FvH4_3g28690

dihydrokaempferol 4-reductase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
21663887 .. 21667165
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28690.t2

Sequence Viewer

Length: 1563 bp
ATGTCTTTCACAACGACAGTAACAGCAACAAGGAGGCCGAAACGGCTTTACCCACCAGCCCCACCGACCCCAAAGATCCTCCATTTGCCACGTAGGCCTCGCCGGAGAACACCCAAGAGCAGCGTCGCCGCCTTTCATGGAAAACCAGCCCCACCCACTTCGGTGGAGGACAACAAGGGCAAGCTGGTGGCTCTGTTTGACCAAGAACGAGTCTTTTCCAAAGATGGGTTTCCAATAGTGCTTGTGGAGACTGAGAGGAGGAGAGAGAGAGTCAGTGAGGAGGAGGGTGGCGGTGCTGACGTGGAGGTGGCGGAAGAGGAGAAGTGGAGGTTTCAGGCGGAGATGTTGAGGGCAGAGTGCAATTTGTTGAGGATGGAGAAGGAGATTGTGGTGAAGAAGATGGAGAGGATCAGAGTTAAAATGGAGAGGACTCTTAATTCAGCTGTGCACACTCTTGTTTCTGGGAGAAAAAAGATTAGTGAAGGAAGGAATGCAACTATGGTTTTGGAGGAAGAGATTCAGCAACTGGTTCAGAAGCTAGAGAAGTTGCAAAGGAATTTAGGAGCCAAGGGCATGAAGGTTAGGAAGTCTAGTAACTTGGACAAACAAGCTTGTCTTCTTCAAAGACGGTTAGAGAAGTTTAGAGGAACATCGGATGAAATATGTGTGAAGGAGATCCAGGAGATGGCAGAAGCAAGCTTGTCAATCAAACCAAGCTATAGAAGAACTGATGACAACTTAGTTTCAAGTGGTAAAAGCAATACCATGCAGGTGGAGATTCTGAGAAGGAGAATGGAGGGGTTGTCAAATGGGATGCTATTAAAGAGGATGAAGGAGGAGTATGGTTCAATGCTTTCTACAGCCAACAACTCTGTTGCCAGTTCTGCCTCCTCGTCCAAGAGAATCGAATCCACCGATTTGTCTTCTTCCTTGGAGAAAGAATCTCATGATGAGAAAGTATGCTCTGGACGTTGCAAGGCTATTGTTCGAAGGATAGTAGAACAAGTACGAGCTGAGACAGAGCAATGGTCTCAGATGCAGGAAATGCTTGGGCAGGTGAGGGAGGAGATGGAGGAACTGCAGGCCTCTCGAGACTTTTGGGAAGAGCGAGCCCTAGACTCTGATTATCACATCCAGTCCCTGACGTCTACTGTGCAAGAATGGAGGGAGAAAGCTGTTTCATCTGAAAGCAAAGCAAGGGGGCTGCAAGAACAAGTATCATCACTCCATGTGGAGCTAAATAGCTTGAGGAAAGGTGAAAAAACAAAATTAAAGAAGGAGAATCGCTCACCTAATCCCTGGGATCCGCAGAACGAAATGGAAAAACGGGTTTTGATTTGTCACTTGAAGGAAAATCATTGTACCAAAGAATACAGCAGCAAGCAAAGAGAGGCTTTACTTGAGAGTAAGGGAAAACCGGACTCATGCACCAATAGAACACCTATTGCTCCCCATGCTCTGAAAATATCACCATTTCGAGATATTGGAAATTCCTCAATGTCATTGAGGCAACACAGCAGAGCAGTCTTCCCTTTGCATTGTCCTCTACCTTTCAAAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

521

Amino Acids

59.55

Weight (kDa)

9.5

Isoelectric Point (pI)

64.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 760, 1045
AatII GACGTC 1 cut(s) 1148
Acc36I ACCTGC 2 cut(s) 760, 1045
AccB7I CCANNNNNTGG 1 cut(s) 685
AccI GTMKAC 1 cut(s) 1148
AciI CCGC 5 cut(s) 129, 291, 311, 338, 1307
AclWI GGATC 5 cut(s) 70, 416, 670, 1298, 1311
AcsI RAATTY 2 cut(s) 556, 1489
AcyI GRCGYC 1 cut(s) 1145
AfaI GTAC 2 cut(s) 1008, 1363
AfiI CCNNNNNNNGG 2 cut(s) 225, 685
AgsI TTSAA 5 cut(s) 623, 747, 849, 1348, 1555
AjiI CACGTC 1 cut(s) 301
AjnI CCWGG 2 cut(s) 678, 1298
AleI CACNNNNGTG 1 cut(s) 161
Alw21I GWGCWC 1 cut(s) 450
Alw26I GTCTC 4 cut(s) 242, 1010, 1035, 1086
Alw44I GTGCAC 1 cut(s) 446
AlwI GGATC 5 cut(s) 70, 416, 670, 1298, 1311
AlwNI CAGNNNCTG 2 cut(s) 526, 1141
Ama87I CYCGRG 1 cut(s) 1089
AoxI GGCC 3 cut(s) 35, 95, 1083
ApaLI GTGCAC 1 cut(s) 446
ApeKI GCWGC 3 cut(s) 120, 1204, 1377
ApoI RAATTY 2 cut(s) 556, 1489
Asp700I GAANNNNTTC 1 cut(s) 516
AsuHPI GGTGA 5 cut(s) 403, 1069, 1268, 1281, 1461
AsuII TTCGAA 1 cut(s) 988
AvaI CYCGRG 1 cut(s) 1089
BaeGI GKGCMC 1 cut(s) 450
BamHI GGATCC 1 cut(s) 1303
BanII GRGCYC 1 cut(s) 1114
BbsI GAAGAC 3 cut(s) 608, 915, 1519
Bbv12I GWGCWC 1 cut(s) 450
BbvI GCAGC 3 cut(s) 132, 1191, 1389
BccI CCATC 5 cut(s) 218, 367, 394, 679, 1063
BceAI ACGGC 1 cut(s) 59
BcgI CGANNNNNNTGC 2 cut(s) 1070, 1104
BciT130I CCWGG 2 cut(s) 680, 1300
BcoDI GTCTC 4 cut(s) 242, 1010, 1035, 1086
BfaI CTAG 3 cut(s) 539, 591, 1115
BfmI CTRYAG 3 cut(s) 718, 858, 1079
BfuAI ACCTGC 2 cut(s) 760, 1045
BglI GCCNNNNNGGC 2 cut(s) 43, 94
BisI GCNGC 4 cut(s) 121, 129, 1205, 1378
BlsI GCNGC 4 cut(s) 122, 130, 1206, 1379
Bme1390I CCNGG 2 cut(s) 680, 1300
BmeT110I CYCGRG 1 cut(s) 1089
BmgBI CACGTC 1 cut(s) 301
BmiI GGNNCC 2 cut(s) 565, 1305
BmrFI CCNGG 2 cut(s) 680, 1300
BmsI GCATC 2 cut(s) 804, 1026
BpiI GAAGAC 3 cut(s) 608, 915, 1519
BplI GAGNNNNNCTC 2 cut(s) 1271, 1303
Bpu14I TTCGAA 1 cut(s) 988
BpuEI CTTGAG 2 cut(s) 1267, 1421
BsaAI YACGTR 1 cut(s) 92
BsaHI GRCGYC 1 cut(s) 1145
BsaI GGTCTC 1 cut(s) 1035
BsaJI CCNNGG 4 cut(s) 567, 930, 1298, 1299
BsaWI WCCGGW 1 cut(s) 1417
BsaXI ACNNNNNCTCC 2 cut(s) 788, 818
Bsc4I CCNNNNNNNGG 2 cut(s) 225, 685
Bse1I ACTGG 3 cut(s) 531, 879, 1135
Bse3DI GCAATG 1 cut(s) 1031
BseBI CCWGG 2 cut(s) 680, 1300
BseDI CCNNGG 4 cut(s) 567, 930, 1298, 1299
BseGI GGATG 5 cut(s) 378, 661, 819, 834, 1131
BseLI CCNNNNNNNGG 2 cut(s) 225, 685
BseMI GCAATG 1 cut(s) 1031
BseMII CTCAG 4 cut(s) 243, 773, 1005, 1046
BseNI ACTGG 3 cut(s) 531, 879, 1135
BseRI GAGGAG 8 cut(s) 271, 274, 293, 296, 332, 851, 880, 1079
BseSI GKGCMC 1 cut(s) 450
BseXI GCAGC 3 cut(s) 132, 1191, 1389
BshFI GGCC 3 cut(s) 37, 97, 1085
BsiHKAI GWGCWC 1 cut(s) 450
BsiHKCI CYCGRG 1 cut(s) 1089
BsiSI CCGG 2 cut(s) 103, 1418
BslFI GGGAC 1 cut(s) 1123
BslI CCNNNNNNNGG 2 cut(s) 225, 685
BsmAI GTCTC 4 cut(s) 242, 1010, 1035, 1086
BsmFI GGGAC 1 cut(s) 1123
BsmI GAATGC 1 cut(s) 496
BsnI GGCC 3 cut(s) 37, 97, 1085
Bso31I GGTCTC 1 cut(s) 1035
BsoBI CYCGRG 1 cut(s) 1089
Bsp119I TTCGAA 1 cut(s) 988
Bsp1286I GDGCHC 2 cut(s) 450, 1114
Bsp143I GATC 4 cut(s) 75, 408, 675, 1303
BspACI CCGC 5 cut(s) 129, 291, 311, 338, 1307
BspANI GGCC 3 cut(s) 37, 97, 1085
BspCNI CTCAG 4 cut(s) 244, 774, 1006, 1045
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 2 cut(s) 565, 1305
BspMAI CTGCAG 1 cut(s) 1083
BspMI ACCTGC 2 cut(s) 760, 1045
BspPI GGATC 5 cut(s) 70, 416, 670, 1298, 1311
BspQI GCTCTTC 1 cut(s) 1098
BspT104I TTCGAA 1 cut(s) 988
BspTNI GGTCTC 1 cut(s) 1035
BsrDI GCAATG 1 cut(s) 1031
BsrI ACTGG 3 cut(s) 531, 879, 1135
BssECI CCNNGG 4 cut(s) 567, 930, 1298, 1299
BssMI GATC 4 cut(s) 75, 408, 675, 1303
BssNI GRCGYC 1 cut(s) 1145
BssT1I CCWWGG 2 cut(s) 567, 930
Bst2UI CCWGG 2 cut(s) 680, 1300
Bst4CI ACNGT 3 cut(s) 19, 630, 1153
Bst6I CTCTTC 3 cut(s) 309, 507, 1098
BstACI GRCGYC 1 cut(s) 1145
BstAPI GCANNNNNTGC 1 cut(s) 1045
BstBAI YACGTR 1 cut(s) 92
BstBI TTCGAA 1 cut(s) 988
BstC8I GCNNGC 5 cut(s) 182, 697, 1083, 1110, 1382
BstDEI CTNAG 5 cut(s) 252, 739, 782, 1014, 1032
BstF5I GGATG 5 cut(s) 378, 661, 819, 834, 1131
BstKTI GATC 4 cut(s) 78, 411, 678, 1306
BstMAI GTCTC 4 cut(s) 242, 1010, 1035, 1086
BstMBI GATC 4 cut(s) 75, 408, 675, 1303
BstMWI GCNNNNNNNGC 5 cut(s) 43, 94, 884, 1045, 1454
BstNI CCWGG 2 cut(s) 680, 1300
BstSCI CCNGG 2 cut(s) 678, 1298
BstSFI CTRYAG 3 cut(s) 718, 858, 1079
BstSLI GKGCMC 1 cut(s) 450
BstV1I GCAGC 3 cut(s) 132, 1191, 1389
BstV2I GAAGAC 3 cut(s) 608, 915, 1519
BstX2I RGATCY 3 cut(s) 75, 675, 1303
BstXI CCANNNNNNTGG 2 cut(s) 163, 772
BstYI RGATCY 3 cut(s) 75, 675, 1303
BsuRI GGCC 3 cut(s) 37, 97, 1085
BtrI CACGTC 1 cut(s) 301
BtsCI GGATG 5 cut(s) 378, 661, 819, 834, 1131
BtsIMutI CAGTG 1 cut(s) 280
BveI ACCTGC 2 cut(s) 760, 1045
Cac8I GCNNGC 5 cut(s) 182, 697, 1083, 1110, 1382
CaiI CAGNNNCTG 2 cut(s) 526, 1141
CciI TCATGA 1 cut(s) 946
CseI GACGC 1 cut(s) 112
Csp6I GTAC 2 cut(s) 1007, 1362
CviAII CATG 7 cut(s) 137, 574, 766, 947, 1229, 1425, 1454
CviQI GTAC 2 cut(s) 1007, 1362
DdeI CTNAG 5 cut(s) 252, 739, 782, 1014, 1032
DpnI GATC 4 cut(s) 77, 410, 677, 1305
DpnII GATC 4 cut(s) 75, 408, 675, 1303
Eam1104I CTCTTC 3 cut(s) 309, 507, 1098
EarI CTCTTC 3 cut(s) 309, 507, 1098
EciI GGCGGA 2 cut(s) 326, 353
Eco130I CCWWGG 2 cut(s) 567, 930
Eco147I AGGCCT 2 cut(s) 97, 1085
Eco24I GRGCYC 1 cut(s) 1114
Eco31I GGTCTC 1 cut(s) 1035
Eco88I CYCGRG 1 cut(s) 1089
EcoRII CCWGG 2 cut(s) 678, 1298
EcoT14I CCWWGG 2 cut(s) 567, 930
EcoT38I GRGCYC 1 cut(s) 1114
ErhI CCWWGG 2 cut(s) 567, 930
FaeI CATG 7 cut(s) 140, 577, 769, 950, 1232, 1428, 1457
FalI AAGNNNNNCTT 4 cut(s) 600, 632, 1378, 1410
FaqI GGGAC 1 cut(s) 1123
FatI CATG 7 cut(s) 136, 573, 765, 946, 1228, 1424, 1453
FblI GTMKAC 1 cut(s) 1148
Fnu4HI GCNGC 4 cut(s) 121, 129, 1205, 1378
FokI GGATG 5 cut(s) 385, 668, 826, 841, 1118
FriOI GRGCYC 1 cut(s) 1114
Fsp4HI GCNGC 4 cut(s) 121, 129, 1205, 1378
FspBI CTAG 3 cut(s) 539, 591, 1115
GluI GCNGC 4 cut(s) 121, 129, 1205, 1378
HaeIII GGCC 3 cut(s) 37, 97, 1085
HapII CCGG 2 cut(s) 103, 1418
HgaI GACGC 1 cut(s) 112
Hin1I GRCGYC 1 cut(s) 1145
Hin1II CATG 7 cut(s) 140, 577, 769, 950, 1232, 1428, 1457
HindIII AAGCTT 2 cut(s) 609, 697
HpaII CCGG 2 cut(s) 103, 1418
HphI GGTGA 5 cut(s) 403, 1069, 1268, 1281, 1461
Hpy166II GTNNAC 2 cut(s) 448, 1149
Hpy188I TCNGA 8 cut(s) 413, 534, 655, 783, 1035, 1123, 1186, 1461
Hpy188III TCNNGA 5 cut(s) 947, 966, 1089, 1091, 1478
Hpy8I GTNNAC 2 cut(s) 448, 1149
Hpy99I CGWCG 1 cut(s) 128
HpyCH4III ACNGT 3 cut(s) 19, 630, 1153
HpyCH4IV ACGT 4 cut(s) 91, 300, 970, 1145
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 94, 884, 1045, 1454
HpyF3I CTNAG 5 cut(s) 252, 739, 782, 1014, 1032
HpySE526I ACGT 4 cut(s) 91, 300, 970, 1145
Hsp92I GRCGYC 1 cut(s) 1145
Hsp92II CATG 7 cut(s) 140, 577, 769, 950, 1232, 1428, 1457
Kzo9I GATC 4 cut(s) 75, 408, 675, 1303
LguI GCTCTTC 1 cut(s) 1098
LmnI GCTCC 3 cut(s) 563, 1234, 1453
Lsp1109I GCAGC 3 cut(s) 132, 1191, 1389
LweI GCATC 2 cut(s) 804, 1026
MaeI CTAG 3 cut(s) 539, 591, 1115
MaeII ACGT 4 cut(s) 91, 300, 970, 1145
MaeIII GTNAC 3 cut(s) 19, 593, 1340
MalI GATC 4 cut(s) 77, 410, 677, 1305
MboI GATC 4 cut(s) 75, 408, 675, 1303
MflI RGATCY 3 cut(s) 75, 675, 1303
MhlI GDGCHC 2 cut(s) 450, 1114
MluCI AATT 5 cut(s) 361, 436, 556, 1268, 1489
MlyI GAGTC 5 cut(s) 219, 279, 424, 1112, 1415
MroXI GAANNNNTTC 1 cut(s) 516
MseI TTAA 5 cut(s) 417, 435, 821, 1271, 1561
MslI CAYNNNNRTG 2 cut(s) 161, 770
MspA1I CMGCKG 1 cut(s) 443
MspI CCGG 2 cut(s) 103, 1418
MspR9I CCNGG 2 cut(s) 680, 1300
Mva1269I GAATGC 1 cut(s) 496
MvaI CCWGG 2 cut(s) 680, 1300
MwoI GCNNNNNNNGC 5 cut(s) 43, 94, 884, 1045, 1454
NdeII GATC 4 cut(s) 75, 408, 675, 1303
NlaIII CATG 7 cut(s) 140, 577, 769, 950, 1232, 1428, 1457
NlaIV GGNNCC 2 cut(s) 565, 1305
NmuCI GTSAC 1 cut(s) 1340
NspV TTCGAA 1 cut(s) 988
OliI CACNNNNGTG 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 1089
PagI TCATGA 1 cut(s) 946
PaqCI CACCTGC 2 cut(s) 760, 1045
PasI CCCWGGG 1 cut(s) 1299
PceI AGGCCT 2 cut(s) 97, 1085
PciSI GCTCTTC 1 cut(s) 1098
PcsI WCGNNNNNNNCGW 1 cut(s) 912
PctI GAATGC 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 516
PfeI GAWTC 6 cut(s) 517, 778, 903, 908, 941, 1282
PflMI CCANNNNNTGG 1 cut(s) 685
PfoI TCCNGGA 1 cut(s) 678
PkrI GCNGC 4 cut(s) 122, 130, 1206, 1379
PleI GAGTC 5 cut(s) 218, 278, 424, 1112, 1415
PpsI GAGTC 5 cut(s) 218, 278, 424, 1112, 1415
Ppu21I YACGTR 1 cut(s) 92
Psp6I CCWGG 2 cut(s) 678, 1298
PspGI CCWGG 2 cut(s) 678, 1298
PspN4I GGNNCC 2 cut(s) 565, 1305
PstI CTGCAG 1 cut(s) 1083
PstNI CAGNNNCTG 2 cut(s) 526, 1141
PsuI RGATCY 3 cut(s) 75, 675, 1303
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 2 cut(s) 1008, 1363
RsaNI GTAC 2 cut(s) 1007, 1362
RseI CAYNNNNRTG 2 cut(s) 161, 770
SapI GCTCTTC 1 cut(s) 1098
SaqAI TTAA 5 cut(s) 417, 435, 821, 1271, 1561
SatI GCNGC 4 cut(s) 121, 129, 1205, 1378
Sau3AI GATC 4 cut(s) 75, 408, 675, 1303
SchI GAGTC 5 cut(s) 219, 279, 424, 1112, 1415
ScrFI CCNGG 2 cut(s) 680, 1300
SduI GDGCHC 2 cut(s) 450, 1114
SfaNI GCATC 2 cut(s) 804, 1026
SfcI CTRYAG 3 cut(s) 718, 858, 1079
Sfr274I CTCGAG 1 cut(s) 1089
SfuI TTCGAA 1 cut(s) 988
SlaI CTCGAG 1 cut(s) 1089
SmiMI CAYNNNNRTG 2 cut(s) 161, 770
SmlI CTYRAG 3 cut(s) 1089, 1246, 1400
SmoI CTYRAG 3 cut(s) 1089, 1246, 1400
Sse9I AATT 5 cut(s) 361, 436, 556, 1268, 1489
SseBI AGGCCT 2 cut(s) 97, 1085
SsiI CCGC 5 cut(s) 129, 291, 311, 338, 1307
SspMI CTAG 3 cut(s) 539, 591, 1115
StuI AGGCCT 2 cut(s) 97, 1085
StyD4I CCNGG 2 cut(s) 678, 1298
StyI CCWWGG 2 cut(s) 567, 930
TaaI ACNGT 3 cut(s) 19, 630, 1153
TaiI ACGT 4 cut(s) 94, 303, 973, 1148
TaqI TCGA 4 cut(s) 906, 988, 1090, 1477
TasI AATT 5 cut(s) 361, 436, 556, 1268, 1489
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 6 cut(s) 517, 778, 903, 908, 941, 1282
Tru1I TTAA 5 cut(s) 417, 435, 821, 1271, 1561
Tru9I TTAA 5 cut(s) 417, 435, 821, 1271, 1561
TscAI CASTG 1 cut(s) 280
TseFI GTSAC 1 cut(s) 1340
TseI GCWGC 3 cut(s) 120, 1204, 1377
Tsp45I GTSAC 1 cut(s) 1340
TspDTI ATGAA 5 cut(s) 125, 590, 672, 845, 1170
TspRI CASTG 1 cut(s) 280
Van91I CCANNNNNTGG 1 cut(s) 685
VneI GTGCAC 1 cut(s) 446
XapI RAATTY 2 cut(s) 556, 1489
XhoI CTCGAG 1 cut(s) 1089
XmiI GTMKAC 1 cut(s) 1148
XmnI GAANNNNTTC 1 cut(s) 516
XspI CTAG 3 cut(s) 539, 591, 1115
ZraI GACGTC 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.