Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0014721

Physical Location & Seq

Genomic Coordinates Forward (+)

49048774 .. 49053789

Gene Structure 5016 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG324700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGTTGGGTGAGGAAGATTCTGAGTGTGGGCTTGCCGCCGGAAATACTACCCGGAAAAGTTATCTCCGGTCCATGTCATGGAGTGACCGTTCACCTTCCAAACCTAATCCTTATCCAAAGCCTCAGCTCAATAGTAAAGCAAGGTCTTGCTTGCCTCCACTTCAGCCTCTTTCAATAGCCAAGAGTAATGTTAAGGAGTGGCCAAAGGCGGGTTCTGATGATCTTGGTGTTTGGCCTCAGCCCCAAACCCCTAGAGGGTCGGCTAAACCCTTTCCGGGTTCGAATCCCCCCCAACTGCCTGGGAGAGAGTTTGAGTTTAAGAAAGATAAGCTTGCTTTTTTTGATAAAGAGTGCTCCAGAATTGCGGAGCATATATACTTGGGGAGTGATGCTGTGGCTAAGAACCGTGAGGTTTTGAGGAAGAATGGCATCACCCATGTGCTCAACTGTGTTGGGTTTGTGTCTCCTGAGTATTTCAAGAATGATCTTGTGTACAAGACGCTCTGGTTGAAAGATAGCCCCTCGGAGGACATTACCAGCATTCTGTATGATGTGTTTGATTATTTTGAAGATGTGAGGAAGCAAAGTGGGAGAGTTCTTGTGCATTGTTGTCAGGGAGTGTCGCGGTCGACGGCTCTGGTGATTGCATACCTTATGTGGAGGGAGGGCCAGAGCTTTGAAGATGCATTTCAGTATGTCAAGGCAGCAAGAGGGGTGACAAACCCGAATATGGGTTTTGCTTGTCAACTTCTGCAGTGCCAGAAGCGGGTGCATGCTGTGCCTGCAAGCCCGAGTTCTGTGTTAAGGATGTACAGGATGGCCCCGCATTCATCGTATGATCCTCTTCATCTGGTGCCAAAGATGTTAAACCATCCAGGTCCACAAGGACTTGACTCTCGTGGTGCGTTTGTTGTGCATGTTCCATCTGCTATATATGTCTGGATTGGAAAGGATTGCAACACAATGATGTCAGACAAAGCAAGAGCAGCTGCCCTTCAGGTCATCCAGTATGAGAGGGCAAAGGGTCCAATTGTGGACATCAATGAAGGCAAGGAGCCACCAGAATTTTGGGACGCTCTTTCCAGTGGTCTTTCAGCAGAGGATTGCAGCAAAGGAGATGTCCAAAAGGAAGAAACTGTTTCTTCTGGAGGCGATAAGGTTGCTGCAGTGACTTGTATTCTGGTGGGTGAAAGAAAGGTTGGTGAATATGATTTGGATTTCGAAATTTTCAGTAAGGCACTTGCAGGTGGGGTTGTTCCACCATTTTCAGTATCAAATACTGAATCGGAAACTTGCCTTCCAGCCAGAGAAAATGGATGGGGCAGATTGCGGCAAAAGTTTGCTAGTGGAATTATGAAGGATTTGGTCACATCTTCTGAGCTGAACTGTAAAACTACCCCATCCAGTGATGGATTGGATATGGTTGTGGAAGTTAACAAAGAAGAAGAAGACCCTGTTTCCTTGACTGAGCCTTTATCACCATTGTCAGCGCCAAGCCACTTTTGTGGTTCACCAGATTCCTTTGAGTGTTATCCAATTAGTAGCCCAAGTAGGATAAGAGATACATGTCGGGAAGTAGGACACTCTGTTGCTCTTACCAATCCATTATCGTTTCCGACAACTGACTGTGGGTCACCCGATTCTTGTTCTTGGTTTCCTGATAACAATCTTAAGTTTAGCTCAAAATCCCCAACACTCTCCCCTTCAACCTCTGAATACTCTAGTTCATCATTTACCTTTTCACCCTCATCTTCTAATTGGTCGGACTTGTCATACTTGTCTTCTCAACAGCCTTCACCTTCAGGCTTGGATTCTGCAGATCCATTATGTATTAAGCATAGTTCCATAGCCGATAGCTCACAGTTACCTTTCAAAGAATCTCTTTCTTCACCTAGAGAGGCATTTTCAGCTCATCGTACTTTGGAAGTGACAAATACATGTTCGACATGTAAAGGGATTTCCCCTTCTATTGCAGAGCGTAGAGGGAGTAAACCTCCACCTCTAATGTTGCTATCCTCAGTTGAAGAATCACCTAAAGTTTCGAGGAATTTGGTACGCTCATGGTCGTTTTCCTTACCTGACTTGGATGATGATCTGATGGACACTGATTGCAACCAAGCCGAAAATGTGAGCAACAGAGAAGAGCTAATGTTGGATGTTGACATTATTAACCCTGAAAATGAATTACAATCTGAAGCGACCAGGGAAGCTGCAGAGGTGATTAACCCTGTTTTGTACCAGTGGCCTTCTTTGAACAAAGTGGTGATGCATCGGTCTGCCAAACTTCATTCTGGATCAGCATATCTTTTGCTAGCTCCAGATGCGACTGTGGGTGCACATAAACCTGGTGTCTTATTTGTCTGGTTGGGATGTGATATTTTGCATGAGAAAGGACAGAATGCAACATTTGAGGATAGCCATCTTCACTGGGAGACCATAGGACGCTGTTTCCTTGAGCATATGGGTTTGCCTATGAGTGCCCCTGTACAGATAGTAAGAGAAGGTGAGGAGCCAGAGCAGTTCCTGATCCATCTCAGCTGTAAATCAATACAGAACACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000188 GO:0001704 GO:0001706 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006469 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007369 GO:0007492 GO:0008150 GO:0008152 GO:0008330 GO:0009653 GO:0009790 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010563 GO:0010605 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033549 GO:0033673 GO:0035335 GO:0035970 GO:0036211 GO:0042325 GO:0042326 GO:0042578 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043407 GO:0043408 GO:0043409 GO:0043412 GO:0043549 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0060255 GO:0065007 GO:0065009 GO:0070372 GO:0070373 GO:0071704 GO:0071900 GO:0071901 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902532 GO:1990439

KEGG Pathways

Metabolic & Signaling

ko04010 ko04726 ko05418 map04010 map04726 map05418

Pfam Domains

Protein Families

DSPc Gelsolin

Protein Analysis

853

Amino Acids

93.84

Weight (kDa)

5.43

Isoelectric Point (pI)

55.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	125 - 255	3.5e-28	Dual specificity phosphatase, catalytic domain
Gelsolin	PF00626	297 - 357	4e-06	Gelsolin repeat
MPK1_gelsolin_C	PF25466	747 - 845	2.5e-27	MPK1 gelsolin domain C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014721)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25430 FvH4_4g25430
malus_domestica	MD13G1103000.v1.1 MD16G1103200.v1.1
prunus_persica	Prupe.1G242800_v2.0.a1
pyrus_communis	pycom16g08800
rosa_chinensis	RchiOBHm_Chr4g0432741
rosa_laevigata	RLG00000006816
rosa_multiflora	Rmu_co8494851.1_g000001 Rmu_sc0012180.1_g000009
rosa_roxburghii	Rroxscaffold_5G00374200
rosa_rugosa	Rorug04G0262100
rosa_samantha	Rh4AG316600 Rh4BG324700 Rh4CG339700 Rh4DG319900
rosa_wichuraiana	Rw4G027540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1235
Acc36I	ACCTGC	1 cut(s)	1235
AccB1I	GGYRCC	1 cut(s)	853
AccB7I	CCANNNNNTGG	1 cut(s)	78
AccI	GTMKAC	1 cut(s)	629
AccII	CGCG	1 cut(s)	625
AciI	CCGC	7 cut(s)	36, 209, 365, 625, 766, 824, 1330
AclWI	GGATC	4 cut(s)	833, 1814, 2302, 2521
AcoI	YGGCCR	1 cut(s)	200
AcsI	RAATTY	3 cut(s)	1064, 1224, 2047
AcuI	CTGAAG	4 cut(s)	146, 980, 1785, 2214
AfaI	GTAC	6 cut(s)	494, 812, 1918, 2055, 2237, 2487
AfiI	CCNNNNNNNGG	8 cut(s)	78, 209, 255, 275, 526, 730, 731, 766
AflII	CTTAAG	1 cut(s)	1670
AflIII	ACRYGT	3 cut(s)	1565, 1937, 1946
AgsI	TTSAA	9 cut(s)	174, 478, 511, 569, 680, 1707, 1873, 2024, 2254
AhdI	GACNNNNNGTC	1 cut(s)	1630
AjnI	CCWGG	4 cut(s)	298, 874, 2201, 2344
AjuI	GAANNNNNNNTTGG	4 cut(s)	196, 228, 1182, 1214
AleI	CACNNNNGTG	2 cut(s)	437, 1503
AloI	GAACNNNNNNTCC	2 cut(s)	73, 105
Alw21I	GWGCWC	3 cut(s)	356, 444, 2338
Alw26I	GTCTC	2 cut(s)	468, 2426
Alw44I	GTGCAC	1 cut(s)	2334
AlwI	GGATC	4 cut(s)	833, 1814, 2302, 2521
AlwNI	CAGNNNCTG	1 cut(s)	2524
Ama87I	CYCGRG	1 cut(s)	790
AoxI	GGCC	5 cut(s)	200, 233, 667, 819, 2243
ApaLI	GTGCAC	1 cut(s)	2334
ApeKI	GCWGC	6 cut(s)	704, 986, 989, 1107, 1163, 2210
ApoI	RAATTY	3 cut(s)	1064, 1224, 2047
ArsI	GACNNNNNNTTYG	2 cut(s)	1104, 1136
AspLEI	GCGC	1 cut(s)	1492
AspS9I	GGNCC	5 cut(s)	69, 667, 820, 878, 1025
AsuC2I	CCSGG	2 cut(s)	52, 276
AsuII	TTCGAA	2 cut(s)	281, 1221
AsuNHI	GCTAGC	1 cut(s)	2311
AvaI	CYCGRG	1 cut(s)	790
AvaII	GGWCC	3 cut(s)	69, 878, 1025
BaeGI	GKGCMC	2 cut(s)	2338, 2482
BalI	TGGCCA	1 cut(s)	202
BanI	GGYRCC	1 cut(s)	853
BauI	CACGAG	1 cut(s)	897
BbsI	GAAGAC	2 cut(s)	1455, 1773
Bbv12I	GWGCWC	3 cut(s)	356, 444, 2338
BbvCI	CCTCAGC	2 cut(s)	123, 237
BbvI	GCAGC	6 cut(s)	716, 976, 998, 1119, 1150, 2197
BccI	CCATC	9 cut(s)	811, 879, 931, 1311, 1403, 1408, 2092, 2427, 2538
BceAI	ACGGC	1 cut(s)	648
BcgI	CGANNNNNNTGC	2 cut(s)	1142, 1176
BciT130I	CCWGG	4 cut(s)	300, 876, 2203, 2346
BcnI	CCSGG	2 cut(s)	52, 276
BcoDI	GTCTC	2 cut(s)	468, 2426
BfaI	CTAG	5 cut(s)	252, 1344, 1722, 1893, 2312
BfmI	CTRYAG	4 cut(s)	752, 1164, 1815, 2211
BfoI	RGCGCY	1 cut(s)	1493
BfrI	CTTAAG	1 cut(s)	1670
BfuAI	ACCTGC	1 cut(s)	1235
BisI	GCNGC	8 cut(s)	36, 705, 987, 990, 1108, 1164, 1331, 2211
BlsI	GCNGC	8 cut(s)	37, 706, 988, 991, 1109, 1165, 1332, 2212
Bme1390I	CCNGG	6 cut(s)	52, 276, 300, 876, 2203, 2346
Bme18I	GGWCC	3 cut(s)	69, 878, 1025
BmeRI	GACNNNNNGTC	1 cut(s)	1630
BmeT110I	CYCGRG	1 cut(s)	790
BmgT120I	GGNCC	5 cut(s)	69, 667, 820, 878, 1025
BmiI	GGNNCC	5 cut(s)	822, 855, 1026, 1056, 2511
BmrFI	CCNGG	6 cut(s)	52, 276, 300, 876, 2203, 2346
BmrI	ACTGGG	1 cut(s)	2437
BmsI	GCATC	6 cut(s)	379, 438, 673, 2256, 2278, 2311
BmtI	GCTAGC	1 cut(s)	2315
BmuI	ACTGGG	1 cut(s)	2437
BpiI	GAAGAC	2 cut(s)	1455, 1773
BplI	GAGNNNNNCTC	2 cut(s)	1978, 2010
BpmI	CTGGAG	3 cut(s)	340, 1167, 2301
Bpu10I	CCTNAGC	2 cut(s)	123, 237
Bpu14I	TTCGAA	2 cut(s)	281, 1221
BpuEI	CTTGAG	1 cut(s)	2474
BpuMI	CCSGG	2 cut(s)	52, 276
BsaBI	GATNNNNATC	3 cut(s)	1665, 2091, 2418
BsaI	GGTCTC	1 cut(s)	2426
BsaJI	CCNNGG	3 cut(s)	299, 522, 2202
BsaWI	WCCGGW	1 cut(s)	66
BsaXI	ACNNNNNCTCC	2 cut(s)	73, 103
Bsc4I	CCNNNNNNNGG	8 cut(s)	78, 209, 255, 275, 526, 730, 731, 766
Bse1I	ACTGG	5 cut(s)	1006, 1083, 1404, 2239, 2432
Bse8I	GATNNNNATC	3 cut(s)	1665, 2091, 2418
BseBI	CCWGG	4 cut(s)	300, 876, 2203, 2346
BseDI	CCNNGG	3 cut(s)	299, 522, 2202
BseGI	GGATG	9 cut(s)	813, 822, 871, 1002, 1322, 1400, 2092, 2161, 2375
BseJI	GATNNNNATC	3 cut(s)	1665, 2091, 2418
BseLI	CCNNNNNNNGG	8 cut(s)	78, 209, 255, 275, 526, 730, 731, 766
BseMII	CTCAG	8 cut(s)	12, 137, 251, 459, 1368, 1458, 2031, 2548
BseNI	ACTGG	5 cut(s)	1006, 1083, 1404, 2239, 2432
BseRI	GAGGAG	1 cut(s)	2522
BseSI	GKGCMC	2 cut(s)	2338, 2482
BseXI	GCAGC	6 cut(s)	716, 976, 998, 1119, 1150, 2197
Bsh1236I	CGCG	1 cut(s)	625
Bsh1285I	CGRYCG	1 cut(s)	629
BshFI	GGCC	5 cut(s)	202, 235, 669, 821, 2245
BshNI	GGYRCC	1 cut(s)	853
BsiEI	CGRYCG	1 cut(s)	629
BsiHKAI	GWGCWC	3 cut(s)	356, 444, 2338
BsiHKCI	CYCGRG	1 cut(s)	790
BsiSI	CCGG	4 cut(s)	39, 52, 67, 275
BslFI	GGGAC	1 cut(s)	1085
BslI	CCNNNNNNNGG	8 cut(s)	78, 209, 255, 275, 526, 730, 731, 766
BsmAI	GTCTC	2 cut(s)	468, 2426
BsmFI	GGGAC	1 cut(s)	1085
BsmI	GAATGC	3 cut(s)	540, 826, 2404
BsnI	GGCC	5 cut(s)	202, 235, 669, 821, 2245
Bso31I	GGTCTC	1 cut(s)	2426
BsoBI	CYCGRG	1 cut(s)	790
Bsp119I	TTCGAA	2 cut(s)	281, 1221
Bsp1286I	GDGCHC	4 cut(s)	356, 444, 2338, 2482
Bsp1407I	TGTACA	3 cut(s)	492, 810, 2485
Bsp143I	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
BspACI	CCGC	7 cut(s)	36, 209, 365, 625, 766, 824, 1330
BspANI	GGCC	5 cut(s)	202, 235, 669, 821, 2245
BspCNI	CTCAG	8 cut(s)	13, 136, 250, 460, 1369, 1459, 2030, 2547
BspFNI	CGCG	1 cut(s)	625
BspLI	GGNNCC	5 cut(s)	822, 855, 1026, 1056, 2511
BspMAI	CTGCAG	4 cut(s)	756, 1168, 1819, 2215
BspMI	ACCTGC	1 cut(s)	1235
BspOI	GCTAGC	1 cut(s)	2315
BspPI	GGATC	4 cut(s)	833, 1814, 2302, 2521
BspQI	GCTCTTC	1 cut(s)	2136
BspT104I	TTCGAA	2 cut(s)	281, 1221
BspT107I	GGYRCC	1 cut(s)	853
BspTI	CTTAAG	1 cut(s)	1670
BspTNI	GGTCTC	1 cut(s)	2426
BsrGI	TGTACA	3 cut(s)	492, 810, 2485
BsrI	ACTGG	5 cut(s)	1006, 1083, 1404, 2239, 2432
BssECI	CCNNGG	3 cut(s)	299, 522, 2202
BssMI	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
BssSI	CACGAG	1 cut(s)	897
Bst2BI	CACGAG	1 cut(s)	897
Bst2UI	CCWGG	4 cut(s)	300, 876, 2203, 2346
Bst4CI	ACNGT	8 cut(s)	89, 407, 449, 1138, 1388, 1628, 1863, 2329
Bst6I	CTCTTC	2 cut(s)	849, 2136
BstAFI	CTTAAG	1 cut(s)	1670
BstAPI	GCANNNNNTGC	1 cut(s)	778
BstAUI	TGTACA	3 cut(s)	492, 810, 2485
BstBI	TTCGAA	2 cut(s)	281, 1221
BstC8I	GCNNGC	7 cut(s)	33, 152, 333, 774, 783, 787, 2313
BstDEI	CTNAG	9 cut(s)	21, 123, 237, 399, 468, 1377, 1467, 2017, 2534
BstEII	GGTNACC	1 cut(s)	1632
BstF5I	GGATG	9 cut(s)	813, 822, 871, 1002, 1322, 1400, 2092, 2161, 2375
BstFNI	CGCG	1 cut(s)	625
BstH2I	RGCGCY	1 cut(s)	1493
BstHHI	GCGC	1 cut(s)	1492
BstKTI	GATC	7 cut(s)	223, 487, 841, 1822, 2095, 2297, 2529
BstMAI	GTCTC	2 cut(s)	468, 2426
BstMBI	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
BstMCI	CGRYCG	1 cut(s)	629
BstMWI	GCNNNNNNNGC	5 cut(s)	778, 782, 986, 1907, 2321
BstNI	CCWGG	4 cut(s)	300, 876, 2203, 2346
BstNSI	RCATGY	5 cut(s)	776, 920, 1569, 1941, 1950
BstPI	GGTNACC	1 cut(s)	1632
BstSCI	CCNGG	6 cut(s)	50, 274, 298, 874, 2201, 2344
BstSFI	CTRYAG	4 cut(s)	752, 1164, 1815, 2211
BstSLI	GKGCMC	2 cut(s)	2338, 2482
BstUI	CGCG	1 cut(s)	625
BstV1I	GCAGC	6 cut(s)	716, 976, 998, 1119, 1150, 2197
BstV2I	GAAGAC	2 cut(s)	1455, 1773
BstX2I	RGATCY	1 cut(s)	1819
BstXI	CCANNNNNNTGG	3 cut(s)	299, 1068, 1505
BstYI	RGATCY	1 cut(s)	1819
BsuRI	GGCC	5 cut(s)	202, 235, 669, 821, 2245
BtsCI	GGATG	9 cut(s)	813, 822, 871, 1002, 1322, 1400, 2092, 2161, 2375
BtsI	GCAGTG	2 cut(s)	761, 1173
BtsIMutI	CAGTG	7 cut(s)	761, 1090, 1173, 1411, 2103, 2246, 2425
BveI	ACCTGC	1 cut(s)	1235
Cac8I	GCNNGC	7 cut(s)	33, 152, 333, 774, 783, 787, 2313
CaiI	CAGNNNCTG	1 cut(s)	2524
CfoI	GCGC	1 cut(s)	1492
Cfr13I	GGNCC	5 cut(s)	69, 667, 820, 878, 1025
CseI	GACGC	3 cut(s)	508, 1082, 2451
CsiI	ACCWGGT	1 cut(s)	2344
Csp6I	GTAC	6 cut(s)	493, 811, 1917, 2054, 2236, 2486
CviQI	GTAC	6 cut(s)	493, 811, 1917, 2054, 2236, 2486
DdeI	CTNAG	9 cut(s)	21, 123, 237, 399, 468, 1377, 1467, 2017, 2534
DpnI	GATC	7 cut(s)	222, 486, 840, 1821, 2094, 2296, 2528
DpnII	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
DriI	GACNNNNNGTC	1 cut(s)	1630
EaeI	YGGCCR	1 cut(s)	200
Eam1104I	CTCTTC	2 cut(s)	849, 2136
Eam1105I	GACNNNNNGTC	1 cut(s)	1630
EarI	CTCTTC	2 cut(s)	849, 2136
Eco31I	GGTCTC	1 cut(s)	2426
Eco47I	GGWCC	3 cut(s)	69, 878, 1025
Eco57I	CTGAAG	4 cut(s)	146, 980, 1785, 2214
Eco88I	CYCGRG	1 cut(s)	790
Eco91I	GGTNACC	1 cut(s)	1632
EcoO65I	GGTNACC	1 cut(s)	1632
EcoRII	CCWGG	4 cut(s)	298, 874, 2201, 2344
EcoT22I	ATGCAT	2 cut(s)	688, 2271
FalI	AAGNNNNNCTT	4 cut(s)	315, 347, 1866, 1898
FaqI	GGGAC	1 cut(s)	1085
FauI	CCCGC	3 cut(s)	202, 759, 831
FauNDI	CATATG	1 cut(s)	2460
FblI	GTMKAC	1 cut(s)	629
Fnu4HI	GCNGC	8 cut(s)	36, 705, 987, 990, 1108, 1164, 1331, 2211
FokI	GGATG	9 cut(s)	820, 829, 858, 989, 1329, 1387, 2099, 2168, 2382
Fsp4HI	GCNGC	8 cut(s)	36, 705, 987, 990, 1108, 1164, 1331, 2211
FspBI	CTAG	5 cut(s)	252, 1344, 1722, 1893, 2312
GlaI	GCGC	1 cut(s)	1491
GluI	GCNGC	8 cut(s)	36, 705, 987, 990, 1108, 1164, 1331, 2211
GsuI	CTGGAG	3 cut(s)	340, 1167, 2301
HaeII	RGCGCY	1 cut(s)	1493
HaeIII	GGCC	5 cut(s)	202, 235, 669, 821, 2245
HapII	CCGG	4 cut(s)	39, 52, 67, 275
HgaI	GACGC	3 cut(s)	508, 1082, 2451
HhaI	GCGC	1 cut(s)	1492
Hin6I	GCGC	1 cut(s)	1490
HinP1I	GCGC	1 cut(s)	1490
HincII	GTYRAC	4 cut(s)	630, 746, 1435, 2161
HindII	GTYRAC	4 cut(s)	630, 746, 1435, 2161
HindIII	AAGCTT	1 cut(s)	329
HinfI	GANTC	9 cut(s)	17, 283, 893, 1283, 1517, 1640, 1811, 1877, 2027
HpaI	GTTAAC	1 cut(s)	1435
HpaII	CCGG	4 cut(s)	39, 52, 67, 275
Hpy99I	CGWCG	1 cut(s)	634
HpyCH4III	ACNGT	8 cut(s)	89, 407, 449, 1138, 1388, 1628, 1863, 2329
HpyF10VI	GCNNNNNNNGC	5 cut(s)	778, 782, 986, 1907, 2321
HpyF3I	CTNAG	9 cut(s)	21, 123, 237, 399, 468, 1377, 1467, 2017, 2534
HspAI	GCGC	1 cut(s)	1490
KspAI	GTTAAC	1 cut(s)	1435
Kzo9I	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
LguI	GCTCTTC	1 cut(s)	2136
LmnI	GCTCC	5 cut(s)	359, 367, 1054, 2320, 2509
Lsp1109I	GCAGC	6 cut(s)	716, 976, 998, 1119, 1150, 2197
LweI	GCATC	6 cut(s)	379, 438, 673, 2256, 2278, 2311
MabI	ACCWGGT	1 cut(s)	2344
MaeI	CTAG	5 cut(s)	252, 1344, 1722, 1893, 2312
MaeIII	GTNAC	7 cut(s)	83, 715, 1168, 1366, 1632, 1863, 1927
MalI	GATC	7 cut(s)	222, 486, 840, 1821, 2094, 2296, 2528
MboI	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	1 cut(s)	1819
MhlI	GDGCHC	4 cut(s)	356, 444, 2338, 2482
MlsI	TGGCCA	1 cut(s)	202
MluCI	AATT	9 cut(s)	360, 1029, 1064, 1224, 1350, 1536, 1756, 2047, 2183
MluNI	TGGCCA	1 cut(s)	202
MlyI	GAGTC	1 cut(s)	887
MmeI	TCCRAC	3 cut(s)	1640, 1743, 2133
Mox20I	TGGCCA	1 cut(s)	202
Mph1103I	ATGCAT	2 cut(s)	688, 2271
MscI	TGGCCA	1 cut(s)	202
MseI	TTAA	9 cut(s)	192, 318, 803, 866, 1434, 1671, 1833, 2169, 2223
MslI	CAYNNNNRTG	3 cut(s)	437, 965, 1503
Msp20I	TGGCCA	1 cut(s)	202
MspA1I	CMGCKG	2 cut(s)	989, 2538
MspCI	CTTAAG	1 cut(s)	1670
MspI	CCGG	4 cut(s)	39, 52, 67, 275
MspR9I	CCNGG	6 cut(s)	52, 276, 300, 876, 2203, 2346
MunI	CAATTG	1 cut(s)	1029
Mva1269I	GAATGC	3 cut(s)	540, 826, 2404
MvaI	CCWGG	4 cut(s)	300, 876, 2203, 2346
MvnI	CGCG	1 cut(s)	625
MwoI	GCNNNNNNNGC	5 cut(s)	778, 782, 986, 1907, 2321
NciI	CCSGG	2 cut(s)	52, 276
NdeI	CATATG	1 cut(s)	2460
NdeII	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
NheI	GCTAGC	1 cut(s)	2311
NlaIV	GGNNCC	5 cut(s)	822, 855, 1026, 1056, 2511
NmuCI	GTSAC	6 cut(s)	83, 715, 1168, 1366, 1632, 1927
NsiI	ATGCAT	2 cut(s)	688, 2271
NspI	RCATGY	5 cut(s)	776, 920, 1569, 1941, 1950
NspV	TTCGAA	2 cut(s)	281, 1221
OliI	CACNNNNGTG	2 cut(s)	437, 1503
PaeI	GCATGC	1 cut(s)	776
PaqCI	CACCTGC	1 cut(s)	1235
PciI	ACATGT	3 cut(s)	1565, 1937, 1946
PciSI	GCTCTTC	1 cut(s)	2136
PctI	GAATGC	3 cut(s)	540, 826, 2404
PfeI	GAWTC	8 cut(s)	17, 283, 1283, 1517, 1640, 1811, 1877, 2027
PflMI	CCANNNNNTGG	1 cut(s)	78
PkrI	GCNGC	8 cut(s)	37, 706, 988, 991, 1109, 1165, 1332, 2212
PleI	GAGTC	1 cut(s)	887
PpsI	GAGTC	1 cut(s)	887
PscI	ACATGT	3 cut(s)	1565, 1937, 1946
Psp6I	CCWGG	4 cut(s)	298, 874, 2201, 2344
PspEI	GGTNACC	1 cut(s)	1632
PspGI	CCWGG	4 cut(s)	298, 874, 2201, 2344
PspN4I	GGNNCC	5 cut(s)	822, 855, 1026, 1056, 2511
PspPI	GGNCC	5 cut(s)	69, 667, 820, 878, 1025
PstI	CTGCAG	4 cut(s)	756, 1168, 1819, 2215
PstNI	CAGNNNCTG	1 cut(s)	2524
PsuI	RGATCY	1 cut(s)	1819
PvuII	CAGCTG	2 cut(s)	989, 2538
RsaI	GTAC	6 cut(s)	494, 812, 1918, 2055, 2237, 2487
RsaNI	GTAC	6 cut(s)	493, 811, 1917, 2054, 2236, 2486
RseI	CAYNNNNRTG	3 cut(s)	437, 965, 1503
SalI	GTCGAC	1 cut(s)	628
SapI	GCTCTTC	1 cut(s)	2136
SaqAI	TTAA	9 cut(s)	192, 318, 803, 866, 1434, 1671, 1833, 2169, 2223
SatI	GCNGC	8 cut(s)	36, 705, 987, 990, 1108, 1164, 1331, 2211
Sau3AI	GATC	7 cut(s)	220, 484, 838, 1819, 2092, 2294, 2526
Sau96I	GGNCC	5 cut(s)	69, 667, 820, 878, 1025
SchI	GAGTC	1 cut(s)	887
ScrFI	CCNGG	6 cut(s)	52, 276, 300, 876, 2203, 2346
SduI	GDGCHC	4 cut(s)	356, 444, 2338, 2482
SexAI	ACCWGGT	1 cut(s)	2344
SfaNI	GCATC	6 cut(s)	379, 438, 673, 2256, 2278, 2311
SfcI	CTRYAG	4 cut(s)	752, 1164, 1815, 2211
SfuI	TTCGAA	2 cut(s)	281, 1221
SinI	GGWCC	3 cut(s)	69, 878, 1025
SmiMI	CAYNNNNRTG	3 cut(s)	437, 965, 1503
SmlI	CTYRAG	2 cut(s)	1670, 2453
SmoI	CTYRAG	2 cut(s)	1670, 2453
SphI	GCATGC	1 cut(s)	776
Sse9I	AATT	9 cut(s)	360, 1029, 1064, 1224, 1350, 1536, 1756, 2047, 2183
SsiI	CCGC	7 cut(s)	36, 209, 365, 625, 766, 824, 1330
SspMI	CTAG	5 cut(s)	252, 1344, 1722, 1893, 2312
StyD4I	CCNGG	6 cut(s)	50, 274, 298, 874, 2201, 2344
TaaI	ACNGT	8 cut(s)	89, 407, 449, 1138, 1388, 1628, 1863, 2329
TaqI	TCGA	5 cut(s)	281, 629, 1221, 1943, 2042
TaqII	GACCGA	1 cut(s)	2262
TasI	AATT	9 cut(s)	360, 1029, 1064, 1224, 1350, 1536, 1756, 2047, 2183
TatI	WGTACW	3 cut(s)	492, 810, 2485
TauI	GCSGC	2 cut(s)	38, 1333
TfiI	GAWTC	8 cut(s)	17, 283, 1283, 1517, 1640, 1811, 1877, 2027
Tru1I	TTAA	9 cut(s)	192, 318, 803, 866, 1434, 1671, 1833, 2169, 2223
Tru9I	TTAA	9 cut(s)	192, 318, 803, 866, 1434, 1671, 1833, 2169, 2223
TscAI	CASTG	7 cut(s)	761, 1090, 1173, 1411, 2110, 2246, 2432
TseFI	GTSAC	6 cut(s)	83, 715, 1168, 1366, 1632, 1927
TseI	GCWGC	6 cut(s)	704, 986, 989, 1107, 1163, 2210
Tsp45I	GTSAC	6 cut(s)	83, 715, 1168, 1366, 1632, 1927
TspDTI	ATGAA	7 cut(s)	819, 836, 1059, 1370, 1716, 2196, 2276
TspRI	CASTG	7 cut(s)	761, 1090, 1173, 1411, 2110, 2246, 2432
Van91I	CCANNNNNTGG	1 cut(s)	78
Vha464I	CTTAAG	1 cut(s)	1670
VneI	GTGCAC	1 cut(s)	2334
VpaK11BI	GGWCC	3 cut(s)	69, 878, 1025
XapI	RAATTY	3 cut(s)	1064, 1224, 2047
XceI	RCATGY	5 cut(s)	776, 920, 1569, 1941, 1950
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1065, 1411
XmiI	GTMKAC	1 cut(s)	629
XspI	CTAG	5 cut(s)	252, 1344, 1722, 1893, 2312
Zsp2I	ATGCAT	2 cut(s)	688, 2271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.