Nuclear pore complex protein NUP160
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 36 - 75 | 8.2e-08 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 164 - 280 | 6.5e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 463 - 523 | 2.2e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 488 - 547 | 9.9e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 536 - 595 | 1e-07 | Leucine rich repeat |
| Pkinase | PF00069 | 690 - 851 | 8.6e-32 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 690 - 832 | 4.1e-27 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1880 |
| Acc65I | GGTACC | 1 cut(s) | 2531 |
| AccB1I | GGYRCC | 2 cut(s) | 22, 2531 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1868, 2129 |
| AccI | GTMKAC | 1 cut(s) | 2106 |
| AccII | CGCG | 2 cut(s) | 473, 2069 |
| AccIII | TCCGGA | 1 cut(s) | 1225 |
| AciI | CCGC | 3 cut(s) | 549, 2069, 2091 |
| AclWI | GGATC | 3 cut(s) | 742, 1773, 2169 |
| AcoI | YGGCCR | 4 cut(s) | 648, 765, 1000, 1093 |
| AcsI | RAATTY | 7 cut(s) | 570, 717, 1462, 1565, 1578, 1733, 2254 |
| AcuI | CTGAAG | 2 cut(s) | 351, 1507 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 42, 272, 731, 1805, 1868, 2129, 2148, 2556 |
| AflIII | ACRYGT | 3 cut(s) | 252, 471, 2235 |
| AgeI | ACCGGT | 2 cut(s) | 926, 1127 |
| AgsI | TTSAA | 8 cut(s) | 394, 588, 596, 814, 1259, 1459, 2155, 2498 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 348 |
| AjnI | CCWGG | 3 cut(s) | 357, 427, 1867 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 395, 427 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1481, 1513 |
| Alw21I | GWGCWC | 2 cut(s) | 1341, 1909 |
| Alw26I | GTCTC | 1 cut(s) | 1866 |
| AlwI | GGATC | 3 cut(s) | 742, 1773, 2169 |
| Aor13HI | TCCGGA | 1 cut(s) | 1225 |
| AoxI | GGCC | 9 cut(s) | 612, 648, 765, 775, 903, 1000, 1093, 1217, 1237 |
| ApeKI | GCWGC | 5 cut(s) | 748, 1557, 1586, 1845, 2363 |
| ApoI | RAATTY | 7 cut(s) | 570, 717, 1462, 1565, 1578, 1733, 2254 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1662, 1694, 2438, 2470 |
| AsiGI | ACCGGT | 2 cut(s) | 926, 1127 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 557, 583, 1208, 1493 |
| Asp718I | GGTACC | 1 cut(s) | 2531 |
| AspS9I | GGNCC | 7 cut(s) | 149, 613, 904, 1217, 1237, 1718, 2501 |
| AsuC2I | CCSGG | 4 cut(s) | 576, 1144, 1414, 1501 |
| AsuHPI | GGTGA | 8 cut(s) | 182, 313, 916, 941, 1034, 1132, 1586, 2144 |
| AsuII | TTCGAA | 1 cut(s) | 2457 |
| AvaII | GGWCC | 3 cut(s) | 149, 1718, 2501 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1097, 1130 |
| BalI | TGGCCA | 1 cut(s) | 767 |
| BanI | GGYRCC | 2 cut(s) | 22, 2531 |
| BanII | GRGCYC | 3 cut(s) | 183, 1341, 1909 |
| BauI | CACGAG | 2 cut(s) | 234, 1155 |
| BbsI | GAAGAC | 4 cut(s) | 339, 344, 491, 2511 |
| Bbv12I | GWGCWC | 2 cut(s) | 1341, 1909 |
| BbvI | GCAGC | 5 cut(s) | 735, 1569, 1573, 1857, 2350 |
| BccI | CCATC | 2 cut(s) | 13, 2150 |
| BceAI | ACGGC | 1 cut(s) | 1015 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1549, 1583 |
| BciT130I | CCWGG | 3 cut(s) | 359, 429, 1869 |
| BclI | TGATCA | 1 cut(s) | 1326 |
| BcnI | CCSGG | 4 cut(s) | 576, 1144, 1414, 1501 |
| BcoDI | GTCTC | 1 cut(s) | 1866 |
| BfaI | CTAG | 3 cut(s) | 167, 758, 1619 |
| BfmI | CTRYAG | 1 cut(s) | 1843 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 656, 783 |
| BisI | GCNGC | 5 cut(s) | 749, 1558, 1587, 1846, 2364 |
| BlsI | GCNGC | 5 cut(s) | 750, 1559, 1588, 1847, 2365 |
| BmcAI | AGTACT | 1 cut(s) | 2492 |
| Bme1390I | CCNGG | 7 cut(s) | 359, 429, 576, 1144, 1414, 1501, 1869 |
| Bme18I | GGWCC | 3 cut(s) | 149, 1718, 2501 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 348 |
| BmgT120I | GGNCC | 7 cut(s) | 149, 613, 904, 1217, 1237, 1718, 2501 |
| BmiI | GGNNCC | 5 cut(s) | 24, 34, 151, 180, 2533 |
| BmrFI | CCNGG | 7 cut(s) | 359, 429, 576, 1144, 1414, 1501, 1869 |
| BmrI | ACTGGG | 2 cut(s) | 184, 2546 |
| BmsI | GCATC | 1 cut(s) | 117 |
| BmuI | ACTGGG | 2 cut(s) | 184, 2546 |
| BpiI | GAAGAC | 4 cut(s) | 339, 344, 491, 2511 |
| BpmI | CTGGAG | 9 cut(s) | 380, 450, 585, 852, 1058, 1890, 1923, 2039, 2118 |
| Bpu14I | TTCGAA | 1 cut(s) | 2457 |
| BpuEI | CTTGAG | 8 cut(s) | 116, 479, 527, 659, 941, 959, 1330, 1684 |
| BpuMI | CCSGG | 4 cut(s) | 576, 1144, 1414, 1501 |
| BsaI | GGTCTC | 1 cut(s) | 1866 |
| BsaJI | CCNNGG | 1 cut(s) | 357 |
| BsaWI | WCCGGW | 7 cut(s) | 257, 283, 926, 1081, 1127, 1225, 2208 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 1481, 1511 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 42, 272, 731, 1805, 1868, 2129, 2148, 2556 |
| Bse118I | RCCGGY | 4 cut(s) | 25, 926, 1127, 1239 |
| Bse1I | ACTGG | 7 cut(s) | 179, 516, 568, 1792, 1906, 2056, 2552 |
| Bse3DI | GCAATG | 2 cut(s) | 324, 2544 |
| BseAI | TCCGGA | 1 cut(s) | 1225 |
| BseBI | CCWGG | 3 cut(s) | 359, 429, 1869 |
| BseDI | CCNNGG | 1 cut(s) | 357 |
| BseGI | GGATG | 2 cut(s) | 24, 2425 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 42, 272, 731, 1805, 1868, 2129, 2148, 2556 |
| BseMI | GCAATG | 2 cut(s) | 324, 2544 |
| BseMII | CTCAG | 2 cut(s) | 457, 717 |
| BseNI | ACTGG | 7 cut(s) | 179, 516, 568, 1792, 1906, 2056, 2552 |
| BseRI | GAGGAG | 1 cut(s) | 44 |
| BseXI | GCAGC | 5 cut(s) | 735, 1569, 1573, 1857, 2350 |
| Bsh1236I | CGCG | 2 cut(s) | 473, 2069 |
| BshFI | GGCC | 9 cut(s) | 614, 650, 767, 777, 905, 1002, 1095, 1219, 1239 |
| BshNI | GGYRCC | 2 cut(s) | 22, 2531 |
| BshTI | ACCGGT | 2 cut(s) | 926, 1127 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1341, 1909 |
| BsiWI | CGTACG | 1 cut(s) | 474 |
| BslFI | GGGAC | 6 cut(s) | 135, 1303, 1600, 2128, 2208, 2307 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 42, 272, 731, 1805, 1868, 2129, 2148, 2556 |
| BsmAI | GTCTC | 1 cut(s) | 1866 |
| BsmFI | GGGAC | 6 cut(s) | 135, 1303, 1600, 2128, 2208, 2307 |
| BsnI | GGCC | 9 cut(s) | 614, 650, 767, 777, 905, 1002, 1095, 1219, 1239 |
| Bso31I | GGTCTC | 1 cut(s) | 1866 |
| Bsp119I | TTCGAA | 1 cut(s) | 2457 |
| Bsp1286I | GDGCHC | 3 cut(s) | 183, 1341, 1909 |
| Bsp13I | TCCGGA | 1 cut(s) | 1225 |
| BspACI | CCGC | 3 cut(s) | 549, 2069, 2091 |
| BspANI | GGCC | 9 cut(s) | 614, 650, 767, 777, 905, 1002, 1095, 1219, 1239 |
| BspCNI | CTCAG | 2 cut(s) | 456, 718 |
| BspEI | TCCGGA | 1 cut(s) | 1225 |
| BspFNI | CGCG | 2 cut(s) | 473, 2069 |
| BspLI | GGNNCC | 5 cut(s) | 24, 34, 151, 180, 2533 |
| BspMAI | CTGCAG | 1 cut(s) | 1847 |
| BspPI | GGATC | 3 cut(s) | 742, 1773, 2169 |
| BspT104I | TTCGAA | 1 cut(s) | 2457 |
| BspT107I | GGYRCC | 2 cut(s) | 22, 2531 |
| BspTNI | GGTCTC | 1 cut(s) | 1866 |
| BsrDI | GCAATG | 2 cut(s) | 324, 2544 |
| BsrFI | RCCGGY | 4 cut(s) | 25, 926, 1127, 1239 |
| BsrI | ACTGG | 7 cut(s) | 179, 516, 568, 1792, 1906, 2056, 2552 |
| BssAI | RCCGGY | 4 cut(s) | 25, 926, 1127, 1239 |
| BssECI | CCNNGG | 1 cut(s) | 357 |
| BssSI | CACGAG | 2 cut(s) | 234, 1155 |
| Bst2BI | CACGAG | 2 cut(s) | 234, 1155 |
| Bst2UI | CCWGG | 3 cut(s) | 359, 429, 1869 |
| Bst4CI | ACNGT | 6 cut(s) | 623, 713, 2014, 2129, 2151, 2559 |
| Bst6I | CTCTTC | 3 cut(s) | 190, 1961, 2150 |
| BstBI | TTCGAA | 1 cut(s) | 2457 |
| BstC8I | GCNNGC | 6 cut(s) | 633, 652, 769, 889, 1750, 2399 |
| BstDEI | CTNAG | 4 cut(s) | 443, 521, 601, 726 |
| BstEII | GGTNACC | 1 cut(s) | 1130 |
| BstF5I | GGATG | 2 cut(s) | 24, 2425 |
| BstFNI | CGCG | 2 cut(s) | 473, 2069 |
| BstMAI | GTCTC | 1 cut(s) | 1866 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 656, 783, 1918, 2360, 2468 |
| BstNI | CCWGG | 3 cut(s) | 359, 429, 1869 |
| BstNSI | RCATGY | 3 cut(s) | 2239, 2278, 2518 |
| BstPI | GGTNACC | 1 cut(s) | 1130 |
| BstSCI | CCNGG | 7 cut(s) | 357, 427, 574, 1142, 1412, 1499, 1867 |
| BstSFI | CTRYAG | 1 cut(s) | 1843 |
| BstUI | CGCG | 2 cut(s) | 473, 2069 |
| BstV1I | GCAGC | 5 cut(s) | 735, 1569, 1573, 1857, 2350 |
| BstV2I | GAAGAC | 4 cut(s) | 339, 344, 491, 2511 |
| BstX2I | RGATCY | 1 cut(s) | 1765 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 854, 1214, 1358 |
| BstYI | RGATCY | 1 cut(s) | 1765 |
| BsuRI | GGCC | 9 cut(s) | 614, 650, 767, 777, 905, 1002, 1095, 1219, 1239 |
| BtgZI | GCGATG | 1 cut(s) | 1873 |
| BtsCI | GGATG | 2 cut(s) | 24, 2425 |
| BtsIMutI | CAGTG | 7 cut(s) | 421, 561, 859, 1785, 1899, 2063, 2134 |
| Cac8I | GCNNGC | 6 cut(s) | 633, 652, 769, 889, 1750, 2399 |
| Cfr10I | RCCGGY | 4 cut(s) | 25, 926, 1127, 1239 |
| Cfr13I | GGNCC | 7 cut(s) | 149, 613, 904, 1217, 1237, 1718, 2501 |
| CseI | GACGC | 1 cut(s) | 479 |
| CspAI | ACCGGT | 2 cut(s) | 926, 1127 |
| CspCI | CAANNNNNGTGG | 9 cut(s) | 711, 746, 1552, 1587, 1710, 1745, 2375, 2410, 2554 |
| DdeI | CTNAG | 4 cut(s) | 443, 521, 601, 726 |
| DraI | TTTAAA | 2 cut(s) | 384, 837 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1880 |
| DriI | GACNNNNNGTC | 1 cut(s) | 348 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1880 |
| EaeI | YGGCCR | 4 cut(s) | 648, 765, 1000, 1093 |
| Eam1104I | CTCTTC | 3 cut(s) | 190, 1961, 2150 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 348 |
| EarI | CTCTTC | 3 cut(s) | 190, 1961, 2150 |
| Ecl136II | GAGCTC | 2 cut(s) | 1339, 1907 |
| Eco24I | GRGCYC | 3 cut(s) | 183, 1341, 1909 |
| Eco31I | GGTCTC | 1 cut(s) | 1866 |
| Eco47I | GGWCC | 3 cut(s) | 149, 1718, 2501 |
| Eco53kI | GAGCTC | 2 cut(s) | 1339, 1907 |
| Eco57I | CTGAAG | 2 cut(s) | 351, 1507 |
| Eco91I | GGTNACC | 1 cut(s) | 1130 |
| EcoICRI | GAGCTC | 2 cut(s) | 1339, 1907 |
| EcoO65I | GGTNACC | 1 cut(s) | 1130 |
| EcoRI | GAATTC | 2 cut(s) | 717, 1733 |
| EcoRII | CCWGG | 3 cut(s) | 357, 427, 1867 |
| EcoT38I | GRGCYC | 3 cut(s) | 183, 1341, 1909 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2013, 2045 |
| FaqI | GGGAC | 6 cut(s) | 135, 1303, 1600, 2128, 2208, 2307 |
| FauI | CCCGC | 1 cut(s) | 542 |
| FbaI | TGATCA | 1 cut(s) | 1326 |
| FblI | GTMKAC | 1 cut(s) | 2106 |
| Fnu4HI | GCNGC | 5 cut(s) | 749, 1558, 1587, 1846, 2364 |
| FokI | GGATG | 2 cut(s) | 31, 2432 |
| FriOI | GRGCYC | 3 cut(s) | 183, 1341, 1909 |
| Fsp4HI | GCNGC | 5 cut(s) | 749, 1558, 1587, 1846, 2364 |
| FspBI | CTAG | 3 cut(s) | 167, 758, 1619 |
| GluI | GCNGC | 5 cut(s) | 749, 1558, 1587, 1846, 2364 |
| GsuI | CTGGAG | 9 cut(s) | 380, 450, 585, 852, 1058, 1890, 1923, 2039, 2118 |
| HaeIII | GGCC | 9 cut(s) | 614, 650, 767, 777, 905, 1002, 1095, 1219, 1239 |
| HgaI | GACGC | 1 cut(s) | 479 |
| HincII | GTYRAC | 1 cut(s) | 316 |
| HindII | GTYRAC | 1 cut(s) | 316 |
| HindIII | AAGCTT | 1 cut(s) | 598 |
| HphI | GGTGA | 8 cut(s) | 182, 313, 916, 941, 1034, 1132, 1586, 2144 |
| Hpy166II | GTNNAC | 6 cut(s) | 316, 823, 1443, 1529, 2107, 2250 |
| Hpy188I | TCNGA | 8 cut(s) | 303, 446, 1265, 1597, 1739, 1979, 2406, 2480 |
| Hpy8I | GTNNAC | 6 cut(s) | 316, 823, 1443, 1529, 2107, 2250 |
| Hpy99I | CGWCG | 4 cut(s) | 473, 692, 713, 799 |
| HpyAV | CCTTC | 4 cut(s) | 214, 519, 1799, 2313 |
| HpyCH4III | ACNGT | 6 cut(s) | 623, 713, 2014, 2129, 2151, 2559 |
| HpyCH4IV | ACGT | 5 cut(s) | 252, 687, 819, 1613, 2049 |
| HpyCH4V | TGCA | 9 cut(s) | 751, 1167, 1245, 1375, 1589, 1845, 2305, 2366, 2514 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 656, 783, 1918, 2360, 2468 |
| HpyF3I | CTNAG | 4 cut(s) | 443, 521, 601, 726 |
| HpySE526I | ACGT | 5 cut(s) | 252, 687, 819, 1613, 2049 |
| Kpn2I | TCCGGA | 1 cut(s) | 1225 |
| KpnI | GGTACC | 1 cut(s) | 2535 |
| Ksp22I | TGATCA | 1 cut(s) | 1326 |
| LmnI | GCTCC | 5 cut(s) | 178, 206, 1390, 1853, 1904 |
| Lsp1109I | GCAGC | 5 cut(s) | 735, 1569, 1573, 1857, 2350 |
| LweI | GCATC | 1 cut(s) | 117 |
| MaeI | CTAG | 3 cut(s) | 167, 758, 1619 |
| MaeII | ACGT | 5 cut(s) | 252, 687, 819, 1613, 2049 |
| MaeIII | GTNAC | 6 cut(s) | 221, 436, 1123, 1130, 2540, 2559 |
| MflI | RGATCY | 1 cut(s) | 1765 |
| MhlI | GDGCHC | 3 cut(s) | 183, 1341, 1909 |
| MlsI | TGGCCA | 1 cut(s) | 767 |
| MluI | ACGCGT | 1 cut(s) | 471 |
| MluNI | TGGCCA | 1 cut(s) | 767 |
| MlyI | GAGTC | 7 cut(s) | 358, 505, 1096, 1465, 1539, 1890, 2441 |
| MmeI | TCCRAC | 2 cut(s) | 426, 1823 |
| Mox20I | TGGCCA | 1 cut(s) | 767 |
| MroI | TCCGGA | 1 cut(s) | 1225 |
| MroXI | GAANNNNTTC | 4 cut(s) | 557, 583, 1208, 1493 |
| MscI | TGGCCA | 1 cut(s) | 767 |
| MseI | TTAA | 6 cut(s) | 383, 836, 1538, 1625, 1692, 2184 |
| MslI | CAYNNNNRTG | 3 cut(s) | 852, 1356, 2418 |
| Msp20I | TGGCCA | 1 cut(s) | 767 |
| MspA1I | CMGCKG | 1 cut(s) | 771 |
| MspR9I | CCNGG | 7 cut(s) | 359, 429, 576, 1144, 1414, 1501, 1869 |
| MvaI | CCWGG | 3 cut(s) | 359, 429, 1869 |
| MvnI | CGCG | 2 cut(s) | 473, 2069 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 656, 783, 1918, 2360, 2468 |
| NciI | CCSGG | 4 cut(s) | 576, 1144, 1414, 1501 |
| NlaIV | GGNNCC | 5 cut(s) | 24, 34, 151, 180, 2533 |
| NmeAIII | GCCGAG | 1 cut(s) | 525 |
| NmuCI | GTSAC | 3 cut(s) | 221, 436, 2559 |
| NspI | RCATGY | 3 cut(s) | 2239, 2278, 2518 |
| NspV | TTCGAA | 1 cut(s) | 2457 |
| PciI | ACATGT | 1 cut(s) | 2235 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 474, 794 |
| PdmI | GAANNNNTTC | 4 cut(s) | 557, 583, 1208, 1493 |
| Pfl23II | CGTACG | 1 cut(s) | 474 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1868, 2129 |
| PfoI | TCCNGGA | 3 cut(s) | 427, 574, 1412 |
| PinAI | ACCGGT | 2 cut(s) | 926, 1127 |
| PkrI | GCNGC | 5 cut(s) | 750, 1559, 1588, 1847, 2365 |
| PleI | GAGTC | 7 cut(s) | 357, 504, 1095, 1465, 1539, 1890, 2441 |
| PpsI | GAGTC | 7 cut(s) | 357, 504, 1095, 1465, 1539, 1890, 2441 |
| PscI | ACATGT | 1 cut(s) | 2235 |
| Psp124BI | GAGCTC | 2 cut(s) | 1341, 1909 |
| Psp6I | CCWGG | 3 cut(s) | 357, 427, 1867 |
| PspEI | GGTNACC | 1 cut(s) | 1130 |
| PspGI | CCWGG | 3 cut(s) | 357, 427, 1867 |
| PspLI | CGTACG | 1 cut(s) | 474 |
| PspN4I | GGNNCC | 5 cut(s) | 24, 34, 151, 180, 2533 |
| PspPI | GGNCC | 7 cut(s) | 149, 613, 904, 1217, 1237, 1718, 2501 |
| PstI | CTGCAG | 1 cut(s) | 1847 |
| PsuI | RGATCY | 1 cut(s) | 1765 |
| PvuII | CAGCTG | 1 cut(s) | 771 |
| RseI | CAYNNNNRTG | 3 cut(s) | 852, 1356, 2418 |
| SacI | GAGCTC | 2 cut(s) | 1341, 1909 |
| SaqAI | TTAA | 6 cut(s) | 383, 836, 1538, 1625, 1692, 2184 |
| SatI | GCNGC | 5 cut(s) | 749, 1558, 1587, 1846, 2364 |
| Sau96I | GGNCC | 7 cut(s) | 149, 613, 904, 1217, 1237, 1718, 2501 |
| ScaI | AGTACT | 1 cut(s) | 2492 |
| SchI | GAGTC | 7 cut(s) | 358, 505, 1096, 1465, 1539, 1890, 2441 |
| ScrFI | CCNGG | 7 cut(s) | 359, 429, 576, 1144, 1414, 1501, 1869 |
| SduI | GDGCHC | 3 cut(s) | 183, 1341, 1909 |
| SfaNI | GCATC | 1 cut(s) | 117 |
| SfcI | CTRYAG | 1 cut(s) | 1843 |
| SfuI | TTCGAA | 1 cut(s) | 2457 |
| SgrAI | CRCCGGYG | 1 cut(s) | 926 |
| SinI | GGWCC | 3 cut(s) | 149, 1718, 2501 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 852, 1356, 2418 |
| SmlI | CTYRAG | 8 cut(s) | 131, 458, 506, 674, 956, 974, 1309, 1699 |
| SmoI | CTYRAG | 8 cut(s) | 131, 458, 506, 674, 956, 974, 1309, 1699 |
| SsiI | CCGC | 3 cut(s) | 549, 2069, 2091 |
| SspI | AATATT | 1 cut(s) | 608 |
| SspMI | CTAG | 3 cut(s) | 167, 758, 1619 |
| SstI | GAGCTC | 2 cut(s) | 1341, 1909 |
| StyD4I | CCNGG | 7 cut(s) | 357, 427, 574, 1142, 1412, 1499, 1867 |
| TaaI | ACNGT | 6 cut(s) | 623, 713, 2014, 2129, 2151, 2559 |
| TaiI | ACGT | 5 cut(s) | 255, 690, 822, 1616, 2052 |
| TaqI | TCGA | 6 cut(s) | 278, 468, 708, 1395, 1548, 2457 |
| TatI | WGTACW | 5 cut(s) | 1945, 2023, 2247, 2271, 2490 |
| Tru1I | TTAA | 6 cut(s) | 383, 836, 1538, 1625, 1692, 2184 |
| Tru9I | TTAA | 6 cut(s) | 383, 836, 1538, 1625, 1692, 2184 |
| TscAI | CASTG | 7 cut(s) | 421, 568, 859, 1792, 1906, 2063, 2134 |
| TseFI | GTSAC | 3 cut(s) | 221, 436, 2559 |
| TseI | GCWGC | 5 cut(s) | 748, 1557, 1586, 1845, 2363 |
| Tsp45I | GTSAC | 3 cut(s) | 221, 436, 2559 |
| TspDTI | ATGAA | 7 cut(s) | 58, 207, 933, 1006, 1116, 1286, 1502 |
| TspGWI | ACGGA | 1 cut(s) | 1359 |
| TspRI | CASTG | 7 cut(s) | 421, 568, 859, 1792, 1906, 2063, 2134 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1868, 2129 |
| VpaK11BI | GGWCC | 3 cut(s) | 149, 1718, 2501 |
| XapI | RAATTY | 7 cut(s) | 570, 717, 1462, 1565, 1578, 1733, 2254 |
| XbaI | TCTAGA | 1 cut(s) | 757 |
| XceI | RCATGY | 3 cut(s) | 2239, 2278, 2518 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1865 |
| XmiI | GTMKAC | 1 cut(s) | 2106 |
| XmnI | GAANNNNTTC | 4 cut(s) | 557, 583, 1208, 1493 |
| XspI | CTAG | 3 cut(s) | 167, 758, 1619 |
| ZrmI | AGTACT | 1 cut(s) | 2492 |