Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006527

Physical Location & Seq

Genomic Coordinates Forward (+)

27271317 .. 27277581

Gene Structure 6265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25541.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGATTCTTACAGACCGCACCAGCAGCAGTACATGAGGCCACCACCGCCACCACCACCACCACCGGCCACGTCGGATCCCTACCACTACCAGCAGCAACAACAACCACCGCCTCCGCCAAGACCACCACTCCCTCAGCAGGGCGCGTGGTACTCGAACCCGAACCAGAACCAGTACCAGTACCACTCATTACAGTCCCCGTCGCCTCCTCCACCGCAGCAGCAGCAGTGGGGCCCGCCACCTCACGCCGAACACCTACCTCCCCCGCCGGGCTCTTACGCTCCTCCACCGCCTTATTACCATCCTCAATCTCGCCCTCACGGACCTCCTCCTCCTCCTCCTCCCCCTCCTCAGTCTTATCATCCTCAGCAGCTCAATCAGGACTGGGGAGCTCAGAGTCGGCAAGGTTGGGATTACCCTATGCATAACAATGAACAAGATTGGGCAGCCAAGGCTAGGGCATGGGCAGCTAGGACGGCAATGGAGAACCAGGATCAGCAACCACAGTTTACTCCAGCTGGCAGACCAGAAGAACAAACTCATTATCATGAGCAGTATCCTCAAAATCAGCTCCAGTCTCTATCTGCATCTAGTTATCAACAGGTTCTGGTTTCAGGGACACCAACTCACCGCCCACCGGGAATGCATCCTCAGGACACGAACTTTATCGGCTCTGAACCATCTCCATATGGACATCATACTGTCAGATCTGCAATTCCATCTGTTCATCAGCAGGAGGTACCTTCTAGTTATTCTTCTGTTCCAGGTCAGGAAGGACAACCTCATATGCAACAAGCAATACCGTTCGGATATGGCAGTCATTCTGCAGATCCAGCAACCAATCCTGCTGACCAGCCTTTAGAATTTGCATCTGGGTTTTCTTCTGATCATGGCGCTCACGCATCCAGCTATCCTTATCATGATTCAGTTGGAAGTATACGAGGTGTGGACCCTGCTACGGCAGTTCCTTCCATGAATTCTTGGACTGTTTCTGTTGCACCTGGTGTGGTGTATCCTCCTACTCTTCCAGTTCTACCATCAGGACCACAGCATGATCCTTCTATGTCAATACCCTCTCCGGTCCCTGGAAATGCTCCACATTCATTTGGTAGTTTTCCTGGATTGAGCCTCCAGCCAACAATTCCAACCACTGGTCCTCCCTTTGCTCTCACTGCAGGAACTGCTGGTCATCCTACTGTGGCCTTCCCTGGTGATGCATATGGAGTTTCTATGATTTCTGAGCGCCCAAAGAAGGCTTCAGTGCCTAATTGGCTTAGAGAAGAAATTAAGAAAGTAAGCATCACAAGTTCGACCATGGACCATCTCAAGGAGGAAACGCAGTCTGTTGAGGATGAAGGTGTTGACAGATCTTTTGGGAAGGGTGATCAAGCCGATAGCAAAAGCATTGATTCTTCTAGATCAACTGAAGAAGAGGATGATGAGGATGAGGTGGAGGCAGCTCGGACTGCAGCAATTAACAAGGAAATAAAGCGTATCCTAACTGAAGTTCTCTCAACGGTTACTGATGAGCTCTTTGATGAAATTGCTACAAAAGTTCTTAGTGAAGATGATCTAACATCTGAAGTTGGACAGGGCAGACTCCCATCAAACCATAAGGTGTTGCCATCTTCCACAGTAGTTTCAGCTGGCAAGGCTTCTGCGAAGCTTGTAATTCCCGCCAAGAGTGGGGATTCTGAGACTGAAGATGTCAGTGAAAAATCTAGCTCCAGTACACCTGGCGATATATTGGGTCTTGCAAATTATGCTACTGATGATGACGACGACGATGATGGAGGTGGTGAAATTCCGAGTTCTGGTGACCCAAAATCTGGGAAAGATCAGTTTACTGTCAGAAACCCTCATGAGTCGCATGATGCCACTACAAATGGCAATTCTCCAGTAGAGCTTGAAGAGCATAGGAGAAGTCGAACAAGTTTGCCGAATGATCTGAGCAAGAGTGATACTAGTTATAATAAAAACAAGAGTGGGGTAAGTAATGTTGAACCTGAACTGCCCATGGAAAATGTTAATGTCAAAAAGATAGCAAAAGATGACCCACAAAGTAGGGAGTCCAGGATGAAACCAGATAAGCATGATCGACATGATAGTAAAAGGAGTTCTTTGAAAGAAAATAAGGAGATAGAAAGTGGTAAGATTAGGACAGACGAGAAAGGTGATGAGAATTGTAGGAGGCATGATGAGAGGCCTTTGAGAAAGGAAAGGACTGATGATCGCAATGGTTCAAAAGAAAGGTTCAAAGACCAAAATGTTATGTCTGGAGATAAATCAAAGGAATCTGATTCAAGAAAAAGGTCATCCCATGCTGATGTCCTGGAGGACAAAAGAGAAACAGATAGACTCCATAGAGATAGTTCTAAAGCAGATGTGAGCAGAAAAAGAGAACGAACAGATAATAAGGAGGATGATAGATCAAGACATAAATATTCTACTGACTCAAGCAGGCACAAGAGAAGGCACTCCTCTTCCATTGACAGCAAGGACAACACCGTTAATCATGCCAATCATTCAAGTAATGAATCTTCTGAGGATTCTAAAAGGAAGCTACATTCAAGGAGACGTCACTCATCACCTTCACCCGTCAGATCTAGGAGAAGGGGGAAAGGGTCAAGGTCCAGATCACCTGTGCGGCGACACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006486 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0035250 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4228 Nucleotid_trans PNISR

Protein Analysis

887

Amino Acids

98.06

Weight (kDa)

6.24

Isoelectric Point (pI)

79.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620
fragaria_vesca	FvH4_4g25541
malus_domestica	MD13G1101700.v1.1 MD16G1102300.v1.1
prunus_persica	Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1
pyrus_communis	pycom13g08880 pycom16g08690
rosa_chinensis	RchiOBHm_Chr4g0432951
rosa_multiflora	Rmu_sc0001762.1_g000045
rosa_rugosa	Rorug04G0264300
rosa_samantha	Rh4AG318100 Rh4BG326200 Rh4CG341500 Rh4DG321400
rosa_wichuraiana	Rw4G027660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1971
AatII	GACGTC	1 cut(s)	2581
Acc65I	GGTACC	1 cut(s)	739
AccB1I	GGYRCC	1 cut(s)	739
AccB7I	CCANNNNNTGG	2 cut(s)	1151, 1829
AccI	GTMKAC	1 cut(s)	937
AccII	CGCG	1 cut(s)	146
AclWI	GGATC	5 cut(s)	71, 84, 501, 824, 1049
AcoI	YGGCCR	1 cut(s)	66
AcsI	RAATTY	3 cut(s)	863, 976, 1803
AcuI	CTGAAG	5 cut(s)	1242, 1446, 1524, 1602, 1722
AcyI	GRCGYC	1 cut(s)	2578
AdeI	CACNNNGTG	1 cut(s)	1004
AfaI	GTAC	6 cut(s)	32, 152, 176, 182, 741, 1732
AgsI	TTSAA	8 cut(s)	1910, 2003, 2125, 2244, 2257, 2304, 2529, 2571
AhlI	ACTAGT	1 cut(s)	1964
AjiI	CACGTC	1 cut(s)	72
AjnI	CCWGG	9 cut(s)	489, 763, 1000, 1084, 1117, 1207, 1735, 2072, 2331
AjuI	GAANNNNNNNTTGG	2 cut(s)	1240, 1272
Alw21I	GWGCWC	2 cut(s)	394, 1533
Alw26I	GTCTC	3 cut(s)	582, 1691, 2569
AlwI	GGATC	5 cut(s)	71, 84, 501, 824, 1049
AlwNI	CAGNNNCTG	2 cut(s)	607, 1181
AoxI	GGCC	5 cut(s)	38, 66, 232, 1200, 2204
ApaI	GGGCCC	1 cut(s)	236
ApoI	RAATTY	3 cut(s)	863, 976, 1803
ArsI	GACNNNNNNTTYG	2 cut(s)	1355, 1387
Asp718I	GGTACC	1 cut(s)	739
AspLEI	GCGC	3 cut(s)	146, 896, 1245
AspS9I	GGNCC	9 cut(s)	232, 233, 323, 949, 1043, 1081, 1154, 1318, 2631
AsuC2I	CCSGG	2 cut(s)	270, 639
AsuHPI	GGTGA	9 cut(s)	620, 1223, 1394, 1811, 1829, 2186, 2580, 2586, 2631
AvaII	GGWCC	7 cut(s)	323, 949, 1043, 1081, 1154, 1318, 2631
AxyI	CCTNAGG	1 cut(s)	651
BaeGI	GKGCMC	1 cut(s)	236
BamHI	GGATCC	1 cut(s)	76
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	4 cut(s)	236, 275, 394, 1533
BarI	GAAGNNNNNNTAC	2 cut(s)	2524, 2556
Bbv12I	GWGCWC	2 cut(s)	394, 1533
BbvCI	CCTCAGC	2 cut(s)	135, 366
BccI	CCATC	8 cut(s)	309, 688, 727, 1045, 1329, 1612, 1633, 1784
BceAI	ACGGC	2 cut(s)	492, 975
BciT130I	CCWGG	9 cut(s)	491, 765, 1002, 1086, 1119, 1209, 1737, 2074, 2333
BciVI	GTATCC	3 cut(s)	567, 1023, 1505
BclI	TGATCA	2 cut(s)	886, 1384
BcnI	CCSGG	2 cut(s)	270, 639
BcoDI	GTCTC	3 cut(s)	582, 1691, 2569
BcuI	ACTAGT	1 cut(s)	1964
BfaI	CTAG	8 cut(s)	456, 471, 591, 747, 1416, 1722, 1965, 2607
BfmI	CTRYAG	3 cut(s)	825, 1173, 1467
BfoI	RGCGCY	2 cut(s)	897, 1246
BfuI	GTATCC	3 cut(s)	567, 1023, 1505
BglI	GCCNNNNNGGC	1 cut(s)	1270
BglII	AGATCT	3 cut(s)	707, 1367, 2603
Bme18I	GGWCC	7 cut(s)	323, 949, 1043, 1081, 1154, 1318, 2631
BmgBI	CACGTC	1 cut(s)	72
BmgT120I	GGNCC	9 cut(s)	232, 233, 323, 949, 1043, 1081, 1154, 1318, 2631
BmiI	GGNNCC	6 cut(s)	78, 233, 234, 741, 951, 1083
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	7 cut(s)	596, 655, 878, 911, 1204, 1308, 1864
BmuI	ACTGGG	1 cut(s)	394
BpmI	CTGGAG	7 cut(s)	498, 557, 1115, 1711, 1881, 2298, 2354
Bpu10I	CCTNAGC	2 cut(s)	135, 366
BpuEI	CTTGAG	2 cut(s)	1310, 2440
BpuMI	CCSGG	2 cut(s)	270, 639
BsaHI	GRCGYC	1 cut(s)	2578
BsaJI	CCNNGG	5 cut(s)	450, 1084, 1207, 1314, 2016
BsaWI	WCCGGW	1 cut(s)	1078
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 1141, 1171
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	8 cut(s)	172, 178, 389, 574, 1028, 1156, 1728, 1898
Bse21I	CCTNAGG	1 cut(s)	651
Bse3DI	GCAATG	2 cut(s)	486, 2242
BseBI	CCWGG	9 cut(s)	491, 765, 1002, 1086, 1119, 1209, 1737, 2074, 2333
BseDI	CCNNGG	5 cut(s)	450, 1084, 1207, 1314, 2016
BseMI	GCAATG	2 cut(s)	486, 2242
BseMII	CTCAG	9 cut(s)	149, 365, 380, 407, 665, 1230, 1686, 1940, 2535
BseNI	ACTGG	8 cut(s)	172, 178, 389, 574, 1028, 1156, 1728, 1898
BseRI	GAGGAG	9 cut(s)	198, 273, 318, 321, 324, 327, 330, 339, 2470
BseSI	GKGCMC	1 cut(s)	236
Bsh1236I	CGCG	1 cut(s)	146
BshFI	GGCC	5 cut(s)	40, 68, 234, 1202, 2206
BshNI	GGYRCC	1 cut(s)	739
BsiHKAI	GWGCWC	2 cut(s)	394, 1533
BsiSI	CCGG	4 cut(s)	65, 269, 638, 1079
BslFI	GGGAC	3 cut(s)	181, 631, 1067
BsmAI	GTCTC	3 cut(s)	582, 1691, 2569
BsmBI	CGTCTC	1 cut(s)	2569
BsmFI	GGGAC	3 cut(s)	181, 631, 1067
BsmI	GAATGC	1 cut(s)	648
BsnI	GGCC	5 cut(s)	40, 68, 234, 1202, 2206
Bsp120I	GGGCCC	1 cut(s)	232
Bsp1286I	GDGCHC	4 cut(s)	236, 275, 394, 1533
Bsp19I	CCATGG	2 cut(s)	1314, 2016
BspANI	GGCC	5 cut(s)	40, 68, 234, 1202, 2206
BspCNI	CTCAG	9 cut(s)	148, 364, 379, 406, 664, 1231, 1687, 1941, 2536
BspFNI	CGCG	1 cut(s)	146
BspHI	TCATGA	3 cut(s)	547, 919, 1861
BspLI	GGNNCC	6 cut(s)	78, 233, 234, 741, 951, 1083
BspMAI	CTGCAG	3 cut(s)	829, 1177, 1471
BspPI	GGATC	5 cut(s)	71, 84, 501, 824, 1049
BspQI	GCTCTTC	1 cut(s)	1905
BspT107I	GGYRCC	1 cut(s)	739
BsrDI	GCAATG	2 cut(s)	486, 2242
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	8 cut(s)	172, 178, 389, 574, 1028, 1156, 1728, 1898
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	5 cut(s)	450, 1084, 1207, 1314, 2016
BssNAI	GTATAC	1 cut(s)	938
BssNI	GRCGYC	1 cut(s)	2578
BssT1I	CCWWGG	3 cut(s)	450, 1314, 2016
Bst1107I	GTATAC	1 cut(s)	938
Bst2UI	CCWGG	9 cut(s)	491, 765, 1002, 1086, 1119, 1209, 1737, 2074, 2333
Bst6I	CTCTTC	4 cut(s)	1029, 1425, 1905, 2488
BstACI	GRCGYC	1 cut(s)	2578
BstAPI	GCANNNNNTGC	2 cut(s)	1181, 1763
BstC8I	GCNNGC	4 cut(s)	236, 520, 1648, 2462
BstDSI	CCRYGG	2 cut(s)	1314, 2016
BstEII	GGTNACC	1 cut(s)	1817
BstFNI	CGCG	1 cut(s)	146
BstH2I	RGCGCY	2 cut(s)	897, 1246
BstHHI	GCGC	3 cut(s)	146, 896, 1245
BstMAI	GTCTC	3 cut(s)	582, 1691, 2569
BstNI	CCWGG	9 cut(s)	491, 765, 1002, 1086, 1119, 1209, 1737, 2074, 2333
BstPI	GGTNACC	1 cut(s)	1817
BstSFI	CTRYAG	3 cut(s)	825, 1173, 1467
BstSLI	GKGCMC	1 cut(s)	236
BstUI	CGCG	1 cut(s)	146
BstX2I	RGATCY	5 cut(s)	76, 707, 829, 1367, 2603
BstYI	RGATCY	5 cut(s)	76, 707, 829, 1367, 2603
BstZ17I	GTATAC	1 cut(s)	938
Bsu36I	CCTNAGG	1 cut(s)	651
BsuI	GTATCC	3 cut(s)	567, 1023, 1505
BsuRI	GGCC	5 cut(s)	40, 68, 234, 1202, 2206
BtgI	CCRYGG	2 cut(s)	1314, 2016
BtrI	CACGTC	1 cut(s)	72
BtsI	GCAGTG	2 cut(s)	233, 1170
BtsIMutI	CAGTG	5 cut(s)	233, 1149, 1170, 1266, 1717
Cac8I	GCNNGC	4 cut(s)	236, 520, 1648, 2462
CaiI	CAGNNNCTG	2 cut(s)	607, 1181
CciI	TCATGA	3 cut(s)	547, 919, 1861
CfoI	GCGC	3 cut(s)	146, 896, 1245
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	9 cut(s)	232, 233, 323, 949, 1043, 1081, 1154, 1318, 2631
CsiI	ACCWGGT	1 cut(s)	1000
Csp6I	GTAC	6 cut(s)	31, 151, 175, 181, 740, 1731
CviQI	GTAC	6 cut(s)	31, 151, 175, 181, 740, 1731
DraIII	CACNNNGTG	1 cut(s)	1004
EaeI	YGGCCR	1 cut(s)	66
Eam1104I	CTCTTC	4 cut(s)	1029, 1425, 1905, 2488
EarI	CTCTTC	4 cut(s)	1029, 1425, 1905, 2488
EciI	GGCGGA	1 cut(s)	105
Ecl136II	GAGCTC	2 cut(s)	392, 1531
Eco130I	CCWWGG	3 cut(s)	450, 1314, 2016
Eco147I	AGGCCT	1 cut(s)	2206
Eco24I	GRGCYC	4 cut(s)	236, 275, 394, 1533
Eco47I	GGWCC	7 cut(s)	323, 949, 1043, 1081, 1154, 1318, 2631
Eco53kI	GAGCTC	2 cut(s)	392, 1531
Eco57I	CTGAAG	5 cut(s)	1242, 1446, 1524, 1602, 1722
Eco81I	CCTNAGG	1 cut(s)	651
Eco91I	GGTNACC	1 cut(s)	1817
EcoICRI	GAGCTC	2 cut(s)	392, 1531
EcoO109I	RGGNCCY	1 cut(s)	232
EcoO65I	GGTNACC	1 cut(s)	1817
EcoRI	GAATTC	1 cut(s)	976
EcoRII	CCWGG	9 cut(s)	489, 763, 1000, 1084, 1117, 1207, 1735, 2072, 2331
EcoT14I	CCWWGG	3 cut(s)	450, 1314, 2016
EcoT22I	ATGCAT	3 cut(s)	426, 648, 1219
EcoT38I	GRGCYC	4 cut(s)	236, 275, 394, 1533
ErhI	CCWWGG	3 cut(s)	450, 1314, 2016
Esp3I	CGTCTC	1 cut(s)	2569
FalI	AAGNNNNNCTT	2 cut(s)	2104, 2136
FaqI	GGGAC	3 cut(s)	181, 631, 1067
FauI	CCCGC	3 cut(s)	243, 273, 1684
FauNDI	CATATG	3 cut(s)	688, 786, 1219
FbaI	TGATCA	2 cut(s)	886, 1384
FblI	GTMKAC	1 cut(s)	937
FriOI	GRGCYC	4 cut(s)	236, 275, 394, 1533
FspBI	CTAG	8 cut(s)	456, 471, 591, 747, 1416, 1722, 1965, 2607
GlaI	GCGC	3 cut(s)	145, 895, 1244
GsuI	CTGGAG	7 cut(s)	498, 557, 1115, 1711, 1881, 2298, 2354
HaeII	RGCGCY	2 cut(s)	897, 1246
HaeIII	GGCC	5 cut(s)	40, 68, 234, 1202, 2206
HapII	CCGG	4 cut(s)	65, 269, 638, 1079
HhaI	GCGC	3 cut(s)	146, 896, 1245
Hin1I	GRCGYC	1 cut(s)	2578
Hin6I	GCGC	3 cut(s)	144, 894, 1243
HinP1I	GCGC	3 cut(s)	144, 894, 1243
HincII	GTYRAC	1 cut(s)	1363
HindII	GTYRAC	1 cut(s)	1363
HindIII	AAGCTT	1 cut(s)	1664
HpaII	CCGG	4 cut(s)	65, 269, 638, 1079
HphI	GGTGA	9 cut(s)	620, 1223, 1394, 1811, 1829, 2186, 2580, 2586, 2631
Hpy166II	GTNNAC	6 cut(s)	510, 938, 949, 1363, 1733, 1845
Hpy8I	GTNNAC	6 cut(s)	510, 938, 949, 1363, 1733, 1845
Hpy99I	CGWCG	4 cut(s)	76, 205, 1784, 1787
HpyCH4IV	ACGT	2 cut(s)	71, 2578
HpySE526I	ACGT	2 cut(s)	71, 2578
Hsp92I	GRCGYC	1 cut(s)	2578
HspAI	GCGC	3 cut(s)	144, 894, 1243
KpnI	GGTACC	1 cut(s)	743
Ksp22I	TGATCA	2 cut(s)	886, 1384
LguI	GCTCTTC	1 cut(s)	1905
LmnI	GCTCC	5 cut(s)	286, 389, 576, 1099, 1730
LweI	GCATC	7 cut(s)	596, 655, 878, 911, 1204, 1308, 1864
MabI	ACCWGGT	1 cut(s)	1000
MaeI	CTAG	8 cut(s)	456, 471, 591, 747, 1416, 1722, 1965, 2607
MaeII	ACGT	2 cut(s)	71, 2578
MaeIII	GTNAC	3 cut(s)	1519, 1817, 2579
MflI	RGATCY	5 cut(s)	76, 707, 829, 1367, 2603
MhlI	GDGCHC	4 cut(s)	236, 275, 394, 1533
MlyI	GAGTC	6 cut(s)	406, 1593, 1874, 2078, 2352, 2447
MmeI	TCCRAC	4 cut(s)	54, 910, 1169, 1567
Mph1103I	ATGCAT	3 cut(s)	426, 648, 1219
MseI	TTAA	4 cut(s)	1287, 1476, 2028, 2511
MslI	CAYNNNNRTG	3 cut(s)	429, 546, 2325
MspA1I	CMGCKG	2 cut(s)	518, 1646
MspI	CCGG	4 cut(s)	65, 269, 638, 1079
Mva1269I	GAATGC	1 cut(s)	648
MvaI	CCWGG	9 cut(s)	491, 765, 1002, 1086, 1119, 1209, 1737, 2074, 2333
MvnI	CGCG	1 cut(s)	146
NciI	CCSGG	2 cut(s)	270, 639
NcoI	CCATGG	2 cut(s)	1314, 2016
NdeI	CATATG	3 cut(s)	688, 786, 1219
NlaIV	GGNNCC	6 cut(s)	78, 233, 234, 741, 951, 1083
NmuCI	GTSAC	2 cut(s)	1817, 2579
NsiI	ATGCAT	3 cut(s)	426, 648, 1219
PagI	TCATGA	3 cut(s)	547, 919, 1861
PceI	AGGCCT	1 cut(s)	2206
PciSI	GCTCTTC	1 cut(s)	1905
PctI	GAATGC	1 cut(s)	648
PfeI	GAWTC	8 cut(s)	5, 923, 1409, 1691, 2294, 2300, 2537, 2549
PflMI	CCANNNNNTGG	2 cut(s)	1151, 1829
PfoI	TCCNGGA	3 cut(s)	1117, 2072, 2331
PleI	GAGTC	6 cut(s)	405, 1593, 1873, 2077, 2352, 2447
PpsI	GAGTC	6 cut(s)	405, 1593, 1873, 2077, 2352, 2447
PsiI	TTATAA	1 cut(s)	1971
Psp124BI	GAGCTC	2 cut(s)	394, 1533
Psp6I	CCWGG	9 cut(s)	489, 763, 1000, 1084, 1117, 1207, 1735, 2072, 2331
PspEI	GGTNACC	1 cut(s)	1817
PspGI	CCWGG	9 cut(s)	489, 763, 1000, 1084, 1117, 1207, 1735, 2072, 2331
PspN4I	GGNNCC	6 cut(s)	78, 233, 234, 741, 951, 1083
PspOMI	GGGCCC	1 cut(s)	232
PspPI	GGNCC	9 cut(s)	232, 233, 323, 949, 1043, 1081, 1154, 1318, 2631
PsrI	GAACNNNNNNTAC	2 cut(s)	2101, 2133
PstI	CTGCAG	3 cut(s)	829, 1177, 1471
PstNI	CAGNNNCTG	2 cut(s)	607, 1181
PsuI	RGATCY	5 cut(s)	76, 707, 829, 1367, 2603
PvuII	CAGCTG	2 cut(s)	518, 1646
RsaI	GTAC	6 cut(s)	32, 152, 176, 182, 741, 1732
RsaNI	GTAC	6 cut(s)	31, 151, 175, 181, 740, 1731
RseI	CAYNNNNRTG	3 cut(s)	429, 546, 2325
SacI	GAGCTC	2 cut(s)	394, 1533
SapI	GCTCTTC	1 cut(s)	1905
SaqAI	TTAA	4 cut(s)	1287, 1476, 2028, 2511
Sau96I	GGNCC	9 cut(s)	232, 233, 323, 949, 1043, 1081, 1154, 1318, 2631
SchI	GAGTC	6 cut(s)	406, 1593, 1874, 2078, 2352, 2447
SduI	GDGCHC	4 cut(s)	236, 275, 394, 1533
SexAI	ACCWGGT	1 cut(s)	1000
SfaNI	GCATC	7 cut(s)	596, 655, 878, 911, 1204, 1308, 1864
SfcI	CTRYAG	3 cut(s)	825, 1173, 1467
SinI	GGWCC	7 cut(s)	323, 949, 1043, 1081, 1154, 1318, 2631
SmiMI	CAYNNNNRTG	3 cut(s)	429, 546, 2325
SmlI	CTYRAG	2 cut(s)	1325, 2455
SmoI	CTYRAG	2 cut(s)	1325, 2455
SpeI	ACTAGT	1 cut(s)	1964
SseBI	AGGCCT	1 cut(s)	2206
SspI	AATATT	1 cut(s)	2444
SspMI	CTAG	8 cut(s)	456, 471, 591, 747, 1416, 1722, 1965, 2607
SstI	GAGCTC	2 cut(s)	394, 1533
StuI	AGGCCT	1 cut(s)	2206
StyI	CCWWGG	3 cut(s)	450, 1314, 2016
TaiI	ACGT	2 cut(s)	74, 2581
TaqI	TCGA	4 cut(s)	155, 1310, 1927, 2098
TatI	WGTACW	2 cut(s)	30, 1730
TauI	GCSGC	1 cut(s)	2650
TfiI	GAWTC	8 cut(s)	5, 923, 1409, 1691, 2294, 2300, 2537, 2549
Tru1I	TTAA	4 cut(s)	1287, 1476, 2028, 2511
Tru9I	TTAA	4 cut(s)	1287, 1476, 2028, 2511
TscAI	CASTG	5 cut(s)	233, 1156, 1177, 1266, 1717
TseFI	GTSAC	2 cut(s)	1817, 2579
Tsp45I	GTSAC	2 cut(s)	1817, 2579
TspDTI	ATGAA	8 cut(s)	447, 716, 989, 1092, 1368, 1554, 2093, 2550
TspGWI	ACGGA	1 cut(s)	336
TspRI	CASTG	5 cut(s)	233, 1156, 1177, 1266, 1717
Van91I	CCANNNNNTGG	2 cut(s)	1151, 1829
VpaK11BI	GGWCC	7 cut(s)	323, 949, 1043, 1081, 1154, 1318, 2631
XapI	RAATTY	3 cut(s)	863, 976, 1803
XbaI	TCTAGA	1 cut(s)	1415
XmiI	GTMKAC	1 cut(s)	937
XspI	CTAG	8 cut(s)	456, 471, 591, 747, 1416, 1722, 1965, 2607
ZraI	GACGTC	1 cut(s)	2579
Zsp2I	ATGCAT	3 cut(s)	426, 648, 1219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.