FvH4_4g02010

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
1798513 .. 1800480
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g02010.t1

Sequence Viewer

Length: 1317 bp
ATGGGCCGTGGGCCCCCACCACCCACCCCTTCCTCCGCCGCCGCCGCCGCCGCCACCACGACCACCAACCTCCTCGGAAAGTATCAAATCAGCCGGATGCTGGGCCGCGGCAGCTTCGCCAAGGTCTATAAGGCCCAAACCATCGCCGACGAGACTCCCGTCGCCATTAAAATCATCGACAAGCTCAAAACCCACGCCGCGATGGAGCCTCTGATCCTCCGGGAGATCTCCGCCATGCGCCGTCTCCAGGACCACCCTAACATTCTCAAAATCCACGAGGTCATGGCCACCAAGTCCAAGATCTACATCGTCGTGGAGCTCGCCACCGGCGGCGAGCTGTTCGCCAAGATCTCACGGCACGGCAAGTTGCCGGAGTCTCTGGCCCGCCGCTACTTCCAGCAGCTCGTCTCCGCCCTCCGCTTCTGCCACGAGAACGGCGTCGCTCACCGCGACGTGAAGCCGCAGAACCTCCTCCTCGACGGCAACGGCGACCTCAAAGTCTCCGATTTCGGACTCTCCGCCCTACCGGAGCAGCTCAAAAACGGCCTCCTCCACACCGCCTGCGGGACTCCGGCGTACACGGCGCCGGAGGTGCTCTACCGGGTCGGGTACGACGGGTCCAAGGCCGACGCGTGGTCCTGCGGCGTCATCCTCTTCGTCCTCCTCGCCGGACACTTGCCGTTCGACGACAGCAACCTGGTGGCGATGCACAAGAAGATCCAACGCCGCGATTACGTCATACCGGCGGCGATTTCGAAACCGGCGCGGCGGATCATATACCAGCTCCTCGACCCGAACCCGAACACGCGGCTGAGCGTGGAGGCCGTGATGGAGAAGGCGTGGTTCCAGAAGGCCATAGATCTGAAGCTAGTCTCCGACGGCTGCGATGTCTTTGAATTGGAGAAGCCGCCGGCGAAATGCGACGTCGTTTCGGGGATGAACGCGTTCGACATAATATCCATGTCGTCGGGGCTGGACTTGTCGGGGCTTTTCGAGGCGGAGAACAGGAGCGAGAGGCGGTTCACGGCGAATGTGGCGGCGGAGAAGGTGGCGGAAAAGGTGGGGGAGGTTGGGGAGAGGATGGGGTATAAAGCGGAGAGAGGGAAAGGAGGGATGAGCGTTGGGTTGGGGAAAGGAGGGAAAGGGAAAGGACGACGTGTCGCTTTGGTGGTGGAGATGATGGAGGTGGCGGCGGGTTTGGTTTTGGGGGAGGTCAAGATGGTGGAGGGTGGTGTTGAGTTTCCTGAGCTGCTTTGGGAGGACTTGAAGACTGGGTTGGGGGACGTTGTGGTGTCTTGGCAAAACGGTGGCGTTTAG

Protein Analysis

439

Amino Acids

47.5

Weight (kDa)

8.87

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 28 - 282 1.8e-70 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 29 - 278 4.3e-36 Protein tyrosine and serine/threonine kinase
NAF PF03822 313 - 366 2.2e-18 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014951)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 497
AatII GACGTC 1 cut(s) 927
AccB1I GGYRCC 1 cut(s) 583
AccII CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
AclWI GGATC 3 cut(s) 208, 712, 779
AcoI YGGCCR 1 cut(s) 285
AcuI CTGAAG 1 cut(s) 884
AcyI GRCGYC 4 cut(s) 438, 584, 645, 924
AfaI GTAC 2 cut(s) 578, 611
AfiI CCNNNNNNNGG 4 cut(s) 100, 247, 564, 633
AflIII ACRYGT 3 cut(s) 630, 942, 1156
AgsI TTSAA 2 cut(s) 896, 1267
AhdI GACNNNNNGTC 2 cut(s) 634, 1157
AjiI CACGTC 2 cut(s) 454, 1157
AjnI CCWGG 2 cut(s) 246, 696
AjuI GAANNNNNNNTTGG 2 cut(s) 1259, 1291
AluBI AGCT 9 cut(s) 114, 184, 319, 337, 403, 535, 784, 868, 1249
AluI AGCT 9 cut(s) 114, 184, 319, 337, 403, 535, 784, 868, 1249
Alw21I GWGCWC 2 cut(s) 321, 597
Alw26I GTCTC 6 cut(s) 146, 248, 381, 412, 505, 877
AlwI GGATC 3 cut(s) 208, 712, 779
ApaI GGGCCC 1 cut(s) 15
ApeKI GCWGC 5 cut(s) 111, 400, 532, 882, 1249
Asp700I GAANNNNTTC 1 cut(s) 944
AspLEI GCGC 3 cut(s) 240, 586, 766
AspS9I GGNCC 9 cut(s) 4, 11, 12, 103, 133, 250, 382, 618, 636
AsuC2I CCSGG 2 cut(s) 221, 602
AsuHPI GGTGA 1 cut(s) 437
AsuII TTCGAA 1 cut(s) 755
AvaII GGWCC 3 cut(s) 250, 618, 636
BaeGI GKGCMC 1 cut(s) 15
BalI TGGCCA 1 cut(s) 287
BanI GGYRCC 1 cut(s) 583
BanII GRGCYC 2 cut(s) 15, 321
BauI CACGAG 2 cut(s) 275, 428
BbsI GAAGAC 1 cut(s) 1274
Bbv12I GWGCWC 2 cut(s) 321, 597
BbvI GCAGC 5 cut(s) 123, 412, 544, 869, 1236
BccI CCATC 6 cut(s) 149, 196, 823, 1075, 1174, 1213
BciT130I CCWGG 2 cut(s) 248, 698
BcnI CCSGG 2 cut(s) 221, 602
BcoDI GTCTC 6 cut(s) 146, 248, 381, 412, 505, 877
BfaI CTAG 1 cut(s) 869
BfoI RGCGCY 1 cut(s) 587
BglII AGATCT 4 cut(s) 225, 300, 348, 859
BlpI GCTNAGC 1 cut(s) 812
Bme1390I CCNGG 4 cut(s) 221, 248, 602, 698
Bme18I GGWCC 3 cut(s) 250, 618, 636
BmeRI GACNNNNNGTC 2 cut(s) 634, 1157
BmgBI CACGTC 2 cut(s) 454, 1157
BmgT120I GGNCC 9 cut(s) 4, 11, 12, 103, 133, 250, 382, 618, 636
BmiI GGNNCC 6 cut(s) 13, 14, 207, 585, 619, 845
BmrFI CCNGG 4 cut(s) 221, 248, 602, 698
BmrI ACTGGG 1 cut(s) 1281
BmsI GCATC 2 cut(s) 87, 696
BmuI ACTGGG 1 cut(s) 1281
BoxI GACNNNNGTC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 1274
BpmI CTGGAG 1 cut(s) 230
Bpu10I CCTNAGC 1 cut(s) 1245
Bpu1102I GCTNAGC 1 cut(s) 812
Bpu14I TTCGAA 1 cut(s) 755
BpuMI CCSGG 2 cut(s) 221, 602
BsaBI GATNNNNATC 1 cut(s) 305
BsaHI GRCGYC 4 cut(s) 438, 584, 645, 924
BsaJI CCNNGG 5 cut(s) 7, 73, 106, 120, 621
BsaWI WCCGGW 1 cut(s) 526
BsaXI ACNNNNNCTCC 2 cut(s) 824, 854
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 247, 564, 633
Bse118I RCCGGY 4 cut(s) 326, 742, 760, 910
Bse1I ACTGG 1 cut(s) 1276
Bse8I GATNNNNATC 1 cut(s) 305
BseBI CCWGG 2 cut(s) 248, 698
BseDI CCNNGG 5 cut(s) 7, 73, 106, 120, 621
BseGI GGATG 5 cut(s) 102, 648, 942, 1086, 1119
BseJI GATNNNNATC 1 cut(s) 305
BseLI CCNNNNNNNGG 4 cut(s) 100, 247, 564, 633
BseMII CTCAG 2 cut(s) 803, 1236
BseNI ACTGG 1 cut(s) 1276
BseRI GAGGAG 6 cut(s) 62, 461, 464, 539, 653, 776
BseSI GKGCMC 1 cut(s) 15
BseXI GCAGC 5 cut(s) 123, 412, 544, 869, 1236
BseYI CCCAGC 1 cut(s) 100
Bsh1236I CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
BshNI GGYRCC 1 cut(s) 583
BsiHKAI GWGCWC 2 cut(s) 321, 597
BslFI GGGAC 2 cut(s) 580, 1295
BslI CCNNNNNNNGG 4 cut(s) 100, 247, 564, 633
BsmAI GTCTC 6 cut(s) 146, 248, 381, 412, 505, 877
BsmBI CGTCTC 2 cut(s) 248, 412
BsmFI GGGAC 2 cut(s) 580, 1295
Bsp119I TTCGAA 1 cut(s) 755
Bsp120I GGGCCC 1 cut(s) 11
Bsp1286I GDGCHC 3 cut(s) 15, 321, 597
Bsp143I GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
Bsp1720I GCTNAGC 1 cut(s) 812
BspCNI CTCAG 2 cut(s) 804, 1237
BspFNI CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
BspLI GGNNCC 6 cut(s) 13, 14, 207, 585, 619, 845
BspPI GGATC 3 cut(s) 208, 712, 779
BspT104I TTCGAA 1 cut(s) 755
BspT107I GGYRCC 1 cut(s) 583
BsrFI RCCGGY 4 cut(s) 326, 742, 760, 910
BsrI ACTGG 1 cut(s) 1276
BssAI RCCGGY 4 cut(s) 326, 742, 760, 910
BssECI CCNNGG 5 cut(s) 7, 73, 106, 120, 621
BssMI GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
BssNI GRCGYC 4 cut(s) 438, 584, 645, 924
BssSI CACGAG 2 cut(s) 275, 428
BssT1I CCWWGG 2 cut(s) 120, 621
Bst2BI CACGAG 2 cut(s) 275, 428
Bst2UI CCWGG 2 cut(s) 248, 698
Bst4CI ACNGT 1 cut(s) 1307
Bst6I CTCTTC 1 cut(s) 659
BstACI GRCGYC 4 cut(s) 438, 584, 645, 924
BstBI TTCGAA 1 cut(s) 755
BstC8I GCNNGC 5 cut(s) 321, 335, 385, 562, 912
BstDEI CTNAG 2 cut(s) 812, 1245
BstDSI CCRYGG 2 cut(s) 7, 106
BstF5I GGATG 5 cut(s) 102, 648, 942, 1086, 1119
BstFNI CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 3 cut(s) 240, 586, 766
BstKTI GATC 7 cut(s) 216, 228, 303, 351, 720, 774, 862
BstMAI GTCTC 6 cut(s) 146, 248, 381, 412, 505, 877
BstMBI GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
BstMWI GCNNNNNNNGC 7 cut(s) 44, 47, 50, 111, 581, 592, 1034
BstNI CCWGG 2 cut(s) 248, 698
BstPAI GACNNNNGTC 1 cut(s) 158
BstSCI CCNGG 4 cut(s) 219, 246, 600, 696
BstSLI GKGCMC 1 cut(s) 15
BstUI CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
BstV1I GCAGC 5 cut(s) 123, 412, 544, 869, 1236
BstV2I GAAGAC 1 cut(s) 1274
BstX2I RGATCY 5 cut(s) 225, 300, 348, 717, 859
BstYI RGATCY 5 cut(s) 225, 300, 348, 717, 859
BtgI CCRYGG 2 cut(s) 7, 106
BtgZI GCGATG 4 cut(s) 127, 215, 719, 900
BtrI CACGTC 2 cut(s) 454, 1157
BtsCI GGATG 5 cut(s) 102, 648, 942, 1086, 1119
Cac8I GCNNGC 5 cut(s) 321, 335, 385, 562, 912
CfoI GCGC 3 cut(s) 240, 586, 766
Cfr10I RCCGGY 4 cut(s) 326, 742, 760, 910
Cfr13I GGNCC 9 cut(s) 4, 11, 12, 103, 133, 250, 382, 618, 636
Cfr42I CCGCGG 1 cut(s) 109
CseI GACGC 3 cut(s) 427, 634, 638
CsiI ACCWGGT 1 cut(s) 696
Csp6I GTAC 2 cut(s) 577, 610
CviAII CATG 3 cut(s) 235, 283, 961
CviQI GTAC 2 cut(s) 577, 610
DdeI CTNAG 2 cut(s) 812, 1245
DinI GGCGCC 1 cut(s) 585
DpnI GATC 7 cut(s) 215, 227, 302, 350, 719, 773, 861
DpnII GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
DrdI GACNNNNNNGTC 1 cut(s) 497
DriI GACNNNNNGTC 2 cut(s) 634, 1157
DseDI GACNNNNNNGTC 1 cut(s) 497
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 659
Eam1105I GACNNNNNGTC 2 cut(s) 634, 1157
EarI CTCTTC 1 cut(s) 659
EciI GGCGGA 8 cut(s) 25, 220, 400, 508, 784, 1013, 1055, 1067
Ecl136II GAGCTC 1 cut(s) 319
Eco130I CCWWGG 2 cut(s) 120, 621
Eco24I GRGCYC 2 cut(s) 15, 321
Eco47I GGWCC 3 cut(s) 250, 618, 636
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 884
EcoICRI GAGCTC 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 12
EcoRII CCWGG 2 cut(s) 246, 696
EcoT14I CCWWGG 2 cut(s) 120, 621
EcoT38I GRGCYC 2 cut(s) 15, 321
EgeI GGCGCC 1 cut(s) 585
EheI GGCGCC 1 cut(s) 585
ErhI CCWWGG 2 cut(s) 120, 621
Esp3I CGTCTC 2 cut(s) 248, 412
FaeI CATG 3 cut(s) 238, 286, 964
FaqI GGGAC 2 cut(s) 580, 1295
FatI CATG 3 cut(s) 234, 282, 960
FauI CCCGC 3 cut(s) 392, 557, 1186
FokI GGATG 5 cut(s) 109, 635, 949, 1093, 1126
FriOI GRGCYC 2 cut(s) 15, 321
FspBI CTAG 1 cut(s) 869
GlaI GCGC 3 cut(s) 239, 585, 765
GsaI CCCAGC 1 cut(s) 104
GsuI CTGGAG 1 cut(s) 230
HaeII RGCGCY 1 cut(s) 587
HgaI GACGC 3 cut(s) 427, 634, 638
HhaI GCGC 3 cut(s) 240, 586, 766
Hin1I GRCGYC 4 cut(s) 438, 584, 645, 924
Hin1II CATG 3 cut(s) 238, 286, 964
Hin6I GCGC 3 cut(s) 238, 584, 764
HinP1I GCGC 3 cut(s) 238, 584, 764
HinfI GANTC 4 cut(s) 154, 374, 513, 568
HphI GGTGA 1 cut(s) 437
Hpy166II GTNNAC 2 cut(s) 579, 1023
Hpy188I TCNGA 6 cut(s) 77, 213, 505, 512, 864, 877
Hpy188III TCNNGA 3 cut(s) 847, 1216, 1244
Hpy8I GTNNAC 2 cut(s) 579, 1023
HpyAV CCTTC 4 cut(s) 39, 829, 844, 1039
HpyCH4III ACNGT 1 cut(s) 1307
HpyCH4IV ACGT 5 cut(s) 453, 735, 924, 1156, 1284
HpyCH4V TGCA 1 cut(s) 709
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 47, 50, 111, 581, 592, 1034
HpyF3I CTNAG 2 cut(s) 812, 1245
HpySE526I ACGT 5 cut(s) 453, 735, 924, 1156, 1284
Hsp92I GRCGYC 4 cut(s) 438, 584, 645, 924
Hsp92II CATG 3 cut(s) 238, 286, 964
HspAI GCGC 3 cut(s) 238, 584, 764
KasI GGCGCC 1 cut(s) 583
KroI GCCGGC 1 cut(s) 910
KroNI GCCGGC 1 cut(s) 912
KspI CCGCGG 1 cut(s) 109
Kzo9I GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
LmnI GCTCC 5 cut(s) 205, 316, 529, 789, 1008
Lsp1109I GCAGC 5 cut(s) 123, 412, 544, 869, 1236
LweI GCATC 2 cut(s) 87, 696
MabI ACCWGGT 1 cut(s) 696
MaeI CTAG 1 cut(s) 869
MaeII ACGT 5 cut(s) 453, 735, 924, 1156, 1284
MalI GATC 7 cut(s) 215, 227, 302, 350, 719, 773, 861
MboI GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
MboII GAAGA 3 cut(s) 646, 727, 1279
MflI RGATCY 5 cut(s) 225, 300, 348, 717, 859
MhlI GDGCHC 3 cut(s) 15, 321, 597
MlsI TGGCCA 1 cut(s) 287
MluCI AATT 1 cut(s) 896
MluI ACGCGT 2 cut(s) 630, 942
MluNI TGGCCA 1 cut(s) 287
Mly113I GGCGCC 1 cut(s) 584
MlyI GAGTC 4 cut(s) 148, 383, 507, 562
MmeI TCCRAC 2 cut(s) 745, 900
Mox20I TGGCCA 1 cut(s) 287
MreI CGCCGGCG 1 cut(s) 910
MroNI GCCGGC 1 cut(s) 910
MroXI GAANNNNTTC 1 cut(s) 944
MscI TGGCCA 1 cut(s) 287
MseI TTAA 1 cut(s) 168
MslI CAYNNNNRTG 1 cut(s) 311
Msp20I TGGCCA 1 cut(s) 287
MspA1I CMGCKG 1 cut(s) 108
MspR9I CCNGG 4 cut(s) 221, 248, 602, 698
MvaI CCWGG 2 cut(s) 248, 698
MvnI CGCG 8 cut(s) 108, 200, 450, 632, 729, 766, 808, 944
MwoI GCNNNNNNNGC 7 cut(s) 44, 47, 50, 111, 581, 592, 1034
NaeI GCCGGC 1 cut(s) 912
NarI GGCGCC 1 cut(s) 584
NciI CCSGG 2 cut(s) 221, 602
NdeII GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
NgoMIV GCCGGC 1 cut(s) 910
NlaIII CATG 3 cut(s) 238, 286, 964
NlaIV GGNNCC 6 cut(s) 13, 14, 207, 585, 619, 845
NspV TTCGAA 1 cut(s) 755
PcsI WCGNNNNNNNCGW 4 cut(s) 156, 435, 447, 486
PdiI GCCGGC 1 cut(s) 912
PdmI GAANNNNTTC 1 cut(s) 944
PfoI TCCNGGA 2 cut(s) 219, 246
PleI GAGTC 4 cut(s) 148, 382, 507, 562
PluTI GGCGCC 1 cut(s) 587
PpsI GAGTC 4 cut(s) 148, 382, 507, 562
PshAI GACNNNNGTC 1 cut(s) 158
Psp124BI GAGCTC 1 cut(s) 321
Psp6I CCWGG 2 cut(s) 246, 696
PspFI CCCAGC 1 cut(s) 100
PspGI CCWGG 2 cut(s) 246, 696
PspN4I GGNNCC 6 cut(s) 13, 14, 207, 585, 619, 845
PspOMI GGGCCC 1 cut(s) 11
PspPI GGNCC 9 cut(s) 4, 11, 12, 103, 133, 250, 382, 618, 636
PsuI RGATCY 5 cut(s) 225, 300, 348, 717, 859
RsaI GTAC 2 cut(s) 578, 611
RsaNI GTAC 2 cut(s) 577, 610
RseI CAYNNNNRTG 1 cut(s) 311
SacI GAGCTC 1 cut(s) 321
SacII CCGCGG 1 cut(s) 109
SaqAI TTAA 1 cut(s) 168
Sau3AI GATC 7 cut(s) 213, 225, 300, 348, 717, 771, 859
Sau96I GGNCC 9 cut(s) 4, 11, 12, 103, 133, 250, 382, 618, 636
SchI GAGTC 4 cut(s) 148, 383, 507, 562
ScrFI CCNGG 4 cut(s) 221, 248, 602, 698
SduI GDGCHC 3 cut(s) 15, 321, 597
SexAI ACCWGGT 1 cut(s) 696
SfaNI GCATC 2 cut(s) 87, 696
SfoI GGCGCC 1 cut(s) 585
Sfr303I CCGCGG 1 cut(s) 109
SfuI TTCGAA 1 cut(s) 755
SgrAI CRCCGGYG 2 cut(s) 326, 910
SgrBI CCGCGG 1 cut(s) 109
SinI GGWCC 3 cut(s) 250, 618, 636
SmiMI CAYNNNNRTG 1 cut(s) 311
Sse9I AATT 1 cut(s) 896
SspDI GGCGCC 1 cut(s) 583
SspMI CTAG 1 cut(s) 869
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 4 cut(s) 219, 246, 600, 696
StyI CCWWGG 2 cut(s) 120, 621
TaaI ACNGT 1 cut(s) 1307
TaiI ACGT 5 cut(s) 456, 738, 927, 1159, 1287
TaqI TCGA 7 cut(s) 177, 477, 684, 755, 789, 948, 993
TasI AATT 1 cut(s) 896
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TseI GCWGC 5 cut(s) 111, 400, 532, 882, 1249
TspDTI ATGAA 1 cut(s) 953
VpaK11BI GGWCC 3 cut(s) 250, 618, 636
XmnI GAANNNNTTC 1 cut(s) 944
XspI CTAG 1 cut(s) 869
ZraI GACGTC 1 cut(s) 925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.