No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33390 AT2G33390 |
| fragaria_vesca | FvH4_4g04340 FvH4_4g04340 |
| malus_domestica | MD13G1219400.v1.1 MD16G1224800.v1.1 |
| prunus_persica | Prupe.1G046100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0394791 RchiOBHm_Chr4g0394821 |
| rosa_laevigata | RLG00000009660 |
| rosa_multiflora | Rmu_sc0005356.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00339830 |
| rosa_rugosa | Rorug03G0361300.1 Rorug03G0361400.1 |
| rosa_samantha | Rh4AG055200 Rh4BG053100 Rh4CG060000 Rh4DG051700 |
| rosa_wichuraiana | Rw4G004410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 130 |
| AciI | CCGC | 1 cut(s) | 175 |
| AcyI | GRCGYC | 1 cut(s) | 131 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AluBI | AGCT | 1 cut(s) | 211 |
| AluI | AGCT | 1 cut(s) | 211 |
| AspLEI | GCGC | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 80, 109 |
| BanI | GGYRCC | 1 cut(s) | 130 |
| BbsI | GAAGAC | 1 cut(s) | 164 |
| BccI | CCATC | 3 cut(s) | 5, 56, 296 |
| BfoI | RGCGCY | 1 cut(s) | 134 |
| BmiI | GGNNCC | 1 cut(s) | 132 |
| BpiI | GAAGAC | 1 cut(s) | 164 |
| BsaHI | GRCGYC | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseDI | CCNNGG | 1 cut(s) | 134 |
| BseGI | GGATG | 2 cut(s) | 16, 112 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsgI | GTGCAG | 1 cut(s) | 203 |
| BshNI | GGYRCC | 1 cut(s) | 130 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BspACI | CCGC | 1 cut(s) | 175 |
| BspLI | GGNNCC | 1 cut(s) | 132 |
| BspT107I | GGYRCC | 1 cut(s) | 130 |
| BssECI | CCNNGG | 1 cut(s) | 134 |
| BssNI | GRCGYC | 1 cut(s) | 131 |
| BssT1I | CCWWGG | 1 cut(s) | 134 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstACI | GRCGYC | 1 cut(s) | 131 |
| BstF5I | GGATG | 2 cut(s) | 16, 112 |
| BstH2I | RGCGCY | 1 cut(s) | 134 |
| BstHHI | GCGC | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 181 |
| BstV2I | GAAGAC | 1 cut(s) | 164 |
| BtsCI | GGATG | 2 cut(s) | 16, 112 |
| BtsI | GCAGTG | 1 cut(s) | 191 |
| BtsIMutI | CAGTG | 1 cut(s) | 191 |
| CfoI | GCGC | 1 cut(s) | 133 |
| CviAII | CATG | 1 cut(s) | 292 |
| CviJI | RGCY | 1 cut(s) | 211 |
| CviKI_1 | RGCY | 1 cut(s) | 211 |
| DinI | GGCGCC | 1 cut(s) | 132 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco130I | CCWWGG | 1 cut(s) | 134 |
| EcoT14I | CCWWGG | 1 cut(s) | 134 |
| EgeI | GGCGCC | 1 cut(s) | 132 |
| EheI | GGCGCC | 1 cut(s) | 132 |
| ErhI | CCWWGG | 1 cut(s) | 134 |
| FaeI | CATG | 1 cut(s) | 295 |
| FaiI | YATR | 4 cut(s) | 231, 281, 283, 293 |
| FatI | CATG | 1 cut(s) | 291 |
| FauNDI | CATATG | 1 cut(s) | 281 |
| FokI | GGATG | 2 cut(s) | 23, 119 |
| GlaI | GCGC | 1 cut(s) | 132 |
| HaeII | RGCGCY | 1 cut(s) | 134 |
| HhaI | GCGC | 1 cut(s) | 133 |
| Hin1I | GRCGYC | 1 cut(s) | 131 |
| Hin1II | CATG | 1 cut(s) | 295 |
| Hin6I | GCGC | 1 cut(s) | 131 |
| HinP1I | GCGC | 1 cut(s) | 131 |
| HindIII | AAGCTT | 1 cut(s) | 209 |
| HinfI | GANTC | 1 cut(s) | 251 |
| HphI | GGTGA | 3 cut(s) | 50, 80, 109 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| HpyAV | CCTTC | 1 cut(s) | 13 |
| HpyCH4V | TGCA | 3 cut(s) | 28, 184, 279 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 181 |
| Hsp92I | GRCGYC | 1 cut(s) | 131 |
| Hsp92II | CATG | 1 cut(s) | 295 |
| HspAI | GCGC | 1 cut(s) | 131 |
| KasI | GGCGCC | 1 cut(s) | 130 |
| MaeIII | GTNAC | 1 cut(s) | 248 |
| MboII | GAAGA | 4 cut(s) | 28, 122, 169, 275 |
| Mly113I | GGCGCC | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MnlI | CCTC | 7 cut(s) | 29, 42, 82, 137, 147, 211, 235 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 181 |
| NarI | GGCGCC | 1 cut(s) | 131 |
| NdeI | CATATG | 1 cut(s) | 281 |
| NlaIII | CATG | 1 cut(s) | 295 |
| NlaIV | GGNNCC | 1 cut(s) | 132 |
| NmuCI | GTSAC | 1 cut(s) | 248 |
| PleI | GAGTC | 1 cut(s) | 245 |
| PluTI | GGCGCC | 1 cut(s) | 134 |
| PpsI | GAGTC | 1 cut(s) | 245 |
| PspN4I | GGNNCC | 1 cut(s) | 132 |
| SchI | GAGTC | 1 cut(s) | 245 |
| SetI | ASST | 5 cut(s) | 40, 53, 213, 222, 246 |
| SfoI | GGCGCC | 1 cut(s) | 132 |
| SgeI | CNNG | 5 cut(s) | 147, 165, 224, 249, 288 |
| SsiI | CCGC | 1 cut(s) | 175 |
| SspDI | GGCGCC | 1 cut(s) | 130 |
| StyI | CCWWGG | 1 cut(s) | 134 |
| TaqI | TCGA | 1 cut(s) | 152 |
| TscAI | CASTG | 1 cut(s) | 191 |
| TseFI | GTSAC | 1 cut(s) | 248 |
| Tsp45I | GTSAC | 1 cut(s) | 248 |
| TspDTI | ATGAA | 2 cut(s) | 123, 246 |
| TspGWI | ACGGA | 1 cut(s) | 23 |
| TspRI | CASTG | 1 cut(s) | 191 |