Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004891

Physical Location & Seq

Genomic Coordinates Reverse (-)

55450155 .. 55455227

Gene Structure 5073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG295200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGCGCTCCTCTGGACTTGTTGACCCAGGATGGGACCATGGCGTTGCTCAGGATGAGAGGAAGAAAAAGGTTAAATGCAATTACTGTGGAAAAATAGTTAGTGGTGGAATATACAGATTGAAGCAGCATTTAGCCCGACTTTCTGGAGAAGTGACATATTGTGATAAGGCTCCAGAGGATGTATACATAAGTATGAAAGCAAATATGGAAGGATGTCGTTCTAATAAAAGACCTAGGCAATCTGAAGATGTTGGGCAAGCATATTTGAATATCCATCCTAAGAATGATGAAGAGGAGGTCCATGTTGGTTATAGAAGCAAGGGAAAACAGTTGGTGCGTGACAGAAATGTAGTTGTGTCGTTGGCTCCTCTAAGATCATTAGGATATGTTGACCCTGGGTGGGACCATGGTCTGGCTCAGGATGAGAAAAAGAAAAAGGTGAAATGCAATTATTGTGAAAAAATAGTTAGTGGTGGTATTAACCGGTTTAAACAACATTTAGCTAGAATTCCTGGAGAAGTAGCACCTTGTAAACATGCACCCGAGGAAGTTTATCTTAGAATGAAGGAGAATATGAAATGGCATCGTACTGGGAGGAGACAGAGACAGCCTGATGGAACGGATTTCTCACCTATTGATATGCAGTCAGATAATGAAGACCAAGAGGATGACCAAGTGGACTCTGCTCTGCATCACATAAGCACAGAAAGATTAATGGATGGTGATAGACGATTGGGCCAAAATTTTAGAAAGACTTTCAACGGACCTCCCTGTACTGGTTCTGAGCCATTATACAAACGATCAAGGCTAGATTCCCTTTTCTTGACTGCACCTAAGAATTTGTCACCTCAATATAGACAAGCAAAGGTCAGAACAATTGCAAACAGAATATCCCGCAAGGAAGTTACTTCTGGAATTTGCAAATTCTTTTACCATGCAGGAGTTCCTCTACAAGCGGCAAACTCCATATACTTCCATAAGATGCTTGAATTGGTTGGCCAATATGGGCCAGGTGTGGTAGCACCTACAAGCCAATTAATATCAGGTCGGTGTCTGCAGGAAGAAATTGCAACCATCAAAAACTACCTTGCTGAGTATAAGGCATCCTGGGCAATCACTGGTTGTTCTATAATGGCAGACACTTGGCTAGACACAGAGGGTAGAACACTGATCAATTTTTTAGCTTCTGGCCCAAATGGTGTATACTTTGTTTCTTCAGTTGATGCCACTGAAATAGTTAAAGATGCTTCAGAATTGTTTGAGCTGCTCGACAAAGTGGTTGAAGAGATGGGAGAGGAAAATGTAGTTCAGGTAATCATTCCAAATACTCCTAGTTATAAAGCTGCTGGGAAGATGCTTGAGGAGAAGAGAAAGAATTTGTTCTGGACTCCATGTGCCACCAATTGTATTGATCAAATTCTTAAACATTTATCAGACATACCTAGTGTAGCAGAGTGCATTAAGAAGAGCCAAAAGATTACAAAGCTCATCTACAGCCAAATTTGGTTGTTAAATTTTATGAAGAATGGCTTTACTCAGGGGAAGGAACTTTTGAGGCCTTCTATTACCCAGTTTGCCTCTAGCTTTGCTACCTTACAAAGCTTGGTGGACCATAGGATTGGTCTTAGAAAAATGTTTCGATCAAACAAATGGATTTCATCTCAGTGTTCCAGAGCACGTGAGGGGAAAGAGGTGGCAAATATTGTATCAGATGCAGGATTTTGGAAGAATTTACAGGTCGTTAGGAATTCTGTGGACCCAATGATGCAAGTTCTTCAAAAGGTTGAGAGTGGTGACTGCCTGTCAGTGTCGTCTATCTACAATGATATGTTCACTGCAAGTCTTGCAATCAAATCCATTTATGGTGAACATGAGCCTAATTGTGAACCAATTTGGGATGCCATCCAAAATCATTGGGACTCGTTAAATCACCCTGTATTTGTGGCAGCTTACTTCTTAAATCCATCTCACAGATATCGACCTGATTTTATGGCGCATAATATTCGTGGACTTACTGAATGCATTACTCGTCTGGAGCCAGACAATGCAAGAAGGATTTCTGCTTGTGCACAGGTAATAATTTTTTCATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

697

Amino Acids

78.96

Weight (kDa)

8.82

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-BED	PF02892	11 - 46	2.2e-06	BED zinc finger
zf-BED	PF02892	134 - 169	1.5e-07	BED zinc finger
DUF659	PF04937	342 - 493	1.8e-57	Domain of unknown function (DUF659)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17450 AT3G17450
fragaria_vesca	FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491
malus_domestica	MD13G1139200.v1.1 MD16G1136600.v1.1
prunus_persica	Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1
pyrus_communis	pycom13g12110 pycom16g12020 pycom16g12030 pycom16g12040
rosa_chinensis	RchiOBHm_Chr4g0427461
rosa_laevigata	RLG00000007243
rosa_roxburghii	Rroxscaffold_5G00369110
rosa_rugosa	Rorug04G0208700
rosa_samantha	Rh4AG274500 Rh4BG280200 Rh4CG295200 Rh4DG277700
rosa_wichuraiana	Rw4G023780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1338
AccB7I	CCANNNNNTGG	1 cut(s)	412
AccI	GTMKAC	2 cut(s)	183, 1203
AciI	CCGC	2 cut(s)	895, 956
AcoI	YGGCCR	1 cut(s)	997
AcuI	CTGAAG	3 cut(s)	264, 1200, 1233
AcvI	CACGTG	1 cut(s)	1679
AfaI	GTAC	2 cut(s)	589, 775
AfiI	CCNNNNNNNGG	4 cut(s)	31, 400, 412, 776
AgeI	ACCGGT	1 cut(s)	483
AgsI	TTSAA	6 cut(s)	121, 268, 760, 989, 1283, 1778
AhdI	GACNNNNNGTC	1 cut(s)	1801
AjnI	CCWGG	5 cut(s)	25, 394, 511, 1009, 1106
AluBI	AGCT	8 cut(s)	503, 1184, 1264, 1343, 1486, 1584, 1602, 1949
AluI	AGCT	8 cut(s)	503, 1184, 1264, 1343, 1486, 1584, 1602, 1949
Alw21I	GWGCWC	2 cut(s)	1678, 2071
Alw26I	GTCTC	2 cut(s)	592, 598
Alw44I	GTGCAC	1 cut(s)	2067
Ama87I	CYCGRG	1 cut(s)	542
AoxI	GGCC	5 cut(s)	736, 997, 1007, 1189, 1556
ApaLI	GTGCAC	1 cut(s)	2067
ApeKI	GCWGC	4 cut(s)	124, 1264, 1343, 1946
AseI	ATTAAT	2 cut(s)	713, 1037
AsiGI	ACCGGT	1 cut(s)	483
Asp700I	GAANNNNTTC	2 cut(s)	1379, 2056
AspA2I	CCTAGG	1 cut(s)	233
AspLEI	GCGC	2 cut(s)	6, 1996
AspS9I	GGNCC	9 cut(s)	34, 298, 403, 736, 764, 1007, 1190, 1609, 1756
AsuHPI	GGTGA	7 cut(s)	451, 621, 734, 837, 1805, 1877, 1922
AvaI	CYCGRG	1 cut(s)	542
AvaII	GGWCC	6 cut(s)	34, 298, 403, 764, 1609, 1756
AvrII	CCTAGG	1 cut(s)	233
BaeGI	GKGCMC	1 cut(s)	2071
BalI	TGGCCA	1 cut(s)	999
BbrPI	CACGTG	1 cut(s)	1679
BbsI	GAAGAC	1 cut(s)	663
Bbv12I	GWGCWC	2 cut(s)	1678, 2071
BbvI	GCAGC	4 cut(s)	136, 1251, 1330, 1958
BccI	CCATC	8 cut(s)	24, 282, 608, 713, 1082, 1282, 1910, 1972
BcgI	CGANNNNNNTGC	2 cut(s)	1985, 2019
BciT130I	CCWGG	5 cut(s)	27, 396, 513, 1011, 1108
BclI	TGATCA	2 cut(s)	1170, 1411
BcoDI	GTCTC	2 cut(s)	592, 598
BfaI	CTAG	7 cut(s)	234, 504, 809, 1148, 1332, 1443, 1581
BfmI	CTRYAG	2 cut(s)	1055, 1492
BisI	GCNGC	5 cut(s)	125, 957, 1265, 1344, 1947
BlnI	CCTAGG	1 cut(s)	233
BlsI	GCNGC	5 cut(s)	126, 958, 1266, 1345, 1948
Bme1390I	CCNGG	5 cut(s)	27, 396, 513, 1011, 1108
Bme18I	GGWCC	6 cut(s)	34, 298, 403, 764, 1609, 1756
BmeRI	GACNNNNNGTC	1 cut(s)	1801
BmeT110I	CYCGRG	1 cut(s)	542
BmgT120I	GGNCC	9 cut(s)	34, 298, 403, 736, 764, 1007, 1190, 1609, 1756
BmiI	GGNNCC	6 cut(s)	35, 171, 366, 404, 1758, 2037
BmrFI	CCNGG	5 cut(s)	27, 396, 513, 1011, 1108
BmrI	ACTGGG	2 cut(s)	600, 1564
BmuI	ACTGGG	2 cut(s)	600, 1564
BoxI	GACNNNNGTC	1 cut(s)	408
BpiI	GAAGAC	1 cut(s)	663
BpmI	CTGGAG	4 cut(s)	156, 165, 534, 2054
Bpu10I	CCTNAGC	2 cut(s)	48, 417
BpuEI	CTTGAG	1 cut(s)	1379
BsaAI	YACGTR	1 cut(s)	1679
BsaJI	CCNNGG	8 cut(s)	25, 37, 233, 394, 395, 406, 543, 1107
BsaWI	WCCGGW	1 cut(s)	483
Bsc4I	CCNNNNNNNGG	4 cut(s)	31, 400, 412, 776
Bse118I	RCCGGY	1 cut(s)	483
Bse1I	ACTGG	4 cut(s)	595, 781, 1123, 1570
BseBI	CCWGG	5 cut(s)	27, 396, 513, 1011, 1108
BseDI	CCNNGG	8 cut(s)	25, 37, 233, 394, 395, 406, 543, 1107
BseLI	CCNNNNNNNGG	4 cut(s)	31, 400, 412, 776
BseMII	CTCAG	6 cut(s)	62, 431, 774, 1083, 1550, 1676
BseNI	ACTGG	4 cut(s)	595, 781, 1123, 1570
BseRI	GAGGAG	4 cut(s)	308, 357, 610, 1376
BseSI	GKGCMC	1 cut(s)	2071
BseXI	GCAGC	4 cut(s)	136, 1251, 1330, 1958
BseYI	CCCAGC	1 cut(s)	1346
BsgI	GTGCAG	1 cut(s)	813
BshFI	GGCC	5 cut(s)	738, 999, 1009, 1191, 1558
BshTI	ACCGGT	1 cut(s)	483
BsiHKAI	GWGCWC	2 cut(s)	1678, 2071
BsiHKCI	CYCGRG	1 cut(s)	542
BsiSI	CCGG	1 cut(s)	484
BslFI	GGGAC	3 cut(s)	47, 416, 1931
BslI	CCNNNNNNNGG	4 cut(s)	31, 400, 412, 776
BsmAI	GTCTC	2 cut(s)	592, 598
BsmFI	GGGAC	3 cut(s)	47, 416, 1931
BsmI	GAATGC	1 cut(s)	2024
BsnI	GGCC	5 cut(s)	738, 999, 1009, 1191, 1558
BsoBI	CYCGRG	1 cut(s)	542
Bsp1286I	GDGCHC	2 cut(s)	1678, 2071
Bsp143I	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
Bsp19I	CCATGG	2 cut(s)	37, 406
BspACI	CCGC	2 cut(s)	895, 956
BspANI	GGCC	5 cut(s)	738, 999, 1009, 1191, 1558
BspCNI	CTCAG	6 cut(s)	61, 430, 775, 1084, 1549, 1675
BspLI	GGNNCC	6 cut(s)	35, 171, 366, 404, 1758, 2037
BspMAI	CTGCAG	1 cut(s)	1059
BspQI	GCTCTTC	1 cut(s)	1460
BsrFI	RCCGGY	1 cut(s)	483
BsrI	ACTGG	4 cut(s)	595, 781, 1123, 1570
BssAI	RCCGGY	1 cut(s)	483
BssECI	CCNNGG	8 cut(s)	25, 37, 233, 394, 395, 406, 543, 1107
BssMI	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
BssNAI	GTATAC	2 cut(s)	184, 1204
BssT1I	CCWWGG	3 cut(s)	37, 233, 406
Bst1107I	GTATAC	2 cut(s)	184, 1204
Bst2UI	CCWGG	5 cut(s)	27, 396, 513, 1011, 1108
Bst4CI	ACNGT	2 cut(s)	86, 330
Bst6I	CTCTTC	4 cut(s)	285, 1278, 1361, 1460
BstAPI	GCANNNNNTGC	1 cut(s)	1844
BstBAI	YACGTR	1 cut(s)	1679
BstC8I	GCNNGC	1 cut(s)	258
BstDSI	CCRYGG	2 cut(s)	37, 406
BstHHI	GCGC	2 cut(s)	6, 1996
BstKTI	GATC	5 cut(s)	377, 803, 1173, 1414, 1643
BstMAI	GTCTC	2 cut(s)	592, 598
BstMBI	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
BstMWI	GCNNNNNNNGC	2 cut(s)	1109, 1844
BstNI	CCWGG	5 cut(s)	27, 396, 513, 1011, 1108
BstNSI	RCATGY	1 cut(s)	539
BstPAI	GACNNNNGTC	1 cut(s)	408
BstSCI	CCNGG	5 cut(s)	25, 394, 511, 1009, 1106
BstSFI	CTRYAG	2 cut(s)	1055, 1492
BstSLI	GKGCMC	1 cut(s)	2071
BstV1I	GCAGC	4 cut(s)	136, 1251, 1330, 1958
BstV2I	GAAGAC	1 cut(s)	663
BstXI	CCANNNNNNTGG	1 cut(s)	1619
BstZ17I	GTATAC	2 cut(s)	184, 1204
BsuRI	GGCC	5 cut(s)	738, 999, 1009, 1191, 1558
BtgI	CCRYGG	2 cut(s)	37, 406
BtsI	GCAGTG	1 cut(s)	1833
BtsIMutI	CAGTG	6 cut(s)	1116, 1166, 1227, 1670, 1812, 1833
Cac8I	GCNNGC	1 cut(s)	258
CfoI	GCGC	2 cut(s)	6, 1996
Cfr10I	RCCGGY	1 cut(s)	483
Cfr13I	GGNCC	9 cut(s)	34, 298, 403, 736, 764, 1007, 1190, 1609, 1756
Csp6I	GTAC	2 cut(s)	588, 774
CspAI	ACCGGT	1 cut(s)	483
CspCI	CAANNNNNGTGG	2 cut(s)	67, 102
CviAII	CATG	7 cut(s)	38, 302, 407, 536, 935, 1392, 1871
CviQI	GTAC	2 cut(s)	588, 774
DpnI	GATC	5 cut(s)	376, 802, 1172, 1413, 1642
DpnII	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
DraI	TTTAAA	1 cut(s)	490
DriI	GACNNNNNGTC	1 cut(s)	1801
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	4 cut(s)	285, 1278, 1361, 1460
Eam1105I	GACNNNNNGTC	1 cut(s)	1801
EarI	CTCTTC	4 cut(s)	285, 1278, 1361, 1460
Eco130I	CCWWGG	3 cut(s)	37, 233, 406
Eco147I	AGGCCT	1 cut(s)	1558
Eco32I	GATATC	1 cut(s)	1976
Eco47I	GGWCC	6 cut(s)	34, 298, 403, 764, 1609, 1756
Eco57I	CTGAAG	3 cut(s)	264, 1200, 1233
Eco72I	CACGTG	1 cut(s)	1679
Eco88I	CYCGRG	1 cut(s)	542
EcoRI	GAATTC	2 cut(s)	507, 1747
EcoRII	CCWGG	5 cut(s)	25, 394, 511, 1009, 1106
EcoRV	GATATC	1 cut(s)	1976
EcoT14I	CCWWGG	3 cut(s)	37, 233, 406
EcoT22I	ATGCAT	1 cut(s)	2024
ErhI	CCWWGG	3 cut(s)	37, 233, 406
FaeI	CATG	7 cut(s)	41, 305, 410, 539, 938, 1395, 1874
FalI	AAGNNNNNCTT	4 cut(s)	540, 572, 1514, 1546
FaqI	GGGAC	3 cut(s)	47, 416, 1931
FatI	CATG	7 cut(s)	37, 301, 406, 535, 934, 1391, 1870
FauI	CCCGC	1 cut(s)	902
FbaI	TGATCA	2 cut(s)	1170, 1411
FblI	GTMKAC	2 cut(s)	183, 1203
Fnu4HI	GCNGC	5 cut(s)	125, 957, 1265, 1344, 1947
Fsp4HI	GCNGC	5 cut(s)	125, 957, 1265, 1344, 1947
FspBI	CTAG	7 cut(s)	234, 504, 809, 1148, 1332, 1443, 1581
GlaI	GCGC	2 cut(s)	5, 1995
GluI	GCNGC	5 cut(s)	125, 957, 1265, 1344, 1947
GsaI	CCCAGC	1 cut(s)	1350
GsuI	CTGGAG	4 cut(s)	156, 165, 534, 2054
HaeIII	GGCC	5 cut(s)	738, 999, 1009, 1191, 1558
HapII	CCGG	1 cut(s)	484
HhaI	GCGC	2 cut(s)	6, 1996
Hin1II	CATG	7 cut(s)	41, 305, 410, 539, 938, 1395, 1874
Hin6I	GCGC	2 cut(s)	4, 1994
HinP1I	GCGC	2 cut(s)	4, 1994
HincII	GTYRAC	2 cut(s)	22, 391
HindII	GTYRAC	2 cut(s)	22, 391
HindIII	AAGCTT	1 cut(s)	1600
HinfI	GANTC	4 cut(s)	680, 812, 1387, 1919
HpaII	CCGG	1 cut(s)	484
HphI	GGTGA	7 cut(s)	451, 621, 734, 837, 1805, 1877, 1922
Hpy188I	TCNGA	8 cut(s)	244, 649, 784, 872, 1252, 1435, 1711, 2093
HpyAV	CCTTC	5 cut(s)	203, 559, 1537, 1569, 2046
HpyCH4III	ACNGT	2 cut(s)	86, 330
HpyCH4IV	ACGT	1 cut(s)	1678
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1109, 1844
HpySE526I	ACGT	1 cut(s)	1678
Hsp92II	CATG	7 cut(s)	41, 305, 410, 539, 938, 1395, 1874
HspAI	GCGC	2 cut(s)	4, 1994
Ksp22I	TGATCA	2 cut(s)	1170, 1411
Kzo9I	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
LguI	GCTCTTC	1 cut(s)	1460
LmnI	GCTCC	4 cut(s)	11, 175, 370, 2035
Lsp1109I	GCAGC	4 cut(s)	136, 1251, 1330, 1958
MaeI	CTAG	7 cut(s)	234, 504, 809, 1148, 1332, 1443, 1581
MaeII	ACGT	1 cut(s)	1678
MaeIII	GTNAC	5 cut(s)	151, 338, 843, 904, 1793
MalI	GATC	5 cut(s)	376, 802, 1172, 1413, 1642
MboI	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
MfeI	CAATTG	2 cut(s)	876, 1402
MhlI	GDGCHC	2 cut(s)	1678, 2071
MlsI	TGGCCA	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	999
MlyI	GAGTC	3 cut(s)	674, 1381, 1913
Mox20I	TGGCCA	1 cut(s)	999
Mph1103I	ATGCAT	1 cut(s)	2024
MroXI	GAANNNNTTC	2 cut(s)	1379, 2056
MscI	TGGCCA	1 cut(s)	999
MslI	CAYNNNNRTG	2 cut(s)	191, 1663
Msp20I	TGGCCA	1 cut(s)	999
MspI	CCGG	1 cut(s)	484
MspR9I	CCNGG	5 cut(s)	27, 396, 513, 1011, 1108
MssI	GTTTAAAC	1 cut(s)	490
MunI	CAATTG	2 cut(s)	876, 1402
Mva1269I	GAATGC	1 cut(s)	2024
MvaI	CCWGG	5 cut(s)	27, 396, 513, 1011, 1108
MwoI	GCNNNNNNNGC	2 cut(s)	1109, 1844
NcoI	CCATGG	2 cut(s)	37, 406
NdeII	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
NlaIII	CATG	7 cut(s)	41, 305, 410, 539, 938, 1395, 1874
NlaIV	GGNNCC	6 cut(s)	35, 171, 366, 404, 1758, 2037
NmuCI	GTSAC	4 cut(s)	151, 338, 843, 1793
NsiI	ATGCAT	1 cut(s)	2024
NspI	RCATGY	1 cut(s)	539
PasI	CCCWGGG	1 cut(s)	395
PceI	AGGCCT	1 cut(s)	1558
PciSI	GCTCTTC	1 cut(s)	1460
PctI	GAATGC	1 cut(s)	2024
PdmI	GAANNNNTTC	2 cut(s)	1379, 2056
PfeI	GAWTC	1 cut(s)	812
PflMI	CCANNNNNTGG	1 cut(s)	412
PfoI	TCCNGGA	1 cut(s)	511
PinAI	ACCGGT	1 cut(s)	483
PkrI	GCNGC	5 cut(s)	126, 958, 1266, 1345, 1948
PleI	GAGTC	3 cut(s)	674, 1381, 1913
PmaCI	CACGTG	1 cut(s)	1679
PmeI	GTTTAAAC	1 cut(s)	490
PmlI	CACGTG	1 cut(s)	1679
PpsI	GAGTC	3 cut(s)	674, 1381, 1913
Ppu21I	YACGTR	1 cut(s)	1679
PshAI	GACNNNNGTC	1 cut(s)	408
PshBI	ATTAAT	2 cut(s)	713, 1037
PsiI	TTATAA	1 cut(s)	1338
Psp6I	CCWGG	5 cut(s)	25, 394, 511, 1009, 1106
PspCI	CACGTG	1 cut(s)	1679
PspFI	CCCAGC	1 cut(s)	1346
PspGI	CCWGG	5 cut(s)	25, 394, 511, 1009, 1106
PspN4I	GGNNCC	6 cut(s)	35, 171, 366, 404, 1758, 2037
PspPI	GGNCC	9 cut(s)	34, 298, 403, 736, 764, 1007, 1190, 1609, 1756
PstI	CTGCAG	1 cut(s)	1059
RsaI	GTAC	2 cut(s)	589, 775
RsaNI	GTAC	2 cut(s)	588, 774
RseI	CAYNNNNRTG	2 cut(s)	191, 1663
SapI	GCTCTTC	1 cut(s)	1460
SatI	GCNGC	5 cut(s)	125, 957, 1265, 1344, 1947
Sau3AI	GATC	5 cut(s)	374, 800, 1170, 1411, 1640
Sau96I	GGNCC	9 cut(s)	34, 298, 403, 736, 764, 1007, 1190, 1609, 1756
SchI	GAGTC	3 cut(s)	674, 1381, 1913
ScrFI	CCNGG	5 cut(s)	27, 396, 513, 1011, 1108
SduI	GDGCHC	2 cut(s)	1678, 2071
SfcI	CTRYAG	2 cut(s)	1055, 1492
SinI	GGWCC	6 cut(s)	34, 298, 403, 764, 1609, 1756
SmiMI	CAYNNNNRTG	2 cut(s)	191, 1663
SmlI	CTYRAG	1 cut(s)	1358
SmoI	CTYRAG	1 cut(s)	1358
SseBI	AGGCCT	1 cut(s)	1558
SsiI	CCGC	2 cut(s)	895, 956
SspI	AATATT	2 cut(s)	1702, 2002
SspMI	CTAG	7 cut(s)	234, 504, 809, 1148, 1332, 1443, 1581
StuI	AGGCCT	1 cut(s)	1558
StyD4I	CCNGG	5 cut(s)	25, 394, 511, 1009, 1106
StyI	CCWWGG	3 cut(s)	37, 233, 406
TaaI	ACNGT	2 cut(s)	86, 330
TaiI	ACGT	1 cut(s)	1681
TaqI	TCGA	3 cut(s)	1269, 1639, 1978
TatI	WGTACW	1 cut(s)	773
TauI	GCSGC	1 cut(s)	959
TfiI	GAWTC	1 cut(s)	812
TscAI	CASTG	6 cut(s)	1123, 1173, 1234, 1670, 1812, 1840
TseFI	GTSAC	4 cut(s)	151, 338, 843, 1793
TseI	GCWGC	4 cut(s)	124, 1264, 1343, 1946
Tsp45I	GTSAC	4 cut(s)	151, 338, 843, 1793
TspDTI	ATGAA	8 cut(s)	209, 303, 578, 590, 669, 1535, 1647, 2076
TspGWI	ACGGA	2 cut(s)	635, 777
TspRI	CASTG	6 cut(s)	1123, 1173, 1234, 1670, 1812, 1840
Van91I	CCANNNNNTGG	1 cut(s)	412
VneI	GTGCAC	1 cut(s)	2067
VpaK11BI	GGWCC	6 cut(s)	34, 298, 403, 764, 1609, 1756
VspI	ATTAAT	2 cut(s)	713, 1037
XceI	RCATGY	1 cut(s)	539
XmaJI	CCTAGG	1 cut(s)	233
XmiI	GTMKAC	2 cut(s)	183, 1203
XmnI	GAANNNNTTC	2 cut(s)	1379, 2056
XspI	CTAG	7 cut(s)	234, 504, 809, 1148, 1332, 1443, 1581
Zsp2I	ATGCAT	1 cut(s)	2024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.