xylogalacturonan metabolic process
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 36 - 73 | 3e-09 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 90 - 182 | 8.1e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 145 - 184 | 1.9e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 149 - 184 | 4.9e-06 | Leucine Rich repeats (2 copies) |
| Pkinase | PF00069 | 297 - 566 | 2.5e-39 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 300 - 568 | 4.7e-41 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 698 |
| Acc65I | GGTACC | 1 cut(s) | 1382 |
| AccB1I | GGYRCC | 1 cut(s) | 1382 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 429, 1222 |
| AccIII | TCCGGA | 1 cut(s) | 493 |
| AciI | CCGC | 1 cut(s) | 554 |
| AclWI | GGATC | 2 cut(s) | 540, 1725 |
| AcoI | YGGCCR | 2 cut(s) | 154, 1181 |
| AcsI | RAATTY | 5 cut(s) | 299, 561, 825, 864, 1772 |
| AcuI | CTGAAG | 4 cut(s) | 27, 391, 800, 1413 |
| AfaI | GTAC | 4 cut(s) | 1026, 1081, 1384, 1627 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 247, 429, 1222, 1316 |
| AgsI | TTSAA | 8 cut(s) | 107, 595, 634, 669, 869, 1273, 1514, 1754 |
| AjnI | CCWGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 151, 183, 838, 870, 1605, 1637 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 262, 294 |
| AluBI | AGCT | 8 cut(s) | 201, 630, 1339, 1493, 1555, 1662, 1832, 1840 |
| AluI | AGCT | 8 cut(s) | 201, 630, 1339, 1493, 1555, 1662, 1832, 1840 |
| Alw21I | GWGCWC | 1 cut(s) | 1664 |
| Alw26I | GTCTC | 2 cut(s) | 210, 1805 |
| AlwI | GGATC | 2 cut(s) | 540, 1725 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 98 |
| Aor13HI | TCCGGA | 1 cut(s) | 493 |
| AoxI | GGCC | 2 cut(s) | 154, 1181 |
| ApeKI | GCWGC | 5 cut(s) | 1007, 1211, 1277, 1555, 1705 |
| ApoI | RAATTY | 5 cut(s) | 299, 561, 825, 864, 1772 |
| AseI | ATTAAT | 1 cut(s) | 119 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 274, 850, 1426 |
| Asp718I | GGTACC | 1 cut(s) | 1382 |
| AspLEI | GCGC | 1 cut(s) | 1197 |
| AspS9I | GGNCC | 3 cut(s) | 413, 1099, 1672 |
| AsuHPI | GGTGA | 4 cut(s) | 122, 497, 821, 1656 |
| AsuNHI | GCTAGC | 1 cut(s) | 1330 |
| AvaII | GGWCC | 3 cut(s) | 413, 1099, 1672 |
| AxyI | CCTNAGG | 1 cut(s) | 1668 |
| BalI | TGGCCA | 1 cut(s) | 1183 |
| BanI | GGYRCC | 1 cut(s) | 1382 |
| BanII | GRGCYC | 2 cut(s) | 191, 1664 |
| BbsI | GAAGAC | 1 cut(s) | 1607 |
| Bbv12I | GWGCWC | 1 cut(s) | 1664 |
| BbvCI | CCTCAGC | 1 cut(s) | 1806 |
| BbvI | GCAGC | 5 cut(s) | 994, 1223, 1264, 1542, 1692 |
| BccI | CCATC | 4 cut(s) | 15, 49, 1583, 1725 |
| BciT130I | CCWGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| BclI | TGATCA | 1 cut(s) | 1822 |
| BcoDI | GTCTC | 2 cut(s) | 210, 1805 |
| BfaI | CTAG | 5 cut(s) | 18, 627, 1292, 1331, 1721 |
| BfmI | CTRYAG | 3 cut(s) | 90, 1494, 1706 |
| BglII | AGATCT | 1 cut(s) | 1150 |
| BisI | GCNGC | 5 cut(s) | 1008, 1212, 1278, 1556, 1706 |
| BlsI | GCNGC | 5 cut(s) | 1009, 1213, 1279, 1557, 1707 |
| Bme1390I | CCNGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| Bme18I | GGWCC | 3 cut(s) | 413, 1099, 1672 |
| BmgT120I | GGNCC | 3 cut(s) | 413, 1099, 1672 |
| BmiI | GGNNCC | 3 cut(s) | 585, 1100, 1384 |
| BmrFI | CCNGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| BmsI | GCATC | 4 cut(s) | 20, 34, 95, 260 |
| BmtI | GCTAGC | 1 cut(s) | 1334 |
| BpiI | GAAGAC | 1 cut(s) | 1607 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 927, 959 |
| BpmI | CTGGAG | 1 cut(s) | 362 |
| Bpu10I | CCTNAGC | 2 cut(s) | 242, 1806 |
| BpuEI | CTTGAG | 2 cut(s) | 1165, 1356 |
| Bsa29I | ATCGAT | 2 cut(s) | 123, 757 |
| BsaI | GGTCTC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 3 cut(s) | 1216, 1386, 1845 |
| BsaWI | WCCGGW | 1 cut(s) | 493 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 262, 292 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 247, 429, 1222, 1316 |
| Bse1I | ACTGG | 4 cut(s) | 1184, 1423, 1486, 1792 |
| Bse21I | CCTNAGG | 1 cut(s) | 1668 |
| Bse3DI | GCAATG | 2 cut(s) | 1197, 1643 |
| BseAI | TCCGGA | 1 cut(s) | 493 |
| BseBI | CCWGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| BseCI | ATCGAT | 2 cut(s) | 123, 757 |
| BseDI | CCNNGG | 3 cut(s) | 1216, 1386, 1845 |
| BseGI | GGATG | 3 cut(s) | 25, 1531, 1594 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 247, 429, 1222, 1316 |
| BseMI | GCAATG | 2 cut(s) | 1197, 1643 |
| BseMII | CTCAG | 9 cut(s) | 233, 960, 1007, 1083, 1118, 1550, 1659, 1728, 1797 |
| BseNI | ACTGG | 4 cut(s) | 1184, 1423, 1486, 1792 |
| BseRI | GAGGAG | 2 cut(s) | 1535, 1823 |
| BseXI | GCAGC | 5 cut(s) | 994, 1223, 1264, 1542, 1692 |
| BsgI | GTGCAG | 2 cut(s) | 1230, 1636 |
| BshFI | GGCC | 2 cut(s) | 156, 1183 |
| BshNI | GGYRCC | 1 cut(s) | 1382 |
| BshVI | ATCGAT | 2 cut(s) | 123, 757 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1664 |
| BsiSI | CCGG | 1 cut(s) | 494 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 247, 429, 1222, 1316 |
| BsmAI | GTCTC | 2 cut(s) | 210, 1805 |
| BsmI | GAATGC | 1 cut(s) | 1010 |
| BsnI | GGCC | 2 cut(s) | 156, 1183 |
| Bso31I | GGTCTC | 1 cut(s) | 210 |
| Bsp1286I | GDGCHC | 2 cut(s) | 191, 1664 |
| Bsp13I | TCCGGA | 1 cut(s) | 493 |
| Bsp1407I | TGTACA | 1 cut(s) | 1079 |
| Bsp143I | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| Bsp19I | CCATGG | 2 cut(s) | 1216, 1386 |
| BspACI | CCGC | 1 cut(s) | 554 |
| BspANI | GGCC | 2 cut(s) | 156, 1183 |
| BspCNI | CTCAG | 9 cut(s) | 234, 959, 1008, 1084, 1119, 1551, 1660, 1729, 1798 |
| BspDI | ATCGAT | 2 cut(s) | 123, 757 |
| BspEI | TCCGGA | 1 cut(s) | 493 |
| BspHI | TCATGA | 1 cut(s) | 1116 |
| BspLI | GGNNCC | 3 cut(s) | 585, 1100, 1384 |
| BspMAI | CTGCAG | 1 cut(s) | 1710 |
| BspOI | GCTAGC | 1 cut(s) | 1334 |
| BspPI | GGATC | 2 cut(s) | 540, 1725 |
| BspQI | GCTCTTC | 1 cut(s) | 661 |
| BspT107I | GGYRCC | 1 cut(s) | 1382 |
| BspTNI | GGTCTC | 1 cut(s) | 210 |
| BsrDI | GCAATG | 2 cut(s) | 1197, 1643 |
| BsrGI | TGTACA | 1 cut(s) | 1079 |
| BsrI | ACTGG | 4 cut(s) | 1184, 1423, 1486, 1792 |
| BssECI | CCNNGG | 3 cut(s) | 1216, 1386, 1845 |
| BssMI | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| BssT1I | CCWWGG | 3 cut(s) | 1216, 1386, 1845 |
| Bst2UI | CCWGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| Bst4CI | ACNGT | 8 cut(s) | 583, 776, 821, 992, 1065, 1265, 1630, 1676 |
| Bst6I | CTCTTC | 5 cut(s) | 581, 661, 685, 919, 1512 |
| BstAUI | TGTACA | 1 cut(s) | 1079 |
| BstC8I | GCNNGC | 2 cut(s) | 1332, 1491 |
| BstDSI | CCRYGG | 2 cut(s) | 1216, 1386 |
| BstF5I | GGATG | 3 cut(s) | 25, 1531, 1594 |
| BstHHI | GCGC | 1 cut(s) | 1197 |
| BstKTI | GATC | 4 cut(s) | 535, 1153, 1720, 1825 |
| BstMAI | GTCTC | 2 cut(s) | 210, 1805 |
| BstMBI | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1208, 1336, 1659 |
| BstNI | CCWGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| BstNSI | RCATGY | 1 cut(s) | 772 |
| BstSCI | CCNGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| BstSFI | CTRYAG | 3 cut(s) | 90, 1494, 1706 |
| BstV1I | GCAGC | 5 cut(s) | 994, 1223, 1264, 1542, 1692 |
| BstV2I | GAAGAC | 1 cut(s) | 1607 |
| BstX2I | RGATCY | 3 cut(s) | 532, 1150, 1717 |
| BstYI | RGATCY | 3 cut(s) | 532, 1150, 1717 |
| Bsu15I | ATCGAT | 2 cut(s) | 123, 757 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1668 |
| BsuRI | GGCC | 2 cut(s) | 156, 1183 |
| BsuTUI | ATCGAT | 2 cut(s) | 123, 757 |
| BtgI | CCRYGG | 2 cut(s) | 1216, 1386 |
| BtsCI | GGATG | 3 cut(s) | 25, 1531, 1594 |
| BtsI | GCAGTG | 1 cut(s) | 972 |
| BtsIMutI | CAGTG | 4 cut(s) | 137, 972, 1416, 1479 |
| Cac8I | GCNNGC | 2 cut(s) | 1332, 1491 |
| CaiI | CAGNNNCTG | 1 cut(s) | 98 |
| CciI | TCATGA | 1 cut(s) | 1116 |
| CfoI | GCGC | 1 cut(s) | 1197 |
| Cfr13I | GGNCC | 3 cut(s) | 413, 1099, 1672 |
| ClaI | ATCGAT | 2 cut(s) | 123, 757 |
| Csp6I | GTAC | 4 cut(s) | 1025, 1080, 1383, 1626 |
| CviQI | GTAC | 4 cut(s) | 1025, 1080, 1383, 1626 |
| DpnI | GATC | 4 cut(s) | 534, 1152, 1719, 1824 |
| DpnII | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| DraI | TTTAAA | 1 cut(s) | 33 |
| EaeI | YGGCCR | 2 cut(s) | 154, 1181 |
| Eam1104I | CTCTTC | 5 cut(s) | 581, 661, 685, 919, 1512 |
| EarI | CTCTTC | 5 cut(s) | 581, 661, 685, 919, 1512 |
| Ecl136II | GAGCTC | 1 cut(s) | 1662 |
| Eco130I | CCWWGG | 3 cut(s) | 1216, 1386, 1845 |
| Eco24I | GRGCYC | 2 cut(s) | 191, 1664 |
| Eco31I | GGTCTC | 1 cut(s) | 210 |
| Eco32I | GATATC | 1 cut(s) | 755 |
| Eco47I | GGWCC | 3 cut(s) | 413, 1099, 1672 |
| Eco53kI | GAGCTC | 1 cut(s) | 1662 |
| Eco57I | CTGAAG | 4 cut(s) | 27, 391, 800, 1413 |
| Eco81I | CCTNAGG | 1 cut(s) | 1668 |
| EcoICRI | GAGCTC | 1 cut(s) | 1662 |
| EcoO109I | RGGNCCY | 2 cut(s) | 413, 1099 |
| EcoRI | GAATTC | 1 cut(s) | 1772 |
| EcoRII | CCWGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| EcoRV | GATATC | 1 cut(s) | 755 |
| EcoT14I | CCWWGG | 3 cut(s) | 1216, 1386, 1845 |
| EcoT38I | GRGCYC | 2 cut(s) | 191, 1664 |
| ErhI | CCWWGG | 3 cut(s) | 1216, 1386, 1845 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 838, 870 |
| FauI | CCCGC | 1 cut(s) | 547 |
| FbaI | TGATCA | 1 cut(s) | 1822 |
| Fnu4HI | GCNGC | 5 cut(s) | 1008, 1212, 1278, 1556, 1706 |
| FokI | GGATG | 3 cut(s) | 12, 1538, 1601 |
| FriOI | GRGCYC | 2 cut(s) | 191, 1664 |
| Fsp4HI | GCNGC | 5 cut(s) | 1008, 1212, 1278, 1556, 1706 |
| FspBI | CTAG | 5 cut(s) | 18, 627, 1292, 1331, 1721 |
| GlaI | GCGC | 1 cut(s) | 1196 |
| GluI | GCNGC | 5 cut(s) | 1008, 1212, 1278, 1556, 1706 |
| GsuI | CTGGAG | 1 cut(s) | 362 |
| HaeIII | GGCC | 2 cut(s) | 156, 1183 |
| HapII | CCGG | 1 cut(s) | 494 |
| HhaI | GCGC | 1 cut(s) | 1197 |
| Hin6I | GCGC | 1 cut(s) | 1195 |
| HinP1I | GCGC | 1 cut(s) | 1195 |
| HincII | GTYRAC | 2 cut(s) | 437, 522 |
| HindII | GTYRAC | 2 cut(s) | 437, 522 |
| HinfI | GANTC | 5 cut(s) | 146, 382, 497, 1054, 1765 |
| HpaII | CCGG | 1 cut(s) | 494 |
| HphI | GGTGA | 4 cut(s) | 122, 497, 821, 1656 |
| Hpy166II | GTNNAC | 4 cut(s) | 437, 522, 931, 1416 |
| Hpy188I | TCNGA | 8 cut(s) | 7, 410, 588, 780, 949, 1093, 1155, 1432 |
| Hpy8I | GTNNAC | 4 cut(s) | 437, 522, 931, 1416 |
| HpyAV | CCTTC | 3 cut(s) | 101, 291, 1267 |
| HpyCH4III | ACNGT | 8 cut(s) | 583, 776, 821, 992, 1065, 1265, 1630, 1676 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1208, 1336, 1659 |
| HspAI | GCGC | 1 cut(s) | 1195 |
| Kpn2I | TCCGGA | 1 cut(s) | 493 |
| KpnI | GGTACC | 1 cut(s) | 1386 |
| Ksp22I | TGATCA | 1 cut(s) | 1822 |
| Kzo9I | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| LguI | GCTCTTC | 1 cut(s) | 661 |
| LmnI | GCTCC | 1 cut(s) | 1744 |
| Lsp1109I | GCAGC | 5 cut(s) | 994, 1223, 1264, 1542, 1692 |
| LweI | GCATC | 4 cut(s) | 20, 34, 95, 260 |
| MaeI | CTAG | 5 cut(s) | 18, 627, 1292, 1331, 1721 |
| MaeIII | GTNAC | 7 cut(s) | 211, 345, 718, 896, 1265, 1363, 1477 |
| MalI | GATC | 4 cut(s) | 534, 1152, 1719, 1824 |
| MboI | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| MfeI | CAATTG | 1 cut(s) | 839 |
| MflI | RGATCY | 3 cut(s) | 532, 1150, 1717 |
| MhlI | GDGCHC | 2 cut(s) | 191, 1664 |
| MlsI | TGGCCA | 1 cut(s) | 1183 |
| MluNI | TGGCCA | 1 cut(s) | 1183 |
| MlyI | GAGTC | 1 cut(s) | 1774 |
| MmeI | TCCRAC | 2 cut(s) | 611, 1703 |
| Mox20I | TGGCCA | 1 cut(s) | 1183 |
| MroI | TCCGGA | 1 cut(s) | 493 |
| MroXI | GAANNNNTTC | 3 cut(s) | 274, 850, 1426 |
| MscI | TGGCCA | 1 cut(s) | 1183 |
| MseI | TTAA | 3 cut(s) | 32, 119, 132 |
| Msp20I | TGGCCA | 1 cut(s) | 1183 |
| MspA1I | CMGCKG | 2 cut(s) | 1339, 1840 |
| MspI | CCGG | 1 cut(s) | 494 |
| MspR9I | CCNGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| MunI | CAATTG | 1 cut(s) | 839 |
| Mva1269I | GAATGC | 1 cut(s) | 1010 |
| MvaI | CCWGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1208, 1336, 1659 |
| NcoI | CCATGG | 2 cut(s) | 1216, 1386 |
| NdeII | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| NheI | GCTAGC | 1 cut(s) | 1330 |
| NlaIV | GGNNCC | 3 cut(s) | 585, 1100, 1384 |
| NmeAIII | GCCGAG | 1 cut(s) | 1486 |
| NmuCI | GTSAC | 4 cut(s) | 211, 718, 1265, 1477 |
| NspI | RCATGY | 1 cut(s) | 772 |
| PagI | TCATGA | 1 cut(s) | 1116 |
| PciSI | GCTCTTC | 1 cut(s) | 661 |
| PctI | GAATGC | 1 cut(s) | 1010 |
| PdmI | GAANNNNTTC | 3 cut(s) | 274, 850, 1426 |
| PfeI | GAWTC | 4 cut(s) | 146, 382, 497, 1054 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 429, 1222 |
| PfoI | TCCNGGA | 1 cut(s) | 321 |
| PkrI | GCNGC | 5 cut(s) | 1009, 1213, 1279, 1557, 1707 |
| PleI | GAGTC | 1 cut(s) | 1773 |
| PpsI | GAGTC | 1 cut(s) | 1773 |
| PpuMI | RGGWCCY | 2 cut(s) | 413, 1099 |
| PshBI | ATTAAT | 1 cut(s) | 119 |
| PsiI | TTATAA | 1 cut(s) | 698 |
| Psp124BI | GAGCTC | 1 cut(s) | 1664 |
| Psp5II | RGGWCCY | 2 cut(s) | 413, 1099 |
| Psp6I | CCWGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| PspGI | CCWGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| PspN4I | GGNNCC | 3 cut(s) | 585, 1100, 1384 |
| PspPI | GGNCC | 3 cut(s) | 413, 1099, 1672 |
| PspPPI | RGGWCCY | 2 cut(s) | 413, 1099 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 598, 630 |
| PstI | CTGCAG | 1 cut(s) | 1710 |
| PstNI | CAGNNNCTG | 1 cut(s) | 98 |
| PsuI | RGATCY | 3 cut(s) | 532, 1150, 1717 |
| PvuII | CAGCTG | 2 cut(s) | 1339, 1840 |
| RsaI | GTAC | 4 cut(s) | 1026, 1081, 1384, 1627 |
| RsaNI | GTAC | 4 cut(s) | 1025, 1080, 1383, 1626 |
| SacI | GAGCTC | 1 cut(s) | 1664 |
| SapI | GCTCTTC | 1 cut(s) | 661 |
| SaqAI | TTAA | 3 cut(s) | 32, 119, 132 |
| SatI | GCNGC | 5 cut(s) | 1008, 1212, 1278, 1556, 1706 |
| Sau3AI | GATC | 4 cut(s) | 532, 1150, 1717, 1822 |
| Sau96I | GGNCC | 3 cut(s) | 413, 1099, 1672 |
| SchI | GAGTC | 1 cut(s) | 1774 |
| ScrFI | CCNGG | 5 cut(s) | 248, 314, 323, 996, 1161 |
| SduI | GDGCHC | 2 cut(s) | 191, 1664 |
| SfaNI | GCATC | 4 cut(s) | 20, 34, 95, 260 |
| SfcI | CTRYAG | 3 cut(s) | 90, 1494, 1706 |
| SinI | GGWCC | 3 cut(s) | 413, 1099, 1672 |
| SmlI | CTYRAG | 2 cut(s) | 1144, 1371 |
| SmoI | CTYRAG | 2 cut(s) | 1144, 1371 |
| SsiI | CCGC | 1 cut(s) | 554 |
| SspI | AATATT | 1 cut(s) | 1409 |
| SspMI | CTAG | 5 cut(s) | 18, 627, 1292, 1331, 1721 |
| SstI | GAGCTC | 1 cut(s) | 1664 |
| StyD4I | CCNGG | 5 cut(s) | 246, 312, 321, 994, 1159 |
| StyI | CCWWGG | 3 cut(s) | 1216, 1386, 1845 |
| TaaI | ACNGT | 8 cut(s) | 583, 776, 821, 992, 1065, 1265, 1630, 1676 |
| TaqI | TCGA | 5 cut(s) | 123, 757, 888, 1344, 1470 |
| TatI | WGTACW | 2 cut(s) | 1024, 1079 |
| TfiI | GAWTC | 4 cut(s) | 146, 382, 497, 1054 |
| Tru1I | TTAA | 3 cut(s) | 32, 119, 132 |
| Tru9I | TTAA | 3 cut(s) | 32, 119, 132 |
| TscAI | CASTG | 4 cut(s) | 144, 972, 1423, 1486 |
| TseFI | GTSAC | 4 cut(s) | 211, 718, 1265, 1477 |
| TseI | GCWGC | 5 cut(s) | 1007, 1211, 1277, 1555, 1705 |
| Tsp45I | GTSAC | 4 cut(s) | 211, 718, 1265, 1477 |
| TspDTI | ATGAA | 7 cut(s) | 528, 1037, 1077, 1105, 1133, 1613, 1626 |
| TspGWI | ACGGA | 1 cut(s) | 1101 |
| TspRI | CASTG | 4 cut(s) | 144, 972, 1423, 1486 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 429, 1222 |
| VpaK11BI | GGWCC | 3 cut(s) | 413, 1099, 1672 |
| VspI | ATTAAT | 1 cut(s) | 119 |
| XapI | RAATTY | 5 cut(s) | 299, 561, 825, 864, 1772 |
| XbaI | TCTAGA | 2 cut(s) | 17, 1291 |
| XceI | RCATGY | 1 cut(s) | 772 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 45, 198 |
| XmnI | GAANNNNTTC | 3 cut(s) | 274, 850, 1426 |
| XspI | CTAG | 5 cut(s) | 18, 627, 1292, 1331, 1721 |