Protein-tyrosine-phosphatase MKP1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g25430 FvH4_4g25430 |
| malus_domestica | MD13G1103000.v1.1 MD16G1103200.v1.1 |
| prunus_persica | Prupe.1G242800_v2.0.a1 |
| pyrus_communis | pycom16g08800 |
| rosa_chinensis | RchiOBHm_Chr4g0432741 |
| rosa_laevigata | RLG00000006816 |
| rosa_multiflora | Rmu_co8494851.1_g000001 Rmu_sc0012180.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00374200 |
| rosa_rugosa | Rorug04G0262100 |
| rosa_samantha | Rh4AG316600 Rh4BG324700 Rh4CG339700 Rh4DG319900 |
| rosa_wichuraiana | Rw4G027540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1229 |
| Acc36I | ACCTGC | 1 cut(s) | 1229 |
| AccB1I | GGYRCC | 1 cut(s) | 847 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 75 |
| AccI | GTMKAC | 1 cut(s) | 623 |
| AciI | CCGC | 7 cut(s) | 33, 206, 359, 760, 818, 1101, 1324 |
| AclWI | GGATC | 4 cut(s) | 431, 827, 1808, 2515 |
| AcoI | YGGCCR | 2 cut(s) | 197, 1296 |
| AcsI | RAATTY | 3 cut(s) | 1058, 1218, 2041 |
| AcuI | CTGAAG | 3 cut(s) | 143, 1779, 2208 |
| AfaI | GTAC | 7 cut(s) | 488, 644, 806, 1912, 2049, 2231, 2481 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 75, 206, 252, 272, 520, 724, 725, 760, 1142 |
| AflIII | ACRYGT | 4 cut(s) | 1559, 1770, 1931, 1940 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1624 |
| AjnI | CCWGG | 3 cut(s) | 868, 2195, 2338 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 193, 225, 1176, 1208 |
| AleI | CACNNNNGTG | 2 cut(s) | 431, 1497 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 70, 102 |
| Alw21I | GWGCWC | 2 cut(s) | 350, 438 |
| Alw26I | GTCTC | 2 cut(s) | 462, 2420 |
| AlwI | GGATC | 4 cut(s) | 431, 827, 1808, 2515 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2518 |
| Ama87I | CYCGRG | 1 cut(s) | 784 |
| AoxI | GGCC | 6 cut(s) | 197, 230, 661, 813, 1296, 2237 |
| ApeKI | GCWGC | 5 cut(s) | 698, 980, 983, 1157, 2204 |
| ApoI | RAATTY | 3 cut(s) | 1058, 1218, 2041 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1262, 1294 |
| AspLEI | GCGC | 1 cut(s) | 1486 |
| AspS9I | GGNCC | 5 cut(s) | 66, 661, 814, 872, 1019 |
| AsuC2I | CCSGG | 2 cut(s) | 49, 273 |
| AsuII | TTCGAA | 2 cut(s) | 672, 1215 |
| AsuNHI | GCTAGC | 1 cut(s) | 2305 |
| AvaI | CYCGRG | 1 cut(s) | 784 |
| AvaII | GGWCC | 3 cut(s) | 66, 872, 1019 |
| BaeGI | GKGCMC | 1 cut(s) | 2476 |
| BalI | TGGCCA | 1 cut(s) | 199 |
| BanI | GGYRCC | 1 cut(s) | 847 |
| BauI | CACGAG | 1 cut(s) | 891 |
| BbsI | GAAGAC | 2 cut(s) | 1449, 1767 |
| Bbv12I | GWGCWC | 2 cut(s) | 350, 438 |
| BbvCI | CCTCAGC | 2 cut(s) | 120, 234 |
| BbvI | GCAGC | 5 cut(s) | 710, 970, 992, 1144, 2191 |
| BceAI | ACGGC | 1 cut(s) | 642 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1136, 1170 |
| BciT130I | CCWGG | 3 cut(s) | 870, 2197, 2340 |
| BcnI | CCSGG | 2 cut(s) | 49, 273 |
| BcoDI | GTCTC | 2 cut(s) | 462, 2420 |
| BfaI | CTAG | 6 cut(s) | 249, 1338, 1716, 1887, 2286, 2306 |
| BfmI | CTRYAG | 4 cut(s) | 746, 1158, 1809, 2205 |
| BfoI | RGCGCY | 1 cut(s) | 1487 |
| BfuAI | ACCTGC | 1 cut(s) | 1229 |
| BisI | GCNGC | 8 cut(s) | 33, 699, 981, 984, 1102, 1158, 1325, 2205 |
| BlsI | GCNGC | 8 cut(s) | 34, 700, 982, 985, 1103, 1159, 1326, 2206 |
| Bme1390I | CCNGG | 5 cut(s) | 49, 273, 870, 2197, 2340 |
| Bme18I | GGWCC | 3 cut(s) | 66, 872, 1019 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1624 |
| BmeT110I | CYCGRG | 1 cut(s) | 784 |
| BmgT120I | GGNCC | 5 cut(s) | 66, 661, 814, 872, 1019 |
| BmiI | GGNNCC | 5 cut(s) | 816, 849, 1020, 1050, 2505 |
| BmrFI | CCNGG | 5 cut(s) | 49, 273, 870, 2197, 2340 |
| BmrI | ACTGGG | 1 cut(s) | 2431 |
| BmsI | GCATC | 5 cut(s) | 373, 667, 2250, 2272, 2305 |
| BmtI | GCTAGC | 1 cut(s) | 2309 |
| BmuI | ACTGGG | 1 cut(s) | 2431 |
| BpiI | GAAGAC | 2 cut(s) | 1449, 1767 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1972, 2004 |
| BpmI | CTGGAG | 3 cut(s) | 334, 1161, 2295 |
| Bpu10I | CCTNAGC | 2 cut(s) | 120, 234 |
| Bpu14I | TTCGAA | 2 cut(s) | 672, 1215 |
| BpuEI | CTTGAG | 1 cut(s) | 2468 |
| BpuMI | CCSGG | 2 cut(s) | 49, 273 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1659, 2085, 2412 |
| BsaI | GGTCTC | 1 cut(s) | 2420 |
| BsaJI | CCNNGG | 1 cut(s) | 2196 |
| BsaWI | WCCGGW | 2 cut(s) | 63, 1174 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 70, 100 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 75, 206, 252, 272, 520, 724, 725, 760, 1142 |
| Bse1I | ACTGG | 5 cut(s) | 1000, 1077, 1398, 2233, 2426 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1659, 2085, 2412 |
| BseBI | CCWGG | 3 cut(s) | 870, 2197, 2340 |
| BseDI | CCNNGG | 1 cut(s) | 2196 |
| BseGI | GGATG | 9 cut(s) | 807, 816, 865, 996, 1316, 1394, 2086, 2155, 2369 |
| BseJI | GATNNNNATC | 3 cut(s) | 1659, 2085, 2412 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 75, 206, 252, 272, 520, 724, 725, 760, 1142 |
| BseMII | CTCAG | 9 cut(s) | 134, 248, 285, 453, 531, 1266, 1362, 2025, 2542 |
| BseNI | ACTGG | 5 cut(s) | 1000, 1077, 1398, 2233, 2426 |
| BseRI | GAGGAG | 1 cut(s) | 2516 |
| BseSI | GKGCMC | 1 cut(s) | 2476 |
| BseXI | GCAGC | 5 cut(s) | 710, 970, 992, 1144, 2191 |
| Bsh1285I | CGRYCG | 1 cut(s) | 623 |
| BshFI | GGCC | 6 cut(s) | 199, 232, 663, 815, 1298, 2239 |
| BshNI | GGYRCC | 1 cut(s) | 847 |
| BsiEI | CGRYCG | 1 cut(s) | 623 |
| BsiHKAI | GWGCWC | 2 cut(s) | 350, 438 |
| BsiHKCI | CYCGRG | 1 cut(s) | 784 |
| BsiSI | CCGG | 6 cut(s) | 36, 49, 64, 272, 1175, 1295 |
| BslFI | GGGAC | 1 cut(s) | 1079 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 75, 206, 252, 272, 520, 724, 725, 760, 1142 |
| BsmAI | GTCTC | 2 cut(s) | 462, 2420 |
| BsmFI | GGGAC | 1 cut(s) | 1079 |
| BsmI | GAATGC | 3 cut(s) | 534, 820, 2398 |
| BsnI | GGCC | 6 cut(s) | 199, 232, 663, 815, 1298, 2239 |
| Bso31I | GGTCTC | 1 cut(s) | 2420 |
| BsoBI | CYCGRG | 1 cut(s) | 784 |
| Bsp119I | TTCGAA | 2 cut(s) | 672, 1215 |
| Bsp1286I | GDGCHC | 3 cut(s) | 350, 438, 2476 |
| Bsp1407I | TGTACA | 3 cut(s) | 486, 804, 2479 |
| Bsp143I | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| BspACI | CCGC | 7 cut(s) | 33, 206, 359, 760, 818, 1101, 1324 |
| BspANI | GGCC | 6 cut(s) | 199, 232, 663, 815, 1298, 2239 |
| BspCNI | CTCAG | 9 cut(s) | 133, 247, 286, 454, 530, 1267, 1363, 2024, 2541 |
| BspLI | GGNNCC | 5 cut(s) | 816, 849, 1020, 1050, 2505 |
| BspMAI | CTGCAG | 4 cut(s) | 750, 1162, 1813, 2209 |
| BspMI | ACCTGC | 1 cut(s) | 1229 |
| BspOI | GCTAGC | 1 cut(s) | 2309 |
| BspPI | GGATC | 4 cut(s) | 431, 827, 1808, 2515 |
| BspQI | GCTCTTC | 1 cut(s) | 2130 |
| BspT104I | TTCGAA | 2 cut(s) | 672, 1215 |
| BspT107I | GGYRCC | 1 cut(s) | 847 |
| BspTNI | GGTCTC | 1 cut(s) | 2420 |
| BsrGI | TGTACA | 3 cut(s) | 486, 804, 2479 |
| BsrI | ACTGG | 5 cut(s) | 1000, 1077, 1398, 2233, 2426 |
| BssECI | CCNNGG | 1 cut(s) | 2196 |
| BssMI | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| BssSI | CACGAG | 1 cut(s) | 891 |
| Bst2BI | CACGAG | 1 cut(s) | 891 |
| Bst2UI | CCWGG | 3 cut(s) | 870, 2197, 2340 |
| Bst4CI | ACNGT | 8 cut(s) | 86, 401, 443, 621, 1382, 1622, 1857, 2323 |
| Bst6I | CTCTTC | 3 cut(s) | 12, 843, 2130 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 772 |
| BstAUI | TGTACA | 3 cut(s) | 486, 804, 2479 |
| BstBI | TTCGAA | 2 cut(s) | 672, 1215 |
| BstC8I | GCNNGC | 7 cut(s) | 30, 149, 327, 768, 777, 781, 2307 |
| BstEII | GGTNACC | 1 cut(s) | 1626 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| BstF5I | GGATG | 9 cut(s) | 807, 816, 865, 996, 1316, 1394, 2086, 2155, 2369 |
| BstH2I | RGCGCY | 1 cut(s) | 1487 |
| BstHHI | GCGC | 1 cut(s) | 1486 |
| BstKTI | GATC | 8 cut(s) | 220, 426, 481, 835, 1816, 2089, 2291, 2523 |
| BstMAI | GTCTC | 2 cut(s) | 462, 2420 |
| BstMBI | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| BstMCI | CGRYCG | 1 cut(s) | 623 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 772, 776, 980, 1901, 2315 |
| BstNI | CCWGG | 3 cut(s) | 870, 2197, 2340 |
| BstNSI | RCATGY | 6 cut(s) | 770, 914, 1563, 1774, 1935, 1944 |
| BstPI | GGTNACC | 1 cut(s) | 1626 |
| BstSCI | CCNGG | 5 cut(s) | 47, 271, 868, 2195, 2338 |
| BstSFI | CTRYAG | 4 cut(s) | 746, 1158, 1809, 2205 |
| BstSLI | GKGCMC | 1 cut(s) | 2476 |
| BstV1I | GCAGC | 5 cut(s) | 710, 970, 992, 1144, 2191 |
| BstV2I | GAAGAC | 2 cut(s) | 1449, 1767 |
| BstX2I | RGATCY | 1 cut(s) | 1813 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1062, 1499 |
| BstYI | RGATCY | 1 cut(s) | 1813 |
| BsuRI | GGCC | 6 cut(s) | 199, 232, 663, 815, 1298, 2239 |
| BtsCI | GGATG | 9 cut(s) | 807, 816, 865, 996, 1316, 1394, 2086, 2155, 2369 |
| BtsI | GCAGTG | 2 cut(s) | 755, 1167 |
| BtsIMutI | CAGTG | 7 cut(s) | 755, 1084, 1167, 1405, 2097, 2240, 2419 |
| BveI | ACCTGC | 1 cut(s) | 1229 |
| Cac8I | GCNNGC | 7 cut(s) | 30, 149, 327, 768, 777, 781, 2307 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2518 |
| CfoI | GCGC | 1 cut(s) | 1486 |
| Cfr13I | GGNCC | 5 cut(s) | 66, 661, 814, 872, 1019 |
| CseI | GACGC | 3 cut(s) | 502, 1076, 2445 |
| CsiI | ACCWGGT | 1 cut(s) | 2338 |
| Csp6I | GTAC | 7 cut(s) | 487, 643, 805, 1911, 2048, 2230, 2480 |
| CviQI | GTAC | 7 cut(s) | 487, 643, 805, 1911, 2048, 2230, 2480 |
| DpnI | GATC | 8 cut(s) | 219, 425, 480, 834, 1815, 2088, 2290, 2522 |
| DpnII | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1624 |
| EaeI | YGGCCR | 2 cut(s) | 197, 1296 |
| Eam1104I | CTCTTC | 3 cut(s) | 12, 843, 2130 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1624 |
| EarI | CTCTTC | 3 cut(s) | 12, 843, 2130 |
| Eco31I | GGTCTC | 1 cut(s) | 2420 |
| Eco47I | GGWCC | 3 cut(s) | 66, 872, 1019 |
| Eco57I | CTGAAG | 3 cut(s) | 143, 1779, 2208 |
| Eco88I | CYCGRG | 1 cut(s) | 784 |
| Eco91I | GGTNACC | 1 cut(s) | 1626 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| EcoO65I | GGTNACC | 1 cut(s) | 1626 |
| EcoRII | CCWGG | 3 cut(s) | 868, 2195, 2338 |
| EcoT22I | ATGCAT | 2 cut(s) | 682, 2265 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 309, 341, 1860, 1892 |
| FaqI | GGGAC | 1 cut(s) | 1079 |
| FauI | CCCGC | 3 cut(s) | 199, 753, 825 |
| FauNDI | CATATG | 1 cut(s) | 2454 |
| FblI | GTMKAC | 1 cut(s) | 623 |
| Fnu4HI | GCNGC | 8 cut(s) | 33, 699, 981, 984, 1102, 1158, 1325, 2205 |
| FokI | GGATG | 9 cut(s) | 814, 823, 852, 983, 1323, 1381, 2093, 2162, 2376 |
| Fsp4HI | GCNGC | 8 cut(s) | 33, 699, 981, 984, 1102, 1158, 1325, 2205 |
| FspBI | CTAG | 6 cut(s) | 249, 1338, 1716, 1887, 2286, 2306 |
| GlaI | GCGC | 1 cut(s) | 1485 |
| GluI | GCNGC | 8 cut(s) | 33, 699, 981, 984, 1102, 1158, 1325, 2205 |
| GsuI | CTGGAG | 3 cut(s) | 334, 1161, 2295 |
| HaeII | RGCGCY | 1 cut(s) | 1487 |
| HaeIII | GGCC | 6 cut(s) | 199, 232, 663, 815, 1298, 2239 |
| HapII | CCGG | 6 cut(s) | 36, 49, 64, 272, 1175, 1295 |
| HgaI | GACGC | 3 cut(s) | 502, 1076, 2445 |
| HhaI | GCGC | 1 cut(s) | 1486 |
| Hin6I | GCGC | 1 cut(s) | 1484 |
| HinP1I | GCGC | 1 cut(s) | 1484 |
| HincII | GTYRAC | 3 cut(s) | 624, 740, 2155 |
| HindII | GTYRAC | 3 cut(s) | 624, 740, 2155 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 8 cut(s) | 280, 887, 1277, 1511, 1634, 1805, 1871, 2021 |
| HpaII | CCGG | 6 cut(s) | 36, 49, 64, 272, 1175, 1295 |
| Hpy166II | GTNNAC | 9 cut(s) | 89, 487, 624, 740, 875, 1030, 1505, 1985, 2155 |
| Hpy188I | TCNGA | 9 cut(s) | 214, 520, 967, 1282, 1372, 1708, 1759, 2091, 2188 |
| Hpy8I | GTNNAC | 9 cut(s) | 89, 487, 624, 740, 875, 1030, 1505, 1985, 2155 |
| Hpy99I | CGWCG | 1 cut(s) | 628 |
| HpyCH4III | ACNGT | 8 cut(s) | 86, 401, 443, 621, 1382, 1622, 1857, 2323 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 772, 776, 980, 1901, 2315 |
| HspAI | GCGC | 1 cut(s) | 1484 |
| Kzo9I | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| LguI | GCTCTTC | 1 cut(s) | 2130 |
| LmnI | GCTCC | 5 cut(s) | 353, 361, 1048, 2314, 2503 |
| Lsp1109I | GCAGC | 5 cut(s) | 710, 970, 992, 1144, 2191 |
| LweI | GCATC | 5 cut(s) | 373, 667, 2250, 2272, 2305 |
| MabI | ACCWGGT | 1 cut(s) | 2338 |
| MaeI | CTAG | 6 cut(s) | 249, 1338, 1716, 1887, 2286, 2306 |
| MaeIII | GTNAC | 8 cut(s) | 80, 615, 709, 1162, 1360, 1626, 1857, 1921 |
| MalI | GATC | 8 cut(s) | 219, 425, 480, 834, 1815, 2088, 2290, 2522 |
| MboI | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| MfeI | CAATTG | 1 cut(s) | 1023 |
| MflI | RGATCY | 1 cut(s) | 1813 |
| MhlI | GDGCHC | 3 cut(s) | 350, 438, 2476 |
| MlsI | TGGCCA | 1 cut(s) | 199 |
| MluCI | AATT | 9 cut(s) | 354, 1023, 1058, 1218, 1344, 1530, 1750, 2041, 2177 |
| MluNI | TGGCCA | 1 cut(s) | 199 |
| MlyI | GAGTC | 2 cut(s) | 881, 1286 |
| MmeI | TCCRAC | 4 cut(s) | 1260, 1634, 1737, 2127 |
| Mox20I | TGGCCA | 1 cut(s) | 199 |
| Mph1103I | ATGCAT | 2 cut(s) | 682, 2265 |
| MscI | TGGCCA | 1 cut(s) | 199 |
| MseI | TTAA | 7 cut(s) | 189, 261, 312, 797, 860, 1827, 2217 |
| MslI | CAYNNNNRTG | 3 cut(s) | 431, 959, 1497 |
| Msp20I | TGGCCA | 1 cut(s) | 199 |
| MspA1I | CMGCKG | 2 cut(s) | 983, 2532 |
| MspI | CCGG | 6 cut(s) | 36, 49, 64, 272, 1175, 1295 |
| MspR9I | CCNGG | 5 cut(s) | 49, 273, 870, 2197, 2340 |
| MunI | CAATTG | 1 cut(s) | 1023 |
| Mva1269I | GAATGC | 3 cut(s) | 534, 820, 2398 |
| MvaI | CCWGG | 3 cut(s) | 870, 2197, 2340 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 772, 776, 980, 1901, 2315 |
| NciI | CCSGG | 2 cut(s) | 49, 273 |
| NdeI | CATATG | 1 cut(s) | 2454 |
| NdeII | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| NheI | GCTAGC | 1 cut(s) | 2305 |
| NlaIV | GGNNCC | 5 cut(s) | 816, 849, 1020, 1050, 2505 |
| NmuCI | GTSAC | 7 cut(s) | 80, 615, 709, 1162, 1360, 1626, 1921 |
| NsiI | ATGCAT | 2 cut(s) | 682, 2265 |
| NspI | RCATGY | 6 cut(s) | 770, 914, 1563, 1774, 1935, 1944 |
| NspV | TTCGAA | 2 cut(s) | 672, 1215 |
| OliI | CACNNNNGTG | 2 cut(s) | 431, 1497 |
| PaeI | GCATGC | 1 cut(s) | 770 |
| PaqCI | CACCTGC | 1 cut(s) | 1229 |
| PciI | ACATGT | 4 cut(s) | 1559, 1770, 1931, 1940 |
| PciSI | GCTCTTC | 1 cut(s) | 2130 |
| PctI | GAATGC | 3 cut(s) | 534, 820, 2398 |
| PfeI | GAWTC | 6 cut(s) | 280, 1511, 1634, 1805, 1871, 2021 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 75 |
| PkrI | GCNGC | 8 cut(s) | 34, 700, 982, 985, 1103, 1159, 1326, 2206 |
| PleI | GAGTC | 2 cut(s) | 881, 1285 |
| PpsI | GAGTC | 2 cut(s) | 881, 1285 |
| PscI | ACATGT | 4 cut(s) | 1559, 1770, 1931, 1940 |
| Psp6I | CCWGG | 3 cut(s) | 868, 2195, 2338 |
| PspEI | GGTNACC | 1 cut(s) | 1626 |
| PspGI | CCWGG | 3 cut(s) | 868, 2195, 2338 |
| PspN4I | GGNNCC | 5 cut(s) | 816, 849, 1020, 1050, 2505 |
| PspPI | GGNCC | 5 cut(s) | 66, 661, 814, 872, 1019 |
| PstI | CTGCAG | 4 cut(s) | 750, 1162, 1813, 2209 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2518 |
| PsuI | RGATCY | 1 cut(s) | 1813 |
| PvuII | CAGCTG | 2 cut(s) | 983, 2532 |
| RsaI | GTAC | 7 cut(s) | 488, 644, 806, 1912, 2049, 2231, 2481 |
| RsaNI | GTAC | 7 cut(s) | 487, 643, 805, 1911, 2048, 2230, 2480 |
| RseI | CAYNNNNRTG | 3 cut(s) | 431, 959, 1497 |
| SalI | GTCGAC | 1 cut(s) | 622 |
| SapI | GCTCTTC | 1 cut(s) | 2130 |
| SaqAI | TTAA | 7 cut(s) | 189, 261, 312, 797, 860, 1827, 2217 |
| SatI | GCNGC | 8 cut(s) | 33, 699, 981, 984, 1102, 1158, 1325, 2205 |
| Sau3AI | GATC | 8 cut(s) | 217, 423, 478, 832, 1813, 2086, 2288, 2520 |
| Sau96I | GGNCC | 5 cut(s) | 66, 661, 814, 872, 1019 |
| SchI | GAGTC | 2 cut(s) | 881, 1286 |
| ScrFI | CCNGG | 5 cut(s) | 49, 273, 870, 2197, 2340 |
| SduI | GDGCHC | 3 cut(s) | 350, 438, 2476 |
| SexAI | ACCWGGT | 1 cut(s) | 2338 |
| SfaNI | GCATC | 5 cut(s) | 373, 667, 2250, 2272, 2305 |
| SfcI | CTRYAG | 4 cut(s) | 746, 1158, 1809, 2205 |
| SfuI | TTCGAA | 2 cut(s) | 672, 1215 |
| SinI | GGWCC | 3 cut(s) | 66, 872, 1019 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 431, 959, 1497 |
| SmlI | CTYRAG | 1 cut(s) | 2447 |
| SmoI | CTYRAG | 1 cut(s) | 2447 |
| SphI | GCATGC | 1 cut(s) | 770 |
| Sse9I | AATT | 9 cut(s) | 354, 1023, 1058, 1218, 1344, 1530, 1750, 2041, 2177 |
| SsiI | CCGC | 7 cut(s) | 33, 206, 359, 760, 818, 1101, 1324 |
| SspMI | CTAG | 6 cut(s) | 249, 1338, 1716, 1887, 2286, 2306 |
| StyD4I | CCNGG | 5 cut(s) | 47, 271, 868, 2195, 2338 |
| TaaI | ACNGT | 8 cut(s) | 86, 401, 443, 621, 1382, 1622, 1857, 2323 |
| TaqI | TCGA | 5 cut(s) | 623, 672, 1215, 1937, 2036 |
| TasI | AATT | 9 cut(s) | 354, 1023, 1058, 1218, 1344, 1530, 1750, 2041, 2177 |
| TatI | WGTACW | 3 cut(s) | 486, 804, 2479 |
| TauI | GCSGC | 3 cut(s) | 35, 1104, 1327 |
| TfiI | GAWTC | 6 cut(s) | 280, 1511, 1634, 1805, 1871, 2021 |
| Tru1I | TTAA | 7 cut(s) | 189, 261, 312, 797, 860, 1827, 2217 |
| Tru9I | TTAA | 7 cut(s) | 189, 261, 312, 797, 860, 1827, 2217 |
| TscAI | CASTG | 7 cut(s) | 755, 1084, 1167, 1405, 2104, 2240, 2426 |
| TseFI | GTSAC | 7 cut(s) | 80, 615, 709, 1162, 1360, 1626, 1921 |
| TseI | GCWGC | 5 cut(s) | 698, 980, 983, 1157, 2204 |
| Tsp45I | GTSAC | 7 cut(s) | 80, 615, 709, 1162, 1360, 1626, 1921 |
| TspDTI | ATGAA | 7 cut(s) | 813, 830, 1053, 1364, 1710, 2190, 2270 |
| TspRI | CASTG | 7 cut(s) | 755, 1084, 1167, 1405, 2104, 2240, 2426 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 75 |
| VpaK11BI | GGWCC | 3 cut(s) | 66, 872, 1019 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| XapI | RAATTY | 3 cut(s) | 1058, 1218, 2041 |
| XbaI | TCTAGA | 1 cut(s) | 2285 |
| XceI | RCATGY | 6 cut(s) | 770, 914, 1563, 1774, 1935, 1944 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1059, 1405 |
| XmiI | GTMKAC | 1 cut(s) | 623 |
| XspI | CTAG | 6 cut(s) | 249, 1338, 1716, 1887, 2286, 2306 |
| Zsp2I | ATGCAT | 2 cut(s) | 682, 2265 |