Protein of unknown function (DUF 659)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17450 AT3G17450 |
| fragaria_vesca | FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 |
| malus_domestica | MD13G1139200.v1.1 MD16G1136600.v1.1 |
| prunus_persica | Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1 |
| pyrus_communis | pycom13g12110 pycom16g12020 pycom16g12030 pycom16g12040 |
| rosa_chinensis | RchiOBHm_Chr4g0427461 |
| rosa_laevigata | RLG00000007243 |
| rosa_roxburghii | Rroxscaffold_5G00369110 |
| rosa_rugosa | Rorug04G0208700 |
| rosa_samantha | Rh4AG274500 Rh4BG280200 Rh4CG295200 Rh4DG277700 |
| rosa_wichuraiana | Rw4G023780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1338 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 412 |
| AccI | GTMKAC | 3 cut(s) | 183, 1203, 2430 |
| AccII | CGCG | 1 cut(s) | 2007 |
| AciI | CCGC | 8 cut(s) | 105, 848, 895, 956, 1136, 1754, 2007, 2194 |
| AclWI | GGATC | 4 cut(s) | 2138, 2566, 2579, 2591 |
| AcoI | YGGCCR | 1 cut(s) | 997 |
| AdeI | CACNNNGTG | 1 cut(s) | 1394 |
| AfaI | GTAC | 5 cut(s) | 589, 775, 2128, 2273, 2324 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 31, 400, 412, 776 |
| AflII | CTTAAG | 1 cut(s) | 1421 |
| AgsI | TTSAA | 8 cut(s) | 121, 268, 760, 826, 1778, 2390, 2567, 2650 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1801 |
| AjnI | CCWGG | 3 cut(s) | 394, 511, 1106 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2434, 2466 |
| Alw21I | GWGCWC | 3 cut(s) | 1670, 1678, 2071 |
| Alw26I | GTCTC | 4 cut(s) | 592, 598, 849, 2386 |
| Alw44I | GTGCAC | 1 cut(s) | 2067 |
| AlwI | GGATC | 4 cut(s) | 2138, 2566, 2579, 2591 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1054, 1118, 2459 |
| Ama87I | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| AoxI | GGCC | 5 cut(s) | 736, 997, 1007, 1189, 1556 |
| ApaLI | GTGCAC | 1 cut(s) | 2067 |
| ApeKI | GCWGC | 8 cut(s) | 124, 1264, 1343, 1946, 2150, 2178, 2188, 2191 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2260, 2292 |
| AseI | ATTAAT | 2 cut(s) | 713, 1037 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1379, 2056, 2374, 2394 |
| AspA2I | CCTAGG | 1 cut(s) | 233 |
| AspLEI | GCGC | 3 cut(s) | 6, 1996, 2343 |
| AspS9I | GGNCC | 9 cut(s) | 34, 298, 403, 736, 764, 1007, 1190, 1609, 1756 |
| AsuC2I | CCSGG | 3 cut(s) | 26, 27, 1011 |
| AsuHPI | GGTGA | 8 cut(s) | 350, 451, 621, 734, 1390, 1805, 1877, 2654 |
| AvaI | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| AvaII | GGWCC | 6 cut(s) | 34, 298, 403, 764, 1609, 1756 |
| AvrII | CCTAGG | 1 cut(s) | 233 |
| AxyI | CCTNAGG | 1 cut(s) | 1680 |
| BaeGI | GKGCMC | 1 cut(s) | 2071 |
| BalI | TGGCCA | 1 cut(s) | 999 |
| BbsI | GAAGAC | 1 cut(s) | 663 |
| Bbv12I | GWGCWC | 3 cut(s) | 1670, 1678, 2071 |
| BbvI | GCAGC | 8 cut(s) | 136, 1251, 1330, 1958, 2137, 2165, 2175, 2203 |
| BccI | CCATC | 9 cut(s) | 24, 282, 328, 608, 713, 1082, 1282, 1910, 1972 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1985, 2019 |
| BciT130I | CCWGG | 3 cut(s) | 396, 513, 1108 |
| BclI | TGATCA | 4 cut(s) | 670, 1170, 1411, 2263 |
| BcnI | CCSGG | 3 cut(s) | 26, 27, 1011 |
| BcoDI | GTCTC | 4 cut(s) | 592, 598, 849, 2386 |
| BfaI | CTAG | 7 cut(s) | 234, 504, 809, 1148, 1332, 1581, 2550 |
| BfmI | CTRYAG | 3 cut(s) | 1492, 1819, 2189 |
| BfrI | CTTAAG | 1 cut(s) | 1421 |
| BisI | GCNGC | 9 cut(s) | 125, 957, 1265, 1344, 1947, 2151, 2179, 2189, 2192 |
| BlnI | CCTAGG | 1 cut(s) | 233 |
| BlsI | GCNGC | 9 cut(s) | 126, 958, 1266, 1345, 1948, 2152, 2180, 2190, 2193 |
| Bme1390I | CCNGG | 6 cut(s) | 26, 27, 396, 513, 1011, 1108 |
| Bme18I | GGWCC | 6 cut(s) | 34, 298, 403, 764, 1609, 1756 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1801 |
| BmeT110I | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| BmgT120I | GGNCC | 9 cut(s) | 34, 298, 403, 736, 764, 1007, 1190, 1609, 1756 |
| BmiI | GGNNCC | 7 cut(s) | 35, 171, 366, 404, 1758, 2037, 2533 |
| BmrFI | CCNGG | 6 cut(s) | 26, 27, 396, 513, 1011, 1108 |
| BmrI | ACTGGG | 2 cut(s) | 600, 1564 |
| BmuI | ACTGGG | 2 cut(s) | 600, 1564 |
| BpiI | GAAGAC | 1 cut(s) | 663 |
| BpmI | CTGGAG | 5 cut(s) | 165, 534, 1076, 1654, 2272 |
| Bpu10I | CCTNAGC | 2 cut(s) | 48, 417 |
| BpuEI | CTTGAG | 1 cut(s) | 1007 |
| BpuMI | CCSGG | 3 cut(s) | 26, 27, 1011 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2595 |
| BsaJI | CCNNGG | 8 cut(s) | 25, 37, 233, 394, 395, 406, 543, 1107 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 31, 400, 412, 776 |
| Bse1I | ACTGG | 5 cut(s) | 595, 781, 1123, 1570, 2255 |
| Bse21I | CCTNAGG | 1 cut(s) | 1680 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2595 |
| BseBI | CCWGG | 3 cut(s) | 396, 513, 1108 |
| BseDI | CCNNGG | 8 cut(s) | 25, 37, 233, 394, 395, 406, 543, 1107 |
| BseJI | GATNNNNATC | 1 cut(s) | 2595 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 31, 400, 412, 776 |
| BseNI | ACTGG | 5 cut(s) | 595, 781, 1123, 1570, 2255 |
| BseRI | GAGGAG | 4 cut(s) | 308, 357, 610, 1376 |
| BseSI | GKGCMC | 1 cut(s) | 2071 |
| BseXI | GCAGC | 8 cut(s) | 136, 1251, 1330, 1958, 2137, 2165, 2175, 2203 |
| BseYI | CCCAGC | 1 cut(s) | 1346 |
| Bsh1236I | CGCG | 1 cut(s) | 2007 |
| Bsh1285I | CGRYCG | 1 cut(s) | 803 |
| BshFI | GGCC | 5 cut(s) | 738, 999, 1009, 1191, 1558 |
| BsiEI | CGRYCG | 1 cut(s) | 803 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1670, 1678, 2071 |
| BsiHKCI | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| BsiSI | CCGG | 3 cut(s) | 26, 1010, 2147 |
| BslFI | GGGAC | 3 cut(s) | 47, 416, 1931 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 31, 400, 412, 776 |
| BsmAI | GTCTC | 4 cut(s) | 592, 598, 849, 2386 |
| BsmFI | GGGAC | 3 cut(s) | 47, 416, 1931 |
| BsmI | GAATGC | 3 cut(s) | 832, 1460, 2024 |
| BsnI | GGCC | 5 cut(s) | 738, 999, 1009, 1191, 1558 |
| BsoBI | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1670, 1678, 2071 |
| Bsp1407I | TGTACA | 1 cut(s) | 2271 |
| Bsp19I | CCATGG | 2 cut(s) | 37, 406 |
| BspACI | CCGC | 8 cut(s) | 105, 848, 895, 956, 1136, 1754, 2007, 2194 |
| BspANI | GGCC | 5 cut(s) | 738, 999, 1009, 1191, 1558 |
| BspFNI | CGCG | 1 cut(s) | 2007 |
| BspLI | GGNNCC | 7 cut(s) | 35, 171, 366, 404, 1758, 2037, 2533 |
| BspMAI | CTGCAG | 1 cut(s) | 2193 |
| BspPI | GGATC | 4 cut(s) | 2138, 2566, 2579, 2591 |
| BspQI | GCTCTTC | 1 cut(s) | 1460 |
| BspTI | CTTAAG | 1 cut(s) | 1421 |
| BsrGI | TGTACA | 1 cut(s) | 2271 |
| BsrI | ACTGG | 5 cut(s) | 595, 781, 1123, 1570, 2255 |
| BssECI | CCNNGG | 8 cut(s) | 25, 37, 233, 394, 395, 406, 543, 1107 |
| BssNAI | GTATAC | 2 cut(s) | 184, 1204 |
| BssT1I | CCWWGG | 3 cut(s) | 37, 233, 406 |
| Bst1107I | GTATAC | 2 cut(s) | 184, 1204 |
| Bst2UI | CCWGG | 3 cut(s) | 396, 513, 1108 |
| Bst4CI | ACNGT | 8 cut(s) | 86, 330, 1142, 1823, 1883, 2276, 2375, 2571 |
| Bst6I | CTCTTC | 4 cut(s) | 285, 1278, 1361, 1460 |
| BstAFI | CTTAAG | 1 cut(s) | 1421 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 453, 1844, 2075 |
| BstAUI | TGTACA | 1 cut(s) | 2271 |
| BstC8I | GCNNGC | 1 cut(s) | 2009 |
| BstDSI | CCRYGG | 2 cut(s) | 37, 406 |
| BstFNI | CGCG | 1 cut(s) | 2007 |
| BstHHI | GCGC | 3 cut(s) | 6, 1996, 2343 |
| BstMAI | GTCTC | 4 cut(s) | 592, 598, 849, 2386 |
| BstMCI | CGRYCG | 1 cut(s) | 803 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 453, 1109, 1844, 2075 |
| BstNI | CCWGG | 3 cut(s) | 396, 513, 1108 |
| BstNSI | RCATGY | 2 cut(s) | 1804, 2226 |
| BstSCI | CCNGG | 6 cut(s) | 24, 25, 394, 511, 1009, 1106 |
| BstSFI | CTRYAG | 3 cut(s) | 1492, 1819, 2189 |
| BstSLI | GKGCMC | 1 cut(s) | 2071 |
| BstUI | CGCG | 1 cut(s) | 2007 |
| BstV1I | GCAGC | 8 cut(s) | 136, 1251, 1330, 1958, 2137, 2165, 2175, 2203 |
| BstV2I | GAAGAC | 1 cut(s) | 663 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1619 |
| BstZ17I | GTATAC | 2 cut(s) | 184, 1204 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1680 |
| BsuRI | GGCC | 5 cut(s) | 738, 999, 1009, 1191, 1558 |
| BtgI | CCRYGG | 2 cut(s) | 37, 406 |
| BtsI | GCAGTG | 1 cut(s) | 1833 |
| BtsIMutI | CAGTG | 8 cut(s) | 1055, 1116, 1166, 1227, 1670, 1828, 1833, 2607 |
| Cac8I | GCNNGC | 1 cut(s) | 2009 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1054, 1118, 2459 |
| CfoI | GCGC | 3 cut(s) | 6, 1996, 2343 |
| Cfr13I | GGNCC | 9 cut(s) | 34, 298, 403, 736, 764, 1007, 1190, 1609, 1756 |
| Cfr9I | CCCGGG | 1 cut(s) | 25 |
| Csp6I | GTAC | 5 cut(s) | 588, 774, 2127, 2272, 2323 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 67, 102 |
| CviQI | GTAC | 5 cut(s) | 588, 774, 2127, 2272, 2323 |
| DraI | TTTAAA | 1 cut(s) | 490 |
| DraIII | CACNNNGTG | 1 cut(s) | 1394 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1801 |
| EaeI | YGGCCR | 1 cut(s) | 997 |
| Eam1104I | CTCTTC | 4 cut(s) | 285, 1278, 1361, 1460 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1801 |
| EarI | CTCTTC | 4 cut(s) | 285, 1278, 1361, 1460 |
| EciI | GGCGGA | 2 cut(s) | 120, 1151 |
| Eco130I | CCWWGG | 3 cut(s) | 37, 233, 406 |
| Eco147I | AGGCCT | 1 cut(s) | 1558 |
| Eco32I | GATATC | 1 cut(s) | 1976 |
| Eco47I | GGWCC | 6 cut(s) | 34, 298, 403, 764, 1609, 1756 |
| Eco81I | CCTNAGG | 1 cut(s) | 1680 |
| Eco88I | CYCGRG | 3 cut(s) | 25, 542, 1358 |
| EcoRI | GAATTC | 2 cut(s) | 507, 1747 |
| EcoRII | CCWGG | 3 cut(s) | 394, 511, 1106 |
| EcoRV | GATATC | 1 cut(s) | 1976 |
| EcoT14I | CCWWGG | 3 cut(s) | 37, 233, 406 |
| EcoT22I | ATGCAT | 3 cut(s) | 1460, 2024, 2500 |
| ErhI | CCWWGG | 3 cut(s) | 37, 233, 406 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 540, 572, 1514, 1546 |
| FaqI | GGGAC | 3 cut(s) | 47, 416, 1931 |
| FauI | CCCGC | 2 cut(s) | 902, 2000 |
| FauNDI | CATATG | 1 cut(s) | 2500 |
| FbaI | TGATCA | 4 cut(s) | 670, 1170, 1411, 2263 |
| FblI | GTMKAC | 3 cut(s) | 183, 1203, 2430 |
| Fnu4HI | GCNGC | 9 cut(s) | 125, 957, 1265, 1344, 1947, 2151, 2179, 2189, 2192 |
| Fsp4HI | GCNGC | 9 cut(s) | 125, 957, 1265, 1344, 1947, 2151, 2179, 2189, 2192 |
| FspBI | CTAG | 7 cut(s) | 234, 504, 809, 1148, 1332, 1581, 2550 |
| GlaI | GCGC | 3 cut(s) | 5, 1995, 2342 |
| GluI | GCNGC | 9 cut(s) | 125, 957, 1265, 1344, 1947, 2151, 2179, 2189, 2192 |
| GsaI | CCCAGC | 1 cut(s) | 1350 |
| GsuI | CTGGAG | 5 cut(s) | 165, 534, 1076, 1654, 2272 |
| HaeIII | GGCC | 5 cut(s) | 738, 999, 1009, 1191, 1558 |
| HapII | CCGG | 3 cut(s) | 26, 1010, 2147 |
| HhaI | GCGC | 3 cut(s) | 6, 1996, 2343 |
| Hin6I | GCGC | 3 cut(s) | 4, 1994, 2341 |
| HinP1I | GCGC | 3 cut(s) | 4, 1994, 2341 |
| HincII | GTYRAC | 2 cut(s) | 22, 391 |
| HindII | GTYRAC | 2 cut(s) | 22, 391 |
| HinfI | GANTC | 3 cut(s) | 680, 812, 1919 |
| HpaII | CCGG | 3 cut(s) | 26, 1010, 2147 |
| HphI | GGTGA | 8 cut(s) | 350, 451, 621, 734, 1390, 1805, 1877, 2654 |
| Hpy188I | TCNGA | 8 cut(s) | 244, 649, 784, 872, 1252, 1435, 1711, 2220 |
| HpyAV | CCTTC | 7 cut(s) | 203, 559, 1537, 1569, 2046, 2358, 2519 |
| HpyCH4III | ACNGT | 8 cut(s) | 86, 330, 1142, 1823, 1883, 2276, 2375, 2571 |
| HpyCH4IV | ACGT | 1 cut(s) | 2325 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 453, 1109, 1844, 2075 |
| HpySE526I | ACGT | 1 cut(s) | 2325 |
| HspAI | GCGC | 3 cut(s) | 4, 1994, 2341 |
| Ksp22I | TGATCA | 4 cut(s) | 670, 1170, 1411, 2263 |
| LguI | GCTCTTC | 1 cut(s) | 1460 |
| LmnI | GCTCC | 6 cut(s) | 11, 175, 370, 1673, 2035, 2404 |
| Lsp1109I | GCAGC | 8 cut(s) | 136, 1251, 1330, 1958, 2137, 2165, 2175, 2203 |
| MaeI | CTAG | 7 cut(s) | 234, 504, 809, 1148, 1332, 1581, 2550 |
| MaeII | ACGT | 1 cut(s) | 2325 |
| MaeIII | GTNAC | 6 cut(s) | 151, 1114, 1396, 1793, 2312, 2571 |
| MfeI | CAATTG | 3 cut(s) | 1218, 1402, 2538 |
| MhlI | GDGCHC | 3 cut(s) | 1670, 1678, 2071 |
| MlsI | TGGCCA | 1 cut(s) | 999 |
| MluNI | TGGCCA | 1 cut(s) | 999 |
| MlyI | GAGTC | 1 cut(s) | 1913 |
| MmeI | TCCRAC | 1 cut(s) | 2382 |
| Mox20I | TGGCCA | 1 cut(s) | 999 |
| Mph1103I | ATGCAT | 3 cut(s) | 1460, 2024, 2500 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1379, 2056, 2374, 2394 |
| MscI | TGGCCA | 1 cut(s) | 999 |
| MslI | CAYNNNNRTG | 4 cut(s) | 191, 1663, 1805, 2580 |
| Msp20I | TGGCCA | 1 cut(s) | 999 |
| MspA1I | CMGCKG | 1 cut(s) | 2194 |
| MspCI | CTTAAG | 1 cut(s) | 1421 |
| MspI | CCGG | 3 cut(s) | 26, 1010, 2147 |
| MspR9I | CCNGG | 6 cut(s) | 26, 27, 396, 513, 1011, 1108 |
| MunI | CAATTG | 3 cut(s) | 1218, 1402, 2538 |
| Mva1269I | GAATGC | 3 cut(s) | 832, 1460, 2024 |
| MvaI | CCWGG | 3 cut(s) | 396, 513, 1108 |
| MvnI | CGCG | 1 cut(s) | 2007 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 453, 1109, 1844, 2075 |
| NciI | CCSGG | 3 cut(s) | 26, 27, 1011 |
| NcoI | CCATGG | 2 cut(s) | 37, 406 |
| NdeI | CATATG | 1 cut(s) | 2500 |
| NlaIV | GGNNCC | 7 cut(s) | 35, 171, 366, 404, 1758, 2037, 2533 |
| NmuCI | GTSAC | 5 cut(s) | 151, 1114, 1396, 1793, 2312 |
| NsiI | ATGCAT | 3 cut(s) | 1460, 2024, 2500 |
| NspI | RCATGY | 2 cut(s) | 1804, 2226 |
| PaeR7I | CTCGAG | 1 cut(s) | 1358 |
| PasI | CCCWGGG | 1 cut(s) | 395 |
| PceI | AGGCCT | 1 cut(s) | 1558 |
| PciSI | GCTCTTC | 1 cut(s) | 1460 |
| PctI | GAATGC | 3 cut(s) | 832, 1460, 2024 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1379, 2056, 2374, 2394 |
| PfeI | GAWTC | 2 cut(s) | 680, 812 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 412 |
| PfoI | TCCNGGA | 1 cut(s) | 511 |
| PkrI | GCNGC | 9 cut(s) | 126, 958, 1266, 1345, 1948, 2152, 2180, 2190, 2193 |
| Ple19I | CGATCG | 1 cut(s) | 803 |
| PleI | GAGTC | 1 cut(s) | 1913 |
| PpsI | GAGTC | 1 cut(s) | 1913 |
| PshBI | ATTAAT | 2 cut(s) | 713, 1037 |
| PsiI | TTATAA | 1 cut(s) | 1338 |
| Psp6I | CCWGG | 3 cut(s) | 394, 511, 1106 |
| PspFI | CCCAGC | 1 cut(s) | 1346 |
| PspGI | CCWGG | 3 cut(s) | 394, 511, 1106 |
| PspN4I | GGNNCC | 7 cut(s) | 35, 171, 366, 404, 1758, 2037, 2533 |
| PspPI | GGNCC | 9 cut(s) | 34, 298, 403, 736, 764, 1007, 1190, 1609, 1756 |
| PspXI | VCTCGAGB | 1 cut(s) | 1358 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 953, 985 |
| PstI | CTGCAG | 1 cut(s) | 2193 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1054, 1118, 2459 |
| PvuI | CGATCG | 1 cut(s) | 803 |
| RsaI | GTAC | 5 cut(s) | 589, 775, 2128, 2273, 2324 |
| RsaNI | GTAC | 5 cut(s) | 588, 774, 2127, 2272, 2323 |
| RseI | CAYNNNNRTG | 4 cut(s) | 191, 1663, 1805, 2580 |
| SapI | GCTCTTC | 1 cut(s) | 1460 |
| SatI | GCNGC | 9 cut(s) | 125, 957, 1265, 1344, 1947, 2151, 2179, 2189, 2192 |
| Sau96I | GGNCC | 9 cut(s) | 34, 298, 403, 736, 764, 1007, 1190, 1609, 1756 |
| SchI | GAGTC | 1 cut(s) | 1913 |
| ScrFI | CCNGG | 6 cut(s) | 26, 27, 396, 513, 1011, 1108 |
| SduI | GDGCHC | 3 cut(s) | 1670, 1678, 2071 |
| SfcI | CTRYAG | 3 cut(s) | 1492, 1819, 2189 |
| Sfr274I | CTCGAG | 1 cut(s) | 1358 |
| SinI | GGWCC | 6 cut(s) | 34, 298, 403, 764, 1609, 1756 |
| SlaI | CTCGAG | 1 cut(s) | 1358 |
| SmaI | CCCGGG | 1 cut(s) | 27 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 191, 1663, 1805, 2580 |
| SmlI | CTYRAG | 3 cut(s) | 986, 1358, 1421 |
| SmoI | CTYRAG | 3 cut(s) | 986, 1358, 1421 |
| SseBI | AGGCCT | 1 cut(s) | 1558 |
| SsiI | CCGC | 8 cut(s) | 105, 848, 895, 956, 1136, 1754, 2007, 2194 |
| SspI | AATATT | 3 cut(s) | 1702, 2002, 2395 |
| SspMI | CTAG | 7 cut(s) | 234, 504, 809, 1148, 1332, 1581, 2550 |
| StuI | AGGCCT | 1 cut(s) | 1558 |
| StyD4I | CCNGG | 6 cut(s) | 24, 25, 394, 511, 1009, 1106 |
| StyI | CCWWGG | 3 cut(s) | 37, 233, 406 |
| TaaI | ACNGT | 8 cut(s) | 86, 330, 1142, 1823, 1883, 2276, 2375, 2571 |
| TaiI | ACGT | 1 cut(s) | 2328 |
| TaqI | TCGA | 7 cut(s) | 313, 803, 1269, 1359, 1639, 1978, 2309 |
| TatI | WGTACW | 3 cut(s) | 773, 2126, 2271 |
| TauI | GCSGC | 1 cut(s) | 959 |
| TfiI | GAWTC | 2 cut(s) | 680, 812 |
| TscAI | CASTG | 8 cut(s) | 1055, 1123, 1173, 1234, 1670, 1828, 1840, 2614 |
| TseFI | GTSAC | 5 cut(s) | 151, 1114, 1396, 1793, 2312 |
| TseI | GCWGC | 8 cut(s) | 124, 1264, 1343, 1946, 2150, 2178, 2188, 2191 |
| Tsp45I | GTSAC | 5 cut(s) | 151, 1114, 1396, 1793, 2312 |
| TspDTI | ATGAA | 7 cut(s) | 209, 303, 578, 590, 669, 1535, 1647 |
| TspGWI | ACGGA | 3 cut(s) | 777, 1795, 2571 |
| TspMI | CCCGGG | 1 cut(s) | 25 |
| TspRI | CASTG | 8 cut(s) | 1055, 1123, 1173, 1234, 1670, 1828, 1840, 2614 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 412 |
| Vha464I | CTTAAG | 1 cut(s) | 1421 |
| VneI | GTGCAC | 1 cut(s) | 2067 |
| VpaK11BI | GGWCC | 6 cut(s) | 34, 298, 403, 764, 1609, 1756 |
| VspI | ATTAAT | 2 cut(s) | 713, 1037 |
| XceI | RCATGY | 2 cut(s) | 1804, 2226 |
| XhoI | CTCGAG | 1 cut(s) | 1358 |
| XmaI | CCCGGG | 1 cut(s) | 25 |
| XmaJI | CCTAGG | 1 cut(s) | 233 |
| XmiI | GTMKAC | 3 cut(s) | 183, 1203, 2430 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1379, 2056, 2374, 2394 |
| XspI | CTAG | 7 cut(s) | 234, 504, 809, 1148, 1332, 1581, 2550 |
| Zsp2I | ATGCAT | 3 cut(s) | 1460, 2024, 2500 |