Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004891

Physical Location & Seq

Genomic Coordinates Forward (+)

8481054 .. 8485860

Gene Structure 4807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G105600.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGCCATTCGTTTTTTCTAACCCAGATTCCTATTTCCTGTTGCCTAACTCTCACTGTGCCACAATGCGCTCCTCTGGACTTGTTGACCCTGGATGGGAACATGGCATGGCTCAAGATGAGAGGAAGAAAAAGGTTAAATGCAATTACTGTGGAAAAATAGTTAGTGGAGGAATATATAGATTGAAGCAACATTTAGCCCGAGTTTCTGGAGAAGTTACTTATTGTGATAAGGCTCCAGAGGATGTGTACATGAGTATGAAAGCAAATATGGAAGGAAGTCGTTCTAATAAGAAACCTAGGCATTCTGAAGATATTGGGCAGGCATATTTGAATTTCCAATCTAATGATGATGAAGAAGAGGTGCATGTTGGTTATAGAAGCAAAGGAAAGCAATTGATGGGTGACAGGAATTTAGCTATGAAGTTAACTCCTCTTCGGTCATTAGGATATGTTGACCCTGGGTGGGAACATGGTGTTGCTCAGGATGAGAAAAAGAAAAAGGTGAAATGCATTTATTGCGAGAAAATAGTTAGTGGTGGTATCAATCGGTTTAAACAACATTTAGCTAGAATTCCTGGAGAAGTAGCACCTTGTAAACATGCTCCTGAGGAAGTTTTTCTTAAAATAAAAGAGAATATGAAATGGCATCGTACTGGAAGGAGGCAGAGACAAGCCGATTCAAAGGACATGTCACCTTTTGATCTGCAGTCAGACAATGAAGATCAAGACGATGACCAAATGGAAGCTGCTCTGCATCATATAAACAAGGAAAGATTGATTGATGGTGATAGGAGATTGGGCCAAAATTTGAGAAATACATTCAAGGCATTGCCTCCCAGTACTGGTTCTGAACCATTATTTAAAAGATCAAGGCTAGATTCCCTTTTCTTGACTGCTCCCAAGAGTTTGACACCACATTCTTACAGACAAGTAAGGGTCAGAACAATGTCAAATAAAATATCCCGCAAGGAAGTTATTTCTGGAATTTGCAAATTCTTTTACCATGCAGGAGTTCCTCTACAAGCAGCAAACTCCGTATACTTCCATAAGATGCTGGAATTGGTTGGCCAATATGGCCAGGGTTTGGTAGCACCTCCAAGTCAATTAATATCTGGTCGGTTTCTGCAAGAGGAACTTGCAACCATTAAAACCTACCTGGCTGATTATAAGGCGTCCTGGGCAATCACTGGGTGTTCTATAATGGCAGACAGTTGGAGAGACACTGAGGGTAGGATATTAATAAATTTCTTGGCTTCTGGCCCAAATGGTGTATACTTTGTTTCTTCAGTTGATGCCACTGAAATAGTTGAAGATGCTTCGAATTTGTTTAAGCTGCTGGACAAAGTGGTTGAAGAGATGGGTGAGGAAAATGTAGTTCAGGTAATCACTCCAATTACTCCTAGCTATAAAGCTGCTGGAAATATGCTTGAAGAGAAAAGAAAGAAATTATTCTGGACCCCATGTGCCACCAGTTGTATTGATCAAATGCTTGAAGATTTTTTGAAGATAAGATGTGTAGCGGAGTGCATGGAGAAGGGGCAAAAAATTACGAAGCTCATTTACAACCAAATTTGGTTGTTAAATTTTCTGAAGAGTGATTTTACTCAGGGGAAGGAACTTTTGAGACCGTCTATTACCCGGTTCGCCTCTAGCTTTGCTACCTTACAAAGCTTGCTGGACCACCGGACTGGTCTTAGAAGAATGTTTCAATCAAACAAATGGATTTCATCTCAGTGCTCCAAATCATGTGAAGGAAAAGAGGTGGAAAGTATTGTATTAAATGCTACCTTCTGGAAGAAGCTACAGTTTGTTAGGAATTCAGTGGACCCAATTATGCAAGTTCTTCAAAAGGTTGAGAGTGGCGACTGCTTGTCAATGTCATCTATATATAATGACATGTACAGGGCAAAGATTGCAATCAAAACCATTCATGGCGACAATGTACGTAAATATGAACCATTTTGGAGTGTTATAGAAAGTCATTGGAACTCATTGTTCTACCACCCGGTATATGTAGCTGCTTACTACTTAAATCCATCATACAGATATCGACCTGATTTTACGGCGCATACCGAGGCGATGCGTGGACTTAATGAGTGCATCGTTCGGCTGGAGCCAGACAGTGCAAGAAGGATTTCTGCATCTATGCAGATTTCTGATTACAACTCTGCTAAAGCTGATTTTGGAACCGAATTGGCAATCAGTACAAGAACCGAGCTTGATCCAGCTGCATGGTGGCAACAACATGGGATAAGTTGCTTAGAGCTGCAGCGTATTGCTGTGCGTATTTTAAGTCAGACGTGCTCGTCTTTTGGTTGTGAGCATAACTGGAGTATATACGATCAATTGTACAGTTTAAGAAATAATCGTTTAGCTCAAAAAAGATTGAATGACCTCATCTACGTACACTACAATCTGCGTCTTAGAGAACAACAATTACAATTACGAAGAAGGGCTGATAATTCGATCTCCCTCGACAATGTTCTGTTAGAGCGTTTGCTAGATGACTGGATTGTAGACGCCGCCGAAAATGACATGCTAGAAAATGAGGAAGTCCTTTACAATGAAATTGAACAGGTTGATGAATACGAGAATGATATGGTTGATTATGAAGGTGTAAATGGAAATGCAGAGACTAGGAACGGATCGGTCGAGCTGGTAACTTTGGCTGATGCAGATATCAATCCTGCCAATGCTGGTGTTGCCACTGATGATGACGATGAAGATGATGAGGATGGCGATATAAACTTTTTCGATGATGACATGAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

925

Amino Acids

105.62

Weight (kDa)

5.86

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17450 AT3G17450
fragaria_vesca	FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491 FvH4_4g21491
malus_domestica	MD13G1139200.v1.1 MD16G1136600.v1.1
prunus_persica	Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1 Prupe.1G105600_v2.0.a1
pyrus_communis	pycom13g12110 pycom16g12020 pycom16g12030 pycom16g12040
rosa_chinensis	RchiOBHm_Chr4g0427461
rosa_laevigata	RLG00000007243
rosa_roxburghii	Rroxscaffold_5G00369110
rosa_rugosa	Rorug04G0208700
rosa_samantha	Rh4AG274500 Rh4BG280200 Rh4CG295200 Rh4DG277700
rosa_wichuraiana	Rw4G023780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
AasI	GACNNNNNNGTC	1 cut(s)	2305
AccB7I	CCANNNNNTGG	1 cut(s)	1084
AccI	GTMKAC	3 cut(s)	1038, 1272, 2517
AciI	CCGC	3 cut(s)	964, 1520, 2523
AclWI	GGATC	2 cut(s)	2216, 2653
AcoI	YGGCCR	2 cut(s)	1066, 1075
AcuI	CTGAAG	3 cut(s)	327, 1269, 1610
AcyI	GRCGYC	2 cut(s)	1172, 2520
AdeI	CACNNNGTG	1 cut(s)	1191
AfaI	GTAC	8 cut(s)	248, 652, 841, 1901, 1944, 2206, 2351, 2406
AfiI	CCNNNNNNNGG	4 cut(s)	94, 463, 842, 1084
AflIII	ACRYGT	2 cut(s)	687, 1896
AhdI	GACNNNNNGTC	1 cut(s)	1870
AjiI	CACGTC	1 cut(s)	2301
AjnI	CCWGG	6 cut(s)	88, 457, 574, 1077, 1155, 1175
Alw21I	GWGCWC	2 cut(s)	1739, 2306
Alw26I	GTCTC	4 cut(s)	661, 1212, 1618, 2627
AlwI	GGATC	2 cut(s)	2216, 2653
Ama87I	CYCGRG	1 cut(s)	198
AoxI	GGCC	4 cut(s)	799, 1066, 1075, 1258
ApeKI	GCWGC	8 cut(s)	746, 1025, 1333, 1412, 2018, 2228, 2266, 2269
ArsI	GACNNNNNNTTYG	2 cut(s)	674, 706
AseI	ATTAAT	2 cut(s)	1106, 1238
Asp700I	GAANNNNTTC	4 cut(s)	280, 615, 1448, 2134
AspA2I	CCTAGG	1 cut(s)	296
AspLEI	GCGC	2 cut(s)	69, 2068
AspS9I	GGNCC	5 cut(s)	799, 1259, 1455, 1678, 1825
AsuC2I	CCSGG	2 cut(s)	1639, 2006
AsuHPI	GGTGA	5 cut(s)	413, 514, 684, 797, 1373
AsuII	TTCGAA	1 cut(s)	1319
AvaI	CYCGRG	1 cut(s)	198
AvaII	GGWCC	3 cut(s)	1455, 1678, 1825
AvrII	CCTAGG	1 cut(s)	296
AxyI	CCTNAGG	1 cut(s)	606
BalI	TGGCCA	2 cut(s)	1068, 1077
BarI	GAAGNNNNNNTAC	2 cut(s)	1544, 1576
Bbv12I	GWGCWC	2 cut(s)	1739, 2306
BbvI	GCAGC	8 cut(s)	733, 1037, 1320, 1399, 2005, 2215, 2253, 2281
BccI	CCATC	6 cut(s)	87, 391, 776, 1351, 2044, 2729
BceAI	ACGGC	1 cut(s)	2079
BciT130I	CCWGG	6 cut(s)	90, 459, 576, 1079, 1157, 1177
BclI	TGATCA	1 cut(s)	1480
BcnI	CCSGG	2 cut(s)	1639, 2006
BcoDI	GTCTC	4 cut(s)	661, 1212, 1618, 2627
BfaI	CTAG	8 cut(s)	297, 567, 875, 1401, 1650, 2501, 2540, 2637
BfmI	CTRYAG	3 cut(s)	704, 1802, 2267
BglI	GCCNNNNNGGC	1 cut(s)	1074
BisI	GCNGC	9 cut(s)	747, 1026, 1334, 1413, 2019, 2229, 2267, 2270, 2523
BlnI	CCTAGG	1 cut(s)	296
BlsI	GCNGC	9 cut(s)	748, 1027, 1335, 1414, 2020, 2230, 2268, 2271, 2524
BmcAI	AGTACT	1 cut(s)	841
Bme1390I	CCNGG	8 cut(s)	90, 459, 576, 1079, 1157, 1177, 1639, 2006
Bme18I	GGWCC	3 cut(s)	1455, 1678, 1825
BmeRI	GACNNNNNGTC	1 cut(s)	1870
BmeT110I	CYCGRG	1 cut(s)	198
BmgBI	CACGTC	1 cut(s)	2301
BmgT120I	GGNCC	5 cut(s)	799, 1259, 1455, 1678, 1825
BmiI	GGNNCC	5 cut(s)	234, 1457, 1827, 2115, 2188
BmrFI	CCNGG	8 cut(s)	90, 459, 576, 1079, 1157, 1177, 1639, 2006
BmrI	ACTGGG	2 cut(s)	831, 1197
BmsI	GCATC	9 cut(s)	655, 763, 1041, 1282, 1303, 2070, 2109, 2150, 2662
BmuI	ACTGGG	2 cut(s)	831, 1197
BpmI	CTGGAG	5 cut(s)	219, 228, 597, 2132, 2350
Bpu10I	CCTNAGC	1 cut(s)	480
Bpu14I	TTCGAA	1 cut(s)	1319
BpuEI	CTTGAG	1 cut(s)	96
BpuMI	CCSGG	2 cut(s)	1639, 2006
BsaAI	YACGTR	2 cut(s)	1946, 2404
BsaBI	GATNNNNATC	2 cut(s)	1916, 2682
BsaHI	GRCGYC	2 cut(s)	1172, 2520
BsaI	GGTCTC	1 cut(s)	1618
BsaJI	CCNNGG	7 cut(s)	88, 296, 457, 458, 1078, 1176, 2073
BsaWI	WCCGGW	1 cut(s)	1683
Bsc4I	CCNNNNNNNGG	4 cut(s)	94, 463, 842, 1084
Bse1I	ACTGG	8 cut(s)	658, 837, 847, 1192, 1470, 1693, 2333, 2513
Bse21I	CCTNAGG	1 cut(s)	606
Bse3DI	GCAATG	1 cut(s)	827
Bse8I	GATNNNNATC	2 cut(s)	1916, 2682
BseBI	CCWGG	6 cut(s)	90, 459, 576, 1079, 1157, 1177
BseDI	CCNNGG	7 cut(s)	88, 296, 457, 458, 1078, 1176, 2073
BseGI	GGATG	4 cut(s)	98, 247, 490, 2740
BseJI	GATNNNNATC	2 cut(s)	1916, 2682
BseLI	CCNNNNNNNGG	4 cut(s)	94, 463, 842, 1084
BseMI	GCAATG	1 cut(s)	827
BseMII	CTCAG	5 cut(s)	494, 597, 1215, 1619, 1745
BseNI	ACTGG	8 cut(s)	658, 837, 847, 1192, 1470, 1693, 2333, 2513
BseRI	GAGGAG	2 cut(s)	61, 420
BseXI	GCAGC	8 cut(s)	733, 1037, 1320, 1399, 2005, 2215, 2253, 2281
Bsh1285I	CGRYCG	1 cut(s)	2652
BshFI	GGCC	4 cut(s)	801, 1068, 1077, 1260
BsiEI	CGRYCG	1 cut(s)	2652
BsiHKAI	GWGCWC	2 cut(s)	1739, 2306
BsiHKCI	CYCGRG	1 cut(s)	198
BsiSI	CCGG	3 cut(s)	1639, 1684, 2006
BslI	CCNNNNNNNGG	4 cut(s)	94, 463, 842, 1084
BsmAI	GTCTC	4 cut(s)	661, 1212, 1618, 2627
BsmI	GAATGC	1 cut(s)	301
BsnI	GGCC	4 cut(s)	801, 1068, 1077, 1260
Bso31I	GGTCTC	1 cut(s)	1618
BsoBI	CYCGRG	1 cut(s)	198
Bsp119I	TTCGAA	1 cut(s)	1319
Bsp1286I	GDGCHC	2 cut(s)	1739, 2306
Bsp1407I	TGTACA	3 cut(s)	246, 1899, 2349
Bsp143I	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
BspACI	CCGC	3 cut(s)	964, 1520, 2523
BspANI	GGCC	4 cut(s)	801, 1068, 1077, 1260
BspCNI	CTCAG	5 cut(s)	493, 598, 1216, 1618, 1744
BspLI	GGNNCC	5 cut(s)	234, 1457, 1827, 2115, 2188
BspMAI	CTGCAG	2 cut(s)	708, 2271
BspPI	GGATC	2 cut(s)	2216, 2653
BspT104I	TTCGAA	1 cut(s)	1319
BspTNI	GGTCTC	1 cut(s)	1618
BsrDI	GCAATG	1 cut(s)	827
BsrGI	TGTACA	3 cut(s)	246, 1899, 2349
BsrI	ACTGG	8 cut(s)	658, 837, 847, 1192, 1470, 1693, 2333, 2513
BssECI	CCNNGG	7 cut(s)	88, 296, 457, 458, 1078, 1176, 2073
BssMI	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
BssNAI	GTATAC	2 cut(s)	1039, 1273
BssNI	GRCGYC	2 cut(s)	1172, 2520
BssT1I	CCWWGG	1 cut(s)	296
Bst1107I	GTATAC	2 cut(s)	1039, 1273
Bst2UI	CCWGG	6 cut(s)	90, 459, 576, 1079, 1157, 1177
Bst4CI	ACNGT	7 cut(s)	56, 149, 1211, 1629, 1806, 2123, 2354
Bst6I	CTCTTC	5 cut(s)	351, 438, 1347, 1425, 1586
BstACI	GRCGYC	2 cut(s)	1172, 2520
BstAPI	GCANNNNNTGC	2 cut(s)	516, 1913
BstAUI	TGTACA	3 cut(s)	246, 1899, 2349
BstBAI	YACGTR	2 cut(s)	1946, 2404
BstBI	TTCGAA	1 cut(s)	1319
BstC8I	GCNNGC	2 cut(s)	321, 1673
BstDEI	CTNAG	8 cut(s)	480, 606, 1224, 1605, 1694, 1731, 2260, 2423
BstF5I	GGATG	4 cut(s)	98, 247, 490, 2740
BstHHI	GCGC	2 cut(s)	69, 2068
BstKTI	GATC	8 cut(s)	703, 724, 869, 1483, 2224, 2344, 2469, 2648
BstMAI	GTCTC	4 cut(s)	661, 1212, 1618, 2627
BstMBI	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
BstMCI	CGRYCG	1 cut(s)	2652
BstMWI	GCNNNNNNNGC	5 cut(s)	516, 1074, 1178, 1913, 2702
BstNI	CCWGG	6 cut(s)	90, 459, 576, 1079, 1157, 1177
BstNSI	RCATGY	5 cut(s)	368, 602, 691, 1900, 2539
BstSCI	CCNGG	8 cut(s)	88, 457, 574, 1077, 1155, 1175, 1637, 2004
BstSFI	CTRYAG	3 cut(s)	704, 1802, 2267
BstSNI	TACGTA	2 cut(s)	1946, 2404
BstV1I	GCAGC	8 cut(s)	733, 1037, 1320, 1399, 2005, 2215, 2253, 2281
BstXI	CCANNNNNNTGG	2 cut(s)	1688, 2232
BstZ17I	GTATAC	2 cut(s)	1039, 1273
Bsu36I	CCTNAGG	1 cut(s)	606
BsuRI	GGCC	4 cut(s)	801, 1068, 1077, 1260
BtgZI	GCGATG	1 cut(s)	2093
BtrI	CACGTC	1 cut(s)	2301
BtsCI	GGATG	4 cut(s)	98, 247, 490, 2740
BtsIMutI	CAGTG	8 cut(s)	52, 1185, 1221, 1296, 1739, 1827, 2128, 2706
Cac8I	GCNNGC	2 cut(s)	321, 1673
CfoI	GCGC	2 cut(s)	69, 2068
Cfr13I	GGNCC	5 cut(s)	799, 1259, 1455, 1678, 1825
CseI	GACGC	3 cut(s)	1161, 2408, 2528
Csp6I	GTAC	8 cut(s)	247, 651, 840, 1900, 1943, 2205, 2350, 2405
CspCI	CAANNNNNGTGG	2 cut(s)	130, 165
CviQI	GTAC	8 cut(s)	247, 651, 840, 1900, 1943, 2205, 2350, 2405
DdeI	CTNAG	8 cut(s)	480, 606, 1224, 1605, 1694, 1731, 2260, 2423
DpnI	GATC	8 cut(s)	702, 723, 868, 1482, 2223, 2343, 2468, 2647
DpnII	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
DraI	TTTAAA	2 cut(s)	553, 862
DraIII	CACNNNGTG	1 cut(s)	1191
DrdI	GACNNNNNNGTC	1 cut(s)	2305
DriI	GACNNNNNGTC	1 cut(s)	1870
DseDI	GACNNNNNNGTC	1 cut(s)	2305
EaeI	YGGCCR	2 cut(s)	1066, 1075
Eam1104I	CTCTTC	5 cut(s)	351, 438, 1347, 1425, 1586
Eam1105I	GACNNNNNGTC	1 cut(s)	1870
EarI	CTCTTC	5 cut(s)	351, 438, 1347, 1425, 1586
Eco105I	TACGTA	2 cut(s)	1946, 2404
Eco130I	CCWWGG	1 cut(s)	296
Eco31I	GGTCTC	1 cut(s)	1618
Eco32I	GATATC	2 cut(s)	2048, 2680
Eco47I	GGWCC	3 cut(s)	1455, 1678, 1825
Eco57I	CTGAAG	3 cut(s)	327, 1269, 1610
Eco81I	CCTNAGG	1 cut(s)	606
Eco88I	CYCGRG	1 cut(s)	198
EcoRI	GAATTC	2 cut(s)	570, 1816
EcoRII	CCWGG	6 cut(s)	88, 457, 574, 1077, 1155, 1175
EcoRV	GATATC	2 cut(s)	2048, 2680
EcoT14I	CCWWGG	1 cut(s)	296
EcoT22I	ATGCAT	1 cut(s)	512
ErhI	CCWWGG	1 cut(s)	296
FalI	AAGNNNNNCTT	4 cut(s)	603, 635, 1119, 1151
FauI	CCCGC	1 cut(s)	971
FbaI	TGATCA	1 cut(s)	1480
FblI	GTMKAC	3 cut(s)	1038, 1272, 2517
Fnu4HI	GCNGC	9 cut(s)	747, 1026, 1334, 1413, 2019, 2229, 2267, 2270, 2523
FokI	GGATG	4 cut(s)	105, 254, 497, 2747
Fsp4HI	GCNGC	9 cut(s)	747, 1026, 1334, 1413, 2019, 2229, 2267, 2270, 2523
FspBI	CTAG	8 cut(s)	297, 567, 875, 1401, 1650, 2501, 2540, 2637
GlaI	GCGC	2 cut(s)	68, 2067
GluI	GCNGC	9 cut(s)	747, 1026, 1334, 1413, 2019, 2229, 2267, 2270, 2523
GsuI	CTGGAG	5 cut(s)	219, 228, 597, 2132, 2350
HaeIII	GGCC	4 cut(s)	801, 1068, 1077, 1260
HapII	CCGG	3 cut(s)	1639, 1684, 2006
HgaI	GACGC	3 cut(s)	1161, 2408, 2528
HhaI	GCGC	2 cut(s)	69, 2068
Hin1I	GRCGYC	2 cut(s)	1172, 2520
Hin6I	GCGC	2 cut(s)	67, 2066
HinP1I	GCGC	2 cut(s)	67, 2066
HincII	GTYRAC	3 cut(s)	85, 426, 454
HindII	GTYRAC	3 cut(s)	85, 426, 454
HindIII	AAGCTT	1 cut(s)	1669
HinfI	GANTC	3 cut(s)	26, 677, 878
HpaI	GTTAAC	1 cut(s)	426
HpaII	CCGG	3 cut(s)	1639, 1684, 2006
HphI	GGTGA	5 cut(s)	413, 514, 684, 797, 1373
Hpy188I	TCNGA	7 cut(s)	307, 712, 850, 941, 1590, 2158, 2298
HpyAV	CCTTC	9 cut(s)	266, 651, 1528, 1606, 1745, 1798, 2124, 2445, 2606
HpyCH4III	ACNGT	7 cut(s)	56, 149, 1211, 1629, 1806, 2123, 2354
HpyCH4IV	ACGT	3 cut(s)	1945, 2300, 2403
HpyF10VI	GCNNNNNNNGC	5 cut(s)	516, 1074, 1178, 1913, 2702
HpyF3I	CTNAG	8 cut(s)	480, 606, 1224, 1605, 1694, 1731, 2260, 2423
HpySE526I	ACGT	3 cut(s)	1945, 2300, 2403
Hsp92I	GRCGYC	2 cut(s)	1172, 2520
HspAI	GCGC	2 cut(s)	67, 2066
Ksp22I	TGATCA	1 cut(s)	1480
KspAI	GTTAAC	1 cut(s)	426
Kzo9I	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
LmnI	GCTCC	6 cut(s)	74, 238, 607, 901, 1742, 2113
Lsp1109I	GCAGC	8 cut(s)	733, 1037, 1320, 1399, 2005, 2215, 2253, 2281
LweI	GCATC	9 cut(s)	655, 763, 1041, 1282, 1303, 2070, 2109, 2150, 2662
MaeI	CTAG	8 cut(s)	297, 567, 875, 1401, 1650, 2501, 2540, 2637
MaeII	ACGT	3 cut(s)	1945, 2300, 2403
MaeIII	GTNAC	4 cut(s)	214, 401, 690, 2659
MalI	GATC	8 cut(s)	702, 723, 868, 1482, 2223, 2343, 2468, 2647
MboI	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
MfeI	CAATTG	2 cut(s)	392, 2345
MhlI	GDGCHC	2 cut(s)	1739, 2306
MlsI	TGGCCA	2 cut(s)	1068, 1077
MluNI	TGGCCA	2 cut(s)	1068, 1077
MmeI	TCCRAC	1 cut(s)	1193
Mox20I	TGGCCA	2 cut(s)	1068, 1077
Mph1103I	ATGCAT	1 cut(s)	512
MroXI	GAANNNNTTC	4 cut(s)	280, 615, 1448, 2134
MscI	TGGCCA	2 cut(s)	1068, 1077
MslI	CAYNNNNRTG	2 cut(s)	254, 1732
Msp20I	TGGCCA	2 cut(s)	1068, 1077
MspA1I	CMGCKG	1 cut(s)	2228
MspI	CCGG	3 cut(s)	1639, 1684, 2006
MspR9I	CCNGG	8 cut(s)	90, 459, 576, 1079, 1157, 1177, 1639, 2006
MssI	GTTTAAAC	1 cut(s)	553
MunI	CAATTG	2 cut(s)	392, 2345
Mva1269I	GAATGC	1 cut(s)	301
MvaI	CCWGG	6 cut(s)	90, 459, 576, 1079, 1157, 1177
MwoI	GCNNNNNNNGC	5 cut(s)	516, 1074, 1178, 1913, 2702
NciI	CCSGG	2 cut(s)	1639, 2006
NdeII	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
NlaIV	GGNNCC	5 cut(s)	234, 1457, 1827, 2115, 2188
NmuCI	GTSAC	2 cut(s)	401, 690
NsiI	ATGCAT	1 cut(s)	512
NspI	RCATGY	5 cut(s)	368, 602, 691, 1900, 2539
NspV	TTCGAA	1 cut(s)	1319
PasI	CCCWGGG	1 cut(s)	458
PciI	ACATGT	2 cut(s)	687, 1896
PcsI	WCGNNNNNNNCGW	1 cut(s)	2649
PctI	GAATGC	1 cut(s)	301
PdmI	GAANNNNTTC	4 cut(s)	280, 615, 1448, 2134
PfeI	GAWTC	3 cut(s)	26, 677, 878
PflMI	CCANNNNNTGG	1 cut(s)	1084
PfoI	TCCNGGA	1 cut(s)	574
PkrI	GCNGC	9 cut(s)	748, 1027, 1335, 1414, 2020, 2230, 2268, 2271, 2524
PmeI	GTTTAAAC	1 cut(s)	553
Ppu21I	YACGTR	2 cut(s)	1946, 2404
PscI	ACATGT	2 cut(s)	687, 1896
PshBI	ATTAAT	2 cut(s)	1106, 1238
PsiI	TTATAA	1 cut(s)	1167
Psp6I	CCWGG	6 cut(s)	88, 457, 574, 1077, 1155, 1175
PspGI	CCWGG	6 cut(s)	88, 457, 574, 1077, 1155, 1175
PspN4I	GGNNCC	5 cut(s)	234, 1457, 1827, 2115, 2188
PspPI	GGNCC	5 cut(s)	799, 1259, 1455, 1678, 1825
PsrI	GAACNNNNNNTAC	2 cut(s)	2421, 2453
PstI	CTGCAG	2 cut(s)	708, 2271
PvuII	CAGCTG	1 cut(s)	2228
RsaI	GTAC	8 cut(s)	248, 652, 841, 1901, 1944, 2206, 2351, 2406
RsaNI	GTAC	8 cut(s)	247, 651, 840, 1900, 1943, 2205, 2350, 2405
RseI	CAYNNNNRTG	2 cut(s)	254, 1732
SatI	GCNGC	9 cut(s)	747, 1026, 1334, 1413, 2019, 2229, 2267, 2270, 2523
Sau3AI	GATC	8 cut(s)	700, 721, 866, 1480, 2221, 2341, 2466, 2645
Sau96I	GGNCC	5 cut(s)	799, 1259, 1455, 1678, 1825
ScaI	AGTACT	1 cut(s)	841
ScrFI	CCNGG	8 cut(s)	90, 459, 576, 1079, 1157, 1177, 1639, 2006
SduI	GDGCHC	2 cut(s)	1739, 2306
SfaNI	GCATC	9 cut(s)	655, 763, 1041, 1282, 1303, 2070, 2109, 2150, 2662
SfcI	CTRYAG	3 cut(s)	704, 1802, 2267
SfiI	GGCCNNNNNGGCC	1 cut(s)	1074
SfuI	TTCGAA	1 cut(s)	1319
SinI	GGWCC	3 cut(s)	1455, 1678, 1825
SmiMI	CAYNNNNRTG	2 cut(s)	254, 1732
SmlI	CTYRAG	1 cut(s)	111
SmoI	CTYRAG	1 cut(s)	111
SnaBI	TACGTA	2 cut(s)	1946, 2404
SsiI	CCGC	3 cut(s)	964, 1520, 2523
SspMI	CTAG	8 cut(s)	297, 567, 875, 1401, 1650, 2501, 2540, 2637
StyD4I	CCNGG	8 cut(s)	88, 457, 574, 1077, 1155, 1175, 1637, 2004
StyI	CCWWGG	1 cut(s)	296
TaaI	ACNGT	7 cut(s)	56, 149, 1211, 1629, 1806, 2123, 2354
TaiI	ACGT	3 cut(s)	1948, 2303, 2406
TaqI	TCGA	6 cut(s)	1319, 2050, 2465, 2475, 2652, 2754
TaqII	GACCGA	2 cut(s)	426, 2638
TatI	WGTACW	5 cut(s)	246, 839, 1899, 2204, 2349
TauI	GCSGC	1 cut(s)	2525
TfiI	GAWTC	3 cut(s)	26, 677, 878
TscAI	CASTG	8 cut(s)	59, 1192, 1228, 1303, 1739, 1827, 2128, 2713
TseFI	GTSAC	2 cut(s)	401, 690
TseI	GCWGC	8 cut(s)	746, 1025, 1333, 1412, 2018, 2228, 2266, 2269
Tsp45I	GTSAC	2 cut(s)	401, 690
TspGWI	ACGGA	2 cut(s)	1024, 2658
TspRI	CASTG	8 cut(s)	59, 1192, 1228, 1303, 1739, 1827, 2128, 2713
Van91I	CCANNNNNTGG	1 cut(s)	1084
VpaK11BI	GGWCC	3 cut(s)	1455, 1678, 1825
VspI	ATTAAT	2 cut(s)	1106, 1238
XceI	RCATGY	5 cut(s)	368, 602, 691, 1900, 2539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2232
XmaJI	CCTAGG	1 cut(s)	296
XmiI	GTMKAC	3 cut(s)	1038, 1272, 2517
XmnI	GAANNNNTTC	4 cut(s)	280, 615, 1448, 2134
XspI	CTAG	8 cut(s)	297, 567, 875, 1401, 1650, 2501, 2540, 2637
ZrmI	AGTACT	1 cut(s)	841
Zsp2I	ATGCAT	1 cut(s)	512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.