Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0014951

Physical Location & Seq

Genomic Coordinates Forward (+)

5450099 .. 5451906

Gene Structure 1808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG029300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGAAACTACGACGAAGGGTAGACTTGGAAAACCAAAACCAAATATGCTATAAAACCCGAGACCAAAGCAAATCATACCTAATCGTTCTACACTGTCTGTGTTACTCTGCGCCTACTTTCCCCAACCCAGCCATGGGCCGTGGGCCCCCACCCCCCACCTCCGCCGCCTCCACCACCACCTCCACCCTTCTCGGCAAGTACCAACTGGGCCGGCTGCTGGGGCGGGGCAGCTTCGCCAAGGTCTGCAAGGCCCAGTCCTTAGCCGACGAAACCCCCGTCGCCATTAAAATCATCGACAAGCTCAAAACCGACGCAAACATGGAGCCTCTGATACTCCGGGAGATCTCCGCCATGCGCCGCCTCCAGGACCACCCTAACATCCTCAAAATCCACGAGGTCATGGCCACGAAGTCCAAGATCTACATCGTCGTCGAGCTCGCCACCGGCGGCGAGCTCTTCGCCAAGATCTCACGCTACGGCAAGTTGCCGGAATCCCTCGCCCGCCGCTACTTCCAGCAGCTCGTCTCCGCCCTCCGCTTCTGCCACGAAAACGGCGTCGCTCACCGCGACGTGAAGCCACAGAACCTCCTCCTCGACGGCAACGGAAACCTCAAGGTCTCCGATTTCGGACTCTCTGCCCTGCCGGAGCAGCTCAAAAACGGCCTCCTCCACACGGCTTGTGGAACTCCGGCTTACACGGCGCCGGAGGTTCTGTACCGGGTCGGGTACGACGGATCCAAGGCCGATGCGTGGTCCTGCGGCGTCATCCTCTTCGTCCTCCTCGCCGGACACTTGCCGTTCGACGACAGCAATCTGGTGGCGATGCATAAGAAGATTCAGCGCCGGGATTACGTCATCCCGGCGACGATTTCGAAGCCGGCGCGGCGGATCATATATCAGCTGCTCGACCCGAACCCGAACACGAGGCTGAGCATAGAGGCCGTCACGGAAAAGGCGTGGTTCCAAAAGGCTATAGATTTGAAGTTACTTTCCGATAGCTGCGATATAATCGAGGCGGAGAAACCAAAATGCGACGGCGTTTCAGGGATGAACGCGTTCGATATAATCTCCATGTCGTCGGGGCTGGATTTGTCGGGGCTTTTCGAGGCGGAGAACAGAAGCGAGAGGCGGTTCACGGCGAATGTGCCCGCGGAGAAGGTGGCGGAGAAGGTGGGGGAGGTTGGGGAGAGGCTGGGGTATAAAGCGGAGAGAGGGAAGGGTGGGATGAGCGTTGGGTTGGGGAAAGGGAAAGAACGACGTGTCGTTTTGACGGTGGAGATGATGGAGGTGGCGGCGGGTTTGGTTTTAGGGGAAGTGAAGATGGTGGAGGGTGGGGTGGAGTTTCCCGAGCTTCTTTGGGAGGACTTGAAAACTTGGTTAGGGGACGTCGTGGTGTCATGGCAAAACGGTGGCGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03060 ko03070 ko04113 ko04138 map03060 map03070 map04113 map04138

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

472

Amino Acids

52.0

Weight (kDa)

8.86

Isoelectric Point (pI)

41.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	67 - 321	2.6e-69	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	68 - 317	3e-35	Protein tyrosine and serine/threonine kinase
NAF	PF03822	350 - 403	8.6e-19	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23000 AT4G14580
fragaria_vesca	FvH4_4g02010
malus_domestica	MD13G1203400.v1.1 MD16G1204900.v1.1
prunus_persica	Prupe.1G026400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0388971
rosa_laevigata	RLG00000010002
rosa_multiflora	Rmu_sc0001395.1_g000009 Rmu_sc0012612.1_g000003
rosa_roxburghii	Rroxscaffold_5G00335300
rosa_rugosa	Rorug03G0321800.1
rosa_samantha	Rh4AG026300 Rh4BG019500 Rh4CG029300
rosa_wichuraiana	Rw4G001940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1389
AccB1I	GGYRCC	1 cut(s)	700
AccI	GTMKAC	1 cut(s)	21
AccII	CGCG	4 cut(s)	567, 883, 1055, 1151
AclWI	GGATC	3 cut(s)	729, 742, 896
AcoI	YGGCCR	1 cut(s)	402
AcyI	GRCGYC	4 cut(s)	555, 701, 762, 1386
AfaI	GTAC	3 cut(s)	200, 716, 728
AfiI	CCNNNNNNNGG	6 cut(s)	133, 134, 217, 364, 673, 750
AflIII	ACRYGT	2 cut(s)	1053, 1258
AgsI	TTSAA	2 cut(s)	982, 1369
AjiI	CACGTC	2 cut(s)	571, 1259
AjnI	CCWGG	1 cut(s)	363
AluBI	AGCT	9 cut(s)	231, 301, 436, 454, 520, 652, 901, 999, 1351
AluI	AGCT	9 cut(s)	231, 301, 436, 454, 520, 652, 901, 999, 1351
Alw21I	GWGCWC	2 cut(s)	438, 456
Alw26I	GTCTC	3 cut(s)	54, 529, 622
AlwI	GGATC	3 cut(s)	729, 742, 896
Ama87I	CYCGRG	2 cut(s)	57, 1346
AoxI	GGCC	8 cut(s)	136, 143, 208, 249, 402, 661, 741, 939
ApaI	GGGCCC	1 cut(s)	147
ApeKI	GCWGC	6 cut(s)	214, 228, 517, 649, 901, 999
ArsI	GACNNNNNNTTYG	4 cut(s)	261, 293, 540, 572
Asp700I	GAANNNNTTC	1 cut(s)	1055
AspLEI	GCGC	5 cut(s)	112, 357, 703, 843, 883
AspS9I	GGNCC	7 cut(s)	136, 143, 144, 208, 250, 367, 753
AsuC2I	CCSGG	4 cut(s)	338, 719, 845, 860
AsuHPI	GGTGA	1 cut(s)	554
AsuII	TTCGAA	1 cut(s)	872
AvaI	CYCGRG	2 cut(s)	57, 1346
AvaII	GGWCC	2 cut(s)	367, 753
BaeGI	GKGCMC	2 cut(s)	147, 1149
BalI	TGGCCA	1 cut(s)	404
BamHI	GGATCC	1 cut(s)	734
BanI	GGYRCC	1 cut(s)	700
BanII	GRGCYC	3 cut(s)	147, 438, 456
BauI	CACGAG	2 cut(s)	392, 922
Bbv12I	GWGCWC	2 cut(s)	438, 456
BbvI	GCAGC	6 cut(s)	201, 240, 529, 661, 888, 986
BccI	CCATC	2 cut(s)	1276, 1315
BciT130I	CCWGG	1 cut(s)	365
BcnI	CCSGG	4 cut(s)	338, 719, 845, 860
BcoDI	GTCTC	3 cut(s)	54, 529, 622
BfmI	CTRYAG	1 cut(s)	972
BfoI	RGCGCY	2 cut(s)	704, 844
BglI	GCCNNNNNGGC	1 cut(s)	883
BglII	AGATCT	3 cut(s)	342, 417, 465
BlpI	GCTNAGC	1 cut(s)	929
Bme1390I	CCNGG	5 cut(s)	338, 365, 719, 845, 860
Bme18I	GGWCC	2 cut(s)	367, 753
BmeT110I	CYCGRG	2 cut(s)	57, 1346
BmgBI	CACGTC	2 cut(s)	571, 1259
BmgT120I	GGNCC	7 cut(s)	136, 143, 144, 208, 250, 367, 753
BmiI	GGNNCC	6 cut(s)	145, 146, 324, 702, 736, 962
BmrFI	CCNGG	5 cut(s)	338, 365, 719, 845, 860
BmrI	ACTGGG	2 cut(s)	215, 247
BmsI	GCATC	2 cut(s)	736, 813
BmuI	ACTGGG	2 cut(s)	215, 247
BpmI	CTGGAG	1 cut(s)	347
Bpu10I	CCTNAGC	1 cut(s)	259
Bpu1102I	GCTNAGC	1 cut(s)	929
Bpu14I	TTCGAA	1 cut(s)	872
BpuEI	CTTGAG	1 cut(s)	596
BpuMI	CCSGG	4 cut(s)	338, 719, 845, 860
BsaBI	GATNNNNATC	1 cut(s)	422
BsaHI	GRCGYC	4 cut(s)	555, 701, 762, 1386
BsaI	GGTCTC	2 cut(s)	54, 622
BsaJI	CCNNGG	5 cut(s)	132, 139, 237, 738, 1149
BsaXI	ACNNNNNCTCC	4 cut(s)	570, 600, 698, 728
Bsc4I	CCNNNNNNNGG	6 cut(s)	133, 134, 217, 364, 673, 750
Bse118I	RCCGGY	3 cut(s)	210, 443, 877
Bse1I	ACTGG	2 cut(s)	210, 253
Bse8I	GATNNNNATC	1 cut(s)	422
BseBI	CCWGG	1 cut(s)	365
BseDI	CCNNGG	5 cut(s)	132, 139, 237, 738, 1149
BseGI	GGATG	5 cut(s)	378, 765, 855, 1053, 1230
BseJI	GATNNNNATC	1 cut(s)	422
BseLI	CCNNNNNNNGG	6 cut(s)	133, 134, 217, 364, 673, 750
BseMII	CTCAG	1 cut(s)	920
BseNI	ACTGG	2 cut(s)	210, 253
BseRI	GAGGAG	4 cut(s)	578, 581, 656, 770
BseSI	GKGCMC	2 cut(s)	147, 1149
BseXI	GCAGC	6 cut(s)	201, 240, 529, 661, 888, 986
BseYI	CCCAGC	3 cut(s)	127, 217, 1192
Bsh1236I	CGCG	4 cut(s)	567, 883, 1055, 1151
BshFI	GGCC	8 cut(s)	138, 145, 210, 251, 404, 663, 743, 941
BshNI	GGYRCC	1 cut(s)	700
BsiHKAI	GWGCWC	2 cut(s)	438, 456
BsiHKCI	CYCGRG	2 cut(s)	57, 1346
BslFI	GGGAC	1 cut(s)	1397
BslI	CCNNNNNNNGG	6 cut(s)	133, 134, 217, 364, 673, 750
BsmAI	GTCTC	3 cut(s)	54, 529, 622
BsmBI	CGTCTC	1 cut(s)	529
BsmFI	GGGAC	1 cut(s)	1397
BsnI	GGCC	8 cut(s)	138, 145, 210, 251, 404, 663, 743, 941
Bso31I	GGTCTC	2 cut(s)	54, 622
BsoBI	CYCGRG	2 cut(s)	57, 1346
Bsp119I	TTCGAA	1 cut(s)	872
Bsp120I	GGGCCC	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	147, 438, 456, 1149
Bsp143I	GATC	5 cut(s)	342, 417, 465, 734, 888
Bsp1720I	GCTNAGC	1 cut(s)	929
Bsp19I	CCATGG	1 cut(s)	132
BspANI	GGCC	8 cut(s)	138, 145, 210, 251, 404, 663, 743, 941
BspCNI	CTCAG	1 cut(s)	921
BspFNI	CGCG	4 cut(s)	567, 883, 1055, 1151
BspLI	GGNNCC	6 cut(s)	145, 146, 324, 702, 736, 962
BspPI	GGATC	3 cut(s)	729, 742, 896
BspQI	GCTCTTC	1 cut(s)	461
BspT104I	TTCGAA	1 cut(s)	872
BspT107I	GGYRCC	1 cut(s)	700
BspTNI	GGTCTC	2 cut(s)	54, 622
BsrFI	RCCGGY	3 cut(s)	210, 443, 877
BsrI	ACTGG	2 cut(s)	210, 253
BssAI	RCCGGY	3 cut(s)	210, 443, 877
BssECI	CCNNGG	5 cut(s)	132, 139, 237, 738, 1149
BssMI	GATC	5 cut(s)	342, 417, 465, 734, 888
BssNI	GRCGYC	4 cut(s)	555, 701, 762, 1386
BssSI	CACGAG	2 cut(s)	392, 922
BssT1I	CCWWGG	3 cut(s)	132, 237, 738
Bst2BI	CACGAG	2 cut(s)	392, 922
Bst2UI	CCWGG	1 cut(s)	365
Bst4CI	ACNGT	3 cut(s)	95, 1273, 1409
Bst6I	CTCTTC	2 cut(s)	461, 776
BstACI	GRCGYC	4 cut(s)	555, 701, 762, 1386
BstBI	TTCGAA	1 cut(s)	872
BstC8I	GCNNGC	6 cut(s)	212, 438, 452, 502, 879, 1149
BstDEI	CTNAG	2 cut(s)	259, 929
BstDSI	CCRYGG	3 cut(s)	132, 139, 1149
BstF5I	GGATG	5 cut(s)	378, 765, 855, 1053, 1230
BstFNI	CGCG	4 cut(s)	567, 883, 1055, 1151
BstH2I	RGCGCY	2 cut(s)	704, 844
BstHHI	GCGC	5 cut(s)	112, 357, 703, 843, 883
BstKTI	GATC	5 cut(s)	345, 420, 468, 737, 891
BstMAI	GTCTC	3 cut(s)	54, 529, 622
BstMBI	GATC	5 cut(s)	342, 417, 465, 734, 888
BstMWI	GCNNNNNNNGC	4 cut(s)	220, 649, 698, 883
BstNI	CCWGG	1 cut(s)	365
BstSCI	CCNGG	5 cut(s)	336, 363, 717, 843, 858
BstSFI	CTRYAG	1 cut(s)	972
BstSLI	GKGCMC	2 cut(s)	147, 1149
BstUI	CGCG	4 cut(s)	567, 883, 1055, 1151
BstV1I	GCAGC	6 cut(s)	201, 240, 529, 661, 888, 986
BstX2I	RGATCY	4 cut(s)	342, 417, 465, 734
BstYI	RGATCY	4 cut(s)	342, 417, 465, 734
BsuRI	GGCC	8 cut(s)	138, 145, 210, 251, 404, 663, 743, 941
BtgI	CCRYGG	3 cut(s)	132, 139, 1149
BtgZI	GCGATG	1 cut(s)	836
BtrI	CACGTC	2 cut(s)	571, 1259
BtsCI	GGATG	5 cut(s)	378, 765, 855, 1053, 1230
BtsIMutI	CAGTG	1 cut(s)	91
Cac8I	GCNNGC	6 cut(s)	212, 438, 452, 502, 879, 1149
CfoI	GCGC	5 cut(s)	112, 357, 703, 843, 883
Cfr10I	RCCGGY	3 cut(s)	210, 443, 877
Cfr13I	GGNCC	7 cut(s)	136, 143, 144, 208, 250, 367, 753
Cfr42I	CCGCGG	1 cut(s)	1152
CseI	GACGC	3 cut(s)	320, 544, 751
Csp6I	GTAC	3 cut(s)	199, 715, 727
CspCI	CAANNNNNGTGG	2 cut(s)	659, 694
CviAII	CATG	6 cut(s)	133, 319, 352, 400, 1072, 1398
CviQI	GTAC	3 cut(s)	199, 715, 727
DdeI	CTNAG	2 cut(s)	259, 929
DinI	GGCGCC	1 cut(s)	702
DpnI	GATC	5 cut(s)	344, 419, 467, 736, 890
DpnII	GATC	5 cut(s)	342, 417, 465, 734, 888
EaeI	YGGCCR	1 cut(s)	402
Eam1104I	CTCTTC	2 cut(s)	461, 776
EarI	CTCTTC	2 cut(s)	461, 776
EciI	GGCGGA	7 cut(s)	151, 337, 517, 901, 1031, 1124, 1178
Ecl136II	GAGCTC	2 cut(s)	436, 454
Eco130I	CCWWGG	3 cut(s)	132, 237, 738
Eco24I	GRGCYC	3 cut(s)	147, 438, 456
Eco31I	GGTCTC	2 cut(s)	54, 622
Eco47I	GGWCC	2 cut(s)	367, 753
Eco53kI	GAGCTC	2 cut(s)	436, 454
Eco88I	CYCGRG	2 cut(s)	57, 1346
EcoICRI	GAGCTC	2 cut(s)	436, 454
EcoO109I	RGGNCCY	1 cut(s)	144
EcoRII	CCWGG	1 cut(s)	363
EcoT14I	CCWWGG	3 cut(s)	132, 237, 738
EcoT22I	ATGCAT	1 cut(s)	828
EcoT38I	GRGCYC	3 cut(s)	147, 438, 456
EgeI	GGCGCC	1 cut(s)	702
EheI	GGCGCC	1 cut(s)	702
ErhI	CCWWGG	3 cut(s)	132, 237, 738
Esp3I	CGTCTC	1 cut(s)	529
FaeI	CATG	6 cut(s)	136, 322, 355, 403, 1075, 1401
FaqI	GGGAC	1 cut(s)	1397
FatI	CATG	6 cut(s)	132, 318, 351, 399, 1071, 1397
FauI	CCCGC	4 cut(s)	216, 509, 1156, 1288
FblI	GTMKAC	1 cut(s)	21
FokI	GGATG	5 cut(s)	365, 752, 842, 1060, 1237
FriOI	GRGCYC	3 cut(s)	147, 438, 456
GlaI	GCGC	5 cut(s)	111, 356, 702, 842, 882
GsaI	CCCAGC	3 cut(s)	131, 221, 1196
GsuI	CTGGAG	1 cut(s)	347
HaeII	RGCGCY	2 cut(s)	704, 844
HaeIII	GGCC	8 cut(s)	138, 145, 210, 251, 404, 663, 743, 941
HgaI	GACGC	3 cut(s)	320, 544, 751
HhaI	GCGC	5 cut(s)	112, 357, 703, 843, 883
Hin1I	GRCGYC	4 cut(s)	555, 701, 762, 1386
Hin1II	CATG	6 cut(s)	136, 322, 355, 403, 1075, 1401
Hin6I	GCGC	5 cut(s)	110, 355, 701, 841, 881
HinP1I	GCGC	5 cut(s)	110, 355, 701, 841, 881
HinfI	GANTC	3 cut(s)	491, 630, 835
HphI	GGTGA	1 cut(s)	554
Hpy166II	GTNNAC	2 cut(s)	22, 1134
Hpy188I	TCNGA	4 cut(s)	330, 622, 629, 994
Hpy188III	TCNNGA	1 cut(s)	1346
Hpy8I	GTNNAC	2 cut(s)	22, 1134
HpyAV	CCTTC	5 cut(s)	9, 197, 1150, 1162, 1210
HpyCH4III	ACNGT	3 cut(s)	95, 1273, 1409
HpyCH4IV	ACGT	4 cut(s)	570, 852, 1258, 1386
HpyCH4V	TGCA	2 cut(s)	246, 826
HpyF10VI	GCNNNNNNNGC	4 cut(s)	220, 649, 698, 883
HpyF3I	CTNAG	2 cut(s)	259, 929
HpySE526I	ACGT	4 cut(s)	570, 852, 1258, 1386
Hsp92I	GRCGYC	4 cut(s)	555, 701, 762, 1386
Hsp92II	CATG	6 cut(s)	136, 322, 355, 403, 1075, 1401
HspAI	GCGC	5 cut(s)	110, 355, 701, 841, 881
KasI	GGCGCC	1 cut(s)	700
KroI	GCCGGC	2 cut(s)	210, 877
KroNI	GCCGGC	2 cut(s)	212, 879
KspI	CCGCGG	1 cut(s)	1152
Kzo9I	GATC	5 cut(s)	342, 417, 465, 734, 888
LguI	GCTCTTC	1 cut(s)	461
LmnI	GCTCC	2 cut(s)	322, 646
Lsp1109I	GCAGC	6 cut(s)	201, 240, 529, 661, 888, 986
LweI	GCATC	2 cut(s)	736, 813
MaeII	ACGT	4 cut(s)	570, 852, 1258, 1386
MaeIII	GTNAC	3 cut(s)	101, 943, 984
MalI	GATC	5 cut(s)	344, 419, 467, 736, 890
MboI	GATC	5 cut(s)	342, 417, 465, 734, 888
MboII	GAAGA	4 cut(s)	448, 763, 844, 1330
MflI	RGATCY	4 cut(s)	342, 417, 465, 734
MhlI	GDGCHC	4 cut(s)	147, 438, 456, 1149
MlsI	TGGCCA	1 cut(s)	404
MluI	ACGCGT	1 cut(s)	1053
MluNI	TGGCCA	1 cut(s)	404
Mly113I	GGCGCC	1 cut(s)	701
MlyI	GAGTC	1 cut(s)	624
Mox20I	TGGCCA	1 cut(s)	404
Mph1103I	ATGCAT	1 cut(s)	828
MroNI	GCCGGC	2 cut(s)	210, 877
MroXI	GAANNNNTTC	1 cut(s)	1055
MscI	TGGCCA	1 cut(s)	404
MseI	TTAA	2 cut(s)	285, 1417
Msp20I	TGGCCA	1 cut(s)	404
MspA1I	CMGCKG	2 cut(s)	901, 1151
MspR9I	CCNGG	5 cut(s)	338, 365, 719, 845, 860
MvaI	CCWGG	1 cut(s)	365
MvnI	CGCG	4 cut(s)	567, 883, 1055, 1151
MwoI	GCNNNNNNNGC	4 cut(s)	220, 649, 698, 883
NaeI	GCCGGC	2 cut(s)	212, 879
NarI	GGCGCC	1 cut(s)	701
NciI	CCSGG	4 cut(s)	338, 719, 845, 860
NcoI	CCATGG	1 cut(s)	132
NdeII	GATC	5 cut(s)	342, 417, 465, 734, 888
NgoMIV	GCCGGC	2 cut(s)	210, 877
NlaIII	CATG	6 cut(s)	136, 322, 355, 403, 1075, 1401
NlaIV	GGNNCC	6 cut(s)	145, 146, 324, 702, 736, 962
NmeAIII	GCCGAG	1 cut(s)	171
NmuCI	GTSAC	1 cut(s)	943
NsiI	ATGCAT	1 cut(s)	828
NspV	TTCGAA	1 cut(s)	872
PciSI	GCTCTTC	1 cut(s)	461
PcsI	WCGNNNNNNNCGW	4 cut(s)	273, 552, 564, 953
PdiI	GCCGGC	2 cut(s)	212, 879
PdmI	GAANNNNTTC	1 cut(s)	1055
PfeI	GAWTC	2 cut(s)	491, 835
PfoI	TCCNGGA	2 cut(s)	336, 363
PleI	GAGTC	1 cut(s)	624
PluTI	GGCGCC	1 cut(s)	704
PpsI	GAGTC	1 cut(s)	624
Psp124BI	GAGCTC	2 cut(s)	438, 456
Psp6I	CCWGG	1 cut(s)	363
PspFI	CCCAGC	3 cut(s)	127, 217, 1192
PspGI	CCWGG	1 cut(s)	363
PspN4I	GGNNCC	6 cut(s)	145, 146, 324, 702, 736, 962
PspOMI	GGGCCC	1 cut(s)	143
PspPI	GGNCC	7 cut(s)	136, 143, 144, 208, 250, 367, 753
PsuI	RGATCY	4 cut(s)	342, 417, 465, 734
PvuII	CAGCTG	1 cut(s)	901
RsaI	GTAC	3 cut(s)	200, 716, 728
RsaNI	GTAC	3 cut(s)	199, 715, 727
SacI	GAGCTC	2 cut(s)	438, 456
SacII	CCGCGG	1 cut(s)	1152
SapI	GCTCTTC	1 cut(s)	461
SaqAI	TTAA	2 cut(s)	285, 1417
Sau3AI	GATC	5 cut(s)	342, 417, 465, 734, 888
Sau96I	GGNCC	7 cut(s)	136, 143, 144, 208, 250, 367, 753
SchI	GAGTC	1 cut(s)	624
ScrFI	CCNGG	5 cut(s)	338, 365, 719, 845, 860
SduI	GDGCHC	4 cut(s)	147, 438, 456, 1149
SfaNI	GCATC	2 cut(s)	736, 813
SfcI	CTRYAG	1 cut(s)	972
SfoI	GGCGCC	1 cut(s)	702
Sfr303I	CCGCGG	1 cut(s)	1152
SfuI	TTCGAA	1 cut(s)	872
SgrAI	CRCCGGYG	1 cut(s)	443
SgrBI	CCGCGG	1 cut(s)	1152
SinI	GGWCC	2 cut(s)	367, 753
SmlI	CTYRAG	1 cut(s)	611
SmoI	CTYRAG	1 cut(s)	611
SspDI	GGCGCC	1 cut(s)	700
SstI	GAGCTC	2 cut(s)	438, 456
StyD4I	CCNGG	5 cut(s)	336, 363, 717, 843, 858
StyI	CCWWGG	3 cut(s)	132, 237, 738
TaaI	ACNGT	3 cut(s)	95, 1273, 1409
TaiI	ACGT	4 cut(s)	573, 855, 1261, 1389
TaqI	TCGA	9 cut(s)	294, 432, 594, 801, 872, 906, 1011, 1059, 1104
TauI	GCSGC	7 cut(s)	167, 360, 450, 507, 762, 886, 1295
TfiI	GAWTC	2 cut(s)	491, 835
Tru1I	TTAA	2 cut(s)	285, 1417
Tru9I	TTAA	2 cut(s)	285, 1417
TscAI	CASTG	1 cut(s)	98
TseFI	GTSAC	1 cut(s)	943
TseI	GCWGC	6 cut(s)	214, 228, 517, 649, 901, 999
Tsp45I	GTSAC	1 cut(s)	943
TspDTI	ATGAA	2 cut(s)	17, 1064
TspGWI	ACGGA	3 cut(s)	618, 747, 962
TspRI	CASTG	1 cut(s)	98
VpaK11BI	GGWCC	2 cut(s)	367, 753
XcmI	CCANNNNNNNNNTGG	2 cut(s)	130, 677
XmiI	GTMKAC	1 cut(s)	21
XmnI	GAANNNNTTC	1 cut(s)	1055
ZraI	GACGTC	1 cut(s)	1387
Zsp2I	ATGCAT	1 cut(s)	828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.