FvH4_4g29130

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
29412539 .. 29412784
246 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29130.t1

Sequence Viewer

Length: 246 bp
ATGAGTAGTAATAGAAAGCAAGCAGAGGTCTCTGGTCTGTCTCGCATGAAGGAGTGCTTATCTTTCACTGTTTCGTTGCGAGAGGGTTTTGGCTATGTCAAGGCCTTCTTTGTTGGTCAGGCTAAGAGGTTGACAGCAAGAAATGAGAAAGAAGCAGCAGAAGCAGACCTAGTAACTGCCAAAATGCAAGTTGAAGCTACTGACGCAGCCGAGGATACCAAGAACAGACTCAACAAATCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

82

Amino Acids

8.95

Weight (kDa)

9.25

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014493)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 194
AluBI AGCT 1 cut(s) 197
AluI AGCT 1 cut(s) 197
Alw26I GTCTC 2 cut(s) 34, 45
AoxI GGCC 1 cut(s) 102
ApeKI GCWGC 2 cut(s) 155, 206
BbvI GCAGC 2 cut(s) 167, 218
BciVI GTATCC 1 cut(s) 208
BcoDI GTCTC 2 cut(s) 34, 45
BfaI CTAG 1 cut(s) 170
BfuI GTATCC 1 cut(s) 208
BisI GCNGC 2 cut(s) 156, 207
BlsI GCNGC 2 cut(s) 157, 208
BsaI GGTCTC 1 cut(s) 34
BsaJI CCNNGG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 210
BseXI GCAGC 2 cut(s) 167, 218
BshFI GGCC 1 cut(s) 104
BsmAI GTCTC 2 cut(s) 34, 45
BsnI GGCC 1 cut(s) 104
Bso31I GGTCTC 1 cut(s) 34
BspANI GGCC 1 cut(s) 104
BspTNI GGTCTC 1 cut(s) 34
BssECI CCNNGG 1 cut(s) 210
Bst4CI ACNGT 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 21
BstDEI CTNAG 1 cut(s) 123
BstMAI GTCTC 2 cut(s) 34, 45
BstMWI GCNNNNNNNGC 2 cut(s) 161, 203
BstV1I GCAGC 2 cut(s) 167, 218
BsuI GTATCC 1 cut(s) 208
BsuRI GGCC 1 cut(s) 104
BtsIMutI CAGTG 1 cut(s) 66
Cac8I GCNNGC 1 cut(s) 21
CseI GACGC 1 cut(s) 212
CviAII CATG 1 cut(s) 46
CviJI RGCY 5 cut(s) 93, 104, 122, 197, 209
CviKI_1 RGCY 5 cut(s) 93, 104, 122, 197, 209
DdeI CTNAG 1 cut(s) 123
Eco147I AGGCCT 1 cut(s) 104
Eco31I GGTCTC 1 cut(s) 34
FaeI CATG 1 cut(s) 49
FaiI YATR 2 cut(s) 47, 96
FalI AAGNNNNNCTT 4 cut(s) 41, 73, 92, 124
FatI CATG 1 cut(s) 45
Fnu4HI GCNGC 2 cut(s) 156, 207
Fsp4HI GCNGC 2 cut(s) 156, 207
FspBI CTAG 1 cut(s) 170
GluI GCNGC 2 cut(s) 156, 207
HaeIII GGCC 1 cut(s) 104
HgaI GACGC 1 cut(s) 212
Hin1II CATG 1 cut(s) 49
HincII GTYRAC 1 cut(s) 132
HindII GTYRAC 1 cut(s) 132
HinfI GANTC 1 cut(s) 228
Hpy166II GTNNAC 1 cut(s) 132
Hpy8I GTNNAC 1 cut(s) 132
HpyAV CCTTC 2 cut(s) 43, 115
HpyCH4III ACNGT 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 187
HpyF10VI GCNNNNNNNGC 2 cut(s) 161, 203
HpyF3I CTNAG 1 cut(s) 123
Hsp92II CATG 1 cut(s) 49
LpnPI CCDG 2 cut(s) 18, 104
Lsp1109I GCAGC 2 cut(s) 167, 218
MaeI CTAG 1 cut(s) 170
MaeIII GTNAC 1 cut(s) 172
MlyI GAGTC 1 cut(s) 222
MnlI CCTC 4 cut(s) 19, 76, 120, 205
MwoI GCNNNNNNNGC 2 cut(s) 161, 203
NlaIII CATG 1 cut(s) 49
NmeAIII GCCGAG 1 cut(s) 235
PceI AGGCCT 1 cut(s) 104
PkrI GCNGC 2 cut(s) 157, 208
PleI GAGTC 1 cut(s) 222
PpsI GAGTC 1 cut(s) 222
SatI GCNGC 2 cut(s) 156, 207
SchI GAGTC 1 cut(s) 222
SetI ASST 4 cut(s) 30, 131, 171, 199
SseBI AGGCCT 1 cut(s) 104
SspMI CTAG 1 cut(s) 170
StuI AGGCCT 1 cut(s) 104
TaaI ACNGT 1 cut(s) 70
TscAI CASTG 1 cut(s) 73
TseI GCWGC 2 cut(s) 155, 206
TspDTI ATGAA 1 cut(s) 62
TspRI CASTG 1 cut(s) 73
XspI CTAG 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.