Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0014209

Physical Location & Seq

Genomic Coordinates Forward (+)

27128232 .. 27130154

Gene Structure 1923 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25271.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGAAGCTCCGACCGTGGCTCTCCGCCACATGCTCCTCCCGCACATCCACCGTCTCCGTCCCTCAACCCCAACCCACATACCAAAAACGACATGTCGTGTCGGACGCTAGCAGCTCCTCCGATAACCATGGCAGCTCCTCCAGTAGCGACACCTGCAGCACCAGCCTCCACTCCAACCTCTCCCTCCAGACGCTGCCATCTGTCCCCTCCCTCCAGAAGCTCATCTCCCAACTTGACGCCCCAACCCTCTCCGTCTCCCATCTCTGCTTCACCACTCTCACTCCAAGCCTTTCCTCCCTCCAGATCACCTGCCTCGCCGTCCACCACAACCGCCTCTACACCGCCTCCGGCCACGAAATCAACGTCTACGATTTATCCGACTTCTCTCATCTAGACTCATTCAACGCTCACGATGCCTCCTCCGGCTCCGTTAAGTCCGTCTCCTTTTCCGACTCCAAGGTCTTCACAGCTCACCAGGACTGTAAAATCAAAGTCTGGGAGATCATCCCAGGTAAACGCCACAAGCTCCTCGCCATGCTTCCAACCGTTAACGACCGTTTGCTTCGTTTCGCGCTCCCCAAGAACTACGTCACCATACGCCGTCACGTAAAACGCCTCTGGATCCAGCACGCCGACGCCGTTACCGGCATCGCCGTCAACGATGGACTCGTCTACTCAGTCTCATGGGACAAGAGCTTGAAGATATGGCGGGACTCAAGCCTCCGGTGCGTGGAGTCAGTGAAGGCGCACGAGGACGCCGTGAGCGCGGTTGCGGTGGCGAAAGACGGGACGATCTACACAGGCTCAGCGGACCGGCGTATCCGGGTGTGGGCGAAACCGCAAGACGGGAAGTGCCACGTGTTGGTGGCGACGCTGGAGAAGCATAAATCGGCGGTGAATGCTTTGGCTCTAAACGACGACGGATCGGTGCTGTTTTCGGGTGCTTGTGATCGGTCGATATTGGTGTGGGAGAGAGAGGACAGCGCGAACCACATGGCGGTGACGGGAGCGTTGAGGGGGCATGGGAAAGCGATACTGTGTTTGTTCAACGTCGGGGATTTGCTGCTGAGTGGGTCGGCTGATTGGACGGTGAGGATGTGGAGGCGCGGGGAGGATGGGACTTATTGCTGCTTGGGGGTTTTGGAGGGACACGTGAAACCGGTGAAGGCGGTGGTGGCGGTTACGGGAGAGAGTGGTGGCGATGGCGACGGCGTCGTTAAGGTTGTGAGTGGAAGTTTAGATGGAGTGGTGAAGGTGTGGCATGTGTCGGTTTCGGAGGCGATGAAAGAACGGAAGATGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

435

Amino Acids

47.12

Weight (kDa)

8.78

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	101 - 285	1.8e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	209 - 278	1.7e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	209 - 391	5.8e-19	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	210 - 368	1.2e-10	WDHD1 first WD40 domain
Beta-prop_WDR3_2nd	PF25172	218 - 327	9.6e-14	WDR3 second beta-propeller domain
NBCH_WD40	PF20426	219 - 278	8.8e-07	Neurobeachin beta propeller domain
WD40_Prp19	PF24814	220 - 304	1.9e-09	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	222 - 348	2e-08	Echinoderm microtubule-associated protein second beta-propeller
WDR55	PF24796	222 - 422	3.9e-09	WDR55
WD40_CDC20-Fz	PF24807	230 - 368	5.8e-12	CDC20/Fizzy WD40 domain
WD40_Gbeta	PF25391	238 - 368	6.7e-09	G protein beta WD-40 repeat protein
WD40	PF00400	242 - 277	8.7e-06	WD domain, G-beta repeat
Beta-prop_WDR75_1st	PF23869	249 - 329	1.6e-06	WD repeat-containing protein 75 first beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	264 - 369	9.5e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	267 - 429	7.2e-22	WDR5 beta-propeller domain
WD40	PF00400	288 - 323	3.8e-07	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	288 - 429	5.6e-16	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	290 - 424	3.4e-11	TEP-1 second beta-propeller
WD40_Prp19	PF24814	299 - 391	3.5e-07	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24530
fragaria_vesca	FvH4_4g25271
malus_domestica	MD13G1105300.v1.1 MD16G1105400.v1.1
prunus_persica	Prupe.1G241300_v2.0.a1
pyrus_communis	pycom13g09130 pycom16g08970
rosa_chinensis	RchiOBHm_Chr4g0432531
rosa_laevigata	RLG00000006834
rosa_multiflora	Rmu_sc0009980.1_g000001
rosa_roxburghii	Rroxscaffold_5G00373980
rosa_rugosa	Rorug04G0260000.1
rosa_samantha	Rh4AG314800 Rh4BG322500 Rh4CG337700 Rh4DG318500
rosa_wichuraiana	Rw4G027370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	161, 317
AasI	GACNNNNNNGTC	1 cut(s)	458
Acc36I	ACCTGC	2 cut(s)	161, 317
AccB7I	CCANNNNNTGG	1 cut(s)	862
AccI	GTMKAC	2 cut(s)	366, 672
AccII	CGCG	4 cut(s)	572, 767, 986, 1107
AclWI	GGATC	3 cut(s)	616, 629, 931
AcoI	YGGCCR	1 cut(s)	349
AcvI	CACGTG	2 cut(s)	859, 1153
AcyI	GRCGYC	4 cut(s)	237, 636, 756, 1212
AfiI	CCNNNNNNNGG	5 cut(s)	730, 829, 845, 862, 997
AflIII	ACRYGT	3 cut(s)	91, 858, 1150
AgeI	ACCGGT	1 cut(s)	1159
AgsI	TTSAA	3 cut(s)	403, 700, 1048
AjnI	CCWGG	2 cut(s)	474, 508
AluBI	AGCT	7 cut(s)	7, 114, 135, 220, 470, 526, 696
AluI	AGCT	7 cut(s)	7, 114, 135, 220, 470, 526, 696
Alw26I	GTCTC	4 cut(s)	58, 259, 445, 685
AlwI	GGATC	3 cut(s)	616, 629, 931
AlwNI	CAGNNNCTG	1 cut(s)	193
AoxI	GGCC	1 cut(s)	349
ApeKI	GCWGC	6 cut(s)	111, 132, 156, 193, 1063, 1128
ArsI	GACNNNNNNTTYG	2 cut(s)	348, 380
AsiGI	ACCGGT	1 cut(s)	1159
AspLEI	GCGC	5 cut(s)	574, 748, 767, 986, 1107
AspS9I	GGNCC	1 cut(s)	811
AsuC2I	CCSGG	1 cut(s)	824
AsuHPI	GGTGA	9 cut(s)	262, 298, 464, 583, 907, 1012, 1102, 1174, 1261
AsuNHI	GCTAGC	1 cut(s)	107
AvaII	GGWCC	1 cut(s)	811
BaeI	ACNNNNGTAYC	2 cut(s)	802, 835
BamHI	GGATCC	1 cut(s)	621
BauI	CACGAG	1 cut(s)	749
BbrPI	CACGTG	2 cut(s)	859, 1153
BbsI	GAAGAC	1 cut(s)	454
BbvI	GCAGC	6 cut(s)	123, 144, 168, 180, 1050, 1115
BccI	CCATC	6 cut(s)	205, 267, 656, 1109, 1196, 1235
BceAI	ACGGC	6 cut(s)	302, 585, 623, 638, 743, 1225
BciT130I	CCWGG	2 cut(s)	476, 510
BciVI	GTATCC	1 cut(s)	830
BcnI	CCSGG	1 cut(s)	824
BcoDI	GTCTC	4 cut(s)	58, 259, 445, 685
BfaI	CTAG	2 cut(s)	108, 392
BfmI	CTRYAG	1 cut(s)	154
BfuAI	ACCTGC	2 cut(s)	161, 317
BfuI	GTATCC	1 cut(s)	830
BisI	GCNGC	6 cut(s)	112, 133, 157, 194, 1064, 1129
BlpI	GCTNAGC	1 cut(s)	805
BlsI	GCNGC	6 cut(s)	113, 134, 158, 195, 1065, 1130
Bme1390I	CCNGG	3 cut(s)	476, 510, 824
Bme18I	GGWCC	1 cut(s)	811
BmgT120I	GGNCC	1 cut(s)	811
BmiI	GGNNCC	2 cut(s)	427, 623
BmrFI	CCNGG	3 cut(s)	476, 510, 824
BmsI	GCATC	2 cut(s)	403, 657
BmtI	GCTAGC	1 cut(s)	111
BpiI	GAAGAC	1 cut(s)	454
BpmI	CTGGAG	5 cut(s)	124, 170, 197, 284, 896
Bpu1102I	GCTNAGC	1 cut(s)	805
BpuEI	CTTGAG	1 cut(s)	700
BpuMI	CCSGG	1 cut(s)	824
BsaAI	YACGTR	3 cut(s)	607, 859, 1153
BsaHI	GRCGYC	4 cut(s)	237, 636, 756, 1212
BsaJI	CCNNGG	4 cut(s)	14, 127, 456, 508
BsaWI	WCCGGW	2 cut(s)	723, 1159
BsaXI	ACNNNNNCTCC	6 cut(s)	265, 295, 329, 359, 401, 431
Bsc4I	CCNNNNNNNGG	5 cut(s)	730, 829, 845, 862, 997
Bse118I	RCCGGY	3 cut(s)	644, 813, 1159
Bse1I	ACTGG	1 cut(s)	141
BseBI	CCWGG	2 cut(s)	476, 510
BseDI	CCNNGG	4 cut(s)	14, 127, 456, 508
BseGI	GGATG	4 cut(s)	44, 504, 1101, 1120
BseLI	CCNNNNNNNGG	5 cut(s)	730, 829, 845, 862, 997
BseMII	CTCAG	3 cut(s)	690, 819, 1058
BseNI	ACTGG	1 cut(s)	141
BseRI	GAGGAG	5 cut(s)	25, 106, 127, 409, 518
BseXI	GCAGC	6 cut(s)	123, 144, 168, 180, 1050, 1115
Bsh1236I	CGCG	4 cut(s)	572, 767, 986, 1107
Bsh1285I	CGRYCG	3 cut(s)	14, 556, 956
BshFI	GGCC	1 cut(s)	351
BshTI	ACCGGT	1 cut(s)	1159
BsiEI	CGRYCG	3 cut(s)	14, 556, 956
BsiSI	CCGG	7 cut(s)	348, 423, 645, 724, 814, 823, 1160
BslFI	GGGAC	7 cut(s)	44, 188, 701, 725, 802, 1132, 1161
BslI	CCNNNNNNNGG	5 cut(s)	730, 829, 845, 862, 997
BsmAI	GTCTC	4 cut(s)	58, 259, 445, 685
BsmBI	CGTCTC	3 cut(s)	58, 259, 445
BsmFI	GGGAC	7 cut(s)	44, 188, 701, 725, 802, 1132, 1161
BsmI	GAATGC	1 cut(s)	904
BsnI	GGCC	1 cut(s)	351
Bsp143I	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
Bsp1720I	GCTNAGC	1 cut(s)	805
Bsp19I	CCATGG	1 cut(s)	127
BspANI	GGCC	1 cut(s)	351
BspCNI	CTCAG	3 cut(s)	689, 818, 1059
BspFNI	CGCG	4 cut(s)	572, 767, 986, 1107
BspLI	GGNNCC	2 cut(s)	427, 623
BspMAI	CTGCAG	1 cut(s)	158
BspMI	ACCTGC	2 cut(s)	161, 317
BspOI	GCTAGC	1 cut(s)	111
BspPI	GGATC	3 cut(s)	616, 629, 931
BsrFI	RCCGGY	3 cut(s)	644, 813, 1159
BsrI	ACTGG	1 cut(s)	141
BssAI	RCCGGY	3 cut(s)	644, 813, 1159
BssECI	CCNNGG	4 cut(s)	14, 127, 456, 508
BssMI	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
BssNI	GRCGYC	4 cut(s)	237, 636, 756, 1212
BssSI	CACGAG	1 cut(s)	749
BssT1I	CCWWGG	2 cut(s)	127, 456
Bst2BI	CACGAG	1 cut(s)	749
Bst2UI	CCWGG	2 cut(s)	476, 510
Bst4CI	ACNGT	7 cut(s)	15, 52, 482, 547, 557, 1038, 1090
BstACI	GRCGYC	4 cut(s)	237, 636, 756, 1212
BstBAI	YACGTR	3 cut(s)	607, 859, 1153
BstC8I	GCNNGC	2 cut(s)	109, 630
BstDEI	CTNAG	3 cut(s)	676, 805, 1067
BstDSI	CCRYGG	2 cut(s)	14, 127
BstF5I	GGATG	4 cut(s)	44, 504, 1101, 1120
BstFNI	CGCG	4 cut(s)	572, 767, 986, 1107
BstHHI	GCGC	5 cut(s)	574, 748, 767, 986, 1107
BstKTI	GATC	6 cut(s)	306, 504, 624, 795, 926, 952
BstMAI	GTCTC	4 cut(s)	58, 259, 445, 685
BstMBI	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
BstMCI	CGRYCG	3 cut(s)	14, 556, 956
BstMWI	GCNNNNNNNGC	9 cut(s)	39, 153, 162, 413, 726, 764, 880, 899, 1175
BstNI	CCWGG	2 cut(s)	476, 510
BstNSI	RCATGY	3 cut(s)	33, 95, 1265
BstSCI	CCNGG	3 cut(s)	474, 508, 822
BstSFI	CTRYAG	1 cut(s)	154
BstUI	CGCG	4 cut(s)	572, 767, 986, 1107
BstV1I	GCAGC	6 cut(s)	123, 144, 168, 180, 1050, 1115
BstV2I	GAAGAC	1 cut(s)	454
BstX2I	RGATCY	1 cut(s)	621
BstYI	RGATCY	1 cut(s)	621
BsuI	GTATCC	1 cut(s)	830
BsuRI	GGCC	1 cut(s)	351
BtgI	CCRYGG	2 cut(s)	14, 127
BtgZI	GCGATG	3 cut(s)	634, 1215, 1295
BtsCI	GGATG	4 cut(s)	44, 504, 1101, 1120
BtsIMutI	CAGTG	1 cut(s)	744
BveI	ACCTGC	2 cut(s)	161, 317
Cac8I	GCNNGC	2 cut(s)	109, 630
CaiI	CAGNNNCTG	1 cut(s)	193
CfoI	GCGC	5 cut(s)	574, 748, 767, 986, 1107
Cfr10I	RCCGGY	3 cut(s)	644, 813, 1159
Cfr13I	GGNCC	1 cut(s)	811
CpoI	CGGWCCG	1 cut(s)	811
CseI	GACGC	7 cut(s)	113, 199, 245, 644, 764, 880, 1201
CspAI	ACCGGT	1 cut(s)	1159
CspI	CGGWCCG	1 cut(s)	811
CviAII	CATG	8 cut(s)	30, 92, 128, 535, 684, 994, 1022, 1262
DdeI	CTNAG	3 cut(s)	676, 805, 1067
DpnI	GATC	6 cut(s)	305, 503, 623, 794, 925, 951
DpnII	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
DrdI	GACNNNNNNGTC	1 cut(s)	458
DseDI	GACNNNNNNGTC	1 cut(s)	458
EaeI	YGGCCR	1 cut(s)	349
EciI	GGCGGA	1 cut(s)	13
Eco130I	CCWWGG	2 cut(s)	127, 456
Eco47I	GGWCC	1 cut(s)	811
Eco72I	CACGTG	2 cut(s)	859, 1153
EcoRII	CCWGG	2 cut(s)	474, 508
EcoT14I	CCWWGG	2 cut(s)	127, 456
ErhI	CCWWGG	2 cut(s)	127, 456
Esp3I	CGTCTC	3 cut(s)	58, 259, 445
FaeI	CATG	8 cut(s)	33, 95, 131, 538, 687, 997, 1025, 1265
FaqI	GGGAC	7 cut(s)	44, 188, 701, 725, 802, 1132, 1161
FatI	CATG	8 cut(s)	29, 91, 127, 534, 683, 993, 1021, 1261
FauI	CCCGC	3 cut(s)	47, 702, 1100
FblI	GTMKAC	2 cut(s)	366, 672
Fnu4HI	GCNGC	6 cut(s)	112, 133, 157, 194, 1064, 1129
FokI	GGATG	4 cut(s)	31, 491, 1108, 1127
Fsp4HI	GCNGC	6 cut(s)	112, 133, 157, 194, 1064, 1129
FspBI	CTAG	2 cut(s)	108, 392
GlaI	GCGC	5 cut(s)	573, 747, 766, 985, 1106
GluI	GCNGC	6 cut(s)	112, 133, 157, 194, 1064, 1129
GsuI	CTGGAG	5 cut(s)	124, 170, 197, 284, 896
HaeIII	GGCC	1 cut(s)	351
HapII	CCGG	7 cut(s)	348, 423, 645, 724, 814, 823, 1160
HgaI	GACGC	7 cut(s)	113, 199, 245, 644, 764, 880, 1201
HhaI	GCGC	5 cut(s)	574, 748, 767, 986, 1107
Hin1I	GRCGYC	4 cut(s)	237, 636, 756, 1212
Hin1II	CATG	8 cut(s)	33, 95, 131, 538, 687, 997, 1025, 1265
Hin6I	GCGC	5 cut(s)	572, 746, 765, 984, 1105
HinP1I	GCGC	5 cut(s)	572, 746, 765, 984, 1105
HincII	GTYRAC	2 cut(s)	550, 658
HindII	GTYRAC	2 cut(s)	550, 658
HinfI	GANTC	5 cut(s)	395, 452, 666, 713, 734
HpaI	GTTAAC	1 cut(s)	550
HpaII	CCGG	7 cut(s)	348, 423, 645, 724, 814, 823, 1160
HphI	GGTGA	9 cut(s)	262, 298, 464, 583, 907, 1012, 1102, 1174, 1261
Hpy166II	GTNNAC	6 cut(s)	322, 367, 515, 550, 658, 673
Hpy188I	TCNGA	6 cut(s)	11, 103, 121, 379, 451, 1276
Hpy188III	TCNNGA	6 cut(s)	187, 214, 301, 392, 410, 619
Hpy8I	GTNNAC	6 cut(s)	322, 367, 515, 550, 658, 673
Hpy99I	CGWCG	7 cut(s)	638, 874, 920, 923, 1055, 1211, 1217
HpyAV	CCTTC	3 cut(s)	736, 1159, 1246
HpyCH4III	ACNGT	7 cut(s)	15, 52, 482, 547, 557, 1038, 1090
HpyCH4IV	ACGT	6 cut(s)	363, 588, 606, 858, 1050, 1152
HpyCH4V	TGCA	1 cut(s)	156
HpyF10VI	GCNNNNNNNGC	9 cut(s)	39, 153, 162, 413, 726, 764, 880, 899, 1175
HpyF3I	CTNAG	3 cut(s)	676, 805, 1067
HpySE526I	ACGT	6 cut(s)	363, 588, 606, 858, 1050, 1152
Hsp92I	GRCGYC	4 cut(s)	237, 636, 756, 1212
Hsp92II	CATG	8 cut(s)	33, 95, 131, 538, 687, 997, 1025, 1265
HspAI	GCGC	5 cut(s)	572, 746, 765, 984, 1105
KspAI	GTTAAC	1 cut(s)	550
Kzo9I	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
LmnI	GCTCC	8 cut(s)	12, 38, 119, 140, 431, 531, 579, 1007
Lsp1109I	GCAGC	6 cut(s)	123, 144, 168, 180, 1050, 1115
LweI	GCATC	2 cut(s)	403, 657
MaeI	CTAG	2 cut(s)	108, 392
MaeII	ACGT	6 cut(s)	363, 588, 606, 858, 1050, 1152
MaeIII	GTNAC	5 cut(s)	589, 602, 640, 1000, 1180
MalI	GATC	6 cut(s)	305, 503, 623, 794, 925, 951
MboI	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
MboII	GAAGA	2 cut(s)	454, 712
MflI	RGATCY	1 cut(s)	621
MlyI	GAGTC	5 cut(s)	389, 446, 660, 707, 743
MmeI	TCCRAC	6 cut(s)	34, 81, 198, 402, 474, 566
MseI	TTAA	3 cut(s)	432, 549, 1218
MslI	CAYNNNNRTG	1 cut(s)	998
MspA1I	CMGCKG	1 cut(s)	809
MspI	CCGG	7 cut(s)	348, 423, 645, 724, 814, 823, 1160
MspR9I	CCNGG	3 cut(s)	476, 510, 824
Mva1269I	GAATGC	1 cut(s)	904
MvaI	CCWGG	2 cut(s)	476, 510
MvnI	CGCG	4 cut(s)	572, 767, 986, 1107
MwoI	GCNNNNNNNGC	9 cut(s)	39, 153, 162, 413, 726, 764, 880, 899, 1175
NciI	CCSGG	1 cut(s)	824
NcoI	CCATGG	1 cut(s)	127
NdeII	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
NheI	GCTAGC	1 cut(s)	107
NlaIII	CATG	8 cut(s)	33, 95, 131, 538, 687, 997, 1025, 1265
NlaIV	GGNNCC	2 cut(s)	427, 623
NmuCI	GTSAC	3 cut(s)	589, 602, 1000
NspI	RCATGY	3 cut(s)	33, 95, 1265
PaqCI	CACCTGC	2 cut(s)	161, 317
PciI	ACATGT	1 cut(s)	91
PcsI	WCGNNNNNNNCGW	6 cut(s)	360, 375, 636, 657, 666, 756
PctI	GAATGC	1 cut(s)	904
PflFI	GACNNNGTC	1 cut(s)	1211
PflMI	CCANNNNNTGG	1 cut(s)	862
PinAI	ACCGGT	1 cut(s)	1159
PkrI	GCNGC	6 cut(s)	113, 134, 158, 195, 1065, 1130
PleI	GAGTC	5 cut(s)	389, 446, 660, 707, 742
PmaCI	CACGTG	2 cut(s)	859, 1153
PmlI	CACGTG	2 cut(s)	859, 1153
PpsI	GAGTC	5 cut(s)	389, 446, 660, 707, 742
Ppu21I	YACGTR	3 cut(s)	607, 859, 1153
PscI	ACATGT	1 cut(s)	91
Psp6I	CCWGG	2 cut(s)	474, 508
PspCI	CACGTG	2 cut(s)	859, 1153
PspGI	CCWGG	2 cut(s)	474, 508
PspN4I	GGNNCC	2 cut(s)	427, 623
PspPI	GGNCC	1 cut(s)	811
PstI	CTGCAG	1 cut(s)	158
PstNI	CAGNNNCTG	1 cut(s)	193
PsuI	RGATCY	1 cut(s)	621
PsyI	GACNNNGTC	1 cut(s)	1211
RseI	CAYNNNNRTG	1 cut(s)	998
Rsr2I	CGGWCCG	1 cut(s)	811
RsrII	CGGWCCG	1 cut(s)	811
SaqAI	TTAA	3 cut(s)	432, 549, 1218
SatI	GCNGC	6 cut(s)	112, 133, 157, 194, 1064, 1129
Sau3AI	GATC	6 cut(s)	303, 501, 621, 792, 923, 949
Sau96I	GGNCC	1 cut(s)	811
SchI	GAGTC	5 cut(s)	389, 446, 660, 707, 743
ScrFI	CCNGG	3 cut(s)	476, 510, 824
SfaNI	GCATC	2 cut(s)	403, 657
SfcI	CTRYAG	1 cut(s)	154
SinI	GGWCC	1 cut(s)	811
SmiMI	CAYNNNNRTG	1 cut(s)	998
SmlI	CTYRAG	1 cut(s)	715
SmoI	CTYRAG	1 cut(s)	715
SspMI	CTAG	2 cut(s)	108, 392
StyD4I	CCNGG	3 cut(s)	474, 508, 822
StyI	CCWWGG	2 cut(s)	127, 456
TaaI	ACNGT	7 cut(s)	15, 52, 482, 547, 557, 1038, 1090
TaiI	ACGT	6 cut(s)	366, 591, 609, 861, 1053, 1155
TaqI	TCGA	1 cut(s)	956
TaqII	GACCGA	1 cut(s)	942
Tru1I	TTAA	3 cut(s)	432, 549, 1218
Tru9I	TTAA	3 cut(s)	432, 549, 1218
TscAI	CASTG	1 cut(s)	744
TseFI	GTSAC	3 cut(s)	589, 602, 1000
TseI	GCWGC	6 cut(s)	111, 132, 156, 193, 1063, 1128
Tsp45I	GTSAC	3 cut(s)	589, 602, 1000
TspDTI	ATGAA	2 cut(s)	17, 1298
TspGWI	ACGGA	5 cut(s)	46, 241, 418, 427, 936
TspRI	CASTG	1 cut(s)	744
Tth111I	GACNNNGTC	1 cut(s)	1211
Van91I	CCANNNNNTGG	1 cut(s)	862
VpaK11BI	GGWCC	1 cut(s)	811
XbaI	TCTAGA	1 cut(s)	391
XceI	RCATGY	3 cut(s)	33, 95, 1265
XmiI	GTMKAC	2 cut(s)	366, 672
XspI	CTAG	2 cut(s)	108, 392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.