Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0014721

Physical Location & Seq

Genomic Coordinates Forward (+)

27204100 .. 27208641

Gene Structure 4542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25430.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGTTGGGTGAGGAAGAGAAGAGCGGGCTGGCCGGAAATGCTACCCGGAAAAGCTATCTCCGGTCGATGTCATGGAGTGACCGTTCACCTTCCAAGGCTAATAATCCTTATCCAAAGCCGCAGCTGAATAATAAAGCAAGGTCTTGCTTACCTCCACTGCAGCCTCTTTCAATTGCCAAGTGTAGTGTTAAGGAGTGGCCTAAGGCAGGTTCTGATGATCTTGGTGTCTGGCCTCAGCCCCAAACTCCTAGAGGGTCTGCTGCTAAAGCGTTTCCGGGTTCGAATTCGGAACAGGGTGGGAGAGAGTTTGAGTTTAAGAAAGATAAGCTTGCTTTTTTTGATAAGGAGTGCTCTAGGATTGCGGAGCATATATACTTGGGGAGTGATGCTGTGGCTAAGAACCGGGAGGTTTTGAGGAAGAATGGGATCACACATGTGCTTAACTGTGTAGGGTTTGTGTCTCCTGAGTATTTCAAGAATGATCTTGTGTACAAGACTCTCTGGTTGAAGGATAGCCCCTCGGAGGACATTACAAGCATTTTGTATGATGTGTTTGATTATTTTGAAGATGTGAGGAAGCAGAATGGGAGGGTTTTTGTGCATTGTTGTCAGGGAGTGTCGCGGTCGACCTCTTTGGTGATTGCATACCTTATGTGGAGGGAGGGCCAGAGCTTTCAAGATGCATTTCAGTATGTCAAGGCTGCAAGAGGGGTGACTAACCCCAATATGGGGTTTGCTTGTCAACTTCTGCAGTGCCAGAAGCGGGTTCATGCTGTGCCTGCAAGCCCGAGTTCCGTGTTAAGGATGTACAGGATGGCCCCGCATTCGTCGTATGATCCTCTTCATCTGGTGCCGAAGATGTTAAACCATCCAGGTGCACAAGGACTCGACTCTCGTGGTGCTTTTGTTGTCCATGTTCCATCTGCTATATATGTGTGGATTGGAAAGGATTGCAACACAAAGATGTCAGATAATGCAAGAGCAGCTGCCCTTCAAGTCATCCAGTATGAGAGGGCAAAAGGTCCAATCGTGGATATCAACGAAGGCAAGGAGCCATTAGAATTTTGGGATGCTATTTCCAGCGGGCTTTCAGAAGAGGATTGCAGCAAGGGAGATGTCAAAAAGGATGGAACTTTTTCTTCTGGAGGCGATAAGGTTGCTGCAGTGACTTGTATTCCAGTGGGTGAAAGGAAGGTTGGTGACTATGATTTGGATTTCGAAATTTTCCAAAAGGCACTTGCTGGTGGGGTTGTTCCACCATTTTCAGTATCAAATACTGAGTCTGAAACTTGCCTTCCTGCTAGAGAAAATGGATGGGGCAGATTGCGGCAAAAGTTTGCTAGCGGAATTATGAAGGATTTGGTCACATCTTCTGAGGTGAACTGTGGCTCTACCCTGTCCAGTGATGGACCTGATATGGTTGTGGAAGCTAACAAGGAAGCAGAAAACCCTGTTTCTTTGATTGAGCCTTCATCACCATTGTCAGCGTCAAGCCACTTTTGTGGTTCACCAGATTCCTTTGAATGTTTTCCAATTAGTAGCCCAGATAAGATAAGAGATACTTTTAGGGAAGTAGGACGCTCTGTTGCTCTTACCAATCCATTATCATTTCCAACAGCTGACTGTGGGTCACCAGATTCTTGTTCTTGGTTTCCTGATAATAATCTTAAGTTTAGCTCAAAATCCCCAACACTCTCCCCTTCAACCTCTGAATACTCTAGTTCATCATTTACATTTTCACCCTCATCTTCTAATTGGTCGGACTTGTCATGCTTGTCTTCTCAACAGCCTTCACCTTCAGGCTTGGATTCTGCAGATCCATTATGTATTAAGCATAGTTCCTTAGCTGACAGCTCACGGTTACTTTTCAAAGAATCTGTCTCTTCACCTAGAGAGGCATTTTCAGCTAATTGCACTTTGCAAGTGACAAATACATGTTTGACATGTAAAGGGATTTCCCCTTCTATTGCAGAACGTAGAGGGAGTAAACCTCCACCTCTAATGTTACCCTCAGTTGAGGAATCACCTAAAGTTTCGAGGAATTTGGTACGATCATGGTCGTTTTCTTTACCTGACTTGGATGATGATCTGATGGACACTGATTGCAACCAAACCGAAAATGTGAGCAACAGAGAAGAGCTAATGTTGGATGTTGACATTATCAACCCTGAAAGTGAATTACAATCTGAAACGACCGGGGAAGCTGCAGAGGTGATTAACCCCGTTTTGTACCAGTGGCCTTCTTTGAATAAAGTGGTGATGCACCAGTCTGGCAAACTTCATTCTAGATCAGCATATCTTTTGCTAGCTCCAGATGCGACTGTGGGTGCAAATAAACCTGGTGTATTATTTGTCTGGTTGGGACGTGGTATTTTGCATGAGAAAGGGCAAAATGCAACATTTCAGGATAGCCATCTTCACTGGGAAACCATAGGACACTGCTTCCTTGAGCATATGGGTTTACCTACGAGTGCCCCTGTACAGATAGTAAGAGAAGGGGAGGAGCCAGAAGAGTTCCTGATCCATCTCAGCTGTAAATCAATACAGAACACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000188 GO:0001704 GO:0001706 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006469 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007369 GO:0007492 GO:0008150 GO:0008152 GO:0008330 GO:0009653 GO:0009790 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010563 GO:0010605 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033549 GO:0033673 GO:0035335 GO:0035970 GO:0036211 GO:0042325 GO:0042326 GO:0042578 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043407 GO:0043408 GO:0043409 GO:0043412 GO:0043549 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0060255 GO:0065007 GO:0065009 GO:0070372 GO:0070373 GO:0071704 GO:0071900 GO:0071901 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902532 GO:1990439

KEGG Pathways

Metabolic & Signaling

ko04010 ko04726 ko05418 map04010 map04726 map05418

Pfam Domains

Protein Families

DSPc Gelsolin

Protein Analysis

852

Amino Acids

93.29

Weight (kDa)

5.58

Isoelectric Point (pI)

55.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	124 - 254	4.9e-28	Dual specificity phosphatase, catalytic domain
MPK1_gelsolin_C	PF25466	745 - 829	1.6e-20	MPK1 gelsolin domain C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014721)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25430 FvH4_4g25430
malus_domestica	MD13G1103000.v1.1 MD16G1103200.v1.1
prunus_persica	Prupe.1G242800_v2.0.a1
pyrus_communis	pycom16g08800
rosa_chinensis	RchiOBHm_Chr4g0432741
rosa_laevigata	RLG00000006816
rosa_multiflora	Rmu_co8494851.1_g000001 Rmu_sc0012180.1_g000009
rosa_roxburghii	Rroxscaffold_5G00374200
rosa_rugosa	Rorug04G0262100
rosa_samantha	Rh4AG316600 Rh4BG324700 Rh4CG339700 Rh4DG319900
rosa_wichuraiana	Rw4G027540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	197
AccB1I	GGYRCC	1 cut(s)	850
AccBSI	CCGCTC	1 cut(s)	24
AccI	GTMKAC	1 cut(s)	626
AccII	CGCG	1 cut(s)	622
AciI	CCGC	9 cut(s)	24, 119, 362, 622, 763, 821, 1083, 1327, 1344
AclWI	GGATC	4 cut(s)	434, 830, 1811, 2515
AcoI	YGGCCR	1 cut(s)	30
AcsI	RAATTY	4 cut(s)	283, 1061, 1221, 2041
AcuI	CTGAAG	1 cut(s)	1782
AfaI	GTAC	5 cut(s)	491, 809, 2049, 2231, 2481
AfiI	CCNNNNNNNGG	7 cut(s)	206, 523, 727, 728, 729, 763, 801
AflII	CTTAAG	1 cut(s)	1667
AflIII	ACRYGT	3 cut(s)	433, 1934, 1943
AhdI	GACNNNNNGTC	1 cut(s)	1627
AjiI	CACGTC	1 cut(s)	2366
AjnI	CCWGG	2 cut(s)	871, 2338
AjuI	GAANNNNNNNTTGG	2 cut(s)	1179, 1211
AleI	CACNNNNGTG	2 cut(s)	434, 1500
AloI	GAACNNNNNNTCC	2 cut(s)	67, 99
Alw21I	GWGCWC	2 cut(s)	353, 880
Alw26I	GTCTC	2 cut(s)	465, 1885
Alw44I	GTGCAC	1 cut(s)	876
AlwI	GGATC	4 cut(s)	434, 830, 1811, 2515
AlwNI	CAGNNNCTG	1 cut(s)	212
Ama87I	CYCGRG	1 cut(s)	787
AoxI	GGCC	6 cut(s)	30, 197, 230, 664, 816, 2237
ApaLI	GTGCAC	1 cut(s)	876
ApeKI	GCWGC	9 cut(s)	121, 160, 260, 701, 983, 986, 1104, 1160, 2204
ApoI	RAATTY	4 cut(s)	283, 1061, 1221, 2041
ArsI	GACNNNNNNTTYG	4 cut(s)	1265, 1297, 1863, 1895
Asp700I	GAANNNNTTC	2 cut(s)	1135, 1527
AspS9I	GGNCC	4 cut(s)	664, 817, 1022, 1409
AsuC2I	CCSGG	4 cut(s)	46, 276, 404, 2197
AsuII	TTCGAA	2 cut(s)	281, 1218
AsuNHI	GCTAGC	2 cut(s)	1340, 2305
AvaI	CYCGRG	1 cut(s)	787
AvaII	GGWCC	2 cut(s)	1022, 1409
AxyI	CCTNAGG	1 cut(s)	201
BaeGI	GKGCMC	2 cut(s)	880, 2476
BanI	GGYRCC	1 cut(s)	850
BauI	CACGAG	1 cut(s)	894
BbsI	GAAGAC	1 cut(s)	1770
Bbv12I	GWGCWC	2 cut(s)	353, 880
BbvCI	CCTCAGC	1 cut(s)	234
BbvI	GCAGC	9 cut(s)	133, 172, 247, 688, 973, 995, 1116, 1147, 2191
BccI	CCATC	9 cut(s)	808, 876, 928, 1121, 1308, 1400, 2086, 2421, 2532
BcgI	CGANNNNNNTGC	2 cut(s)	1139, 1173
BciT130I	CCWGG	2 cut(s)	873, 2340
BcnI	CCSGG	4 cut(s)	46, 276, 404, 2197
BcoDI	GTCTC	2 cut(s)	465, 1885
BfaI	CTAG	8 cut(s)	249, 354, 1302, 1341, 1719, 1890, 2286, 2306
BfmI	CTRYAG	5 cut(s)	158, 749, 1161, 1812, 2205
BfrI	CTTAAG	1 cut(s)	1667
BfuAI	ACCTGC	1 cut(s)	197
Bme1390I	CCNGG	6 cut(s)	46, 276, 404, 873, 2197, 2340
Bme18I	GGWCC	2 cut(s)	1022, 1409
BmeRI	GACNNNNNGTC	1 cut(s)	1627
BmeT110I	CYCGRG	1 cut(s)	787
BmgBI	CACGTC	1 cut(s)	2366
BmgT120I	GGNCC	4 cut(s)	664, 817, 1022, 1409
BmiI	GGNNCC	4 cut(s)	819, 852, 1053, 2505
BmrFI	CCNGG	6 cut(s)	46, 276, 404, 873, 2197, 2340
BmrI	ACTGGG	1 cut(s)	2431
BmsI	GCATC	5 cut(s)	376, 670, 1060, 2250, 2305
BmtI	GCTAGC	2 cut(s)	1344, 2309
BmuI	ACTGGG	1 cut(s)	2431
BpiI	GAAGAC	1 cut(s)	1770
BplI	GAGNNNNNCTC	2 cut(s)	1975, 2007
BpmI	CTGGAG	2 cut(s)	1164, 2295
Bpu10I	CCTNAGC	2 cut(s)	234, 1843
Bpu14I	TTCGAA	2 cut(s)	281, 1218
BpuEI	CTTGAG	1 cut(s)	2468
BpuMI	CCSGG	4 cut(s)	46, 276, 404, 2197
BsaBI	GATNNNNATC	3 cut(s)	1662, 2085, 2412
BsaJI	CCNNGG	3 cut(s)	93, 519, 2196
BsaWI	WCCGGW	1 cut(s)	60
BsaXI	ACNNNNNCTCC	2 cut(s)	67, 97
Bsc4I	CCNNNNNNNGG	7 cut(s)	206, 523, 727, 728, 729, 763, 801
Bse1I	ACTGG	6 cut(s)	1003, 1178, 1401, 2233, 2266, 2426
Bse21I	CCTNAGG	1 cut(s)	201
Bse8I	GATNNNNATC	3 cut(s)	1662, 2085, 2412
BseBI	CCWGG	2 cut(s)	873, 2340
BseDI	CCNNGG	3 cut(s)	93, 519, 2196
BseGI	GGATG	9 cut(s)	810, 819, 868, 999, 1075, 1132, 1319, 2086, 2155
BseJI	GATNNNNATC	3 cut(s)	1662, 2085, 2412
BseLI	CCNNNNNNNGG	7 cut(s)	206, 523, 727, 728, 729, 763, 801
BseMII	CTCAG	6 cut(s)	248, 456, 1269, 1365, 2025, 2542
BseNI	ACTGG	6 cut(s)	1003, 1178, 1401, 2233, 2266, 2426
BseRI	GAGGAG	1 cut(s)	2516
BseSI	GKGCMC	2 cut(s)	880, 2476
BseXI	GCAGC	9 cut(s)	133, 172, 247, 688, 973, 995, 1116, 1147, 2191
Bsh1236I	CGCG	1 cut(s)	622
Bsh1285I	CGRYCG	3 cut(s)	65, 626, 2196
BshFI	GGCC	6 cut(s)	32, 199, 232, 666, 818, 2239
BshNI	GGYRCC	1 cut(s)	850
BsiEI	CGRYCG	3 cut(s)	65, 626, 2196
BsiHKAI	GWGCWC	2 cut(s)	353, 880
BsiHKCI	CYCGRG	1 cut(s)	787
BsiSI	CCGG	6 cut(s)	33, 46, 61, 275, 403, 2196
BslFI	GGGAC	1 cut(s)	2376
BslI	CCNNNNNNNGG	7 cut(s)	206, 523, 727, 728, 729, 763, 801
BsmAI	GTCTC	2 cut(s)	465, 1885
BsmFI	GGGAC	1 cut(s)	2376
BsmI	GAATGC	1 cut(s)	823
BsnI	GGCC	6 cut(s)	32, 199, 232, 666, 818, 2239
BsoBI	CYCGRG	1 cut(s)	787
Bsp119I	TTCGAA	2 cut(s)	281, 1218
Bsp1286I	GDGCHC	3 cut(s)	353, 880, 2476
Bsp1407I	TGTACA	3 cut(s)	489, 807, 2479
Bsp143I	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
BspACI	CCGC	9 cut(s)	24, 119, 362, 622, 763, 821, 1083, 1327, 1344
BspANI	GGCC	6 cut(s)	32, 199, 232, 666, 818, 2239
BspCNI	CTCAG	6 cut(s)	247, 457, 1270, 1366, 2024, 2541
BspFNI	CGCG	1 cut(s)	622
BspLI	GGNNCC	4 cut(s)	819, 852, 1053, 2505
BspMAI	CTGCAG	5 cut(s)	162, 753, 1165, 1816, 2209
BspMI	ACCTGC	1 cut(s)	197
BspOI	GCTAGC	2 cut(s)	1344, 2309
BspPI	GGATC	4 cut(s)	434, 830, 1811, 2515
BspQI	GCTCTTC	2 cut(s)	14, 2130
BspT104I	TTCGAA	2 cut(s)	281, 1218
BspT107I	GGYRCC	1 cut(s)	850
BspTI	CTTAAG	1 cut(s)	1667
BsrBI	CCGCTC	1 cut(s)	24
BsrGI	TGTACA	3 cut(s)	489, 807, 2479
BsrI	ACTGG	6 cut(s)	1003, 1178, 1401, 2233, 2266, 2426
BssECI	CCNNGG	3 cut(s)	93, 519, 2196
BssMI	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
BssSI	CACGAG	1 cut(s)	894
BssT1I	CCWWGG	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	894
Bst2UI	CCWGG	2 cut(s)	873, 2340
Bst4CI	ACNGT	6 cut(s)	83, 446, 1385, 1625, 1860, 2323
Bst6I	CTCTTC	7 cut(s)	9, 14, 846, 1089, 1888, 2130, 2505
BstAFI	CTTAAG	1 cut(s)	1667
BstAUI	TGTACA	3 cut(s)	489, 807, 2479
BstBI	TTCGAA	2 cut(s)	281, 1218
BstC8I	GCNNGC	8 cut(s)	26, 30, 330, 780, 784, 1085, 1342, 2307
BstDEI	CTNAG	9 cut(s)	201, 234, 396, 465, 1278, 1374, 1843, 2011, 2528
BstEII	GGTNACC	1 cut(s)	1629
BstENI	CCTNNNNNAGG	1 cut(s)	204
BstF5I	GGATG	9 cut(s)	810, 819, 868, 999, 1075, 1132, 1319, 2086, 2155
BstFNI	CGCG	1 cut(s)	622
BstKTI	GATC	9 cut(s)	220, 429, 484, 838, 1819, 2054, 2089, 2291, 2523
BstMAI	GTCTC	2 cut(s)	465, 1885
BstMBI	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
BstMCI	CGRYCG	3 cut(s)	65, 626, 2196
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 266, 779, 983, 1904, 2315
BstNI	CCWGG	2 cut(s)	873, 2340
BstNSI	RCATGY	3 cut(s)	437, 1938, 1947
BstPI	GGTNACC	1 cut(s)	1629
BstSCI	CCNGG	6 cut(s)	44, 274, 402, 871, 2195, 2338
BstSFI	CTRYAG	5 cut(s)	158, 749, 1161, 1812, 2205
BstSLI	GKGCMC	2 cut(s)	880, 2476
BstUI	CGCG	1 cut(s)	622
BstV1I	GCAGC	9 cut(s)	133, 172, 247, 688, 973, 995, 1116, 1147, 2191
BstV2I	GAAGAC	1 cut(s)	1770
BstX2I	RGATCY	1 cut(s)	1816
BstXI	CCANNNNNNTGG	1 cut(s)	1502
BstYI	RGATCY	1 cut(s)	1816
Bsu36I	CCTNAGG	1 cut(s)	201
BsuRI	GGCC	6 cut(s)	32, 199, 232, 666, 818, 2239
BtrI	CACGTC	1 cut(s)	2366
BtsCI	GGATG	9 cut(s)	810, 819, 868, 999, 1075, 1132, 1319, 2086, 2155
BtsI	GCAGTG	4 cut(s)	155, 758, 1170, 2437
BtsIMutI	CAGTG	9 cut(s)	155, 758, 1170, 1185, 1408, 2097, 2240, 2419, 2437
BveI	ACCTGC	1 cut(s)	197
Cac8I	GCNNGC	8 cut(s)	26, 30, 330, 780, 784, 1085, 1342, 2307
CaiI	CAGNNNCTG	1 cut(s)	212
Cfr13I	GGNCC	4 cut(s)	664, 817, 1022, 1409
CseI	GACGC	2 cut(s)	1476, 1587
CsiI	ACCWGGT	1 cut(s)	2338
Csp6I	GTAC	5 cut(s)	490, 808, 2048, 2230, 2480
CviAII	CATG	9 cut(s)	72, 434, 770, 914, 1770, 1935, 1944, 2055, 2378
CviQI	GTAC	5 cut(s)	490, 808, 2048, 2230, 2480
DdeI	CTNAG	9 cut(s)	201, 234, 396, 465, 1278, 1374, 1843, 2011, 2528
DpnI	GATC	9 cut(s)	219, 428, 483, 837, 1818, 2053, 2088, 2290, 2522
DpnII	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
DriI	GACNNNNNGTC	1 cut(s)	1627
EaeI	YGGCCR	1 cut(s)	30
Eam1104I	CTCTTC	7 cut(s)	9, 14, 846, 1089, 1888, 2130, 2505
Eam1105I	GACNNNNNGTC	1 cut(s)	1627
EarI	CTCTTC	7 cut(s)	9, 14, 846, 1089, 1888, 2130, 2505
Eco130I	CCWWGG	1 cut(s)	93
Eco32I	GATATC	1 cut(s)	1036
Eco47I	GGWCC	2 cut(s)	1022, 1409
Eco57I	CTGAAG	1 cut(s)	1782
Eco81I	CCTNAGG	1 cut(s)	201
Eco88I	CYCGRG	1 cut(s)	787
Eco91I	GGTNACC	1 cut(s)	1629
EcoNI	CCTNNNNNAGG	1 cut(s)	204
EcoO65I	GGTNACC	1 cut(s)	1629
EcoRI	GAATTC	1 cut(s)	283
EcoRII	CCWGG	2 cut(s)	871, 2338
EcoRV	GATATC	1 cut(s)	1036
EcoT14I	CCWWGG	1 cut(s)	93
EcoT22I	ATGCAT	1 cut(s)	685
ErhI	CCWWGG	1 cut(s)	93
FaeI	CATG	9 cut(s)	75, 437, 773, 917, 1773, 1938, 1947, 2058, 2381
FalI	AAGNNNNNCTT	4 cut(s)	312, 344, 1546, 1578
FaqI	GGGAC	1 cut(s)	2376
FatI	CATG	9 cut(s)	71, 433, 769, 913, 1769, 1934, 1943, 2054, 2377
FauI	CCCGC	4 cut(s)	17, 756, 828, 1076
FauNDI	CATATG	1 cut(s)	2454
FblI	GTMKAC	1 cut(s)	626
FokI	GGATG	9 cut(s)	817, 826, 855, 986, 1082, 1139, 1326, 2093, 2162
FspBI	CTAG	8 cut(s)	249, 354, 1302, 1341, 1719, 1890, 2286, 2306
GsuI	CTGGAG	2 cut(s)	1164, 2295
HaeIII	GGCC	6 cut(s)	32, 199, 232, 666, 818, 2239
HapII	CCGG	6 cut(s)	33, 46, 61, 275, 403, 2196
HgaI	GACGC	2 cut(s)	1476, 1587
Hin1II	CATG	9 cut(s)	75, 437, 773, 917, 1773, 1938, 1947, 2058, 2381
HincII	GTYRAC	3 cut(s)	627, 743, 2155
HindII	GTYRAC	3 cut(s)	627, 743, 2155
HindIII	AAGCTT	1 cut(s)	326
HinfI	GANTC	9 cut(s)	496, 885, 890, 1280, 1514, 1637, 1808, 1874, 2021
HpaII	CCGG	6 cut(s)	33, 46, 61, 275, 403, 2196
Hpy188III	TCNNGA	9 cut(s)	464, 475, 677, 1143, 1655, 2286, 2312, 2405, 2518
Hpy99I	CGWCG	1 cut(s)	832
HpyCH4III	ACNGT	6 cut(s)	83, 446, 1385, 1625, 1860, 2323
HpyCH4IV	ACGT	2 cut(s)	1975, 2365
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 266, 779, 983, 1904, 2315
HpyF3I	CTNAG	9 cut(s)	201, 234, 396, 465, 1278, 1374, 1843, 2011, 2528
HpySE526I	ACGT	2 cut(s)	1975, 2365
Hsp92II	CATG	9 cut(s)	75, 437, 773, 917, 1773, 1938, 1947, 2058, 2381
Kzo9I	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
LguI	GCTCTTC	2 cut(s)	14, 2130
LmnI	GCTCC	4 cut(s)	364, 1051, 2314, 2503
Lsp1109I	GCAGC	9 cut(s)	133, 172, 247, 688, 973, 995, 1116, 1147, 2191
LweI	GCATC	5 cut(s)	376, 670, 1060, 2250, 2305
MabI	ACCWGGT	1 cut(s)	2338
MaeI	CTAG	8 cut(s)	249, 354, 1302, 1341, 1719, 1890, 2286, 2306
MaeII	ACGT	2 cut(s)	1975, 2365
MaeIII	GTNAC	9 cut(s)	77, 712, 1165, 1199, 1363, 1629, 1860, 1924, 2004
MalI	GATC	9 cut(s)	219, 428, 483, 837, 1818, 2053, 2088, 2290, 2522
MbiI	CCGCTC	1 cut(s)	24
MboI	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
MfeI	CAATTG	1 cut(s)	171
MflI	RGATCY	1 cut(s)	1816
MhlI	GDGCHC	3 cut(s)	353, 880, 2476
MlyI	GAGTC	4 cut(s)	490, 879, 884, 1289
MmeI	TCCRAC	3 cut(s)	1637, 1740, 2127
Mph1103I	ATGCAT	1 cut(s)	685
MroXI	GAANNNNTTC	2 cut(s)	1135, 1527
MseI	TTAA	8 cut(s)	189, 315, 441, 800, 863, 1668, 1830, 2217
MslI	CAYNNNNRTG	4 cut(s)	434, 873, 962, 1500
MspA1I	CMGCKG	5 cut(s)	124, 986, 1083, 1619, 2532
MspCI	CTTAAG	1 cut(s)	1667
MspI	CCGG	6 cut(s)	33, 46, 61, 275, 403, 2196
MspR9I	CCNGG	6 cut(s)	46, 276, 404, 873, 2197, 2340
MunI	CAATTG	1 cut(s)	171
Mva1269I	GAATGC	1 cut(s)	823
MvaI	CCWGG	2 cut(s)	873, 2340
MvnI	CGCG	1 cut(s)	622
MwoI	GCNNNNNNNGC	6 cut(s)	38, 266, 779, 983, 1904, 2315
NciI	CCSGG	4 cut(s)	46, 276, 404, 2197
NdeI	CATATG	1 cut(s)	2454
NdeII	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
NheI	GCTAGC	2 cut(s)	1340, 2305
NlaIII	CATG	9 cut(s)	75, 437, 773, 917, 1773, 1938, 1947, 2058, 2381
NlaIV	GGNNCC	4 cut(s)	819, 852, 1053, 2505
NmuCI	GTSAC	7 cut(s)	77, 712, 1165, 1199, 1363, 1629, 1924
NsiI	ATGCAT	1 cut(s)	685
NspI	RCATGY	3 cut(s)	437, 1938, 1947
NspV	TTCGAA	2 cut(s)	281, 1218
OliI	CACNNNNGTG	2 cut(s)	434, 1500
PciI	ACATGT	3 cut(s)	433, 1934, 1943
PciSI	GCTCTTC	2 cut(s)	14, 2130
PctI	GAATGC	1 cut(s)	823
PdmI	GAANNNNTTC	2 cut(s)	1135, 1527
PfeI	GAWTC	5 cut(s)	1514, 1637, 1808, 1874, 2021
PleI	GAGTC	4 cut(s)	490, 879, 884, 1288
PpsI	GAGTC	4 cut(s)	490, 879, 884, 1288
PscI	ACATGT	3 cut(s)	433, 1934, 1943
Psp6I	CCWGG	2 cut(s)	871, 2338
PspEI	GGTNACC	1 cut(s)	1629
PspGI	CCWGG	2 cut(s)	871, 2338
PspN4I	GGNNCC	4 cut(s)	819, 852, 1053, 2505
PspPI	GGNCC	4 cut(s)	664, 817, 1022, 1409
PstI	CTGCAG	5 cut(s)	162, 753, 1165, 1816, 2209
PstNI	CAGNNNCTG	1 cut(s)	212
PsuI	RGATCY	1 cut(s)	1816
PvuII	CAGCTG	4 cut(s)	124, 986, 1619, 2532
RsaI	GTAC	5 cut(s)	491, 809, 2049, 2231, 2481
RsaNI	GTAC	5 cut(s)	490, 808, 2048, 2230, 2480
RseI	CAYNNNNRTG	4 cut(s)	434, 873, 962, 1500
SalI	GTCGAC	1 cut(s)	625
SapI	GCTCTTC	2 cut(s)	14, 2130
SaqAI	TTAA	8 cut(s)	189, 315, 441, 800, 863, 1668, 1830, 2217
Sau3AI	GATC	9 cut(s)	217, 426, 481, 835, 1816, 2051, 2086, 2288, 2520
Sau96I	GGNCC	4 cut(s)	664, 817, 1022, 1409
SchI	GAGTC	4 cut(s)	490, 879, 884, 1289
ScrFI	CCNGG	6 cut(s)	46, 276, 404, 873, 2197, 2340
SduI	GDGCHC	3 cut(s)	353, 880, 2476
SexAI	ACCWGGT	1 cut(s)	2338
SfaNI	GCATC	5 cut(s)	376, 670, 1060, 2250, 2305
SfcI	CTRYAG	5 cut(s)	158, 749, 1161, 1812, 2205
SfuI	TTCGAA	2 cut(s)	281, 1218
SinI	GGWCC	2 cut(s)	1022, 1409
SmiMI	CAYNNNNRTG	4 cut(s)	434, 873, 962, 1500
SmlI	CTYRAG	2 cut(s)	1667, 2447
SmoI	CTYRAG	2 cut(s)	1667, 2447
SsiI	CCGC	9 cut(s)	24, 119, 362, 622, 763, 821, 1083, 1327, 1344
SspMI	CTAG	8 cut(s)	249, 354, 1302, 1341, 1719, 1890, 2286, 2306
StyD4I	CCNGG	6 cut(s)	44, 274, 402, 871, 2195, 2338
StyI	CCWWGG	1 cut(s)	93
TaaI	ACNGT	6 cut(s)	83, 446, 1385, 1625, 1860, 2323
TaiI	ACGT	2 cut(s)	1978, 2368
TaqI	TCGA	6 cut(s)	65, 281, 626, 888, 1218, 2036
TatI	WGTACW	3 cut(s)	489, 807, 2479
TauI	GCSGC	2 cut(s)	121, 1330
TfiI	GAWTC	5 cut(s)	1514, 1637, 1808, 1874, 2021
Tru1I	TTAA	8 cut(s)	189, 315, 441, 800, 863, 1668, 1830, 2217
Tru9I	TTAA	8 cut(s)	189, 315, 441, 800, 863, 1668, 1830, 2217
TscAI	CASTG	9 cut(s)	162, 758, 1170, 1185, 1408, 2104, 2240, 2426, 2444
TseFI	GTSAC	7 cut(s)	77, 712, 1165, 1199, 1363, 1629, 1924
TseI	GCWGC	9 cut(s)	121, 160, 260, 701, 983, 986, 1104, 1160, 2204
Tsp45I	GTSAC	7 cut(s)	77, 712, 1165, 1199, 1363, 1629, 1924
TspDTI	ATGAA	6 cut(s)	758, 833, 1367, 1461, 1713, 2270
TspGWI	ACGGA	1 cut(s)	784
TspRI	CASTG	9 cut(s)	162, 758, 1170, 1185, 1408, 2104, 2240, 2426, 2444
Vha464I	CTTAAG	1 cut(s)	1667
VneI	GTGCAC	1 cut(s)	876
VpaK11BI	GGWCC	2 cut(s)	1022, 1409
XagI	CCTNNNNNAGG	1 cut(s)	204
XapI	RAATTY	4 cut(s)	283, 1061, 1221, 2041
XbaI	TCTAGA	1 cut(s)	2285
XceI	RCATGY	3 cut(s)	437, 1938, 1947
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1062
XmiI	GTMKAC	1 cut(s)	626
XmnI	GAANNNNTTC	2 cut(s)	1135, 1527
XspI	CTAG	8 cut(s)	249, 354, 1302, 1341, 1719, 1890, 2286, 2306
Zsp2I	ATGCAT	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.