Leucine-rich repeats, typical (most populated) subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30100 |
| fragaria_vesca | FvH4_3g39290 FvH4_3g39290 FvH4_3g39290 |
| malus_domestica | MD03G1062600.v1.1 MD11G1066200.v1.1 |
| prunus_persica | Prupe.6G052600_v2.0.a1 |
| pyrus_communis | pycom03g05020 |
| rosa_chinensis | RchiOBHm_Chr5g0070721 |
| rosa_laevigata | RLG00000036153 |
| rosa_multiflora | Rmu_sc0002944.1_g000042 Rmu_sc0036080.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00010470 |
| rosa_rugosa | Rorug05G0408000 |
| rosa_samantha | Rh5AG463500 Rh5BG481300 Rh5CG505600 Rh5DG493900 |
| rosa_wichuraiana | Rw5G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 45 |
| AccB1I | GGYRCC | 1 cut(s) | 45 |
| AccI | GTMKAC | 1 cut(s) | 336 |
| AccII | CGCG | 3 cut(s) | 371, 491, 633 |
| AciI | CCGC | 5 cut(s) | 57, 491, 602, 633, 941 |
| AclI | AACGTT | 1 cut(s) | 76 |
| AclWI | GGATC | 1 cut(s) | 1475 |
| AcsI | RAATTY | 1 cut(s) | 887 |
| AdeI | CACNNNGTG | 1 cut(s) | 995 |
| AfaI | GTAC | 5 cut(s) | 47, 923, 951, 1238, 1369 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 307, 511, 1164 |
| AgeI | ACCGGT | 1 cut(s) | 300 |
| AgsI | TTSAA | 8 cut(s) | 460, 535, 628, 752, 772, 856, 974, 1358 |
| AjiI | CACGTC | 1 cut(s) | 1043 |
| Alw26I | GTCTC | 2 cut(s) | 147, 413 |
| AlwI | GGATC | 1 cut(s) | 1475 |
| AoxI | GGCC | 3 cut(s) | 3, 680, 1053 |
| ApeKI | GCWGC | 4 cut(s) | 319, 322, 1265, 1325 |
| ApoI | RAATTY | 1 cut(s) | 887 |
| AsiGI | ACCGGT | 1 cut(s) | 300 |
| Asp718I | GGTACC | 1 cut(s) | 45 |
| AspLEI | GCGC | 4 cut(s) | 371, 373, 633, 1401 |
| AspS9I | GGNCC | 2 cut(s) | 184, 680 |
| AsuHPI | GGTGA | 3 cut(s) | 574, 979, 1115 |
| AvaII | GGWCC | 1 cut(s) | 184 |
| BanI | GGYRCC | 1 cut(s) | 45 |
| BauI | CACGAG | 1 cut(s) | 361 |
| BbvI | GCAGC | 4 cut(s) | 306, 334, 1252, 1337 |
| BccI | CCATC | 7 cut(s) | 427, 547, 577, 659, 938, 1094, 1136 |
| BceAI | ACGGC | 1 cut(s) | 256 |
| BcoDI | GTCTC | 2 cut(s) | 147, 413 |
| BfaI | CTAG | 6 cut(s) | 84, 312, 540, 938, 1176, 1483 |
| BfmI | CTRYAG | 3 cut(s) | 320, 724, 1371 |
| BfoI | RGCGCY | 1 cut(s) | 1402 |
| BisI | GCNGC | 4 cut(s) | 320, 323, 1266, 1326 |
| BlsI | GCNGC | 4 cut(s) | 321, 324, 1267, 1327 |
| Bme18I | GGWCC | 1 cut(s) | 184 |
| BmgBI | CACGTC | 1 cut(s) | 1043 |
| BmgT120I | GGNCC | 2 cut(s) | 184, 680 |
| BmiI | GGNNCC | 2 cut(s) | 47, 270 |
| BmrI | ACTGGG | 1 cut(s) | 696 |
| BmsI | GCATC | 2 cut(s) | 1252, 1399 |
| BmuI | ACTGGG | 1 cut(s) | 696 |
| Bpu10I | CCTNAGC | 1 cut(s) | 392 |
| BpuEI | CTTGAG | 3 cut(s) | 305, 395, 1070 |
| BsaWI | WCCGGW | 1 cut(s) | 300 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 307, 511, 1164 |
| Bse118I | RCCGGY | 1 cut(s) | 300 |
| Bse1I | ACTGG | 4 cut(s) | 187, 691, 925, 1152 |
| Bse3DI | GCAATG | 1 cut(s) | 795 |
| BseGI | GGATG | 4 cut(s) | 264, 499, 520, 949 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 307, 511, 1164 |
| BseMI | GCAATG | 1 cut(s) | 795 |
| BseNI | ACTGG | 4 cut(s) | 187, 691, 925, 1152 |
| BsePI | GCGCGC | 1 cut(s) | 369 |
| BseRI | GAGGAG | 2 cut(s) | 260, 488 |
| BseXI | GCAGC | 4 cut(s) | 306, 334, 1252, 1337 |
| BseYI | CCCAGC | 1 cut(s) | 872 |
| BsgI | GTGCAG | 1 cut(s) | 197 |
| Bsh1236I | CGCG | 3 cut(s) | 371, 491, 633 |
| BshFI | GGCC | 3 cut(s) | 5, 682, 1055 |
| BshNI | GGYRCC | 1 cut(s) | 45 |
| BshTI | ACCGGT | 1 cut(s) | 300 |
| BsiSI | CCGG | 2 cut(s) | 301, 776 |
| BslFI | GGGAC | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 307, 511, 1164 |
| BsmAI | GTCTC | 2 cut(s) | 147, 413 |
| BsmFI | GGGAC | 1 cut(s) | 371 |
| BsmI | GAATGC | 1 cut(s) | 604 |
| BsnI | GGCC | 3 cut(s) | 5, 682, 1055 |
| Bsp143I | GATC | 3 cut(s) | 931, 1419, 1467 |
| BspACI | CCGC | 5 cut(s) | 57, 491, 602, 633, 941 |
| BspANI | GGCC | 3 cut(s) | 5, 682, 1055 |
| BspFNI | CGCG | 3 cut(s) | 371, 491, 633 |
| BspHI | TCATGA | 1 cut(s) | 1006 |
| BspLI | GGNNCC | 2 cut(s) | 47, 270 |
| BspMAI | CTGCAG | 1 cut(s) | 324 |
| BspPI | GGATC | 1 cut(s) | 1475 |
| BspT107I | GGYRCC | 1 cut(s) | 45 |
| BsrDI | GCAATG | 1 cut(s) | 795 |
| BsrFI | RCCGGY | 1 cut(s) | 300 |
| BsrI | ACTGG | 4 cut(s) | 187, 691, 925, 1152 |
| BssAI | RCCGGY | 1 cut(s) | 300 |
| BssHII | GCGCGC | 1 cut(s) | 369 |
| BssMI | GATC | 3 cut(s) | 931, 1419, 1467 |
| BssSI | CACGAG | 1 cut(s) | 361 |
| Bst2BI | CACGAG | 1 cut(s) | 361 |
| Bst4CI | ACNGT | 8 cut(s) | 45, 50, 712, 719, 1065, 1276, 1372, 1480 |
| Bst6I | CTCTTC | 1 cut(s) | 455 |
| BstC8I | GCNNGC | 2 cut(s) | 371, 1397 |
| BstDEI | CTNAG | 3 cut(s) | 392, 755, 1203 |
| BstEII | GGTNACC | 1 cut(s) | 1103 |
| BstF5I | GGATG | 4 cut(s) | 264, 499, 520, 949 |
| BstFNI | CGCG | 3 cut(s) | 371, 491, 633 |
| BstH2I | RGCGCY | 1 cut(s) | 1402 |
| BstHHI | GCGC | 4 cut(s) | 371, 373, 633, 1401 |
| BstKTI | GATC | 3 cut(s) | 934, 1422, 1470 |
| BstMAI | GTCTC | 2 cut(s) | 147, 413 |
| BstMBI | GATC | 3 cut(s) | 931, 1419, 1467 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 806, 829, 1133 |
| BstPI | GGTNACC | 1 cut(s) | 1103 |
| BstSFI | CTRYAG | 3 cut(s) | 320, 724, 1371 |
| BstUI | CGCG | 3 cut(s) | 371, 491, 633 |
| BstV1I | GCAGC | 4 cut(s) | 306, 334, 1252, 1337 |
| BsuRI | GGCC | 3 cut(s) | 5, 682, 1055 |
| BtrI | CACGTC | 1 cut(s) | 1043 |
| BtsCI | GGATG | 4 cut(s) | 264, 499, 520, 949 |
| BtsIMutI | CAGTG | 2 cut(s) | 741, 1159 |
| Cac8I | GCNNGC | 2 cut(s) | 371, 1397 |
| CciI | TCATGA | 1 cut(s) | 1006 |
| CfoI | GCGC | 4 cut(s) | 371, 373, 633, 1401 |
| Cfr10I | RCCGGY | 1 cut(s) | 300 |
| Cfr13I | GGNCC | 2 cut(s) | 184, 680 |
| Csp6I | GTAC | 5 cut(s) | 46, 922, 950, 1237, 1368 |
| CspAI | ACCGGT | 1 cut(s) | 300 |
| CviAII | CATG | 4 cut(s) | 550, 1007, 1221, 1337 |
| CviQI | GTAC | 5 cut(s) | 46, 922, 950, 1237, 1368 |
| DdeI | CTNAG | 3 cut(s) | 392, 755, 1203 |
| DpnI | GATC | 3 cut(s) | 933, 1421, 1469 |
| DpnII | GATC | 3 cut(s) | 931, 1419, 1467 |
| DraIII | CACNNNGTG | 1 cut(s) | 995 |
| Eam1104I | CTCTTC | 1 cut(s) | 455 |
| EarI | CTCTTC | 1 cut(s) | 455 |
| Eco47I | GGWCC | 1 cut(s) | 184 |
| Eco91I | GGTNACC | 1 cut(s) | 1103 |
| EcoO65I | GGTNACC | 1 cut(s) | 1103 |
| FaeI | CATG | 4 cut(s) | 553, 1010, 1224, 1340 |
| FaqI | GGGAC | 1 cut(s) | 371 |
| FatI | CATG | 4 cut(s) | 549, 1006, 1220, 1336 |
| FauI | CCCGC | 1 cut(s) | 626 |
| FblI | GTMKAC | 1 cut(s) | 336 |
| Fnu4HI | GCNGC | 4 cut(s) | 320, 323, 1266, 1326 |
| FokI | GGATG | 4 cut(s) | 271, 506, 527, 956 |
| Fsp4HI | GCNGC | 4 cut(s) | 320, 323, 1266, 1326 |
| FspBI | CTAG | 6 cut(s) | 84, 312, 540, 938, 1176, 1483 |
| GlaI | GCGC | 4 cut(s) | 370, 372, 632, 1400 |
| GluI | GCNGC | 4 cut(s) | 320, 323, 1266, 1326 |
| GsaI | CCCAGC | 1 cut(s) | 876 |
| HaeII | RGCGCY | 1 cut(s) | 1402 |
| HaeIII | GGCC | 3 cut(s) | 5, 682, 1055 |
| HapII | CCGG | 2 cut(s) | 301, 776 |
| HhaI | GCGC | 4 cut(s) | 371, 373, 633, 1401 |
| Hin1II | CATG | 4 cut(s) | 553, 1010, 1224, 1340 |
| Hin6I | GCGC | 4 cut(s) | 369, 371, 631, 1399 |
| HinP1I | GCGC | 4 cut(s) | 369, 371, 631, 1399 |
| HincII | GTYRAC | 2 cut(s) | 21, 715 |
| HindII | GTYRAC | 2 cut(s) | 21, 715 |
| HindIII | AAGCTT | 4 cut(s) | 840, 858, 1079, 1460 |
| HinfI | GANTC | 9 cut(s) | 115, 359, 403, 731, 761, 893, 970, 1354, 1424 |
| HpaII | CCGG | 2 cut(s) | 301, 776 |
| HphI | GGTGA | 3 cut(s) | 574, 979, 1115 |
| Hpy166II | GTNNAC | 5 cut(s) | 21, 337, 715, 784, 1046 |
| Hpy188I | TCNGA | 6 cut(s) | 120, 277, 649, 898, 931, 1408 |
| Hpy188III | TCNNGA | 6 cut(s) | 69, 152, 284, 974, 1007, 1038 |
| Hpy8I | GTNNAC | 5 cut(s) | 21, 337, 715, 784, 1046 |
| HpyAV | CCTTC | 4 cut(s) | 258, 553, 586, 610 |
| HpyCH4III | ACNGT | 8 cut(s) | 45, 50, 712, 719, 1065, 1276, 1372, 1480 |
| HpyCH4IV | ACGT | 2 cut(s) | 76, 1042 |
| HpyCH4V | TGCA | 5 cut(s) | 35, 178, 322, 1336, 1395 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 806, 829, 1133 |
| HpyF3I | CTNAG | 3 cut(s) | 392, 755, 1203 |
| HpySE526I | ACGT | 2 cut(s) | 76, 1042 |
| Hsp92II | CATG | 4 cut(s) | 553, 1010, 1224, 1340 |
| HspAI | GCGC | 4 cut(s) | 369, 371, 631, 1399 |
| KpnI | GGTACC | 1 cut(s) | 49 |
| Kzo9I | GATC | 3 cut(s) | 931, 1419, 1467 |
| LmnI | GCTCC | 2 cut(s) | 268, 427 |
| Lsp1109I | GCAGC | 4 cut(s) | 306, 334, 1252, 1337 |
| LweI | GCATC | 2 cut(s) | 1252, 1399 |
| MaeI | CTAG | 6 cut(s) | 84, 312, 540, 938, 1176, 1483 |
| MaeII | ACGT | 2 cut(s) | 76, 1042 |
| MaeIII | GTNAC | 3 cut(s) | 193, 719, 1103 |
| MalI | GATC | 3 cut(s) | 933, 1421, 1469 |
| MboI | GATC | 3 cut(s) | 931, 1419, 1467 |
| MboII | GAAGA | 7 cut(s) | 124, 472, 665, 715, 911, 926, 1219 |
| MfeI | CAATTG | 1 cut(s) | 953 |
| MluCI | AATT | 8 cut(s) | 169, 747, 887, 912, 953, 961, 1278, 1414 |
| MlyI | GAGTC | 1 cut(s) | 353 |
| MmeI | TCCRAC | 2 cut(s) | 162, 231 |
| MseI | TTAA | 6 cut(s) | 168, 816, 1229, 1242, 1257, 1281 |
| MslI | CAYNNNNRTG | 2 cut(s) | 800, 1257 |
| MspA1I | CMGCKG | 2 cut(s) | 809, 1328 |
| MspI | CCGG | 2 cut(s) | 301, 776 |
| MunI | CAATTG | 1 cut(s) | 953 |
| Mva1269I | GAATGC | 1 cut(s) | 604 |
| MvnI | CGCG | 3 cut(s) | 371, 491, 633 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 806, 829, 1133 |
| NdeII | GATC | 3 cut(s) | 931, 1419, 1467 |
| NlaIII | CATG | 4 cut(s) | 553, 1010, 1224, 1340 |
| NlaIV | GGNNCC | 2 cut(s) | 47, 270 |
| NmuCI | GTSAC | 2 cut(s) | 193, 1103 |
| PagI | TCATGA | 1 cut(s) | 1006 |
| PauI | GCGCGC | 1 cut(s) | 369 |
| PctI | GAATGC | 1 cut(s) | 604 |
| PfeI | GAWTC | 8 cut(s) | 115, 403, 731, 761, 893, 970, 1354, 1424 |
| PinAI | ACCGGT | 1 cut(s) | 300 |
| PkrI | GCNGC | 4 cut(s) | 321, 324, 1267, 1327 |
| PleI | GAGTC | 1 cut(s) | 353 |
| PpsI | GAGTC | 1 cut(s) | 353 |
| Psp1406I | AACGTT | 1 cut(s) | 76 |
| PspEI | GGTNACC | 1 cut(s) | 1103 |
| PspFI | CCCAGC | 1 cut(s) | 872 |
| PspN4I | GGNNCC | 2 cut(s) | 47, 270 |
| PspPI | GGNCC | 2 cut(s) | 184, 680 |
| PstI | CTGCAG | 1 cut(s) | 324 |
| PteI | GCGCGC | 1 cut(s) | 369 |
| PvuII | CAGCTG | 2 cut(s) | 809, 1328 |
| RsaI | GTAC | 5 cut(s) | 47, 923, 951, 1238, 1369 |
| RsaNI | GTAC | 5 cut(s) | 46, 922, 950, 1237, 1368 |
| RseI | CAYNNNNRTG | 2 cut(s) | 800, 1257 |
| SaqAI | TTAA | 6 cut(s) | 168, 816, 1229, 1242, 1257, 1281 |
| SatI | GCNGC | 4 cut(s) | 320, 323, 1266, 1326 |
| Sau3AI | GATC | 3 cut(s) | 931, 1419, 1467 |
| Sau96I | GGNCC | 2 cut(s) | 184, 680 |
| SchI | GAGTC | 1 cut(s) | 353 |
| SfaNI | GCATC | 2 cut(s) | 1252, 1399 |
| SfcI | CTRYAG | 3 cut(s) | 320, 724, 1371 |
| SinI | GGWCC | 1 cut(s) | 184 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 800, 1257 |
| SmlI | CTYRAG | 3 cut(s) | 284, 374, 1049 |
| SmoI | CTYRAG | 3 cut(s) | 284, 374, 1049 |
| Sse9I | AATT | 8 cut(s) | 169, 747, 887, 912, 953, 961, 1278, 1414 |
| SsiI | CCGC | 5 cut(s) | 57, 491, 602, 633, 941 |
| SspMI | CTAG | 6 cut(s) | 84, 312, 540, 938, 1176, 1483 |
| TaaI | ACNGT | 8 cut(s) | 45, 50, 712, 719, 1065, 1276, 1372, 1480 |
| TaiI | ACGT | 2 cut(s) | 79, 1045 |
| TaqI | TCGA | 5 cut(s) | 151, 411, 440, 986, 1422 |
| TasI | AATT | 8 cut(s) | 169, 747, 887, 912, 953, 961, 1278, 1414 |
| TatI | WGTACW | 1 cut(s) | 949 |
| TfiI | GAWTC | 8 cut(s) | 115, 403, 731, 761, 893, 970, 1354, 1424 |
| Tru1I | TTAA | 6 cut(s) | 168, 816, 1229, 1242, 1257, 1281 |
| Tru9I | TTAA | 6 cut(s) | 168, 816, 1229, 1242, 1257, 1281 |
| TscAI | CASTG | 2 cut(s) | 741, 1159 |
| TseFI | GTSAC | 2 cut(s) | 193, 1103 |
| TseI | GCWGC | 4 cut(s) | 319, 322, 1265, 1325 |
| Tsp45I | GTSAC | 2 cut(s) | 193, 1103 |
| TspDTI | ATGAA | 3 cut(s) | 308, 995, 1091 |
| TspGWI | ACGGA | 1 cut(s) | 1360 |
| TspRI | CASTG | 2 cut(s) | 741, 1159 |
| VpaK11BI | GGWCC | 1 cut(s) | 184 |
| XapI | RAATTY | 1 cut(s) | 887 |
| XmiI | GTMKAC | 1 cut(s) | 336 |
| XspI | CTAG | 6 cut(s) | 84, 312, 540, 938, 1176, 1483 |