Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0014209

Physical Location & Seq

Genomic Coordinates Reverse (-)

10919849 .. 10921150

Gene Structure 1302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006834

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGAAGCTCCGATCGTGGTTCTCCGCCACATGCTCCTCCCACGAATCCACCGTCTCCATCCCCCAACCCCAACCCTCATACCAAAAACGACACGTCGTCTCCGACTCCAGCAGCTCCTCCGATAACCCCAGCAGCTCCTCCAGTACTAGCGACACCTGCAGCACCAGTCTCCATTCCAACCTCTCCCTCCAGACGCTGCCATCTGTCCCCTCCCTTCAGAAGCTCATCTCCCAACTCGACGCCCCAAACCTCTCCGTCTCTCACCTCTGCTTCACCACCCTCACTCCCACCCCCTCCTCCTCTCTCCCGATCACCTGCCTCGCCTTCCACCACAACCGCCTCTACGCCGCCTCCGGCCACGAAATCAACGTCTACGATCGGGCCGACTTCTCCCACCTCGACTCATTCAACGCTCACGATCCCTCCTCGGGCTCCGTGAAGTCCGTCTCTTTTTCCGACGGCAAGGTGTTCACCGCTCACCAGGACTGTAAAATCAAAGTCTGGGAGATAATCCCGAGTAAACGGCACAGACTCCTAACCACCCTCCCCACCGTCAACGACCGTTTGATTCGTTTTGCGCTCCCCAAGAACTACATCAGCATACGCCGGCACGTGAAACGCCTATGGATCCAGCACGCCGACGCCGTTACAGGCATCGCCGTCAACAACGGCCTCGTCTACTCGGTTTCCTGGGACAAGACCTTGAAGATTTGGCGGGACTCCAACCTCCGCTGCGTGGAGTCGGTCAAGGCGCACGAGGACGCCGTGAGCGCGGTGGCGGTGGCGAAGGACGGGACCGTCTACACCGGGTCGGCGGACCGTCGGATCCGGGTGTGGGCGAGACCGCAAGACGAGAAGCGGCACGTGTTGGTGGGGACGCTGGAGAAGCACAAGTCGGGGGTGAACGCTTTGGCTCTAAACGACGACGGATCGGTGCTGTTCTCGGGGGCCTGTGACCGTTCGATCCTGGTGTGGGATAGAGAGGACAGCGCGAACCACATGGCGGTTACGGGAGCGTTAAGGGGCCATGGTAAGGCGATACTGTGTTTATTCAACGTCGGGGATTTGCTGCTGAGTGGGTCCGCTGATCGGACGGTGAGGATGTGGCGGCGAGGGGAGGATGGCAGTTATTGCTGTTTGGGGGTTTTGGAGGGACACGTGAAACCGGTAAAGGCGCTGGTGGCGGTTGCGGGAGAGAGTGGCGGCGGCGTCGTTTCGGTTGTGAGTGGGAGTTTAGATGGAGTGGTGAAGGTGTGGCATGTGTCGGTTTCGGAGGCGATTAAAGAACAGAAGATGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

434

Amino Acids

47.13

Weight (kDa)

8.94

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	103 - 283	6.6e-14	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	207 - 283	2.4e-09	WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	211 - 327	9.3e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	211 - 280	7.5e-09	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	212 - 370	9e-12	WDHD1 first WD40 domain
NBCH_WD40	PF20426	219 - 281	7.8e-07	Neurobeachin beta propeller domain
WD40_Prp19	PF24814	221 - 306	2e-09	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	223 - 350	3.5e-08	Echinoderm microtubule-associated protein second beta-propeller
WDR55	PF24796	225 - 422	1.5e-09	WDR55
WD40_Gbeta	PF25391	229 - 370	8.6e-11	G protein beta WD-40 repeat protein
WD40_CDC20-Fz	PF24807	232 - 336	8.2e-11	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	241 - 423	6.6e-15	TEP-1 second beta-propeller
Beta-prop_WDR75_1st	PF23869	251 - 331	3.4e-06	WD repeat-containing protein 75 first beta-propeller
Beta-prop_EML	PF23409	252 - 329	1.5e-06	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	266 - 372	4.9e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	269 - 428	7.3e-24	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	285 - 429	2.6e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	289 - 427	5.9e-16	WDR3 first beta-propeller domain
WD40	PF00400	290 - 326	5.9e-08	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	294 - 373	7e-06	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	297 - 369	6.2e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	297 - 393	3.9e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24530
fragaria_vesca	FvH4_4g25271
malus_domestica	MD13G1105300.v1.1 MD16G1105400.v1.1
prunus_persica	Prupe.1G241300_v2.0.a1
pyrus_communis	pycom13g09130 pycom16g08970
rosa_chinensis	RchiOBHm_Chr4g0432531
rosa_laevigata	RLG00000006834
rosa_multiflora	Rmu_sc0009980.1_g000001
rosa_roxburghii	Rroxscaffold_5G00373980
rosa_rugosa	Rorug04G0260000.1
rosa_samantha	Rh4AG314800 Rh4BG322500 Rh4CG337700 Rh4DG318500
rosa_wichuraiana	Rw4G027370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	164, 323
AasI	GACNNNNNNGTC	1 cut(s)	797
Acc36I	ACCTGC	2 cut(s)	164, 323
AccBSI	CCGCTC	1 cut(s)	476
AccI	GTMKAC	3 cut(s)	372, 678, 801
AccII	CGCG	2 cut(s)	773, 992
AclWI	GGATC	7 cut(s)	413, 622, 635, 820, 833, 937, 958
AcoI	YGGCCR	1 cut(s)	355
AcuI	CTGAAG	1 cut(s)	200
AcvI	CACGTG	3 cut(s)	613, 865, 1159
AcyI	GRCGYC	4 cut(s)	240, 642, 762, 1209
AfaI	GTAC	1 cut(s)	145
AfiI	CCNNNNNNNGG	7 cut(s)	428, 736, 835, 973, 1003, 1033, 1089
AflIII	ACRYGT	3 cut(s)	91, 864, 1156
AgeI	ACCGGT	1 cut(s)	1165
AgsI	TTSAA	3 cut(s)	409, 706, 1054
AhdI	GACNNNNNGTC	1 cut(s)	95
AjiI	CACGTC	1 cut(s)	94
AjnI	CCWGG	3 cut(s)	480, 689, 966
AluBI	AGCT	4 cut(s)	7, 114, 135, 223
AluI	AGCT	4 cut(s)	7, 114, 135, 223
Alw26I	GTCTC	6 cut(s)	58, 103, 173, 262, 451, 835
AlwI	GGATC	7 cut(s)	413, 622, 635, 820, 833, 937, 958
AlwNI	CAGNNNCTG	1 cut(s)	196
Ama87I	CYCGRG	3 cut(s)	427, 514, 943
AoxI	GGCC	5 cut(s)	355, 381, 670, 948, 1024
ApeKI	GCWGC	6 cut(s)	111, 132, 159, 196, 732, 1069
ArsI	GACNNNNNNTTYG	4 cut(s)	36, 68, 354, 386
AsiGI	ACCGGT	1 cut(s)	1165
AspLEI	GCGC	5 cut(s)	580, 754, 773, 992, 1177
AspS9I	GGNCC	6 cut(s)	381, 795, 817, 948, 1024, 1080
AsuC2I	CCSGG	2 cut(s)	808, 830
AsuHPI	GGTGA	8 cut(s)	254, 265, 304, 463, 470, 913, 1108, 1258
AvaI	CYCGRG	3 cut(s)	427, 514, 943
AvaII	GGWCC	3 cut(s)	795, 817, 1080
BamHI	GGATCC	2 cut(s)	627, 825
BanII	GRGCYC	1 cut(s)	434
BauI	CACGAG	1 cut(s)	755
BbrPI	CACGTG	3 cut(s)	613, 865, 1159
BbvI	GCAGC	6 cut(s)	123, 144, 171, 183, 719, 1056
BccI	CCATC	4 cut(s)	65, 208, 1115, 1232
BceAI	ACGGC	6 cut(s)	475, 539, 629, 644, 685, 749
BciT130I	CCWGG	3 cut(s)	482, 691, 968
BcnI	CCSGG	2 cut(s)	808, 830
BcoDI	GTCTC	6 cut(s)	58, 103, 173, 262, 451, 835
BfaI	CTAG	1 cut(s)	147
BfmI	CTRYAG	1 cut(s)	157
BfoI	RGCGCY	1 cut(s)	1178
BfuAI	ACCTGC	2 cut(s)	164, 323
BmcAI	AGTACT	1 cut(s)	145
Bme1390I	CCNGG	5 cut(s)	482, 691, 808, 830, 968
Bme18I	GGWCC	3 cut(s)	795, 817, 1080
BmeRI	GACNNNNNGTC	1 cut(s)	95
BmeT110I	CYCGRG	3 cut(s)	427, 514, 943
BmgBI	CACGTC	1 cut(s)	94
BmgT120I	GGNCC	6 cut(s)	381, 795, 817, 948, 1024, 1080
BmiI	GGNNCC	7 cut(s)	433, 629, 796, 827, 949, 1025, 1081
BmrFI	CCNGG	5 cut(s)	482, 691, 808, 830, 968
BmsI	GCATC	1 cut(s)	663
BpmI	CTGGAG	4 cut(s)	91, 124, 173, 902
BpuMI	CCSGG	2 cut(s)	808, 830
BsaAI	YACGTR	3 cut(s)	613, 865, 1159
BsaHI	GRCGYC	4 cut(s)	240, 642, 762, 1209
BsaI	GGTCTC	1 cut(s)	835
BsaJI	CCNNGG	3 cut(s)	426, 690, 1027
BsaWI	WCCGGW	1 cut(s)	1165
BsaXI	ACNNNNNCTCC	8 cut(s)	83, 113, 268, 298, 335, 365, 407, 437
Bsc4I	CCNNNNNNNGG	7 cut(s)	428, 736, 835, 973, 1003, 1033, 1089
Bse118I	RCCGGY	2 cut(s)	606, 1165
Bse1I	ACTGG	2 cut(s)	141, 165
BseBI	CCWGG	3 cut(s)	482, 691, 968
BseDI	CCNNGG	3 cut(s)	426, 690, 1027
BseGI	GGATG	3 cut(s)	57, 1107, 1126
BseLI	CCNNNNNNNGG	7 cut(s)	428, 736, 835, 973, 1003, 1033, 1089
BseMII	CTCAG	1 cut(s)	1064
BseNI	ACTGG	2 cut(s)	141, 165
BseRI	GAGGAG	6 cut(s)	25, 106, 127, 286, 289, 415
BseXI	GCAGC	6 cut(s)	123, 144, 171, 183, 719, 1056
BseYI	CCCAGC	1 cut(s)	128
Bsh1236I	CGCG	2 cut(s)	773, 992
Bsh1285I	CGRYCG	3 cut(s)	14, 379, 562
BshFI	GGCC	5 cut(s)	357, 383, 672, 950, 1026
BshTI	ACCGGT	1 cut(s)	1165
BsiEI	CGRYCG	3 cut(s)	14, 379, 562
BsiHKCI	CYCGRG	3 cut(s)	427, 514, 943
BsiSI	CCGG	5 cut(s)	354, 607, 807, 829, 1166
BslFI	GGGAC	6 cut(s)	191, 707, 731, 808, 889, 1167
BslI	CCNNNNNNNGG	7 cut(s)	428, 736, 835, 973, 1003, 1033, 1089
BsmAI	GTCTC	6 cut(s)	58, 103, 173, 262, 451, 835
BsmBI	CGTCTC	4 cut(s)	58, 103, 262, 451
BsmFI	GGGAC	6 cut(s)	191, 707, 731, 808, 889, 1167
BsnI	GGCC	5 cut(s)	357, 383, 672, 950, 1026
Bso31I	GGTCTC	1 cut(s)	835
BsoBI	CYCGRG	3 cut(s)	427, 514, 943
Bsp1286I	GDGCHC	1 cut(s)	434
Bsp143I	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
Bsp19I	CCATGG	1 cut(s)	1027
BspANI	GGCC	5 cut(s)	357, 383, 672, 950, 1026
BspCNI	CTCAG	1 cut(s)	1065
BspFNI	CGCG	2 cut(s)	773, 992
BspLI	GGNNCC	7 cut(s)	433, 629, 796, 827, 949, 1025, 1081
BspMAI	CTGCAG	1 cut(s)	161
BspMI	ACCTGC	2 cut(s)	164, 323
BspPI	GGATC	7 cut(s)	413, 622, 635, 820, 833, 937, 958
BspTNI	GGTCTC	1 cut(s)	835
BsrBI	CCGCTC	1 cut(s)	476
BsrFI	RCCGGY	2 cut(s)	606, 1165
BsrI	ACTGG	2 cut(s)	141, 165
BssAI	RCCGGY	2 cut(s)	606, 1165
BssECI	CCNNGG	3 cut(s)	426, 690, 1027
BssMI	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
BssNI	GRCGYC	4 cut(s)	240, 642, 762, 1209
BssSI	CACGAG	1 cut(s)	755
BssT1I	CCWWGG	1 cut(s)	1027
Bst2BI	CACGAG	1 cut(s)	755
Bst2UI	CCWGG	3 cut(s)	482, 691, 968
Bst4CI	ACNGT	9 cut(s)	52, 488, 553, 563, 799, 821, 959, 1044, 1096
BstACI	GRCGYC	4 cut(s)	240, 642, 762, 1209
BstAPI	GCANNNNNTGC	1 cut(s)	1131
BstBAI	YACGTR	3 cut(s)	613, 865, 1159
BstC8I	GCNNGC	2 cut(s)	608, 636
BstDEI	CTNAG	1 cut(s)	1073
BstDSI	CCRYGG	1 cut(s)	1027
BstF5I	GGATG	3 cut(s)	57, 1107, 1126
BstFNI	CGCG	2 cut(s)	773, 992
BstH2I	RGCGCY	1 cut(s)	1178
BstHHI	GCGC	5 cut(s)	580, 754, 773, 992, 1177
BstKTI	GATC	9 cut(s)	14, 312, 379, 421, 630, 828, 932, 966, 1090
BstMAI	GTCTC	6 cut(s)	58, 103, 173, 262, 451, 835
BstMBI	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
BstMCI	CGRYCG	3 cut(s)	14, 379, 562
BstMWI	GCNNNNNNNGC	5 cut(s)	156, 770, 886, 1131, 1181
BstNI	CCWGG	3 cut(s)	482, 691, 968
BstNSI	RCATGY	2 cut(s)	33, 1262
BstSCI	CCNGG	5 cut(s)	480, 689, 806, 828, 966
BstSFI	CTRYAG	1 cut(s)	157
BstUI	CGCG	2 cut(s)	773, 992
BstV1I	GCAGC	6 cut(s)	123, 144, 171, 183, 719, 1056
BstX2I	RGATCY	2 cut(s)	627, 825
BstYI	RGATCY	2 cut(s)	627, 825
BsuRI	GGCC	5 cut(s)	357, 383, 672, 950, 1026
BtgI	CCRYGG	1 cut(s)	1027
BtgZI	GCGATG	1 cut(s)	640
BtrI	CACGTC	1 cut(s)	94
BtsCI	GGATG	3 cut(s)	57, 1107, 1126
BveI	ACCTGC	2 cut(s)	164, 323
Cac8I	GCNNGC	2 cut(s)	608, 636
CaiI	CAGNNNCTG	1 cut(s)	196
CfoI	GCGC	5 cut(s)	580, 754, 773, 992, 1177
Cfr10I	RCCGGY	2 cut(s)	606, 1165
Cfr13I	GGNCC	6 cut(s)	381, 795, 817, 948, 1024, 1080
CpoI	CGGWCCG	1 cut(s)	817
CseI	GACGC	6 cut(s)	202, 248, 650, 770, 886, 1198
Csp6I	GTAC	1 cut(s)	144
CspAI	ACCGGT	1 cut(s)	1165
CspI	CGGWCCG	1 cut(s)	817
CviAII	CATG	4 cut(s)	30, 1000, 1028, 1259
CviQI	GTAC	1 cut(s)	144
DdeI	CTNAG	1 cut(s)	1073
DpnI	GATC	9 cut(s)	13, 311, 378, 420, 629, 827, 931, 965, 1089
DpnII	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
DrdI	GACNNNNNNGTC	1 cut(s)	797
DriI	GACNNNNNGTC	1 cut(s)	95
DseDI	GACNNNNNNGTC	1 cut(s)	797
EaeI	YGGCCR	1 cut(s)	355
Eam1105I	GACNNNNNGTC	1 cut(s)	95
EciI	GGCGGA	2 cut(s)	13, 830
Eco130I	CCWWGG	1 cut(s)	1027
Eco24I	GRGCYC	1 cut(s)	434
Eco31I	GGTCTC	1 cut(s)	835
Eco47I	GGWCC	3 cut(s)	795, 817, 1080
Eco57I	CTGAAG	1 cut(s)	200
Eco72I	CACGTG	3 cut(s)	613, 865, 1159
Eco88I	CYCGRG	3 cut(s)	427, 514, 943
EcoO109I	RGGNCCY	1 cut(s)	948
EcoRII	CCWGG	3 cut(s)	480, 689, 966
EcoT14I	CCWWGG	1 cut(s)	1027
EcoT38I	GRGCYC	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	1027
Esp3I	CGTCTC	4 cut(s)	58, 103, 262, 451
FaeI	CATG	4 cut(s)	33, 1003, 1031, 1262
FaiI	YATR	7 cut(s)	31, 79, 602, 625, 1001, 1029, 1260
FaqI	GGGAC	6 cut(s)	191, 707, 731, 808, 889, 1167
FatI	CATG	4 cut(s)	29, 999, 1027, 1258
FauI	CCCGC	2 cut(s)	708, 1183
FblI	GTMKAC	3 cut(s)	372, 678, 801
FokI	GGATG	3 cut(s)	44, 1114, 1133
FriOI	GRGCYC	1 cut(s)	434
FspBI	CTAG	1 cut(s)	147
GlaI	GCGC	5 cut(s)	579, 753, 772, 991, 1176
GsaI	CCCAGC	1 cut(s)	132
GsuI	CTGGAG	4 cut(s)	91, 124, 173, 902
HaeII	RGCGCY	1 cut(s)	1178
HaeIII	GGCC	5 cut(s)	357, 383, 672, 950, 1026
HapII	CCGG	5 cut(s)	354, 607, 807, 829, 1166
HgaI	GACGC	6 cut(s)	202, 248, 650, 770, 886, 1198
HhaI	GCGC	5 cut(s)	580, 754, 773, 992, 1177
Hin1I	GRCGYC	4 cut(s)	240, 642, 762, 1209
Hin1II	CATG	4 cut(s)	33, 1003, 1031, 1262
Hin6I	GCGC	5 cut(s)	578, 752, 771, 990, 1175
HinP1I	GCGC	5 cut(s)	578, 752, 771, 990, 1175
HincII	GTYRAC	2 cut(s)	556, 664
HindII	GTYRAC	2 cut(s)	556, 664
HinfI	GANTC	7 cut(s)	44, 104, 401, 531, 568, 719, 740
HpaII	CCGG	5 cut(s)	354, 607, 807, 829, 1166
HphI	GGTGA	8 cut(s)	254, 265, 304, 463, 470, 913, 1108, 1258
Hpy166II	GTNNAC	8 cut(s)	373, 471, 521, 556, 664, 679, 802, 904
Hpy188I	TCNGA	8 cut(s)	11, 103, 121, 219, 457, 825, 1092, 1273
Hpy188III	TCNNGA	4 cut(s)	190, 307, 416, 514
Hpy8I	GTNNAC	8 cut(s)	373, 471, 521, 556, 664, 679, 802, 904
Hpy99I	CGWCG	9 cut(s)	98, 242, 461, 644, 825, 926, 929, 1061, 1214
HpyAV	CCTTC	4 cut(s)	224, 334, 781, 1243
HpyCH4III	ACNGT	9 cut(s)	52, 488, 553, 563, 799, 821, 959, 1044, 1096
HpyCH4IV	ACGT	6 cut(s)	93, 369, 612, 864, 1056, 1158
HpyCH4V	TGCA	1 cut(s)	159
HpyF10VI	GCNNNNNNNGC	5 cut(s)	156, 770, 886, 1131, 1181
HpyF3I	CTNAG	1 cut(s)	1073
HpySE526I	ACGT	6 cut(s)	93, 369, 612, 864, 1056, 1158
Hsp92I	GRCGYC	4 cut(s)	240, 642, 762, 1209
Hsp92II	CATG	4 cut(s)	33, 1003, 1031, 1262
HspAI	GCGC	5 cut(s)	578, 752, 771, 990, 1175
KroI	GCCGGC	1 cut(s)	606
KroNI	GCCGGC	1 cut(s)	608
Kzo9I	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
LmnI	GCTCC	7 cut(s)	12, 38, 119, 140, 437, 585, 1013
Lsp1109I	GCAGC	6 cut(s)	123, 144, 171, 183, 719, 1056
LweI	GCATC	1 cut(s)	663
MaeI	CTAG	1 cut(s)	147
MaeII	ACGT	6 cut(s)	93, 369, 612, 864, 1056, 1158
MaeIII	GTNAC	3 cut(s)	646, 953, 1006
MalI	GATC	9 cut(s)	13, 311, 378, 420, 629, 827, 931, 965, 1089
MbiI	CCGCTC	1 cut(s)	476
MboI	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
MboII	GAAGA	1 cut(s)	718
MflI	RGATCY	2 cut(s)	627, 825
MhlI	GDGCHC	1 cut(s)	434
MlyI	GAGTC	5 cut(s)	98, 395, 525, 713, 749
MmeI	TCCRAC	5 cut(s)	126, 201, 480, 747, 803
MroNI	GCCGGC	1 cut(s)	606
MseI	TTAA	2 cut(s)	1019, 1281
MspA1I	CMGCKG	2 cut(s)	732, 1085
MspI	CCGG	5 cut(s)	354, 607, 807, 829, 1166
MspR9I	CCNGG	5 cut(s)	482, 691, 808, 830, 968
MvaI	CCWGG	3 cut(s)	482, 691, 968
MvnI	CGCG	2 cut(s)	773, 992
MwoI	GCNNNNNNNGC	5 cut(s)	156, 770, 886, 1131, 1181
NaeI	GCCGGC	1 cut(s)	608
NciI	CCSGG	2 cut(s)	808, 830
NcoI	CCATGG	1 cut(s)	1027
NdeII	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
NgoMIV	GCCGGC	1 cut(s)	606
NlaIII	CATG	4 cut(s)	33, 1003, 1031, 1262
NlaIV	GGNNCC	7 cut(s)	433, 629, 796, 827, 949, 1025, 1081
NmuCI	GTSAC	1 cut(s)	953
NspI	RCATGY	2 cut(s)	33, 1262
PaqCI	CACCTGC	2 cut(s)	164, 323
PcsI	WCGNNNNNNNCGW	6 cut(s)	48, 99, 366, 381, 642, 762
PdiI	GCCGGC	1 cut(s)	608
PfeI	GAWTC	2 cut(s)	44, 568
PinAI	ACCGGT	1 cut(s)	1165
Ple19I	CGATCG	2 cut(s)	14, 379
PleI	GAGTC	5 cut(s)	98, 395, 525, 713, 748
PmaCI	CACGTG	3 cut(s)	613, 865, 1159
PmlI	CACGTG	3 cut(s)	613, 865, 1159
PpsI	GAGTC	5 cut(s)	98, 395, 525, 713, 748
Ppu21I	YACGTR	3 cut(s)	613, 865, 1159
Psp6I	CCWGG	3 cut(s)	480, 689, 966
PspCI	CACGTG	3 cut(s)	613, 865, 1159
PspFI	CCCAGC	1 cut(s)	128
PspGI	CCWGG	3 cut(s)	480, 689, 966
PspN4I	GGNNCC	7 cut(s)	433, 629, 796, 827, 949, 1025, 1081
PspPI	GGNCC	6 cut(s)	381, 795, 817, 948, 1024, 1080
PstI	CTGCAG	1 cut(s)	161
PstNI	CAGNNNCTG	1 cut(s)	196
PsuI	RGATCY	2 cut(s)	627, 825
PvuI	CGATCG	2 cut(s)	14, 379
RsaI	GTAC	1 cut(s)	145
RsaNI	GTAC	1 cut(s)	144
Rsr2I	CGGWCCG	1 cut(s)	817
RsrII	CGGWCCG	1 cut(s)	817
SaqAI	TTAA	2 cut(s)	1019, 1281
Sau3AI	GATC	9 cut(s)	11, 309, 376, 418, 627, 825, 929, 963, 1087
Sau96I	GGNCC	6 cut(s)	381, 795, 817, 948, 1024, 1080
ScaI	AGTACT	1 cut(s)	145
SchI	GAGTC	5 cut(s)	98, 395, 525, 713, 749
ScrFI	CCNGG	5 cut(s)	482, 691, 808, 830, 968
SduI	GDGCHC	1 cut(s)	434
SfaNI	GCATC	1 cut(s)	663
SfcI	CTRYAG	1 cut(s)	157
SinI	GGWCC	3 cut(s)	795, 817, 1080
SspMI	CTAG	1 cut(s)	147
StyD4I	CCNGG	5 cut(s)	480, 689, 806, 828, 966
StyI	CCWWGG	1 cut(s)	1027
TaaI	ACNGT	9 cut(s)	52, 488, 553, 563, 799, 821, 959, 1044, 1096
TaiI	ACGT	6 cut(s)	96, 372, 615, 867, 1059, 1161
TaqI	TCGA	3 cut(s)	237, 399, 962
TaqII	GACCGA	1 cut(s)	733
TatI	WGTACW	1 cut(s)	143
TauI	GCSGC	5 cut(s)	350, 862, 1111, 1206, 1209
TfiI	GAWTC	2 cut(s)	44, 568
Tru1I	TTAA	2 cut(s)	1019, 1281
Tru9I	TTAA	2 cut(s)	1019, 1281
TseFI	GTSAC	1 cut(s)	953
TseI	GCWGC	6 cut(s)	111, 132, 159, 196, 732, 1069
Tsp45I	GTSAC	1 cut(s)	953
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	4 cut(s)	244, 424, 433, 942
VpaK11BI	GGWCC	3 cut(s)	795, 817, 1080
XceI	RCATGY	2 cut(s)	33, 1262
XmiI	GTMKAC	3 cut(s)	372, 678, 801
XspI	CTAG	1 cut(s)	147
ZrmI	AGTACT	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.