Rw5G029980

Large subunit GTPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0010426
Physical Location & Seq
Forward (+)
47040934 .. 47043899
2966 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G029980.1

Sequence Viewer

Length: 1674 bp
ATGCCGCCGAAGAACGAGAAGACGAAGCTGGGGAGAGCCCTGGTGCGGCAGCACAACCAGTTGATTCGGCAGACCAAAGAGAAAGGCATCATGTATAGAAAGATGCAGAAAGGCATCATGTATAGAAAGATGCAGAAGAAGGGTCTAGAATCCGTCACGGAGGTTAGCCACATCGACGCCGTAATCGAACAGGCCGACAAGGCCGACCGCCTCTTCTCCCTCAACAACCCTAACCCCAATCTTCTCATCAACCTGGACGGGAGTGAGGTATCCCCGCCGGAGCAAAGGAGGGAGCAGCAGAGGAAGGAGGAGGCCTTGCACACCGGTATGGAGGAGCTCGATGACAATGAGAGGCAGGCCTTCTTGGTCTGGCACAGAAGCCTCGCCAGGCTTGAGGAGAATGACAAGCTTGTTCTTACTCCTTTCGAGAAGAACTTGGATATCTGGAGGCAACTGTGGCGTGTCGTTGAGCGTAGCGATTTGCTTGTGATGGTTGTTGATACCCGAGATCCTCTGTTCTACCGCTGCCCTGATCTTGAGGTATATGCACGAGAGGTTGACAAGCACAAAAGGACAATGCTTCTTGTTAATAAAGCAGATCTGTTACCTGTATCTGTTAGAGAGAAGTTGGCAAAATATTTCCGTTCCCAAGAGATACTTTTTGTCTTTTGGTCAGCTAAAGCTGCTTCAGCAGCCATAGAAGGGAAACAACTCAGTTCCCCGTGGAGTACAGAAAATTGCCAGCAGAATTCAGAGGACCCTGATACAAAAATATATGGGAGAGATGAGCTTTTGGTTCGTTTACAGTCTGAGGCAGAAGAGATAGTCAAACTTAGAAGGAACTCGGGATCCAGTGGCACAGTCTCATCCAACATTCGTTCGCAAATTGGAAGTGTATCACCTTCAACTAGTGTTGTTGTGGGCTTTGTTGGTTATCCAAATGTTGGGAAAAGCTCAACAATAAATGCCTTGGTAGGCCAGAAGAAGACAGGCATTACCTCCACTCCTGGGAAGACGAAGCATTTCCAAACATTGATTATATCTGATGCGTTGACACTTTGTGACTGCCCTGGATTAGTGTTTCCATCCTTTTCAAGCTCAAGATATGAGATGATTGCTTGTGGTGTGTTGCCAATTGATCGAATGACTGAAAAGAGGGAGGCTGTGCAGGTAGTGGCTGATCGAGTTCCAAGACATGTTATTGAAAAAGTGTACAATATTGATCTGCCAAAACCCAAATCCTATGAATTGCAATCGCGGCCACCTCTTGCAACTGAACTTATGAGAGCCTACTGTGCCTCTCGTGGGTATGTTGCCTCAAGTGGGCTGCCTGATGAAACTAGAGCTGCCCGTCAATTGTTGAGGGTCTACATTGATGGGAAGCTGCCCCATTATGAAATGCTCCCTGGAATGACAGATGAAGAAGATGATGTGGGACACATCTTGTCTGAACAGCATGAATCAGATTCATCTGATATGGAAAGCCCTCCAGATTCTGATGGTGAAAATGTGCCAGAGATTGATCATAAGCTCAATGCACCTCATAAACAACACAAGAAGCCTCAGAGGAAAAAAGATCACACATGGAGGGTAGGGAATGATGGTGGTTATGGAATGCCGGTAGCAAGAGTCTATCAGAAACCAGTGAACACGGGTCCTGTTAAGGTTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000054 GO:0000166 GO:0001882 GO:0001883 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006403 GO:0006405 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010154 GO:0010467 GO:0010646 GO:0010817 GO:0012505 GO:0015030 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016072 GO:0016462 GO:0016604 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0022414 GO:0022613 GO:0023051 GO:0031503 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032879 GO:0033036 GO:0033750 GO:0034470 GO:0034613 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042254 GO:0042886 GO:0043021 GO:0043022 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045184 GO:0046483 GO:0046626 GO:0046907 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048583 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051049 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0090069 GO:0090070 GO:0090304 GO:0097159 GO:0097367 GO:0099402 GO:1900076 GO:1901265 GO:1901360 GO:1901363 GO:2000012
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

557

Amino Acids

63.09

Weight (kDa)

8.48

Isoelectric Point (pI)

54.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 307 - 367 1.3e-14 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1159
AccB7I CCANNNNNTGG 1 cut(s) 944
AccI GTMKAC 1 cut(s) 1368
AccII CGCG 1 cut(s) 1258
AciI CCGC 6 cut(s) 5, 46, 208, 275, 523, 1258
AclWI GGATC 3 cut(s) 503, 843, 856
AcoI YGGCCR 1 cut(s) 1259
AcsI RAATTY 1 cut(s) 748
AcuI CTGAAG 1 cut(s) 672
AcyI GRCGYC 1 cut(s) 177
AdeI CACNNNGTG 1 cut(s) 1061
AfaI GTAC 2 cut(s) 730, 1214
AfiI CCNNNNNNNGG 6 cut(s) 45, 702, 944, 1008, 1305, 1323
AflIII ACRYGT 1 cut(s) 1195
AgeI ACCGGT 1 cut(s) 323
AgsI TTSAA 3 cut(s) 906, 1095, 1205
AhlI ACTAGT 1 cut(s) 908
AjnI CCWGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
AloI GAACNNNNNNTCC 2 cut(s) 833, 865
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 1 cut(s) 868
AlwI GGATC 3 cut(s) 503, 843, 856
AlwNI CAGNNNCTG 1 cut(s) 1496
Ama87I CYCGRG 2 cut(s) 504, 844
AoxI GGCC 6 cut(s) 192, 201, 312, 357, 976, 1259
ApeKI GCWGC 8 cut(s) 49, 295, 525, 683, 692, 1327, 1346, 1384
ApoI RAATTY 1 cut(s) 748
AsiGI ACCGGT 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 1022
AspS9I GGNCC 2 cut(s) 757, 1655
AsuHPI GGTGA 2 cut(s) 891, 1514
AvaI CYCGRG 2 cut(s) 504, 844
AvaII GGWCC 2 cut(s) 757, 1655
BamHI GGATCC 1 cut(s) 848
BanII GRGCYC 2 cut(s) 40, 339
BauI CACGAG 2 cut(s) 549, 1302
BbsI GAAGAC 3 cut(s) 26, 992, 1019
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 8 cut(s) 61, 307, 512, 670, 704, 1314, 1333, 1371
BccI CCATC 5 cut(s) 484, 1093, 1370, 1493, 1595
BceAI ACGGC 1 cut(s) 164
BciT130I CCWGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
BciVI GTATCC 1 cut(s) 280
BclI TGATCA 1 cut(s) 1522
BcoDI GTCTC 1 cut(s) 868
BcuI ACTAGT 1 cut(s) 908
BfaI CTAG 3 cut(s) 146, 909, 1341
BfuAI ACCTGC 1 cut(s) 1159
BfuI GTATCC 1 cut(s) 280
BglI GCCNNNNNGGC 1 cut(s) 200
BglII AGATCT 1 cut(s) 598
Bme1390I CCNGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
Bme18I GGWCC 2 cut(s) 757, 1655
BmeT110I CYCGRG 2 cut(s) 504, 844
BmgT120I GGNCC 2 cut(s) 757, 1655
BmiI GGNNCC 3 cut(s) 759, 850, 1656
BmrFI CCNGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
BmsI GCATC 5 cut(s) 93, 96, 120, 123, 1036
BpiI GAAGAC 3 cut(s) 26, 992, 1019
BpmI CTGGAG 2 cut(s) 466, 1473
BpuEI CTTGAG 4 cut(s) 413, 557, 1084, 1303
BsaHI GRCGYC 1 cut(s) 177
BsaJI CCNNGG 6 cut(s) 39, 722, 969, 1007, 1069, 1405
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 988, 1018
Bsc4I CCNNNNNNNGG 6 cut(s) 45, 702, 944, 1008, 1305, 1323
Bse118I RCCGGY 2 cut(s) 323, 1618
Bse1I ACTGG 3 cut(s) 58, 852, 1643
BseBI CCWGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
BseDI CCNNGG 6 cut(s) 39, 722, 969, 1007, 1069, 1405
BseGI GGATG 2 cut(s) 866, 1085
BseLI CCNNNNNNNGG 6 cut(s) 45, 702, 944, 1008, 1305, 1323
BseMII CTCAG 3 cut(s) 727, 801, 1577
BseNI ACTGG 3 cut(s) 58, 852, 1643
BseRI GAGGAG 3 cut(s) 323, 347, 410
BseXI GCAGC 8 cut(s) 61, 307, 512, 670, 704, 1314, 1333, 1371
BseYI CCCAGC 1 cut(s) 28
BsgI GTGCAG 1 cut(s) 1187
Bsh1236I CGCG 1 cut(s) 1258
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 6 cut(s) 194, 203, 314, 359, 978, 1261
BshTI ACCGGT 1 cut(s) 323
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 1 cut(s) 339
BsiHKCI CYCGRG 2 cut(s) 504, 844
BsiSI CCGG 3 cut(s) 278, 324, 1619
BslFI GGGAC 1 cut(s) 1449
BslI CCNNNNNNNGG 6 cut(s) 45, 702, 944, 1008, 1305, 1323
BsmAI GTCTC 1 cut(s) 868
BsmFI GGGAC 1 cut(s) 1449
BsmI GAATGC 1 cut(s) 1620
BsnI GGCC 6 cut(s) 194, 203, 314, 359, 978, 1261
BsoBI CYCGRG 2 cut(s) 504, 844
Bsp1286I GDGCHC 2 cut(s) 40, 339
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
BspACI CCGC 6 cut(s) 5, 46, 208, 275, 523, 1258
BspANI GGCC 6 cut(s) 194, 203, 314, 359, 978, 1261
BspCNI CTCAG 3 cut(s) 726, 802, 1576
BspFNI CGCG 1 cut(s) 1258
BspLI GGNNCC 3 cut(s) 759, 850, 1656
BspMI ACCTGC 1 cut(s) 1159
BspPI GGATC 3 cut(s) 503, 843, 856
BsrFI RCCGGY 2 cut(s) 323, 1618
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 3 cut(s) 58, 852, 1643
BssAI RCCGGY 2 cut(s) 323, 1618
BssECI CCNNGG 6 cut(s) 39, 722, 969, 1007, 1069, 1405
BssMI GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
BssNI GRCGYC 1 cut(s) 177
BssSI CACGAG 2 cut(s) 549, 1302
BssT1I CCWWGG 1 cut(s) 969
Bst2BI CACGAG 2 cut(s) 549, 1302
Bst2UI CCWGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
Bst4CI ACNGT 4 cut(s) 456, 807, 862, 1295
Bst6I CTCTTC 2 cut(s) 218, 813
BstACI GRCGYC 1 cut(s) 177
BstAUI TGTACA 1 cut(s) 1212
BstC8I GCNNGC 2 cut(s) 357, 743
BstDEI CTNAG 4 cut(s) 713, 810, 833, 1563
BstDSI CCRYGG 1 cut(s) 722
BstF5I GGATG 2 cut(s) 866, 1085
BstFNI CGCG 1 cut(s) 1258
BstKTI GATC 9 cut(s) 511, 535, 601, 851, 1141, 1183, 1225, 1525, 1579
BstMAI GTCTC 1 cut(s) 868
BstMBI GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 7 cut(s) 200, 457, 683, 689, 692, 1258, 1295
BstNI CCWGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
BstNSI RCATGY 1 cut(s) 1199
BstSCI CCNGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
BstUI CGCG 1 cut(s) 1258
BstV1I GCAGC 8 cut(s) 61, 307, 512, 670, 704, 1314, 1333, 1371
BstV2I GAAGAC 3 cut(s) 26, 992, 1019
BstX2I RGATCY 3 cut(s) 508, 598, 848
BstYI RGATCY 3 cut(s) 508, 598, 848
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 6 cut(s) 194, 203, 314, 359, 978, 1261
BtgI CCRYGG 1 cut(s) 722
BtsCI GGATG 2 cut(s) 866, 1085
BtsIMutI CAGTG 2 cut(s) 859, 1650
BveI ACCTGC 1 cut(s) 1159
Cac8I GCNNGC 2 cut(s) 357, 743
CaiI CAGNNNCTG 1 cut(s) 1496
Cfr10I RCCGGY 2 cut(s) 323, 1618
Cfr13I GGNCC 2 cut(s) 757, 1655
CseI GACGC 1 cut(s) 185
Csp6I GTAC 2 cut(s) 729, 1213
CspAI ACCGGT 1 cut(s) 323
CviAII CATG 5 cut(s) 91, 118, 1196, 1457, 1584
CviQI GTAC 2 cut(s) 729, 1213
DdeI CTNAG 4 cut(s) 713, 810, 833, 1563
DpnI GATC 9 cut(s) 510, 534, 600, 850, 1140, 1182, 1224, 1524, 1578
DpnII GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
DraIII CACNNNGTG 1 cut(s) 1061
EaeI YGGCCR 1 cut(s) 1259
Eam1104I CTCTTC 2 cut(s) 218, 813
EarI CTCTTC 2 cut(s) 218, 813
Ecl136II GAGCTC 1 cut(s) 337
Eco130I CCWWGG 1 cut(s) 969
Eco147I AGGCCT 2 cut(s) 314, 359
Eco24I GRGCYC 2 cut(s) 40, 339
Eco32I GATATC 1 cut(s) 442
Eco47I GGWCC 2 cut(s) 757, 1655
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 1 cut(s) 672
Eco88I CYCGRG 2 cut(s) 504, 844
EcoICRI GAGCTC 1 cut(s) 337
EcoO109I RGGNCCY 2 cut(s) 757, 1655
EcoRI GAATTC 1 cut(s) 748
EcoRII CCWGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
EcoRV GATATC 1 cut(s) 442
EcoT14I CCWWGG 1 cut(s) 969
EcoT38I GRGCYC 2 cut(s) 40, 339
ErhI CCWWGG 1 cut(s) 969
FaeI CATG 5 cut(s) 94, 121, 1199, 1460, 1587
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FaqI GGGAC 1 cut(s) 1449
FatI CATG 5 cut(s) 90, 117, 1195, 1456, 1583
FauI CCCGC 1 cut(s) 282
FbaI TGATCA 1 cut(s) 1522
FblI GTMKAC 1 cut(s) 1368
FokI GGATG 2 cut(s) 853, 1072
FriOI GRGCYC 2 cut(s) 40, 339
FspBI CTAG 3 cut(s) 146, 909, 1341
GsaI CCCAGC 1 cut(s) 32
GsuI CTGGAG 2 cut(s) 466, 1473
HaeIII GGCC 6 cut(s) 194, 203, 314, 359, 978, 1261
HapII CCGG 3 cut(s) 278, 324, 1619
HgaI GACGC 1 cut(s) 185
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 5 cut(s) 94, 121, 1199, 1460, 1587
HincII GTYRAC 2 cut(s) 559, 1053
HindII GTYRAC 2 cut(s) 559, 1053
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 6 cut(s) 64, 149, 1460, 1466, 1493, 1629
HpaII CCGG 3 cut(s) 278, 324, 1619
HphI GGTGA 2 cut(s) 891, 1514
Hpy166II GTNNAC 6 cut(s) 559, 803, 1053, 1213, 1369, 1648
Hpy188I TCNGA 9 cut(s) 754, 811, 1045, 1450, 1465, 1474, 1498, 1566, 1638
Hpy188III TCNNGA 7 cut(s) 146, 427, 445, 536, 846, 1101, 1490
Hpy8I GTNNAC 6 cut(s) 559, 803, 1053, 1213, 1369, 1648
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 6 cut(s) 133, 298, 370, 695, 831, 912
HpyCH4III ACNGT 4 cut(s) 456, 807, 862, 1295
HpyCH4V TGCA 8 cut(s) 106, 133, 319, 548, 1168, 1252, 1271, 1538
HpyF10VI GCNNNNNNNGC 7 cut(s) 200, 457, 683, 689, 692, 1258, 1295
HpyF3I CTNAG 4 cut(s) 713, 810, 833, 1563
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 5 cut(s) 94, 121, 1199, 1460, 1587
Ksp22I TGATCA 1 cut(s) 1522
Kzo9I GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
LmnI GCTCC 4 cut(s) 280, 292, 334, 1407
Lsp1109I GCAGC 8 cut(s) 61, 307, 512, 670, 704, 1314, 1333, 1371
LweI GCATC 5 cut(s) 93, 96, 120, 123, 1036
MaeI CTAG 3 cut(s) 146, 909, 1341
MaeIII GTNAC 3 cut(s) 154, 603, 1061
MalI GATC 9 cut(s) 510, 534, 600, 850, 1140, 1182, 1224, 1524, 1578
MboI GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
MfeI CAATTG 2 cut(s) 1134, 1355
MflI RGATCY 3 cut(s) 508, 598, 848
MhlI GDGCHC 2 cut(s) 40, 339
MluCI AATT 6 cut(s) 736, 748, 885, 1134, 1247, 1355
MlyI GAGTC 1 cut(s) 1638
MmeI TCCRAC 2 cut(s) 894, 1648
MroXI GAANNNNTTC 1 cut(s) 1022
MseI TTAA 2 cut(s) 588, 1662
MslI CAYNNNNRTG 1 cut(s) 326
MspA1I CMGCKG 1 cut(s) 525
MspI CCGG 3 cut(s) 278, 324, 1619
MspR9I CCNGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
MunI CAATTG 2 cut(s) 1134, 1355
Mva1269I GAATGC 1 cut(s) 1620
MvaI CCWGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
MvnI CGCG 1 cut(s) 1258
MwoI GCNNNNNNNGC 7 cut(s) 200, 457, 683, 689, 692, 1258, 1295
NdeII GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
NlaIII CATG 5 cut(s) 94, 121, 1199, 1460, 1587
NlaIV GGNNCC 3 cut(s) 759, 850, 1656
NmuCI GTSAC 2 cut(s) 154, 1061
NspI RCATGY 1 cut(s) 1199
PceI AGGCCT 2 cut(s) 314, 359
PciI ACATGT 1 cut(s) 1195
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 192
PctI GAATGC 1 cut(s) 1620
PdmI GAANNNNTTC 1 cut(s) 1022
PfeI GAWTC 5 cut(s) 64, 149, 1460, 1466, 1493
PflMI CCANNNNNTGG 1 cut(s) 944
PinAI ACCGGT 1 cut(s) 323
PleI GAGTC 1 cut(s) 1637
PpsI GAGTC 1 cut(s) 1637
PpuMI RGGWCCY 2 cut(s) 757, 1655
PscI ACATGT 1 cut(s) 1195
Psp124BI GAGCTC 1 cut(s) 339
Psp5II RGGWCCY 2 cut(s) 757, 1655
Psp6I CCWGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
PspN4I GGNNCC 3 cut(s) 759, 850, 1656
PspPI GGNCC 2 cut(s) 757, 1655
PspPPI RGGWCCY 2 cut(s) 757, 1655
PstNI CAGNNNCTG 1 cut(s) 1496
PsuI RGATCY 3 cut(s) 508, 598, 848
RsaI GTAC 2 cut(s) 730, 1214
RsaNI GTAC 2 cut(s) 729, 1213
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 1 cut(s) 339
SaqAI TTAA 2 cut(s) 588, 1662
Sau3AI GATC 9 cut(s) 508, 532, 598, 848, 1138, 1180, 1222, 1522, 1576
Sau96I GGNCC 2 cut(s) 757, 1655
SchI GAGTC 1 cut(s) 1638
ScrFI CCNGG 6 cut(s) 41, 254, 388, 1008, 1071, 1407
SduI GDGCHC 2 cut(s) 40, 339
SfaNI GCATC 5 cut(s) 93, 96, 120, 123, 1036
SfiI GGCCNNNNNGGCC 1 cut(s) 200
SinI GGWCC 2 cut(s) 757, 1655
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 4 cut(s) 392, 536, 1099, 1318
SmoI CTYRAG 4 cut(s) 392, 536, 1099, 1318
SpeI ACTAGT 1 cut(s) 908
Sse9I AATT 6 cut(s) 736, 748, 885, 1134, 1247, 1355
SseBI AGGCCT 2 cut(s) 314, 359
SsiI CCGC 6 cut(s) 5, 46, 208, 275, 523, 1258
SspI AATATT 2 cut(s) 638, 1219
SspMI CTAG 3 cut(s) 146, 909, 1341
SstI GAGCTC 1 cut(s) 339
StuI AGGCCT 2 cut(s) 314, 359
StyD4I CCNGG 6 cut(s) 39, 252, 386, 1006, 1069, 1405
StyI CCWWGG 1 cut(s) 969
TaaI ACNGT 4 cut(s) 456, 807, 862, 1295
TaqI TCGA 6 cut(s) 174, 186, 339, 426, 1141, 1183
TasI AATT 6 cut(s) 736, 748, 885, 1134, 1247, 1355
TatI WGTACW 2 cut(s) 728, 1212
TauI GCSGC 3 cut(s) 7, 49, 1261
TfiI GAWTC 5 cut(s) 64, 149, 1460, 1466, 1493
Tru1I TTAA 2 cut(s) 588, 1662
Tru9I TTAA 2 cut(s) 588, 1662
TscAI CASTG 2 cut(s) 859, 1650
TseFI GTSAC 2 cut(s) 154, 1061
TseI GCWGC 8 cut(s) 49, 295, 525, 683, 692, 1327, 1346, 1384
Tsp45I GTSAC 2 cut(s) 154, 1061
TspDTI ATGAA 6 cut(s) 1260, 1350, 1410, 1434, 1458, 1473
TspGWI ACGGA 3 cut(s) 142, 173, 632
TspRI CASTG 2 cut(s) 859, 1650
Van91I CCANNNNNTGG 1 cut(s) 944
VpaK11BI GGWCC 2 cut(s) 757, 1655
XapI RAATTY 1 cut(s) 748
XbaI TCTAGA 1 cut(s) 145
XceI RCATGY 1 cut(s) 1199
XmiI GTMKAC 1 cut(s) 1368
XmnI GAANNNNTTC 1 cut(s) 1022
XspI CTAG 3 cut(s) 146, 909, 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.