FvH4_4g07970
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
7516434 .. 7520166
3733 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g07970.t1

Sequence Viewer

Length: 1371 bp
ATGCAGAACCATCATTCTTCCAAAGTCCCACACCATGGAACCAAATATAAGGAAGTACAGACATCCCCAAACCCCATCTTTAATTTGAGACAGAGAGAAAGAGATAGAGATAGAGTTCGGGTTCAGTTTGTGTCTGTTCTAGATAGTACTTCAGCTGCCCCTATAGATTTTGTTTCTTGTTTCAAGTTTGGATATTTGAAGCCAGAAATGAAATACATTAGGACAAACAGCCTGAAAAGGCTATTCTCACTCAAAAGAAGAAGCTTGGAAGAAGTCGCAAGCCCACCGAGTGTGTGCTGTAATGTTGAAGAGAGCAATGAAAGCCTCAAGAATGTTGAAGCAATAGAGCTTTCTCCAAGACCCACATGGAAATGCTTCTCCTTTGAAGAGATTTCAGATGCCACCAATGGTTTCAGCTCAGAGAATTTGGTTGGAAAAGGAGGATATGCAGAGGTGTACAGAGGAGTTTTGAAAGGTAATGAGGAAATTGCTGTGAAGAGGATCACAAAAACTGTGACTGATGAAAGGAAAGAGAAGGAGTTCTTGAATGAGATTGGAACTATTGGCCATGTTTGCCATCCAAATGTGTTGTCACTTGTGGGATGTTGCATTGACAATGGCCTTTACCTCATCTTCCATTTCTCCTCCAGAGGCTCTGTTGCTTCTCTTCTCCATGATGAAAATTTGCCACCTATGGATTGGAAAACAAGGTATAAAATAGCTATTGGGACAGGTAGAGGCCTCCATTATTTGCACAAGGGCTGCCAGAGGAGGATTATTCACAGGGACATTAAGTCCACAAACATACTATTGACTGTAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCACAATGGACTCATCACTCAATTGCTCCAATTGAAGGGACCTTTGGGCACTTGGCACCTGAGTACTATATGCATGGAATTGTGGATGAGAAAACAGATGTCTTTGCTTTTGGAGTTATTTTATTAGAGCTCATCTCAGGCAAGAAACCAGTGGATGGGTCTCACCAAAGCTTACATAGCTGGGCAAAACCAATATTAAACCAGGAAGAGATTGATCAGCTGGTAGATCCAAGGCTTAGAGGGGCCTATGATGTTACACAACTAAAAAGACTTGCCTTTGCAGGATCTCTCTGCATTCGAGCATCGCCGACATGGCGTCCTACCATGAGCGAGGTGTTGGAGGTTATGGAATTAGAAGGTGAAATAGACAAAGAGAGGTGGAAGATGCCAGAGGAAGTAGAAGAAGAGCATGATGAGTTCTGGGGTTTTGAGGATCTGGAATATGAGTTTGACAGTTCCTTCTCAGTTTCACCCCATGATTCCATTTCTACAAGAAGCCGTTAG

Protein Analysis

457

Amino Acids

52.1

Weight (kDa)

6.04

Isoelectric Point (pI)

46.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 139 - 402 2.6e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 141 - 403 2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 922
AccB7I CCANNNNNTGG 2 cut(s) 35, 1022
AclWI GGATC 4 cut(s) 509, 1088, 1159, 1308
AcoI YGGCCR 1 cut(s) 565
AcsI RAATTY 2 cut(s) 424, 682
AcuI CTGAAG 1 cut(s) 135
AcyI GRCGYC 1 cut(s) 1183
AdeI CACNNNGTG 1 cut(s) 290
AfaI GTAC 4 cut(s) 57, 148, 458, 932
AfiI CCNNNNNNNGG 3 cut(s) 35, 902, 1022
AgsI TTSAA 9 cut(s) 184, 199, 308, 338, 386, 472, 547, 827, 902
AhdI GACNNNNNGTC 2 cut(s) 793, 1182
AjnI CCWGG 1 cut(s) 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 894, 926
AluBI AGCT 9 cut(s) 155, 264, 349, 417, 722, 997, 1038, 1047, 1087
AluI AGCT 9 cut(s) 155, 264, 349, 417, 722, 997, 1038, 1047, 1087
Alw21I GWGCWC 1 cut(s) 999
Alw26I GTCTC 2 cut(s) 82, 1032
AlwI GGATC 4 cut(s) 509, 1088, 1159, 1308
AoxI GGCC 4 cut(s) 565, 619, 739, 1110
ApeKI GCWGC 2 cut(s) 155, 762
ApoI RAATTY 2 cut(s) 424, 682
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
Asp700I GAANNNNTTC 2 cut(s) 374, 539
AspS9I GGNCC 2 cut(s) 906, 1110
AsuHPI GGTGA 3 cut(s) 1022, 1238, 1329
AvaII GGWCC 1 cut(s) 906
BaeGI GKGCMC 1 cut(s) 918
BalI TGGCCA 1 cut(s) 567
BanI GGYRCC 1 cut(s) 922
BanII GRGCYC 1 cut(s) 999
Bbv12I GWGCWC 1 cut(s) 999
BbvI GCAGC 2 cut(s) 142, 749
BccI CCATC 5 cut(s) 18, 83, 585, 874, 1016
BceAI ACGGC 1 cut(s) 1350
BciT130I CCWGG 1 cut(s) 1070
BclI TGATCA 1 cut(s) 1081
BcoDI GTCTC 2 cut(s) 82, 1032
BfaI CTAG 2 cut(s) 140, 851
BfmI CTRYAG 2 cut(s) 162, 816
BglI GCCNNNNNGGC 1 cut(s) 1180
BisI GCNGC 2 cut(s) 156, 763
BlsI GCNGC 2 cut(s) 157, 764
BmcAI AGTACT 2 cut(s) 148, 932
Bme1390I CCNGG 1 cut(s) 1070
Bme18I GGWCC 1 cut(s) 906
BmeRI GACNNNNNGTC 2 cut(s) 793, 1182
BmgT120I GGNCC 2 cut(s) 906, 1110
BmiI GGNNCC 4 cut(s) 40, 907, 924, 1111
BmrFI CCNGG 1 cut(s) 1070
BmsI GCATC 3 cut(s) 388, 1178, 1242
BplI GAGNNNNNCTC 2 cut(s) 986, 1018
BpmI CTGGAG 1 cut(s) 631
BpuEI CTTGAG 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 1183
BsaI GGTCTC 1 cut(s) 1032
BsaJI CCNNGG 2 cut(s) 34, 1097
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 902, 1022
Bse1I ACTGG 1 cut(s) 1016
Bse3DI GCAATG 1 cut(s) 322
BseBI CCWGG 1 cut(s) 1070
BseDI CCNNGG 2 cut(s) 34, 1097
BseGI GGATG 5 cut(s) 62, 577, 608, 958, 1027
BseLI CCNNNNNNNGG 3 cut(s) 35, 902, 1022
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 4 cut(s) 432, 918, 1017, 1344
BseNI ACTGG 1 cut(s) 1016
BseRI GAGGAG 3 cut(s) 477, 634, 784
BseSI GKGCMC 1 cut(s) 918
BseXI GCAGC 2 cut(s) 142, 749
BseYI CCCAGC 1 cut(s) 1047
BshFI GGCC 4 cut(s) 567, 621, 741, 1112
BshNI GGYRCC 1 cut(s) 922
BsiHKAI GWGCWC 1 cut(s) 999
BslFI GGGAC 4 cut(s) 11, 742, 800, 919
BslI CCNNNNNNNGG 3 cut(s) 35, 902, 1022
BsmAI GTCTC 2 cut(s) 82, 1032
BsmFI GGGAC 4 cut(s) 11, 742, 800, 919
BsmI GAATGC 1 cut(s) 1161
BsnI GGCC 4 cut(s) 567, 621, 741, 1112
Bso31I GGTCTC 1 cut(s) 1032
Bsp1286I GDGCHC 2 cut(s) 918, 999
Bsp1407I TGTACA 1 cut(s) 456
Bsp143I GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
Bsp19I CCATGG 1 cut(s) 34
BspANI GGCC 4 cut(s) 567, 621, 741, 1112
BspCNI CTCAG 4 cut(s) 431, 919, 1016, 1343
BspLI GGNNCC 4 cut(s) 40, 907, 924, 1111
BspPI GGATC 4 cut(s) 509, 1088, 1159, 1308
BspQI GCTCTTC 1 cut(s) 1266
BspT107I GGYRCC 1 cut(s) 922
BspTNI GGTCTC 1 cut(s) 1032
BsrDI GCAATG 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 456
BsrI ACTGG 1 cut(s) 1016
BssECI CCNNGG 2 cut(s) 34, 1097
BssMI GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
BssNI GRCGYC 1 cut(s) 1183
BssT1I CCWWGG 2 cut(s) 34, 1097
Bst2UI CCWGG 1 cut(s) 1070
Bst4CI ACNGT 3 cut(s) 514, 817, 1322
Bst6I CTCTTC 6 cut(s) 303, 381, 491, 672, 1068, 1266
BstACI GRCGYC 1 cut(s) 1183
BstAUI TGTACA 1 cut(s) 456
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 5 cut(s) 418, 927, 1003, 1103, 1330
BstDSI CCRYGG 1 cut(s) 34
BstF5I GGATG 5 cut(s) 62, 577, 608, 958, 1027
BstKTI GATC 5 cut(s) 504, 1084, 1096, 1154, 1303
BstMAI GTCTC 2 cut(s) 82, 1032
BstMBI GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
BstMWI GCNNNNNNNGC 4 cut(s) 321, 573, 1044, 1180
BstNI CCWGG 1 cut(s) 1070
BstSCI CCNGG 1 cut(s) 1068
BstSFI CTRYAG 2 cut(s) 162, 816
BstSLI GKGCMC 1 cut(s) 918
BstV1I GCAGC 2 cut(s) 142, 749
BstX2I RGATCY 3 cut(s) 1093, 1151, 1300
BstXI CCANNNNNNTGG 1 cut(s) 873
BstYI RGATCY 3 cut(s) 1093, 1151, 1300
BsuRI GGCC 4 cut(s) 567, 621, 741, 1112
BtgI CCRYGG 1 cut(s) 34
BtgZI GCGATG 1 cut(s) 1155
BtsCI GGATG 5 cut(s) 62, 577, 608, 958, 1027
BtsIMutI CAGTG 1 cut(s) 1023
Cac8I GCNNGC 1 cut(s) 280
Cfr13I GGNCC 2 cut(s) 906, 1110
CseI GACGC 1 cut(s) 1172
Csp6I GTAC 4 cut(s) 56, 147, 457, 931
CviAII CATG 9 cut(s) 35, 366, 569, 674, 941, 1179, 1192, 1277, 1343
CviQI GTAC 4 cut(s) 56, 147, 457, 931
DdeI CTNAG 5 cut(s) 418, 927, 1003, 1103, 1330
DpnI GATC 5 cut(s) 503, 1083, 1095, 1153, 1302
DpnII GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
DraIII CACNNNGTG 1 cut(s) 290
DriI GACNNNNNGTC 2 cut(s) 793, 1182
EaeI YGGCCR 1 cut(s) 565
Eam1104I CTCTTC 6 cut(s) 303, 381, 491, 672, 1068, 1266
Eam1105I GACNNNNNGTC 2 cut(s) 793, 1182
EarI CTCTTC 6 cut(s) 303, 381, 491, 672, 1068, 1266
Ecl136II GAGCTC 1 cut(s) 997
Eco130I CCWWGG 2 cut(s) 34, 1097
Eco147I AGGCCT 1 cut(s) 741
Eco24I GRGCYC 1 cut(s) 999
Eco31I GGTCTC 1 cut(s) 1032
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 1 cut(s) 906
Eco53kI GAGCTC 1 cut(s) 997
Eco57I CTGAAG 1 cut(s) 135
EcoICRI GAGCTC 1 cut(s) 997
EcoO109I RGGNCCY 2 cut(s) 906, 1110
EcoRII CCWGG 1 cut(s) 1068
EcoRV GATATC 1 cut(s) 837
EcoT14I CCWWGG 2 cut(s) 34, 1097
EcoT22I ATGCAT 1 cut(s) 942
EcoT38I GRGCYC 1 cut(s) 999
ErhI CCWWGG 2 cut(s) 34, 1097
FaeI CATG 9 cut(s) 38, 369, 572, 677, 944, 1182, 1195, 1280, 1346
FalI AAGNNNNNCTT 2 cut(s) 527, 559
FaqI GGGAC 4 cut(s) 11, 742, 800, 919
FatI CATG 9 cut(s) 34, 365, 568, 673, 940, 1178, 1191, 1276, 1342
FbaI TGATCA 1 cut(s) 1081
Fnu4HI GCNGC 2 cut(s) 156, 763
FokI GGATG 5 cut(s) 49, 564, 615, 965, 1034
FriOI GRGCYC 1 cut(s) 999
Fsp4HI GCNGC 2 cut(s) 156, 763
FspBI CTAG 2 cut(s) 140, 851
GluI GCNGC 2 cut(s) 156, 763
GsaI CCCAGC 1 cut(s) 1051
GsuI CTGGAG 1 cut(s) 631
HaeIII GGCC 4 cut(s) 567, 621, 741, 1112
HgaI GACGC 1 cut(s) 1172
Hin1I GRCGYC 1 cut(s) 1183
Hin1II CATG 9 cut(s) 38, 369, 572, 677, 944, 1182, 1195, 1280, 1346
HindIII AAGCTT 2 cut(s) 262, 1036
HinfI GANTC 2 cut(s) 877, 1346
HphI GGTGA 3 cut(s) 1022, 1238, 1329
Hpy166II GTNNAC 2 cut(s) 457, 798
Hpy188I TCNGA 3 cut(s) 397, 421, 841
Hpy188III TCNNGA 5 cut(s) 140, 328, 544, 648, 1304
Hpy8I GTNNAC 2 cut(s) 457, 798
HpyAV CCTTC 4 cut(s) 529, 896, 1217, 1336
HpyCH4III ACNGT 3 cut(s) 514, 817, 1322
HpyCH4V TGCA 7 cut(s) 4, 449, 609, 754, 940, 1148, 1161
HpyF10VI GCNNNNNNNGC 4 cut(s) 321, 573, 1044, 1180
HpyF3I CTNAG 5 cut(s) 418, 927, 1003, 1103, 1330
Hsp92I GRCGYC 1 cut(s) 1183
Hsp92II CATG 9 cut(s) 38, 369, 572, 677, 944, 1182, 1195, 1280, 1346
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
LguI GCTCTTC 1 cut(s) 1266
LmnI GCTCC 1 cut(s) 898
Lsp1109I GCAGC 2 cut(s) 142, 749
LweI GCATC 3 cut(s) 388, 1178, 1242
MaeI CTAG 2 cut(s) 140, 851
MaeIII GTNAC 3 cut(s) 514, 591, 1120
MalI GATC 5 cut(s) 503, 1083, 1095, 1153, 1302
MboI GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
MfeI CAATTG 2 cut(s) 888, 897
MflI RGATCY 3 cut(s) 1093, 1151, 1300
MhlI GDGCHC 2 cut(s) 918, 999
MlsI TGGCCA 1 cut(s) 567
MluCI AATT 8 cut(s) 82, 424, 486, 682, 888, 897, 945, 1217
MluNI TGGCCA 1 cut(s) 567
MlyI GAGTC 1 cut(s) 871
MmeI TCCRAC 2 cut(s) 412, 1185
Mox20I TGGCCA 1 cut(s) 567
Mph1103I ATGCAT 1 cut(s) 942
MroXI GAANNNNTTC 2 cut(s) 374, 539
MscI TGGCCA 1 cut(s) 567
MseI TTAA 3 cut(s) 81, 792, 1064
MslI CAYNNNNRTG 3 cut(s) 370, 582, 871
Msp20I TGGCCA 1 cut(s) 567
MspA1I CMGCKG 2 cut(s) 155, 1087
MspR9I CCNGG 1 cut(s) 1070
MunI CAATTG 2 cut(s) 888, 897
Mva1269I GAATGC 1 cut(s) 1161
MvaI CCWGG 1 cut(s) 1070
MwoI GCNNNNNNNGC 4 cut(s) 321, 573, 1044, 1180
NcoI CCATGG 1 cut(s) 34
NdeII GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
NlaIII CATG 9 cut(s) 38, 369, 572, 677, 944, 1182, 1195, 1280, 1346
NlaIV GGNNCC 4 cut(s) 40, 907, 924, 1111
NmuCI GTSAC 2 cut(s) 514, 591
NsiI ATGCAT 1 cut(s) 942
PceI AGGCCT 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 1266
PctI GAATGC 1 cut(s) 1161
PdmI GAANNNNTTC 2 cut(s) 374, 539
PfeI GAWTC 1 cut(s) 1346
PflMI CCANNNNNTGG 2 cut(s) 35, 1022
PkrI GCNGC 2 cut(s) 157, 764
PleI GAGTC 1 cut(s) 871
PpsI GAGTC 1 cut(s) 871
PpuMI RGGWCCY 1 cut(s) 906
Psp124BI GAGCTC 1 cut(s) 999
Psp5II RGGWCCY 1 cut(s) 906
Psp6I CCWGG 1 cut(s) 1068
PspFI CCCAGC 1 cut(s) 1047
PspGI CCWGG 1 cut(s) 1068
PspN4I GGNNCC 4 cut(s) 40, 907, 924, 1111
PspPI GGNCC 2 cut(s) 906, 1110
PspPPI RGGWCCY 1 cut(s) 906
PsuI RGATCY 3 cut(s) 1093, 1151, 1300
PvuII CAGCTG 2 cut(s) 155, 1087
RsaI GTAC 4 cut(s) 57, 148, 458, 932
RsaNI GTAC 4 cut(s) 56, 147, 457, 931
RseI CAYNNNNRTG 3 cut(s) 370, 582, 871
SacI GAGCTC 1 cut(s) 999
SapI GCTCTTC 1 cut(s) 1266
SaqAI TTAA 3 cut(s) 81, 792, 1064
SatI GCNGC 2 cut(s) 156, 763
Sau3AI GATC 5 cut(s) 501, 1081, 1093, 1151, 1300
Sau96I GGNCC 2 cut(s) 906, 1110
ScaI AGTACT 2 cut(s) 148, 932
SchI GAGTC 1 cut(s) 871
ScrFI CCNGG 1 cut(s) 1070
SduI GDGCHC 2 cut(s) 918, 999
SfaNI GCATC 3 cut(s) 388, 1178, 1242
SfcI CTRYAG 2 cut(s) 162, 816
SinI GGWCC 1 cut(s) 906
SmiMI CAYNNNNRTG 3 cut(s) 370, 582, 871
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
Sse9I AATT 8 cut(s) 82, 424, 486, 682, 888, 897, 945, 1217
SseBI AGGCCT 1 cut(s) 741
SspI AATATT 1 cut(s) 1062
SspMI CTAG 2 cut(s) 140, 851
SstI GAGCTC 1 cut(s) 999
StuI AGGCCT 1 cut(s) 741
StyD4I CCNGG 1 cut(s) 1068
StyI CCWWGG 2 cut(s) 34, 1097
TaaI ACNGT 3 cut(s) 514, 817, 1322
TaqI TCGA 1 cut(s) 1165
TasI AATT 8 cut(s) 82, 424, 486, 682, 888, 897, 945, 1217
TatI WGTACW 4 cut(s) 55, 146, 456, 930
TfiI GAWTC 1 cut(s) 1346
Tru1I TTAA 3 cut(s) 81, 792, 1064
Tru9I TTAA 3 cut(s) 81, 792, 1064
TscAI CASTG 1 cut(s) 1023
TseFI GTSAC 2 cut(s) 514, 591
TseI GCWGC 2 cut(s) 155, 762
Tsp45I GTSAC 2 cut(s) 514, 591
TspDTI ATGAA 4 cut(s) 224, 333, 537, 693
TspRI CASTG 1 cut(s) 1023
Van91I CCANNNNNTGG 2 cut(s) 35, 1022
VpaK11BI GGWCC 1 cut(s) 906
XapI RAATTY 2 cut(s) 424, 682
XbaI TCTAGA 1 cut(s) 139
XcmI CCANNNNNNNNNTGG 2 cut(s) 363, 696
XmnI GAANNNNTTC 2 cut(s) 374, 539
XspI CTAG 2 cut(s) 140, 851
ZrmI AGTACT 2 cut(s) 148, 932
Zsp2I ATGCAT 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.