No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25590 |
| fragaria_vesca | FvH4_4g28580 |
| malus_domestica | MD13G1052200.v1.1 MD16G1057700.v1.1 |
| prunus_persica | Prupe.1G299900_v2.0.a1 |
| pyrus_communis | pycom13g04650 pycom16g05050 |
| rosa_chinensis | RchiOBHm_Chr4g0436671 |
| rosa_laevigata | RLG00000006505 |
| rosa_multiflora | Rmu_sc0003130.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00377750 |
| rosa_rugosa | Rorug04G0295100 |
| rosa_samantha | Rh4AG349600 Rh4BG358300 Rh4CG372700 Rh4DG352500 |
| rosa_wichuraiana | Rw4G030580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 165 |
| AclWI | GGATC | 1 cut(s) | 1195 |
| AfaI | GTAC | 2 cut(s) | 53, 1195 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1184 |
| AgsI | TTSAA | 4 cut(s) | 600, 973, 1144, 1231 |
| AhlI | ACTAGT | 1 cut(s) | 148 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 373, 405, 816, 848, 863, 895 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 989, 1021 |
| AluBI | AGCT | 9 cut(s) | 20, 143, 363, 608, 940, 984, 1055, 1140, 1182 |
| AluI | AGCT | 9 cut(s) | 20, 143, 363, 608, 940, 984, 1055, 1140, 1182 |
| Alw26I | GTCTC | 3 cut(s) | 182, 265, 522 |
| AlwI | GGATC | 1 cut(s) | 1195 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 363 |
| ApeKI | GCWGC | 6 cut(s) | 172, 354, 357, 360, 608, 937 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 1 cut(s) | 1049 |
| AsuHPI | GGTGA | 3 cut(s) | 179, 578, 806 |
| AvaII | GGWCC | 1 cut(s) | 1049 |
| BbsI | GAAGAC | 1 cut(s) | 314 |
| BbvCI | CCTCAGC | 1 cut(s) | 344 |
| BbvI | GCAGC | 6 cut(s) | 184, 366, 369, 372, 595, 949 |
| BccI | CCATC | 5 cut(s) | 554, 571, 785, 970, 1061 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 210, 244 |
| BclI | TGATCA | 2 cut(s) | 490, 568 |
| BcoDI | GTCTC | 3 cut(s) | 182, 265, 522 |
| BcuI | ACTAGT | 1 cut(s) | 148 |
| BfaI | CTAG | 6 cut(s) | 140, 149, 513, 591, 621, 1197 |
| BfoI | RGCGCY | 1 cut(s) | 139 |
| BglII | AGATCT | 1 cut(s) | 201 |
| BisI | GCNGC | 6 cut(s) | 173, 355, 358, 361, 609, 938 |
| BlsI | GCNGC | 6 cut(s) | 174, 356, 359, 362, 610, 939 |
| BmcAI | AGTACT | 2 cut(s) | 53, 1195 |
| Bme18I | GGWCC | 1 cut(s) | 1049 |
| BmgT120I | GGNCC | 1 cut(s) | 1049 |
| BmrI | ACTGGG | 1 cut(s) | 243 |
| BmsI | GCATC | 1 cut(s) | 1180 |
| BmuI | ACTGGG | 1 cut(s) | 243 |
| BpiI | GAAGAC | 1 cut(s) | 314 |
| Bpu10I | CCTNAGC | 1 cut(s) | 344 |
| BsaI | GGTCTC | 1 cut(s) | 522 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 607, 637, 694, 718, 724, 742, 748, 772 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1184 |
| Bse1I | ACTGG | 1 cut(s) | 238 |
| BseGI | GGATG | 5 cut(s) | 206, 565, 919, 1072, 1174 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1184 |
| BseMII | CTCAG | 4 cut(s) | 189, 335, 360, 618 |
| BseNI | ACTGG | 1 cut(s) | 238 |
| BseRI | GAGGAG | 3 cut(s) | 344, 361, 364 |
| BseXI | GCAGC | 6 cut(s) | 184, 366, 369, 372, 595, 949 |
| BseYI | CCCAGC | 1 cut(s) | 1182 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1184 |
| BsmAI | GTCTC | 3 cut(s) | 182, 265, 522 |
| BsmBI | CGTCTC | 1 cut(s) | 182 |
| Bso31I | GGTCTC | 1 cut(s) | 522 |
| Bsp143I | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| BspACI | CCGC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 4 cut(s) | 190, 336, 361, 617 |
| BspPI | GGATC | 1 cut(s) | 1195 |
| BspTNI | GGTCTC | 1 cut(s) | 522 |
| BsrI | ACTGG | 1 cut(s) | 238 |
| BssMI | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| Bst4CI | ACNGT | 1 cut(s) | 1105 |
| Bst6I | CTCTTC | 4 cut(s) | 187, 413, 701, 773 |
| BstDEI | CTNAG | 4 cut(s) | 198, 344, 369, 604 |
| BstF5I | GGATG | 5 cut(s) | 206, 565, 919, 1072, 1174 |
| BstH2I | RGCGCY | 1 cut(s) | 139 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstKTI | GATC | 5 cut(s) | 204, 375, 493, 571, 1190 |
| BstMAI | GTCTC | 3 cut(s) | 182, 265, 522 |
| BstMBI | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 360 |
| BstV1I | GCAGC | 6 cut(s) | 184, 366, 369, 372, 595, 949 |
| BstV2I | GAAGAC | 1 cut(s) | 314 |
| BstX2I | RGATCY | 1 cut(s) | 201 |
| BstYI | RGATCY | 1 cut(s) | 201 |
| BtsCI | GGATG | 5 cut(s) | 206, 565, 919, 1072, 1174 |
| BtsI | GCAGTG | 1 cut(s) | 627 |
| BtsIMutI | CAGTG | 3 cut(s) | 231, 627, 1110 |
| CaiI | CAGNNNCTG | 1 cut(s) | 363 |
| CfoI | GCGC | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 1 cut(s) | 1049 |
| CseI | GACGC | 1 cut(s) | 164 |
| Csp6I | GTAC | 2 cut(s) | 52, 1194 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 364, 399 |
| CviAII | CATG | 6 cut(s) | 46, 78, 228, 494, 1015, 1040 |
| CviQI | GTAC | 2 cut(s) | 52, 1194 |
| DdeI | CTNAG | 4 cut(s) | 198, 344, 369, 604 |
| DpnI | GATC | 5 cut(s) | 203, 374, 492, 570, 1189 |
| DpnII | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| Eam1104I | CTCTTC | 4 cut(s) | 187, 413, 701, 773 |
| EarI | CTCTTC | 4 cut(s) | 187, 413, 701, 773 |
| Eco31I | GGTCTC | 1 cut(s) | 522 |
| Eco47I | GGWCC | 1 cut(s) | 1049 |
| Esp3I | CGTCTC | 1 cut(s) | 182 |
| FaeI | CATG | 6 cut(s) | 49, 81, 231, 497, 1018, 1043 |
| FatI | CATG | 6 cut(s) | 45, 77, 227, 493, 1014, 1039 |
| FbaI | TGATCA | 2 cut(s) | 490, 568 |
| Fnu4HI | GCNGC | 6 cut(s) | 173, 355, 358, 361, 609, 938 |
| FokI | GGATG | 5 cut(s) | 193, 572, 926, 1079, 1161 |
| Fsp4HI | GCNGC | 6 cut(s) | 173, 355, 358, 361, 609, 938 |
| FspBI | CTAG | 6 cut(s) | 140, 149, 513, 591, 621, 1197 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GluI | GCNGC | 6 cut(s) | 173, 355, 358, 361, 609, 938 |
| GsaI | CCCAGC | 1 cut(s) | 1186 |
| HaeII | RGCGCY | 1 cut(s) | 139 |
| HgaI | GACGC | 1 cut(s) | 164 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1II | CATG | 6 cut(s) | 49, 81, 231, 497, 1018, 1043 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HindIII | AAGCTT | 2 cut(s) | 982, 1138 |
| HinfI | GANTC | 8 cut(s) | 26, 217, 258, 551, 647, 917, 956, 998 |
| HphI | GGTGA | 3 cut(s) | 179, 578, 806 |
| Hpy188I | TCNGA | 9 cut(s) | 70, 129, 160, 199, 270, 556, 823, 997, 1010 |
| Hpy188III | TCNNGA | 2 cut(s) | 376, 651 |
| HpyAV | CCTTC | 9 cut(s) | 424, 668, 692, 716, 740, 764, 768, 1125, 1138 |
| HpyCH4III | ACNGT | 1 cut(s) | 1105 |
| HpyCH4V | TGCA | 4 cut(s) | 81, 231, 611, 937 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 360 |
| HpyF3I | CTNAG | 4 cut(s) | 198, 344, 369, 604 |
| Hsp92II | CATG | 6 cut(s) | 49, 81, 231, 497, 1018, 1043 |
| HspAI | GCGC | 1 cut(s) | 136 |
| Ksp22I | TGATCA | 2 cut(s) | 490, 568 |
| Kzo9I | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| LmnI | GCTCC | 2 cut(s) | 351, 863 |
| LpnPI | CCDG | 9 cut(s) | 219, 570, 618, 636, 975, 978, 1065, 1153, 1168 |
| Lsp1109I | GCAGC | 6 cut(s) | 184, 366, 369, 372, 595, 949 |
| LweI | GCATC | 1 cut(s) | 1180 |
| MaeI | CTAG | 6 cut(s) | 140, 149, 513, 591, 621, 1197 |
| MaeIII | GTNAC | 2 cut(s) | 625, 1025 |
| MalI | GATC | 5 cut(s) | 203, 374, 492, 570, 1189 |
| MboI | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| MflI | RGATCY | 1 cut(s) | 201 |
| MluCI | AATT | 4 cut(s) | 94, 824, 1058, 1098 |
| MlyI | GAGTC | 4 cut(s) | 35, 267, 560, 926 |
| MmeI | TCCRAC | 2 cut(s) | 891, 1133 |
| MslI | CAYNNNNRTG | 2 cut(s) | 498, 1044 |
| MspA1I | CMGCKG | 2 cut(s) | 363, 608 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 360 |
| NdeII | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| NlaIII | CATG | 6 cut(s) | 49, 81, 231, 497, 1018, 1043 |
| NmuCI | GTSAC | 2 cut(s) | 625, 1025 |
| PfeI | GAWTC | 4 cut(s) | 217, 647, 956, 998 |
| PkrI | GCNGC | 6 cut(s) | 174, 356, 359, 362, 610, 939 |
| PleI | GAGTC | 4 cut(s) | 34, 266, 559, 925 |
| PpsI | GAGTC | 4 cut(s) | 34, 266, 559, 925 |
| PspFI | CCCAGC | 1 cut(s) | 1182 |
| PspPI | GGNCC | 1 cut(s) | 1049 |
| PstNI | CAGNNNCTG | 1 cut(s) | 363 |
| PsuI | RGATCY | 1 cut(s) | 201 |
| PvuII | CAGCTG | 2 cut(s) | 363, 608 |
| RsaI | GTAC | 2 cut(s) | 53, 1195 |
| RsaNI | GTAC | 2 cut(s) | 52, 1194 |
| RseI | CAYNNNNRTG | 2 cut(s) | 498, 1044 |
| SatI | GCNGC | 6 cut(s) | 173, 355, 358, 361, 609, 938 |
| Sau3AI | GATC | 5 cut(s) | 201, 372, 490, 568, 1187 |
| Sau96I | GGNCC | 1 cut(s) | 1049 |
| ScaI | AGTACT | 2 cut(s) | 53, 1195 |
| SchI | GAGTC | 4 cut(s) | 35, 267, 560, 926 |
| SfaNI | GCATC | 1 cut(s) | 1180 |
| SinI | GGWCC | 1 cut(s) | 1049 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 498, 1044 |
| SpeI | ACTAGT | 1 cut(s) | 148 |
| Sse9I | AATT | 4 cut(s) | 94, 824, 1058, 1098 |
| SsiI | CCGC | 1 cut(s) | 165 |
| SspMI | CTAG | 6 cut(s) | 140, 149, 513, 591, 621, 1197 |
| TaaI | ACNGT | 1 cut(s) | 1105 |
| TaqI | TCGA | 2 cut(s) | 215, 220 |
| TasI | AATT | 4 cut(s) | 94, 824, 1058, 1098 |
| TatI | WGTACW | 2 cut(s) | 51, 1193 |
| TfiI | GAWTC | 4 cut(s) | 217, 647, 956, 998 |
| TscAI | CASTG | 3 cut(s) | 238, 634, 1110 |
| TseFI | GTSAC | 2 cut(s) | 625, 1025 |
| TseI | GCWGC | 6 cut(s) | 172, 354, 357, 360, 608, 937 |
| Tsp45I | GTSAC | 2 cut(s) | 625, 1025 |
| TspDTI | ATGAA | 4 cut(s) | 54, 822, 1056, 1227 |
| TspRI | CASTG | 3 cut(s) | 238, 634, 1110 |
| VpaK11BI | GGWCC | 1 cut(s) | 1049 |
| XspI | CTAG | 6 cut(s) | 140, 149, 513, 591, 621, 1197 |
| ZrmI | AGTACT | 2 cut(s) | 53, 1195 |