Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0006527

Physical Location & Seq

Genomic Coordinates Forward (+)

60088384 .. 60092006

Gene Structure 3623 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG341500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGCAGGCAATGACGCTTCTGCAGAACTGAATGAGCACTCCTACAACTTCTTACCTGTGCCAAATTCCTCAGGTCAGGAAGGACAGCACCATATTCAACAATCCCATGCAATACCATTTGGATATGGCAGTCATTCTGCAGATCCAGCAACCAATCTTGCTGACCAGCCTTTAGAATTTGCATCTGGGTTTAATTCTGATCATGGTGCTCACGCATCCAGCTATCCTTATCATGATTCAGGTGGAAGTATAAGAGGTGTGGACCCTGCTACAACAGTTCCTTCCATGAATTCTTGGACTGTTTCTGTTGCACCTGGTGTGGTATATCCTCCTACCCTTCCAGTTCTACCATCAGGACCACAGCATGATCCTTCTATGACGATACCCTCTCCGGTCCCTGGAAATGCTCCACATTCATTTGGTAGTTTTCCTGGATTGAGCCTCCAGCCAACAATTCCAACCACTGGTCCTCCCTTTGCTCTCACTGCAGGAACTGCTGGTCATCCTACTGTGGCCTTCCCTGGTGATGCATACGGAGTTTCTACAATTTCTGAGCGCCCAAAAAAGGCTGCAGTGCCTAATTGGCTTAGAGAGGAAATTAAGAAAGTAAGCATCACAAATTCCACCATGGACCATCTCAAGGAGGAAACACAGTCTGTTGAGGATGAAGGTGTTGACAGATCTTTTGGGAAGGGTGATCACGCCGATAGCAAAAGCATTGATTCTTCTAGATCAACTGAAGAAGAGGATGATGAGGATGAGGTGGAGGCAGCTCGGACTGCAGCAATTAACAAGGAAATAAAGCGTATCCTAACTGAAGTTCTCTCAACGGTTACTGATGAGCTCTTTGATGAAATCGCAACAAAAGTTCTTAGTGAAGATGATCTAACATCTGAAGTTAGACAGGGCAGACTCCCATCAAACCATAAGGTATTGCCATCTACCCCAGCAGTTTCAGATGCCAAGGCTTCTGCTAAGCTTCTAATTCCAGTCAAGACTAGGGAATCTGAGACTGAAGATGTCGGTGAAAAATCTAGCTCCAGTACACCTGGTGATATATTGGGTCTTGCAAATTATGCTACTGATGATGACGACGATGATGATGATGGAGGTGGTGAAATTCCGAGTTCTGGTGTGCCAAAATCTGGGAAAGATCAGATTACTGTTAGAAAGCCTCATGAGTCGCATGATGCCACTGCAAATGGCAGTTCTCCAGTAGAGCTTGAAGAGCACAGGAGAAGTCAGACAAGTTTGCCGGATGATCTGAGCAAGAGTGATAATAGTTATAATAGAAACAAGAGTGAGGAAAGTAATGTTGATAAATATCTGCAAGATGGGACTACTGTGGAACCTGAACTATCTACGGAAAATGTTAATGTCAAAAGGACAGCAAAAAATGACCCACAAAGTAGGGAGTCCAGGATGAAGCCAGATAAGCATGATCGACATGAGAGTAAAAGGAGTTCTTTGAAAGAAAATAAGGAGGTAGACAGTAGTAAGATTAGGACAGACGAGAAGGGTGATGAGAATCGTAGGAGGCAGGATGAGAGGCCTCTGAGAAAGGAAAGGACAGATGATCGGAATGATTCAAAAGAAAAGATCAAAGACCAAAATGTTAAGCCTGGAGATAAAGCAAAGGAATCTGATTCAAGAAAAAGGTCTTCCCATGTTGATGTTGACGAGGACAAAAGAGAAACAGATAGACTCCGTAGAGATAGTTCTAAAGAAGATGTGAGCAGAAAAAGAGAACGAACAAAGAATAAGGAGGATGATAGATCAAGACGTAAACATTCTACTGACTCAAGCAGGCACAAGAGAAGGCGCTCCTCTTCCATTGACAGCAAGGATAACTCGGTTAATCATGCCAATCATTCAAGTGATGAATCTTCTGAGGATTCTAAAAGGAAGGTACATTCAAGGAGACGTCACTCATCACGTTCACCTGTCAGGTCTAGGAGAAGACAAGTTTCGCGGTCTCCACATAGCAAGCATTCTCAGCGCAGGCATTCTCCCTACTCTTCTCTTGATAGCAACAGGGGGAAAGGGTCAAGATCCAGATCACCTGTGCGGCGGCAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006486 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0035250 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4228 Nucleotid_trans PNISR

Protein Analysis

693

Amino Acids

76.66

Weight (kDa)

6.38

Isoelectric Point (pI)

74.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620 AT1G70620
fragaria_vesca	FvH4_4g25541
malus_domestica	MD13G1101700.v1.1 MD16G1102300.v1.1
prunus_persica	Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1 Prupe.1G244100_v2.0.a1
pyrus_communis	pycom13g08880 pycom16g08690
rosa_chinensis	RchiOBHm_Chr4g0432951
rosa_multiflora	Rmu_sc0001762.1_g000045
rosa_rugosa	Rorug04G0264300
rosa_samantha	Rh4AG318100 Rh4BG326200 Rh4CG341500 Rh4DG321400
rosa_wichuraiana	Rw4G027660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
AatII	GACGTC	1 cut(s)	1927
AccB7I	CCANNNNNTGG	2 cut(s)	464, 1145
AccI	GTMKAC	1 cut(s)	1488
AccII	CGCG	1 cut(s)	1972
AciI	CCGC	3 cut(s)	1972, 2068, 2071
AclWI	GGATC	3 cut(s)	137, 362, 2046
AcsI	RAATTY	5 cut(s)	64, 176, 289, 619, 1119
AcuI	CTGAAG	4 cut(s)	759, 837, 915, 1035
AcyI	GRCGYC	1 cut(s)	1924
AdeI	CACNNNGTG	2 cut(s)	317, 1052
AfaI	GTAC	2 cut(s)	1045, 1911
AfiI	CCNNNNNNNGG	6 cut(s)	398, 464, 565, 640, 1130, 1145
AgsI	TTSAA	7 cut(s)	98, 1226, 1471, 1590, 1650, 1875, 1917
AjnI	CCWGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
AluBI	AGCT	6 cut(s)	222, 773, 844, 979, 1038, 1222
AluI	AGCT	6 cut(s)	222, 773, 844, 979, 1038, 1222
Alw21I	GWGCWC	4 cut(s)	39, 211, 846, 1233
Alw26I	GTCTC	3 cut(s)	1004, 1915, 1980
AlwI	GGATC	3 cut(s)	137, 362, 2046
AlwNI	CAGNNNCTG	1 cut(s)	494
AoxI	GGCC	2 cut(s)	513, 1550
ApeKI	GCWGC	3 cut(s)	569, 770, 782
ApoI	RAATTY	5 cut(s)	64, 176, 289, 619, 1119
ArsI	GACNNNNNNTTYG	2 cut(s)	668, 700
AspLEI	GCGC	3 cut(s)	558, 1824, 2001
AspS9I	GGNCC	5 cut(s)	262, 356, 394, 467, 631
AsuHPI	GGTGA	8 cut(s)	536, 707, 1037, 1064, 1127, 1532, 1932, 2052
AvaII	GGWCC	5 cut(s)	262, 356, 394, 467, 631
AxyI	CCTNAGG	1 cut(s)	70
BanII	GRGCYC	1 cut(s)	846
BbsI	GAAGAC	2 cut(s)	1653, 1966
Bbv12I	GWGCWC	4 cut(s)	39, 211, 846, 1233
BbvI	GCAGC	3 cut(s)	556, 782, 794
BccI	CCATC	6 cut(s)	358, 642, 925, 946, 1100, 1328
BciT130I	CCWGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
BciVI	GTATCC	1 cut(s)	818
BclI	TGATCA	2 cut(s)	199, 697
BcoDI	GTCTC	3 cut(s)	1004, 1915, 1980
BfaI	CTAG	4 cut(s)	729, 999, 1035, 1953
BfmI	CTRYAG	5 cut(s)	21, 138, 486, 570, 780
BfoI	RGCGCY	2 cut(s)	559, 1825
BfuI	GTATCC	1 cut(s)	818
BglI	GCCNNNNNGGC	1 cut(s)	583
BglII	AGATCT	1 cut(s)	680
BisI	GCNGC	5 cut(s)	570, 771, 783, 2069, 2072
BlpI	GCTNAGC	1 cut(s)	975
BlsI	GCNGC	5 cut(s)	571, 772, 784, 2070, 2073
Bme1390I	CCNGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
Bme18I	GGWCC	5 cut(s)	262, 356, 394, 467, 631
BmgT120I	GGNCC	5 cut(s)	262, 356, 394, 467, 631
BmiI	GGNNCC	3 cut(s)	264, 396, 1350
BmrFI	CCNGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
BmsI	GCATC	6 cut(s)	191, 224, 517, 621, 949, 1180
BpiI	GAAGAC	2 cut(s)	1653, 1966
BpmI	CTGGAG	4 cut(s)	428, 1024, 1197, 1644
Bpu1102I	GCTNAGC	1 cut(s)	975
BpuEI	CTTGAG	2 cut(s)	623, 1786
BsaBI	GATNNNNATC	3 cut(s)	1323, 1527, 2056
BsaHI	GRCGYC	1 cut(s)	1924
BsaI	GGTCTC	1 cut(s)	1980
BsaJI	CCNNGG	4 cut(s)	397, 520, 627, 963
BsaWI	WCCGGW	1 cut(s)	391
BsaXI	ACNNNNNCTCC	2 cut(s)	454, 484
Bsc4I	CCNNNNNNNGG	6 cut(s)	398, 464, 565, 640, 1130, 1145
Bse1I	ACTGG	5 cut(s)	341, 469, 989, 1041, 1214
Bse21I	CCTNAGG	1 cut(s)	70
Bse3DI	GCAATG	1 cut(s)	16
Bse8I	GATNNNNATC	3 cut(s)	1323, 1527, 2056
BseBI	CCWGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
BseDI	CCNNGG	4 cut(s)	397, 520, 627, 963
BseGI	GGATG	9 cut(s)	215, 502, 670, 754, 763, 1264, 1428, 1549, 1774
BseJI	GATNNNNATC	3 cut(s)	1323, 1527, 2056
BseLI	CCNNNNNNNGG	6 cut(s)	398, 464, 565, 640, 1130, 1145
BseMI	GCAATG	1 cut(s)	16
BseMII	CTCAG	7 cut(s)	84, 543, 999, 1256, 1547, 1881, 2009
BseNI	ACTGG	5 cut(s)	341, 469, 989, 1041, 1214
BseRI	GAGGAG	1 cut(s)	1816
BseXI	GCAGC	3 cut(s)	556, 782, 794
BseYI	CCCAGC	1 cut(s)	946
Bsh1236I	CGCG	1 cut(s)	1972
BshFI	GGCC	2 cut(s)	515, 1552
BsiHKAI	GWGCWC	4 cut(s)	39, 211, 846, 1233
BsiSI	CCGG	2 cut(s)	392, 1256
BslFI	GGGAC	2 cut(s)	380, 1351
BslI	CCNNNNNNNGG	6 cut(s)	398, 464, 565, 640, 1130, 1145
BsmAI	GTCTC	3 cut(s)	1004, 1915, 1980
BsmBI	CGTCTC	1 cut(s)	1915
BsmFI	GGGAC	2 cut(s)	380, 1351
BsmI	GAATGC	2 cut(s)	1990, 2005
BsnI	GGCC	2 cut(s)	515, 1552
Bso31I	GGTCTC	1 cut(s)	1980
Bsp1286I	GDGCHC	4 cut(s)	39, 211, 846, 1233
Bsp1720I	GCTNAGC	1 cut(s)	975
Bsp19I	CCATGG	1 cut(s)	627
BspACI	CCGC	3 cut(s)	1972, 2068, 2071
BspANI	GGCC	2 cut(s)	515, 1552
BspCNI	CTCAG	7 cut(s)	83, 544, 1000, 1257, 1548, 1882, 2008
BspFNI	CGCG	1 cut(s)	1972
BspHI	TCATGA	2 cut(s)	232, 1177
BspLI	GGNNCC	3 cut(s)	264, 396, 1350
BspMAI	CTGCAG	5 cut(s)	25, 142, 490, 574, 784
BspPI	GGATC	3 cut(s)	137, 362, 2046
BspQI	GCTCTTC	1 cut(s)	1221
BspTNI	GGTCTC	1 cut(s)	1980
BsrDI	GCAATG	1 cut(s)	16
BsrI	ACTGG	5 cut(s)	341, 469, 989, 1041, 1214
BssECI	CCNNGG	4 cut(s)	397, 520, 627, 963
BssNI	GRCGYC	1 cut(s)	1924
BssT1I	CCWWGG	2 cut(s)	627, 963
Bst2UI	CCWGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
Bst4CI	ACNGT	8 cut(s)	277, 301, 511, 654, 832, 1165, 1345, 1493
Bst6I	CTCTTC	4 cut(s)	738, 1221, 1834, 2023
BstACI	GRCGYC	1 cut(s)	1924
BstAPI	GCANNNNNTGC	2 cut(s)	494, 1076
BstC8I	GCNNGC	4 cut(s)	7, 1808, 1988, 2003
BstDSI	CCRYGG	1 cut(s)	627
BstF5I	GGATG	9 cut(s)	215, 502, 670, 754, 763, 1264, 1428, 1549, 1774
BstFNI	CGCG	1 cut(s)	1972
BstH2I	RGCGCY	2 cut(s)	559, 1825
BstHHI	GCGC	3 cut(s)	558, 1824, 2001
BstMAI	GTCTC	3 cut(s)	1004, 1915, 1980
BstMWI	GCNNNNNNNGC	9 cut(s)	146, 485, 494, 583, 779, 1076, 1228, 1435, 1996
BstNI	CCWGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
BstSCI	CCNGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
BstSFI	CTRYAG	5 cut(s)	21, 138, 486, 570, 780
BstUI	CGCG	1 cut(s)	1972
BstV1I	GCAGC	3 cut(s)	556, 782, 794
BstV2I	GAAGAC	2 cut(s)	1653, 1966
BstX2I	RGATCY	3 cut(s)	142, 680, 2051
BstYI	RGATCY	3 cut(s)	142, 680, 2051
Bsu36I	CCTNAGG	1 cut(s)	70
BsuI	GTATCC	1 cut(s)	818
BsuRI	GGCC	2 cut(s)	515, 1552
BtgI	CCRYGG	1 cut(s)	627
BtsCI	GGATG	9 cut(s)	215, 502, 670, 754, 763, 1264, 1428, 1549, 1774
BtsI	GCAGTG	3 cut(s)	483, 579, 1194
BtsIMutI	CAGTG	4 cut(s)	462, 483, 579, 1194
Cac8I	GCNNGC	4 cut(s)	7, 1808, 1988, 2003
CaiI	CAGNNNCTG	1 cut(s)	494
CciI	TCATGA	2 cut(s)	232, 1177
CfoI	GCGC	3 cut(s)	558, 1824, 2001
Cfr13I	GGNCC	5 cut(s)	262, 356, 394, 467, 631
CseI	GACGC	1 cut(s)	23
CsiI	ACCWGGT	2 cut(s)	313, 1048
Csp6I	GTAC	2 cut(s)	1044, 1910
CviQI	GTAC	2 cut(s)	1044, 1910
DraIII	CACNNNGTG	2 cut(s)	317, 1052
Eam1104I	CTCTTC	4 cut(s)	738, 1221, 1834, 2023
EarI	CTCTTC	4 cut(s)	738, 1221, 1834, 2023
Ecl136II	GAGCTC	1 cut(s)	844
Eco130I	CCWWGG	2 cut(s)	627, 963
Eco147I	AGGCCT	1 cut(s)	1552
Eco24I	GRGCYC	1 cut(s)	846
Eco31I	GGTCTC	1 cut(s)	1980
Eco47I	GGWCC	5 cut(s)	262, 356, 394, 467, 631
Eco53kI	GAGCTC	1 cut(s)	844
Eco57I	CTGAAG	4 cut(s)	759, 837, 915, 1035
Eco81I	CCTNAGG	1 cut(s)	70
EcoICRI	GAGCTC	1 cut(s)	844
EcoRI	GAATTC	1 cut(s)	289
EcoRII	CCWGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
EcoT14I	CCWWGG	2 cut(s)	627, 963
EcoT22I	ATGCAT	1 cut(s)	532
EcoT38I	GRGCYC	1 cut(s)	846
ErhI	CCWWGG	2 cut(s)	627, 963
Esp3I	CGTCTC	1 cut(s)	1915
FalI	AAGNNNNNCTT	2 cut(s)	1450, 1482
FaqI	GGGAC	2 cut(s)	380, 1351
FbaI	TGATCA	2 cut(s)	199, 697
FblI	GTMKAC	1 cut(s)	1488
Fnu4HI	GCNGC	5 cut(s)	570, 771, 783, 2069, 2072
FokI	GGATG	9 cut(s)	202, 489, 677, 761, 770, 1271, 1435, 1556, 1781
FriOI	GRGCYC	1 cut(s)	846
Fsp4HI	GCNGC	5 cut(s)	570, 771, 783, 2069, 2072
FspBI	CTAG	4 cut(s)	729, 999, 1035, 1953
GlaI	GCGC	3 cut(s)	557, 1823, 2000
GluI	GCNGC	5 cut(s)	570, 771, 783, 2069, 2072
GsaI	CCCAGC	1 cut(s)	950
GsuI	CTGGAG	4 cut(s)	428, 1024, 1197, 1644
HaeII	RGCGCY	2 cut(s)	559, 1825
HaeIII	GGCC	2 cut(s)	515, 1552
HapII	CCGG	2 cut(s)	392, 1256
HgaI	GACGC	1 cut(s)	23
HhaI	GCGC	3 cut(s)	558, 1824, 2001
Hin1I	GRCGYC	1 cut(s)	1924
Hin6I	GCGC	3 cut(s)	556, 1822, 1999
HinP1I	GCGC	3 cut(s)	556, 1822, 1999
HincII	GTYRAC	2 cut(s)	676, 1678
HindII	GTYRAC	2 cut(s)	676, 1678
HindIII	AAGCTT	1 cut(s)	977
HpaII	CCGG	2 cut(s)	392, 1256
HphI	GGTGA	8 cut(s)	536, 707, 1037, 1064, 1127, 1532, 1932, 2052
Hpy166II	GTNNAC	7 cut(s)	262, 676, 1046, 1489, 1678, 1787, 1940
Hpy8I	GTNNAC	7 cut(s)	262, 676, 1046, 1489, 1678, 1787, 1940
Hpy99I	CGWCG	1 cut(s)	1097
HpyCH4III	ACNGT	8 cut(s)	277, 301, 511, 654, 832, 1165, 1345, 1493
HpyCH4IV	ACGT	3 cut(s)	1783, 1924, 1936
HpyF10VI	GCNNNNNNNGC	9 cut(s)	146, 485, 494, 583, 779, 1076, 1228, 1435, 1996
HpySE526I	ACGT	3 cut(s)	1783, 1924, 1936
Hsp92I	GRCGYC	1 cut(s)	1924
HspAI	GCGC	3 cut(s)	556, 1822, 1999
Ksp22I	TGATCA	2 cut(s)	199, 697
LguI	GCTCTTC	1 cut(s)	1221
LmnI	GCTCC	3 cut(s)	412, 1043, 1829
Lsp1109I	GCAGC	3 cut(s)	556, 782, 794
LweI	GCATC	6 cut(s)	191, 224, 517, 621, 949, 1180
MabI	ACCWGGT	2 cut(s)	313, 1048
MaeI	CTAG	4 cut(s)	729, 999, 1035, 1953
MaeII	ACGT	3 cut(s)	1783, 1924, 1936
MaeIII	GTNAC	2 cut(s)	832, 1925
MflI	RGATCY	3 cut(s)	142, 680, 2051
MhlI	GDGCHC	4 cut(s)	39, 211, 846, 1233
MlyI	GAGTC	5 cut(s)	906, 1190, 1424, 1698, 1793
MmeI	TCCRAC	1 cut(s)	482
Mph1103I	ATGCAT	1 cut(s)	532
MseI	TTAA	6 cut(s)	192, 600, 789, 1374, 1617, 1857
MslI	CAYNNNNRTG	2 cut(s)	1671, 1875
MspI	CCGG	2 cut(s)	392, 1256
MspR9I	CCNGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
Mva1269I	GAATGC	2 cut(s)	1990, 2005
MvaI	CCWGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
MvnI	CGCG	1 cut(s)	1972
MwoI	GCNNNNNNNGC	9 cut(s)	146, 485, 494, 583, 779, 1076, 1228, 1435, 1996
NcoI	CCATGG	1 cut(s)	627
NlaIV	GGNNCC	3 cut(s)	264, 396, 1350
NmuCI	GTSAC	1 cut(s)	1925
NsiI	ATGCAT	1 cut(s)	532
PagI	TCATGA	2 cut(s)	232, 1177
PceI	AGGCCT	1 cut(s)	1552
PciSI	GCTCTTC	1 cut(s)	1221
PctI	GAATGC	2 cut(s)	1990, 2005
PfeI	GAWTC	9 cut(s)	236, 722, 1004, 1528, 1586, 1640, 1646, 1883, 1895
PflMI	CCANNNNNTGG	2 cut(s)	464, 1145
PfoI	TCCNGGA	2 cut(s)	430, 1418
PkrI	GCNGC	5 cut(s)	571, 772, 784, 2070, 2073
PleI	GAGTC	5 cut(s)	906, 1189, 1423, 1698, 1793
PpsI	GAGTC	5 cut(s)	906, 1189, 1423, 1698, 1793
PsiI	TTATAA	1 cut(s)	1287
Psp124BI	GAGCTC	1 cut(s)	846
Psp6I	CCWGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
PspFI	CCCAGC	1 cut(s)	946
PspGI	CCWGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
PspN4I	GGNNCC	3 cut(s)	264, 396, 1350
PspPI	GGNCC	5 cut(s)	262, 356, 394, 467, 631
PsrI	GAACNNNNNNTAC	4 cut(s)	1447, 1479, 1702, 1734
PstI	CTGCAG	5 cut(s)	25, 142, 490, 574, 784
PstNI	CAGNNNCTG	1 cut(s)	494
PsuI	RGATCY	3 cut(s)	142, 680, 2051
RsaI	GTAC	2 cut(s)	1045, 1911
RsaNI	GTAC	2 cut(s)	1044, 1910
RseI	CAYNNNNRTG	2 cut(s)	1671, 1875
SacI	GAGCTC	1 cut(s)	846
SapI	GCTCTTC	1 cut(s)	1221
SaqAI	TTAA	6 cut(s)	192, 600, 789, 1374, 1617, 1857
SatI	GCNGC	5 cut(s)	570, 771, 783, 2069, 2072
Sau96I	GGNCC	5 cut(s)	262, 356, 394, 467, 631
SchI	GAGTC	5 cut(s)	906, 1190, 1424, 1698, 1793
ScrFI	CCNGG	7 cut(s)	315, 399, 432, 522, 1050, 1420, 1623
SduI	GDGCHC	4 cut(s)	39, 211, 846, 1233
SexAI	ACCWGGT	2 cut(s)	313, 1048
SfaNI	GCATC	6 cut(s)	191, 224, 517, 621, 949, 1180
SfcI	CTRYAG	5 cut(s)	21, 138, 486, 570, 780
SinI	GGWCC	5 cut(s)	262, 356, 394, 467, 631
SmiMI	CAYNNNNRTG	2 cut(s)	1671, 1875
SmlI	CTYRAG	2 cut(s)	638, 1801
SmoI	CTYRAG	2 cut(s)	638, 1801
SseBI	AGGCCT	1 cut(s)	1552
SsiI	CCGC	3 cut(s)	1972, 2068, 2071
SspMI	CTAG	4 cut(s)	729, 999, 1035, 1953
SstI	GAGCTC	1 cut(s)	846
StuI	AGGCCT	1 cut(s)	1552
StyD4I	CCNGG	7 cut(s)	313, 397, 430, 520, 1048, 1418, 1621
StyI	CCWWGG	2 cut(s)	627, 963
TaaI	ACNGT	8 cut(s)	277, 301, 511, 654, 832, 1165, 1345, 1493
TaiI	ACGT	3 cut(s)	1786, 1927, 1939
TaqI	TCGA	1 cut(s)	1444
TatI	WGTACW	1 cut(s)	1043
TauI	GCSGC	2 cut(s)	2071, 2074
TfiI	GAWTC	9 cut(s)	236, 722, 1004, 1528, 1586, 1640, 1646, 1883, 1895
Tru1I	TTAA	6 cut(s)	192, 600, 789, 1374, 1617, 1857
Tru9I	TTAA	6 cut(s)	192, 600, 789, 1374, 1617, 1857
TscAI	CASTG	4 cut(s)	469, 490, 579, 1201
TseFI	GTSAC	1 cut(s)	1925
TseI	GCWGC	3 cut(s)	569, 770, 782
Tsp45I	GTSAC	1 cut(s)	1925
TspDTI	ATGAA	6 cut(s)	302, 405, 681, 867, 1439, 1896
TspGWI	ACGGA	3 cut(s)	549, 1379, 1697
TspRI	CASTG	4 cut(s)	469, 490, 579, 1201
Van91I	CCANNNNNTGG	2 cut(s)	464, 1145
VpaK11BI	GGWCC	5 cut(s)	262, 356, 394, 467, 631
XapI	RAATTY	5 cut(s)	64, 176, 289, 619, 1119
XbaI	TCTAGA	1 cut(s)	728
XmiI	GTMKAC	1 cut(s)	1488
XspI	CTAG	4 cut(s)	729, 999, 1035, 1953
ZraI	GACGTC	1 cut(s)	1925
Zsp2I	ATGCAT	1 cut(s)	532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.