
HpyCH4IV	ACGT	4 cut(s)	372, 665, 671, 698
HpyCH4V	TGCA	7 cut(s)	122, 231, 297, 472, 513, 675, 821
HpyF3I	CTNAG	4 cut(s)	17, 483, 488, 543
HpySE526I	ACGT	4 cut(s)	372, 665, 671, 698
Hsp92I	GRCGYC	2 cut(s)	303, 372
Hsp92II	CATG	3 cut(s)	261, 909, 928
HspAI	GCGC	5 cut(s)	303, 438, 507, 519, 561
KasI	GGCGCC	1 cut(s)	302
KpnI	GGTACC	1 cut(s)	840
KroI	GCCGGC	1 cut(s)	319
KroNI	GCCGGC	1 cut(s)	321
Kzo9I	GATC	3 cut(s)	242, 460, 875
LmnI	GCTCC	9 cut(s)	162, 284, 308, 458, 492, 504, 537, 680, 758
Lsp1109I	GCAGC	2 cut(s)	215, 604
MaeI	CTAG	3 cut(s)	132, 329, 732
MaeII	ACGT	4 cut(s)	372, 665, 671, 698
MaeIII	GTNAC	4 cut(s)	37, 86, 694, 853
MalI	GATC	3 cut(s)	244, 462, 877
MboI	GATC	3 cut(s)	242, 460, 875
MboII	GAAGA	1 cut(s)	720
MflI	RGATCY	3 cut(s)	242, 460, 875
MhlI	GDGCHC	5 cut(s)	159, 455, 479, 542, 677
MluCI	AATT	1 cut(s)	12
MluI	ACGCGT	1 cut(s)	642
Mly113I	GGCGCC	1 cut(s)	303
MlyI	GAGTC	1 cut(s)	926
MroNI	GCCGGC	1 cut(s)	319
MseI	TTAA	2 cut(s)	11, 612
MspR9I	CCNGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
Mva1269I	GAATGC	1 cut(s)	299
MvnI	CGCG	4 cut(s)	509, 521, 563, 644
NaeI	GCCGGC	1 cut(s)	321
NarI	GGCGCC	1 cut(s)	303
NciI	CCSGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
NcoI	CCATGG	1 cut(s)	924
NdeII	GATC	3 cut(s)	242, 460, 875
NgoMIV	GCCGGC	1 cut(s)	319
NlaIII	CATG	3 cut(s)	261, 909, 928
NmeAIII	GCCGAG	2 cut(s)	324, 358
NmuCI	GTSAC	3 cut(s)	37, 86, 694
PcsI	WCGNNNNNNNCGW	2 cut(s)	378, 648
PctI	GAATGC	1 cut(s)	299
PdiI	GCCGGC	1 cut(s)	321
PfeI	GAWTC	3 cut(s)	109, 150, 737
Pfl23II	CGTACG	1 cut(s)	645
PkrI	GCNGC	4 cut(s)	230, 313, 560, 619
PleI	GAGTC	1 cut(s)	926
PluTI	GGCGCC	1 cut(s)	306
PpsI	GAGTC	1 cut(s)	926
Ppu21I	YACGTR	1 cut(s)	672
Psp124BI	GAGCTC	1 cut(s)	159
PspEI	GGTNACC	1 cut(s)	37
PspFI	CCCAGC	1 cut(s)	782
PspLI	CGTACG	1 cut(s)	645
PspPI	GGNCC	4 cut(s)	102, 201, 217, 249
PstI	CTGCAG	2 cut(s)	474, 823
PsuI	RGATCY	3 cut(s)	242, 460, 875
RsaI	GTAC	5 cut(s)	392, 548, 647, 664, 838
RsaNI	GTAC	5 cut(s)	391, 547, 646, 663, 837
SacI	GAGCTC	1 cut(s)	159
SalI	GTCGAC	1 cut(s)	383
SaqAI	TTAA	2 cut(s)	11, 612
SatI	GCNGC	4 cut(s)	229, 312, 559, 618
Sau3AI	GATC	3 cut(s)	242, 460, 875
Sau96I	GGNCC	4 cut(s)	102, 201, 217, 249
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	1 cut(s)	926
ScrFI	CCNGG	9 cut(s)	105, 106, 247, 253, 448, 794, 795, 834, 841
SduI	GDGCHC	5 cut(s)	159, 455, 479, 542, 677
SfcI	CTRYAG	3 cut(s)	470, 553, 819
SfoI	GGCGCC	1 cut(s)	304
SgrAI	CRCCGGYG	1 cut(s)	350
SgrDI	CGTCGACG	1 cut(s)	383
SinI	GGWCC	2 cut(s)	201, 249
SmaI	CCCGGG	2 cut(s)	106, 795
Sse9I	AATT	1 cut(s)	12
SsiI	CCGC	5 cut(s)	312, 317, 354, 423, 558
SspDI	GGCGCC	1 cut(s)	302
SspMI	CTAG	3 cut(s)	132, 329, 732
SstI	GAGCTC	1 cut(s)	159
StyD4I	CCNGG	9 cut(s)	103, 104, 245, 251, 446, 792, 793, 832, 839
StyI	CCWWGG	3 cut(s)	131, 924, 938
TaaI	ACNGT	5 cut(s)	97, 128, 275, 289, 694
TaiI	ACGT	4 cut(s)	375, 668, 674, 701
TaqI	TCGA	5 cut(s)	138, 153, 237, 384, 578
TasI	AATT	1 cut(s)	12
TatI	WGTACW	1 cut(s)	546
TauI	GCSGC	2 cut(s)	314, 561
TfiI	GAWTC	3 cut(s)	109, 150, 737
Tru1I	TTAA	2 cut(s)	11, 612
Tru9I	TTAA	2 cut(s)	11, 612
TscAI	CASTG	2 cut(s)	440, 479
TseFI	GTSAC	3 cut(s)	37, 86, 694
TseI	GCWGC	2 cut(s)	228, 617
Tsp45I	GTSAC	3 cut(s)	37, 86, 694
TspDTI	ATGAA	1 cut(s)	699
TspGWI	ACGGA	2 cut(s)	255, 473
TspMI	CCCGGG	2 cut(s)	104, 793
TspRI	CASTG	2 cut(s)	440, 479
VneI	GTGCAC	1 cut(s)	673
VpaK11BI	GGWCC	2 cut(s)	201, 249
XbaI	TCTAGA	1 cut(s)	731
XmaI	CCCGGG	2 cut(s)	104, 793
XmaJI	CCTAGG	1 cut(s)	131
XmiI	GTMKAC	1 cut(s)	384
XspI	CTAG	3 cut(s)	132, 329, 732
ZraI	GACGTC	1 cut(s)	373
ZrmI	AGTACT	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.