Pentatricopeptide repeat-containing protein At2g30100
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30100 |
| fragaria_vesca | FvH4_3g39290 FvH4_3g39290 FvH4_3g39290 |
| malus_domestica | MD03G1062600.v1.1 MD11G1066200.v1.1 |
| prunus_persica | Prupe.6G052600_v2.0.a1 |
| pyrus_communis | pycom03g05020 |
| rosa_chinensis | RchiOBHm_Chr5g0070721 |
| rosa_laevigata | RLG00000036153 |
| rosa_multiflora | Rmu_sc0002944.1_g000042 Rmu_sc0036080.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00010470 |
| rosa_rugosa | Rorug05G0408000 |
| rosa_samantha | Rh5AG463500 Rh5BG481300 Rh5CG505600 Rh5DG493900 |
| rosa_wichuraiana | Rw5G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 866 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1018 |
| AccI | GTMKAC | 2 cut(s) | 354, 801 |
| AciI | CCGC | 2 cut(s) | 620, 1121 |
| AclWI | GGATC | 2 cut(s) | 453, 1493 |
| AcoI | YGGCCR | 1 cut(s) | 327 |
| AcsI | RAATTY | 1 cut(s) | 905 |
| AfaI | GTAC | 2 cut(s) | 969, 1256 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 102, 325, 529, 1018, 1165 |
| AgeI | ACCGGT | 1 cut(s) | 318 |
| AgsI | TTSAA | 7 cut(s) | 187, 197, 263, 553, 646, 790, 874 |
| AjnI | CCWGG | 1 cut(s) | 1035 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 489, 521 |
| AluBI | AGCT | 7 cut(s) | 343, 807, 827, 860, 902, 1346, 1480 |
| AluI | AGCT | 7 cut(s) | 343, 807, 827, 860, 902, 1346, 1480 |
| Alw26I | GTCTC | 3 cut(s) | 77, 165, 431 |
| AlwI | GGATC | 2 cut(s) | 453, 1493 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 211 |
| AoxI | GGCC | 4 cut(s) | 327, 698, 1071, 1167 |
| ApeKI | GCWGC | 4 cut(s) | 58, 1283, 1343, 1351 |
| ApoI | RAATTY | 1 cut(s) | 905 |
| AsiGI | ACCGGT | 1 cut(s) | 318 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1003 |
| AspLEI | GCGC | 4 cut(s) | 91, 391, 867, 1419 |
| AspS9I | GGNCC | 4 cut(s) | 202, 698, 1123, 1442 |
| AsuC2I | CCSGG | 2 cut(s) | 425, 1325 |
| AsuHPI | GGTGA | 5 cut(s) | 251, 592, 617, 775, 997 |
| AvaII | GGWCC | 3 cut(s) | 202, 1123, 1442 |
| BaeGI | GKGCMC | 1 cut(s) | 1325 |
| BbsI | GAAGAC | 1 cut(s) | 678 |
| BbvI | GCAGC | 4 cut(s) | 70, 1270, 1338, 1355 |
| BccI | CCATC | 7 cut(s) | 436, 565, 595, 677, 721, 956, 1154 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 1 cut(s) | 1037 |
| BcnI | CCSGG | 2 cut(s) | 425, 1325 |
| BcoDI | GTCTC | 3 cut(s) | 77, 165, 431 |
| BfaI | CTAG | 2 cut(s) | 114, 216 |
| BfmI | CTRYAG | 4 cut(s) | 742, 802, 1176, 1284 |
| BfoI | RGCGCY | 1 cut(s) | 1420 |
| BglII | AGATCT | 1 cut(s) | 949 |
| BisI | GCNGC | 4 cut(s) | 59, 1284, 1344, 1352 |
| BlsI | GCNGC | 4 cut(s) | 60, 1285, 1345, 1353 |
| Bme1390I | CCNGG | 3 cut(s) | 425, 1037, 1325 |
| Bme18I | GGWCC | 3 cut(s) | 202, 1123, 1442 |
| BmgT120I | GGNCC | 4 cut(s) | 202, 698, 1123, 1442 |
| BmiI | GGNNCC | 3 cut(s) | 288, 410, 1034 |
| BmrFI | CCNGG | 3 cut(s) | 425, 1037, 1325 |
| BmsI | GCATC | 5 cut(s) | 14, 1108, 1270, 1380, 1417 |
| BpiI | GAAGAC | 1 cut(s) | 678 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1361 |
| BpuEI | CTTGAG | 3 cut(s) | 323, 413, 1088 |
| BpuMI | CCSGG | 2 cut(s) | 425, 1325 |
| BsaI | GGTCTC | 1 cut(s) | 77 |
| BsaJI | CCNNGG | 2 cut(s) | 76, 1012 |
| BsaWI | WCCGGW | 1 cut(s) | 318 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 102, 325, 529, 1018, 1165 |
| Bse118I | RCCGGY | 1 cut(s) | 318 |
| Bse1I | ACTGG | 5 cut(s) | 205, 709, 1170, 1209, 1431 |
| Bse3DI | GCAATG | 3 cut(s) | 813, 825, 1047 |
| BseBI | CCWGG | 1 cut(s) | 1037 |
| BseDI | CCNNGG | 2 cut(s) | 76, 1012 |
| BseGI | GGATG | 3 cut(s) | 235, 517, 1371 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 102, 325, 529, 1018, 1165 |
| BseMI | GCAATG | 3 cut(s) | 813, 825, 1047 |
| BseMII | CTCAG | 3 cut(s) | 99, 377, 1437 |
| BseNI | ACTGG | 5 cut(s) | 205, 709, 1170, 1209, 1431 |
| BseSI | GKGCMC | 1 cut(s) | 1325 |
| BseXI | GCAGC | 4 cut(s) | 70, 1270, 1338, 1355 |
| BseYI | CCCAGC | 1 cut(s) | 890 |
| Bsh1285I | CGRYCG | 1 cut(s) | 319 |
| BshFI | GGCC | 4 cut(s) | 329, 700, 1073, 1169 |
| BshTI | ACCGGT | 1 cut(s) | 318 |
| BsiEI | CGRYCG | 1 cut(s) | 319 |
| BsiSI | CCGG | 3 cut(s) | 319, 424, 1325 |
| BslFI | GGGAC | 2 cut(s) | 389, 1281 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 102, 325, 529, 1018, 1165 |
| BsmAI | GTCTC | 3 cut(s) | 77, 165, 431 |
| BsmBI | CGTCTC | 1 cut(s) | 431 |
| BsmFI | GGGAC | 2 cut(s) | 389, 1281 |
| BsnI | GGCC | 4 cut(s) | 329, 700, 1073, 1169 |
| Bso31I | GGTCTC | 1 cut(s) | 77 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1325 |
| Bsp143I | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| Bsp19I | CCATGG | 1 cut(s) | 1012 |
| BspACI | CCGC | 2 cut(s) | 620, 1121 |
| BspANI | GGCC | 4 cut(s) | 329, 700, 1073, 1169 |
| BspCNI | CTCAG | 3 cut(s) | 98, 376, 1436 |
| BspHI | TCATGA | 1 cut(s) | 1024 |
| BspLI | GGNNCC | 3 cut(s) | 288, 410, 1034 |
| BspMAI | CTGCAG | 1 cut(s) | 1288 |
| BspPI | GGATC | 2 cut(s) | 453, 1493 |
| BspTNI | GGTCTC | 1 cut(s) | 77 |
| BsrDI | GCAATG | 3 cut(s) | 813, 825, 1047 |
| BsrFI | RCCGGY | 1 cut(s) | 318 |
| BsrI | ACTGG | 5 cut(s) | 205, 709, 1170, 1209, 1431 |
| BssAI | RCCGGY | 1 cut(s) | 318 |
| BssECI | CCNNGG | 2 cut(s) | 76, 1012 |
| BssMI | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| BssT1I | CCWWGG | 1 cut(s) | 1012 |
| Bst2UI | CCWGG | 1 cut(s) | 1037 |
| Bst4CI | ACNGT | 3 cut(s) | 972, 1185, 1294 |
| BstC8I | GCNNGC | 3 cut(s) | 21, 125, 1415 |
| BstDEI | CTNAG | 6 cut(s) | 85, 363, 773, 1247, 1361, 1423 |
| BstDSI | CCRYGG | 2 cut(s) | 76, 1012 |
| BstEII | GGTNACC | 1 cut(s) | 1204 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 100 |
| BstF5I | GGATG | 3 cut(s) | 235, 517, 1371 |
| BstH2I | RGCGCY | 1 cut(s) | 1420 |
| BstHHI | GCGC | 4 cut(s) | 91, 391, 867, 1419 |
| BstKTI | GATC | 4 cut(s) | 448, 952, 1440, 1488 |
| BstMAI | GTCTC | 3 cut(s) | 77, 165, 431 |
| BstMBI | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| BstMCI | CGRYCG | 1 cut(s) | 319 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 824, 1151, 1357 |
| BstNI | CCWGG | 1 cut(s) | 1037 |
| BstPI | GGTNACC | 1 cut(s) | 1204 |
| BstSCI | CCNGG | 3 cut(s) | 423, 1035, 1323 |
| BstSFI | CTRYAG | 4 cut(s) | 742, 802, 1176, 1284 |
| BstSLI | GKGCMC | 1 cut(s) | 1325 |
| BstV1I | GCAGC | 4 cut(s) | 70, 1270, 1338, 1355 |
| BstV2I | GAAGAC | 1 cut(s) | 678 |
| BstX2I | RGATCY | 2 cut(s) | 445, 949 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1382 |
| BstYI | RGATCY | 2 cut(s) | 445, 949 |
| BsuRI | GGCC | 4 cut(s) | 329, 700, 1073, 1169 |
| BtgI | CCRYGG | 2 cut(s) | 76, 1012 |
| BtsCI | GGATG | 3 cut(s) | 235, 517, 1371 |
| BtsIMutI | CAGTG | 2 cut(s) | 759, 1177 |
| Cac8I | GCNNGC | 3 cut(s) | 21, 125, 1415 |
| CaiI | CAGNNNCTG | 1 cut(s) | 211 |
| CciI | TCATGA | 1 cut(s) | 1024 |
| CfoI | GCGC | 4 cut(s) | 91, 391, 867, 1419 |
| Cfr10I | RCCGGY | 1 cut(s) | 318 |
| Cfr13I | GGNCC | 4 cut(s) | 202, 698, 1123, 1442 |
| Csp6I | GTAC | 2 cut(s) | 968, 1255 |
| CspAI | ACCGGT | 1 cut(s) | 318 |
| CviAII | CATG | 7 cut(s) | 381, 535, 568, 1013, 1025, 1061, 1239 |
| CviQI | GTAC | 2 cut(s) | 968, 1255 |
| DdeI | CTNAG | 6 cut(s) | 85, 363, 773, 1247, 1361, 1423 |
| DpnI | GATC | 4 cut(s) | 447, 951, 1439, 1487 |
| DpnII | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| EaeI | YGGCCR | 1 cut(s) | 327 |
| Eco130I | CCWWGG | 1 cut(s) | 1012 |
| Eco31I | GGTCTC | 1 cut(s) | 77 |
| Eco47I | GGWCC | 3 cut(s) | 202, 1123, 1442 |
| Eco91I | GGTNACC | 1 cut(s) | 1204 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 100 |
| EcoO65I | GGTNACC | 1 cut(s) | 1204 |
| EcoRII | CCWGG | 1 cut(s) | 1035 |
| EcoT14I | CCWWGG | 1 cut(s) | 1012 |
| ErhI | CCWWGG | 1 cut(s) | 1012 |
| Esp3I | CGTCTC | 1 cut(s) | 431 |
| FaeI | CATG | 7 cut(s) | 384, 538, 571, 1016, 1028, 1064, 1242 |
| FaqI | GGGAC | 2 cut(s) | 389, 1281 |
| FatI | CATG | 7 cut(s) | 380, 534, 567, 1012, 1024, 1060, 1238 |
| FblI | GTMKAC | 2 cut(s) | 354, 801 |
| Fnu4HI | GCNGC | 4 cut(s) | 59, 1284, 1344, 1352 |
| FokI | GGATG | 3 cut(s) | 242, 524, 1358 |
| Fsp4HI | GCNGC | 4 cut(s) | 59, 1284, 1344, 1352 |
| FspBI | CTAG | 2 cut(s) | 114, 216 |
| FspI | TGCGCA | 1 cut(s) | 866 |
| GlaI | GCGC | 4 cut(s) | 90, 390, 866, 1418 |
| GluI | GCNGC | 4 cut(s) | 59, 1284, 1344, 1352 |
| GsaI | CCCAGC | 1 cut(s) | 894 |
| HaeII | RGCGCY | 1 cut(s) | 1420 |
| HaeIII | GGCC | 4 cut(s) | 329, 700, 1073, 1169 |
| HapII | CCGG | 3 cut(s) | 319, 424, 1325 |
| HhaI | GCGC | 4 cut(s) | 91, 391, 867, 1419 |
| Hin1II | CATG | 7 cut(s) | 384, 538, 571, 1016, 1028, 1064, 1242 |
| Hin6I | GCGC | 4 cut(s) | 89, 389, 865, 1417 |
| HinP1I | GCGC | 4 cut(s) | 89, 389, 865, 1417 |
| HincII | GTYRAC | 2 cut(s) | 30, 520 |
| HindII | GTYRAC | 2 cut(s) | 30, 520 |
| HindIII | AAGCTT | 2 cut(s) | 858, 1478 |
| HinfI | GANTC | 8 cut(s) | 117, 377, 487, 749, 766, 779, 988, 1379 |
| HpaII | CCGG | 3 cut(s) | 319, 424, 1325 |
| HphI | GGTGA | 5 cut(s) | 251, 592, 617, 775, 997 |
| Hpy166II | GTNNAC | 5 cut(s) | 30, 355, 520, 532, 802 |
| Hpy188I | TCNGA | 8 cut(s) | 295, 413, 492, 667, 949, 961, 1426, 1442 |
| Hpy188III | TCNNGA | 8 cut(s) | 170, 211, 302, 365, 478, 934, 992, 1025 |
| Hpy8I | GTNNAC | 5 cut(s) | 30, 355, 520, 532, 802 |
| Hpy99I | CGWCG | 2 cut(s) | 224, 227 |
| HpyAV | CCTTC | 5 cut(s) | 236, 533, 571, 604, 868 |
| HpyCH4III | ACNGT | 3 cut(s) | 972, 1185, 1294 |
| HpyCH4IV | ACGT | 1 cut(s) | 649 |
| HpyCH4V | TGCA | 6 cut(s) | 47, 123, 818, 1286, 1354, 1413 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 824, 1151, 1357 |
| HpyF3I | CTNAG | 6 cut(s) | 85, 363, 773, 1247, 1361, 1423 |
| HpySE526I | ACGT | 1 cut(s) | 649 |
| Hsp92II | CATG | 7 cut(s) | 384, 538, 571, 1016, 1028, 1064, 1242 |
| HspAI | GCGC | 4 cut(s) | 89, 389, 865, 1417 |
| Kzo9I | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| LmnI | GCTCC | 3 cut(s) | 271, 414, 1038 |
| Lsp1109I | GCAGC | 4 cut(s) | 70, 1270, 1338, 1355 |
| LweI | GCATC | 5 cut(s) | 14, 1108, 1270, 1380, 1417 |
| MaeI | CTAG | 2 cut(s) | 114, 216 |
| MaeII | ACGT | 1 cut(s) | 649 |
| MaeIII | GTNAC | 2 cut(s) | 336, 1204 |
| MalI | GATC | 4 cut(s) | 447, 951, 1439, 1487 |
| MboI | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| MboII | GAAGA | 5 cut(s) | 275, 683, 733, 944, 996 |
| MfeI | CAATTG | 1 cut(s) | 979 |
| MflI | RGATCY | 2 cut(s) | 445, 949 |
| MhlI | GDGCHC | 1 cut(s) | 1325 |
| MluCI | AATT | 6 cut(s) | 197, 266, 482, 654, 905, 979 |
| MlyI | GAGTC | 1 cut(s) | 371 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1003 |
| MseI | TTAA | 4 cut(s) | 51, 834, 1260, 1501 |
| MslI | CAYNNNNRTG | 3 cut(s) | 818, 1275, 1493 |
| MspA1I | CMGCKG | 2 cut(s) | 827, 1346 |
| MspI | CCGG | 3 cut(s) | 319, 424, 1325 |
| MspR9I | CCNGG | 3 cut(s) | 425, 1037, 1325 |
| MunI | CAATTG | 1 cut(s) | 979 |
| MvaI | CCWGG | 1 cut(s) | 1037 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 824, 1151, 1357 |
| NciI | CCSGG | 2 cut(s) | 425, 1325 |
| NcoI | CCATGG | 1 cut(s) | 1012 |
| NdeII | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| NlaIII | CATG | 7 cut(s) | 384, 538, 571, 1016, 1028, 1064, 1242 |
| NlaIV | GGNNCC | 3 cut(s) | 288, 410, 1034 |
| NmeAIII | GCCGAG | 2 cut(s) | 582, 1099 |
| NsbI | TGCGCA | 1 cut(s) | 866 |
| PagI | TCATGA | 1 cut(s) | 1024 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1003 |
| PfeI | GAWTC | 7 cut(s) | 117, 487, 749, 766, 779, 988, 1379 |
| PflFI | GACNNNGTC | 1 cut(s) | 1446 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1018 |
| PinAI | ACCGGT | 1 cut(s) | 318 |
| PkrI | GCNGC | 4 cut(s) | 60, 1285, 1345, 1353 |
| PleI | GAGTC | 1 cut(s) | 371 |
| PpsI | GAGTC | 1 cut(s) | 371 |
| Psp6I | CCWGG | 1 cut(s) | 1035 |
| PspEI | GGTNACC | 1 cut(s) | 1204 |
| PspFI | CCCAGC | 1 cut(s) | 890 |
| PspGI | CCWGG | 1 cut(s) | 1035 |
| PspN4I | GGNNCC | 3 cut(s) | 288, 410, 1034 |
| PspPI | GGNCC | 4 cut(s) | 202, 698, 1123, 1442 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1189, 1221 |
| PstI | CTGCAG | 1 cut(s) | 1288 |
| PstNI | CAGNNNCTG | 1 cut(s) | 211 |
| PsuI | RGATCY | 2 cut(s) | 445, 949 |
| PsyI | GACNNNGTC | 1 cut(s) | 1446 |
| PvuII | CAGCTG | 2 cut(s) | 827, 1346 |
| RsaI | GTAC | 2 cut(s) | 969, 1256 |
| RsaNI | GTAC | 2 cut(s) | 968, 1255 |
| RseI | CAYNNNNRTG | 3 cut(s) | 818, 1275, 1493 |
| SaqAI | TTAA | 4 cut(s) | 51, 834, 1260, 1501 |
| SatI | GCNGC | 4 cut(s) | 59, 1284, 1344, 1352 |
| Sau3AI | GATC | 4 cut(s) | 445, 949, 1437, 1485 |
| Sau96I | GGNCC | 4 cut(s) | 202, 698, 1123, 1442 |
| SchI | GAGTC | 1 cut(s) | 371 |
| ScrFI | CCNGG | 3 cut(s) | 425, 1037, 1325 |
| SduI | GDGCHC | 1 cut(s) | 1325 |
| SfaNI | GCATC | 5 cut(s) | 14, 1108, 1270, 1380, 1417 |
| SfcI | CTRYAG | 4 cut(s) | 742, 802, 1176, 1284 |
| SinI | GGWCC | 3 cut(s) | 202, 1123, 1442 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 818, 1275, 1493 |
| SmlI | CTYRAG | 4 cut(s) | 12, 302, 392, 1067 |
| SmoI | CTYRAG | 4 cut(s) | 12, 302, 392, 1067 |
| Sse9I | AATT | 6 cut(s) | 197, 266, 482, 654, 905, 979 |
| SsiI | CCGC | 2 cut(s) | 620, 1121 |
| SspMI | CTAG | 2 cut(s) | 114, 216 |
| StyD4I | CCNGG | 3 cut(s) | 423, 1035, 1323 |
| StyI | CCWWGG | 1 cut(s) | 1012 |
| TaaI | ACNGT | 3 cut(s) | 972, 1185, 1294 |
| TaiI | ACGT | 1 cut(s) | 652 |
| TaqI | TCGA | 4 cut(s) | 158, 169, 429, 933 |
| TasI | AATT | 6 cut(s) | 197, 266, 482, 654, 905, 979 |
| TatI | WGTACW | 1 cut(s) | 967 |
| TfiI | GAWTC | 7 cut(s) | 117, 487, 749, 766, 779, 988, 1379 |
| Tru1I | TTAA | 4 cut(s) | 51, 834, 1260, 1501 |
| Tru9I | TTAA | 4 cut(s) | 51, 834, 1260, 1501 |
| TscAI | CASTG | 2 cut(s) | 759, 1177 |
| TseI | GCWGC | 4 cut(s) | 58, 1283, 1343, 1351 |
| TspDTI | ATGAA | 8 cut(s) | 133, 246, 326, 758, 861, 1013, 1109, 1453 |
| TspGWI | ACGGA | 1 cut(s) | 65 |
| TspRI | CASTG | 2 cut(s) | 759, 1177 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1446 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1018 |
| VpaK11BI | GGWCC | 3 cut(s) | 202, 1123, 1442 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 100 |
| XapI | RAATTY | 1 cut(s) | 905 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1382 |
| XmiI | GTMKAC | 2 cut(s) | 354, 801 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1003 |
| XspI | CTAG | 2 cut(s) | 114, 216 |