Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011116

Physical Location & Seq

Genomic Coordinates Forward (+)

29931418 .. 29934782

Gene Structure 3365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g30160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGGCGTCACAAATGGCGATCCTCGCCCGGACCCGATCCCTATCCAAAACCCTAAACCCAAAACCTAGCTTCTTCAAGACCATCACCAACTTCTCCTTCCTCTCCCAGGAGCCCCAACTCGCCGCCGCCGAGCCTTCTCCGCCGCCCCAATCCTCCTCCTCCGTCCCGCTCCCTCCGAACCCGACCTCGTACCCCGAAAACTGGCGCTCGCCGCCGATCAACTTCTCGGCGGCGGCCTCTCTGCTCCCCTCAGGCTTCCTCGAGCAGTCGCCGAGCTACAAAATCCAGTCACTCGCGCAAGACCTGGACTCGCCGGGACTGCTCAACGTCTTCGCCGATTGGATGACGTCACAGCGGTGGACGGAGATGAAGCAGCTGTTTGAGGTCTGGATAAGGTCGATGGACAAGAGCGGCCGGCCGAATAGGCCCGATGTGAGCTCGTATAATCACTACCTGATGGCGAATCTCATGAGCGGCGCCACGGCGGCGGATATGCTGGATCTGGTGGCGCGTATGGAGGACTGCGGCGTGGCGCCGAACACGGCGTCGTTTAATCTCGTTTTGAAGGCAATGCACGCCGGCCAGGAGTCCGAGGCTGCTGAGAAATTGCTCCAACGGATGTTGCAGACAGGCAAGGCCTCACCGCCTGACGATGAGTCGTACAACATAGTTGTGAGCTTGCTGTTGCAATCGCACCGAAATGATGCTGCTTTCAAGTATATAGAATTGACTTTGAAGTCTGGCTATATGGTGACAATGACGGTATTCCAAGATTGTGTACAGGCATGCGTCAACACCGGGAAGTTAGATACTTTGGTTTCGATAATTGACAAGTGCAAGTCAATGGATCAGAACAAAGCTCTTTGTCCGCCATGGAACTTGTGCAACTTTATTGCGGACGTGGCTTTGCAGGTGGATAATAGCAAGTTAGCAGTTCATGCCTTGCAGTTTATGGCCAAATGGATTGCTAGGGGTGAAGCAGCAAGGCCAGCTGTTTTTCTGCCTGTAGATGAGGGATTGCTTGTGTCAGCACTTCAAACTGCTGGCAGGACATATAGTACTACTTTACTGGATGTGTCGTGGGCAATCTTGCAACGCTCTTTGCGAGGAAAGAAGGTCCCTAATCCTGAATCTTTCCTTGCGAAGATATCTGCCCTTGCATCGCTGGGGGAGCTGCAGAGAGCTTTTCGTACTCTTTCTGAGTTTGAGAGTGCTTATGCTAATTCCGGCAAAGAAATAGAAGAGGAATTGTTCTGTCCATTTACCTCTTTATATCCATTGGTTGTGGCATGCTCCAAGAATGGTTTTGAAACTTTGGACACGGTGTATTTTCAATTAGAGAGTTTGAGCTGTGCAGACCCTCCTTACAAGTCTGTTGCTGCTTTGAATTGCATCATATTAGGCTGTGCAAATATCTGGGACCTTGACCGTGCTTACCAAACTTTTGAGGCAATTAGTTCCACCTTTGGATTGACCCCTGATATTCATTCTTACAATGCTCTTATGCAGGCTTTTGGAAAGCTCAAGAAGACTTCAGAAGCTGTGAGAGTATTTGAACACTTGGTGAGTTTGGGTGTCAGACCCAATGCAATGTCATATTCATTACTTGTAGATGCTCATCTCATCAACAGAGATCCAAAAGTTGCCGTTTCTGTAGTCAAGGACATGGTAAAATCTGGGTTTAAACCTTCAAAAGAAACACTAAAAAAGATCAAGAGGCGATGTATGCGAGAGATGGACTATGAGAGTGATGATCTTGTGGAAGAATATGCCAAAACGTTTGACCTTCGAATGGATGGAGAGGCTCGCAGGAACAGATTGTTTGAACTTAAATTTAATAGCACTACGTATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

619

Amino Acids

68.67

Weight (kDa)

6.44

Isoelectric Point (pI)

50.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	493 - 539	1.5e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26460
fragaria_vesca	FvH4_4g30160 FvH4_4g30160
malus_domestica	MD13G1063400.v1.1 MD16G1061800.v1.1
prunus_persica	Prupe.1G286100_v2.0.a1
pyrus_communis	pycom13g05570 pycom16g05390
rosa_chinensis	RchiOBHm_Chr4g0438491
rosa_laevigata	RLG00000006359
rosa_multiflora	Rmu_sc0002327.1_g000019 Rmu_sc0004398.1_g000003
rosa_roxburghii	Rroxscaffold_5G00379500
rosa_rugosa	Rorug04G0310300
rosa_samantha	Rh4AG361100 Rh4BG372400 Rh4CG386400 Rh4DG367200
rosa_wichuraiana	Rw0G006590 Rw0G016540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	901
AasI	GACNNNNNNGTC	1 cut(s)	736
AatII	GACGTC	1 cut(s)	350
Acc36I	ACCTGC	1 cut(s)	901
AccB1I	GGYRCC	2 cut(s)	476, 532
AccBSI	CCGCTC	3 cut(s)	169, 411, 474
AccII	CGCG	2 cut(s)	296, 511
AclI	AACGTT	1 cut(s)	1778
AclWI	GGATC	5 cut(s)	13, 30, 507, 855, 1628
AcoI	YGGCCR	4 cut(s)	412, 416, 580, 954
AcsI	RAATTY	1 cut(s)	1832
AcuI	CTGAAG	1 cut(s)	1518
AcyI	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
AdeI	CACNNNGTG	1 cut(s)	1564
AfaI	GTAC	5 cut(s)	191, 662, 780, 1060, 1192
AfiI	CCNNNNNNNGG	3 cut(s)	106, 201, 1792
AhdI	GACNNNNNGTC	1 cut(s)	655
AjiI	CACGTC	1 cut(s)	901
AjnI	CCWGG	3 cut(s)	105, 303, 582
AjuI	GAANNNNNNNTTGG	2 cut(s)	80, 112
AleI	CACNNNNGTG	1 cut(s)	355
Alw21I	GWGCWC	1 cut(s)	440
AlwI	GGATC	5 cut(s)	13, 30, 507, 855, 1628
AlwNI	CAGNNNCTG	1 cut(s)	1541
Ama87I	CYCGRG	1 cut(s)	260
AoxI	GGCC	8 cut(s)	234, 412, 416, 425, 580, 636, 954, 986
ApeKI	GCWGC	6 cut(s)	373, 596, 707, 980, 1174, 1379
ApoI	RAATTY	1 cut(s)	1832
ArsI	GACNNNNNNTTYG	2 cut(s)	530, 562
AspLEI	GCGC	5 cut(s)	207, 298, 479, 511, 535
AspS9I	GGNCC	4 cut(s)	30, 426, 1117, 1420
AsuC2I	CCSGG	3 cut(s)	28, 315, 799
AsuHPI	GGTGA	5 cut(s)	76, 633, 763, 986, 1576
AsuII	TTCGAA	1 cut(s)	1789
AvaI	CYCGRG	1 cut(s)	260
AvaII	GGWCC	3 cut(s)	30, 1117, 1420
AxyI	CCTNAGG	1 cut(s)	250
BaeI	ACNNNNGTAYC	2 cut(s)	801, 834
BalI	TGGCCA	1 cut(s)	956
BanI	GGYRCC	2 cut(s)	476, 532
BanII	GRGCYC	2 cut(s)	114, 440
BbsI	GAAGAC	2 cut(s)	322, 1535
Bbv12I	GWGCWC	1 cut(s)	440
BbvI	GCAGC	6 cut(s)	385, 583, 694, 992, 1161, 1366
BccI	CCATC	5 cut(s)	89, 394, 451, 1729, 1790
BceAI	ACGGC	3 cut(s)	498, 558, 1631
BciT130I	CCWGG	3 cut(s)	107, 305, 584
BcnI	CCSGG	3 cut(s)	28, 315, 799
BfaI	CTAG	2 cut(s)	66, 969
BfmI	CTRYAG	3 cut(s)	1005, 1175, 1653
BfoI	RGCGCY	3 cut(s)	208, 480, 536
BfuAI	ACCTGC	1 cut(s)	901
BglI	GCCNNNNNGGC	2 cut(s)	424, 485
BmcAI	AGTACT	1 cut(s)	1060
Bme1390I	CCNGG	6 cut(s)	28, 107, 305, 315, 584, 799
Bme18I	GGWCC	3 cut(s)	30, 1117, 1420
BmeRI	GACNNNNNGTC	1 cut(s)	655
BmeT110I	CYCGRG	1 cut(s)	260
BmgBI	CACGTC	1 cut(s)	901
BmgT120I	GGNCC	4 cut(s)	30, 426, 1117, 1420
BmiI	GGNNCC	6 cut(s)	32, 111, 478, 534, 1119, 1421
BmrFI	CCNGG	6 cut(s)	28, 107, 305, 315, 584, 799
BmsI	GCATC	4 cut(s)	694, 1169, 1401, 1603
BpiI	GAAGAC	2 cut(s)	322, 1535
Bpu14I	TTCGAA	1 cut(s)	1789
BpuEI	CTTGAG	1 cut(s)	1508
BpuMI	CCSGG	3 cut(s)	28, 315, 799
BsaAI	YACGTR	1 cut(s)	1848
BsaBI	GATNNNNATC	2 cut(s)	40, 1617
BsaHI	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
BsaJI	CCNNGG	4 cut(s)	105, 480, 591, 872
Bsc4I	CCNNNNNNNGG	3 cut(s)	106, 201, 1792
Bse118I	RCCGGY	2 cut(s)	414, 578
Bse1I	ACTGG	3 cut(s)	206, 286, 1074
Bse21I	CCTNAGG	1 cut(s)	250
Bse3DI	GCAATG	2 cut(s)	576, 1596
Bse8I	GATNNNNATC	2 cut(s)	40, 1617
BseBI	CCWGG	3 cut(s)	107, 305, 584
BseDI	CCNNGG	4 cut(s)	105, 480, 591, 872
BseGI	GGATG	4 cut(s)	348, 624, 1078, 1801
BseJI	GATNNNNATC	2 cut(s)	40, 1617
BseLI	CCNNNNNNNGG	3 cut(s)	106, 201, 1792
BseMI	GCAATG	2 cut(s)	576, 1596
BseMII	CTCAG	3 cut(s)	264, 591, 1191
BseNI	ACTGG	3 cut(s)	206, 286, 1074
BseRI	GAGGAG	2 cut(s)	145, 148
BseX3I	CGGCCG	2 cut(s)	412, 416
BseXI	GCAGC	6 cut(s)	385, 583, 694, 992, 1161, 1366
BseYI	CCCAGC	1 cut(s)	1165
BsgI	GTGCAG	1 cut(s)	1374
Bsh1236I	CGCG	2 cut(s)	296, 511
Bsh1285I	CGRYCG	2 cut(s)	415, 419
BshFI	GGCC	8 cut(s)	236, 414, 418, 427, 582, 638, 956, 988
BshNI	GGYRCC	2 cut(s)	476, 532
BsiEI	CGRYCG	2 cut(s)	415, 419
BsiHKAI	GWGCWC	1 cut(s)	440
BsiHKCI	CYCGRG	1 cut(s)	260
BsiSI	CCGG	6 cut(s)	28, 314, 415, 579, 798, 1227
BslFI	GGGAC	4 cut(s)	149, 330, 1103, 1433
BslI	CCNNNNNNNGG	3 cut(s)	106, 201, 1792
BsmFI	GGGAC	4 cut(s)	149, 330, 1103, 1433
BsnI	GGCC	8 cut(s)	236, 414, 418, 427, 582, 638, 956, 988
BsoBI	CYCGRG	1 cut(s)	260
Bsp119I	TTCGAA	1 cut(s)	1789
Bsp1286I	GDGCHC	2 cut(s)	114, 440
Bsp1407I	TGTACA	1 cut(s)	778
Bsp143I	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
Bsp19I	CCATGG	1 cut(s)	872
BspANI	GGCC	8 cut(s)	236, 414, 418, 427, 582, 638, 956, 988
BspCNI	CTCAG	3 cut(s)	263, 592, 1192
BspFNI	CGCG	2 cut(s)	296, 511
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	6 cut(s)	32, 111, 478, 534, 1119, 1421
BspMAI	CTGCAG	1 cut(s)	1179
BspMI	ACCTGC	1 cut(s)	901
BspPI	GGATC	5 cut(s)	13, 30, 507, 855, 1628
BspT104I	TTCGAA	1 cut(s)	1789
BspT107I	GGYRCC	2 cut(s)	476, 532
BsrBI	CCGCTC	3 cut(s)	169, 411, 474
BsrDI	GCAATG	2 cut(s)	576, 1596
BsrFI	RCCGGY	2 cut(s)	414, 578
BsrGI	TGTACA	1 cut(s)	778
BsrI	ACTGG	3 cut(s)	206, 286, 1074
BssAI	RCCGGY	2 cut(s)	414, 578
BssECI	CCNNGG	4 cut(s)	105, 480, 591, 872
BssMI	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
BssNI	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
BssT1I	CCWWGG	1 cut(s)	872
Bst2UI	CCWGG	3 cut(s)	107, 305, 584
Bst4CI	ACNGT	3 cut(s)	763, 1324, 1430
Bst6I	CTCTTC	1 cut(s)	1236
BstACI	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
BstAPI	GCANNNNNTGC	1 cut(s)	938
BstAUI	TGTACA	1 cut(s)	778
BstBAI	YACGTR	1 cut(s)	1848
BstBI	TTCGAA	1 cut(s)	1789
BstDEI	CTNAG	3 cut(s)	250, 600, 1200
BstDSI	CCRYGG	2 cut(s)	480, 872
BstENI	CCTNNNNNAGG	1 cut(s)	104
BstF5I	GGATG	4 cut(s)	348, 624, 1078, 1801
BstFNI	CGCG	2 cut(s)	296, 511
BstH2I	RGCGCY	3 cut(s)	208, 480, 536
BstHHI	GCGC	5 cut(s)	207, 298, 479, 511, 535
BstKTI	GATC	8 cut(s)	21, 38, 219, 502, 850, 1636, 1713, 1756
BstMBI	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
BstMCI	CGRYCG	2 cut(s)	415, 419
BstNI	CCWGG	3 cut(s)	107, 305, 584
BstNSI	RCATGY	2 cut(s)	789, 1293
BstSCI	CCNGG	6 cut(s)	26, 105, 303, 313, 582, 797
BstSFI	CTRYAG	3 cut(s)	1005, 1175, 1653
BstSNI	TACGTA	1 cut(s)	1848
BstUI	CGCG	2 cut(s)	296, 511
BstV1I	GCAGC	6 cut(s)	385, 583, 694, 992, 1161, 1366
BstV2I	GAAGAC	2 cut(s)	322, 1535
BstX2I	RGATCY	2 cut(s)	499, 1633
BstYI	RGATCY	2 cut(s)	499, 1633
BstZI	CGGCCG	2 cut(s)	412, 416
Bsu36I	CCTNAGG	1 cut(s)	250
BsuRI	GGCC	8 cut(s)	236, 414, 418, 427, 582, 638, 956, 988
BtgI	CCRYGG	2 cut(s)	480, 872
BtgZI	GCGATG	2 cut(s)	1146, 1735
BtrI	CACGTC	1 cut(s)	901
BtsCI	GGATG	4 cut(s)	348, 624, 1078, 1801
BveI	ACCTGC	1 cut(s)	901
CaiI	CAGNNNCTG	1 cut(s)	1541
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	5 cut(s)	207, 298, 479, 511, 535
Cfr10I	RCCGGY	2 cut(s)	414, 578
Cfr13I	GGNCC	4 cut(s)	30, 426, 1117, 1420
CseI	GACGC	2 cut(s)	534, 778
Csp6I	GTAC	5 cut(s)	190, 661, 779, 1059, 1191
CviAII	CATG	6 cut(s)	469, 786, 873, 938, 1290, 1666
CviQI	GTAC	5 cut(s)	190, 661, 779, 1059, 1191
DdeI	CTNAG	3 cut(s)	250, 600, 1200
DinI	GGCGCC	2 cut(s)	478, 534
DpnI	GATC	8 cut(s)	20, 37, 218, 501, 849, 1635, 1712, 1755
DpnII	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
DraI	TTTAAA	1 cut(s)	1684
DraIII	CACNNNGTG	1 cut(s)	1564
DrdI	GACNNNNNNGTC	1 cut(s)	736
DriI	GACNNNNNGTC	1 cut(s)	655
DseDI	GACNNNNNNGTC	1 cut(s)	736
EaeI	YGGCCR	4 cut(s)	412, 416, 580, 954
EagI	CGGCCG	2 cut(s)	412, 416
Eam1104I	CTCTTC	1 cut(s)	1236
Eam1105I	GACNNNNNGTC	1 cut(s)	655
EarI	CTCTTC	1 cut(s)	1236
EciI	GGCGGA	3 cut(s)	129, 503, 858
Ecl136II	GAGCTC	1 cut(s)	438
EclXI	CGGCCG	2 cut(s)	412, 416
Eco105I	TACGTA	1 cut(s)	1848
Eco130I	CCWWGG	1 cut(s)	872
Eco147I	AGGCCT	1 cut(s)	638
Eco24I	GRGCYC	2 cut(s)	114, 440
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	3 cut(s)	30, 1117, 1420
Eco52I	CGGCCG	2 cut(s)	412, 416
Eco53kI	GAGCTC	1 cut(s)	438
Eco57I	CTGAAG	1 cut(s)	1518
Eco81I	CCTNAGG	1 cut(s)	250
Eco88I	CYCGRG	1 cut(s)	260
EcoICRI	GAGCTC	1 cut(s)	438
EcoNI	CCTNNNNNAGG	1 cut(s)	104
EcoO109I	RGGNCCY	2 cut(s)	1117, 1420
EcoRII	CCWGG	3 cut(s)	105, 303, 582
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	1 cut(s)	872
EcoT22I	ATGCAT	1 cut(s)	1855
EcoT38I	GRGCYC	2 cut(s)	114, 440
EgeI	GGCGCC	2 cut(s)	478, 534
EheI	GGCGCC	2 cut(s)	478, 534
ErhI	CCWWGG	1 cut(s)	872
FaeI	CATG	6 cut(s)	472, 789, 876, 941, 1293, 1669
FaqI	GGGAC	4 cut(s)	149, 330, 1103, 1433
FatI	CATG	6 cut(s)	468, 785, 872, 937, 1289, 1665
FauI	CCCGC	1 cut(s)	174
FokI	GGATG	4 cut(s)	355, 631, 1085, 1808
FriOI	GRGCYC	2 cut(s)	114, 440
FseI	GGCCGGCC	1 cut(s)	418
FspBI	CTAG	2 cut(s)	66, 969
GlaI	GCGC	5 cut(s)	206, 297, 478, 510, 534
GsaI	CCCAGC	1 cut(s)	1169
HaeII	RGCGCY	3 cut(s)	208, 480, 536
HaeIII	GGCC	8 cut(s)	236, 414, 418, 427, 582, 638, 956, 988
HapII	CCGG	6 cut(s)	28, 314, 415, 579, 798, 1227
HgaI	GACGC	2 cut(s)	534, 778
HhaI	GCGC	5 cut(s)	207, 298, 479, 511, 535
Hin1I	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
Hin1II	CATG	6 cut(s)	472, 789, 876, 941, 1293, 1669
Hin6I	GCGC	5 cut(s)	205, 296, 477, 509, 533
HinP1I	GCGC	5 cut(s)	205, 296, 477, 509, 533
HincII	GTYRAC	1 cut(s)	793
HindII	GTYRAC	1 cut(s)	793
HinfI	GANTC	5 cut(s)	308, 463, 587, 656, 1130
HpaII	CCGG	6 cut(s)	28, 314, 415, 579, 798, 1227
HphI	GGTGA	5 cut(s)	76, 633, 763, 986, 1576
Hpy166II	GTNNAC	3 cut(s)	360, 779, 793
Hpy188I	TCNGA	6 cut(s)	177, 592, 852, 1201, 1537, 1580
Hpy188III	TCNNGA	6 cut(s)	76, 388, 469, 1127, 1525, 1714
Hpy8I	GTNNAC	3 cut(s)	360, 779, 793
Hpy99I	CGWCG	1 cut(s)	550
HpyAV	CCTTC	6 cut(s)	106, 144, 559, 1108, 1698, 1796
HpyCH4III	ACNGT	3 cut(s)	763, 1324, 1430
HpyCH4IV	ACGT	5 cut(s)	327, 347, 900, 1778, 1847
HpyF3I	CTNAG	3 cut(s)	250, 600, 1200
HpySE526I	ACGT	5 cut(s)	327, 347, 900, 1778, 1847
Hsp92I	GRCGYC	5 cut(s)	5, 347, 477, 533, 545
Hsp92II	CATG	6 cut(s)	472, 789, 876, 941, 1293, 1669
HspAI	GCGC	5 cut(s)	205, 296, 477, 509, 533
KasI	GGCGCC	2 cut(s)	476, 532
KroI	GCCGGC	2 cut(s)	414, 578
KroNI	GCCGGC	2 cut(s)	416, 580
Kzo9I	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
LmnI	GCTCC	6 cut(s)	109, 174, 249, 615, 1171, 1298
Lsp1109I	GCAGC	6 cut(s)	385, 583, 694, 992, 1161, 1366
LweI	GCATC	4 cut(s)	694, 1169, 1401, 1603
MaeI	CTAG	2 cut(s)	66, 969
MaeII	ACGT	5 cut(s)	327, 347, 900, 1778, 1847
MaeIII	GTNAC	4 cut(s)	6, 288, 348, 751
MalI	GATC	8 cut(s)	20, 37, 218, 501, 849, 1635, 1712, 1755
MbiI	CCGCTC	3 cut(s)	169, 411, 474
MboI	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
MboII	GAAGA	6 cut(s)	64, 322, 1156, 1253, 1540, 1775
MflI	RGATCY	2 cut(s)	499, 1633
MhlI	GDGCHC	2 cut(s)	114, 440
MlsI	TGGCCA	1 cut(s)	956
MluCI	AATT	9 cut(s)	605, 725, 825, 1222, 1247, 1334, 1387, 1452, 1832
MluNI	TGGCCA	1 cut(s)	956
Mly113I	GGCGCC	2 cut(s)	477, 533
MlyI	GAGTC	3 cut(s)	302, 596, 665
MmeI	TCCRAC	1 cut(s)	637
Mox20I	TGGCCA	1 cut(s)	956
Mph1103I	ATGCAT	1 cut(s)	1855
MroNI	GCCGGC	2 cut(s)	414, 578
MscI	TGGCCA	1 cut(s)	956
MseI	TTAA	4 cut(s)	552, 1683, 1830, 1836
MslI	CAYNNNNRTG	3 cut(s)	355, 671, 699
Msp20I	TGGCCA	1 cut(s)	956
MspA1I	CMGCKG	3 cut(s)	355, 376, 992
MspI	CCGG	6 cut(s)	28, 314, 415, 579, 798, 1227
MspR9I	CCNGG	6 cut(s)	28, 107, 305, 315, 584, 799
MssI	GTTTAAAC	1 cut(s)	1684
MvaI	CCWGG	3 cut(s)	107, 305, 584
MvnI	CGCG	2 cut(s)	296, 511
NaeI	GCCGGC	2 cut(s)	416, 580
NarI	GGCGCC	2 cut(s)	477, 533
NciI	CCSGG	3 cut(s)	28, 315, 799
NcoI	CCATGG	1 cut(s)	872
NdeII	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
NgoMIV	GCCGGC	2 cut(s)	414, 578
NlaIII	CATG	6 cut(s)	472, 789, 876, 941, 1293, 1669
NlaIV	GGNNCC	6 cut(s)	32, 111, 478, 534, 1119, 1421
NmeAIII	GCCGAG	3 cut(s)	154, 206, 297
NmuCI	GTSAC	4 cut(s)	6, 288, 348, 751
NsiI	ATGCAT	1 cut(s)	1855
NspI	RCATGY	2 cut(s)	789, 1293
NspV	TTCGAA	1 cut(s)	1789
OliI	CACNNNNGTG	1 cut(s)	355
PaeI	GCATGC	2 cut(s)	789, 1293
PaeR7I	CTCGAG	1 cut(s)	260
PagI	TCATGA	1 cut(s)	468
PaqCI	CACCTGC	1 cut(s)	901
PceI	AGGCCT	1 cut(s)	638
PcsI	WCGNNNNNNNCGW	3 cut(s)	126, 333, 1102
PdiI	GCCGGC	2 cut(s)	416, 580
PfeI	GAWTC	2 cut(s)	463, 1130
PleI	GAGTC	3 cut(s)	302, 595, 664
PluTI	GGCGCC	2 cut(s)	480, 536
PmeI	GTTTAAAC	1 cut(s)	1684
PpsI	GAGTC	3 cut(s)	302, 595, 664
Ppu21I	YACGTR	1 cut(s)	1848
PpuMI	RGGWCCY	2 cut(s)	1117, 1420
Psp124BI	GAGCTC	1 cut(s)	440
Psp1406I	AACGTT	1 cut(s)	1778
Psp5II	RGGWCCY	2 cut(s)	1117, 1420
Psp6I	CCWGG	3 cut(s)	105, 303, 582
PspFI	CCCAGC	1 cut(s)	1165
PspGI	CCWGG	3 cut(s)	105, 303, 582
PspN4I	GGNNCC	6 cut(s)	32, 111, 478, 534, 1119, 1421
PspPI	GGNCC	4 cut(s)	30, 426, 1117, 1420
PspPPI	RGGWCCY	2 cut(s)	1117, 1420
PspXI	VCTCGAGB	1 cut(s)	260
PstI	CTGCAG	1 cut(s)	1179
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	2 cut(s)	499, 1633
PvuII	CAGCTG	2 cut(s)	376, 992
RigI	GGCCGGCC	1 cut(s)	418
RsaI	GTAC	5 cut(s)	191, 662, 780, 1060, 1192
RsaNI	GTAC	5 cut(s)	190, 661, 779, 1059, 1191
RseI	CAYNNNNRTG	3 cut(s)	355, 671, 699
SacI	GAGCTC	1 cut(s)	440
SaqAI	TTAA	4 cut(s)	552, 1683, 1830, 1836
Sau3AI	GATC	8 cut(s)	18, 35, 216, 499, 847, 1633, 1710, 1753
Sau96I	GGNCC	4 cut(s)	30, 426, 1117, 1420
ScaI	AGTACT	1 cut(s)	1060
SchI	GAGTC	3 cut(s)	302, 596, 665
ScrFI	CCNGG	6 cut(s)	28, 107, 305, 315, 584, 799
SduI	GDGCHC	2 cut(s)	114, 440
SfaNI	GCATC	4 cut(s)	694, 1169, 1401, 1603
SfcI	CTRYAG	3 cut(s)	1005, 1175, 1653
SfiI	GGCCNNNNNGGCC	1 cut(s)	424
SfoI	GGCGCC	2 cut(s)	478, 534
Sfr274I	CTCGAG	1 cut(s)	260
SfuI	TTCGAA	1 cut(s)	1789
SinI	GGWCC	3 cut(s)	30, 1117, 1420
SlaI	CTCGAG	1 cut(s)	260
SmiMI	CAYNNNNRTG	3 cut(s)	355, 671, 699
SmlI	CTYRAG	2 cut(s)	260, 1523
SmoI	CTYRAG	2 cut(s)	260, 1523
SnaBI	TACGTA	1 cut(s)	1848
SphI	GCATGC	2 cut(s)	789, 1293
Sse9I	AATT	9 cut(s)	605, 725, 825, 1222, 1247, 1334, 1387, 1452, 1832
SseBI	AGGCCT	1 cut(s)	638
SspDI	GGCGCC	2 cut(s)	476, 532
SspMI	CTAG	2 cut(s)	66, 969
SstI	GAGCTC	1 cut(s)	440
StuI	AGGCCT	1 cut(s)	638
StyD4I	CCNGG	6 cut(s)	26, 105, 303, 313, 582, 797
StyI	CCWWGG	1 cut(s)	872
TaaI	ACNGT	3 cut(s)	763, 1324, 1430
TaiI	ACGT	5 cut(s)	330, 350, 903, 1781, 1850
TaqI	TCGA	4 cut(s)	261, 398, 821, 1789
TasI	AATT	9 cut(s)	605, 725, 825, 1222, 1247, 1334, 1387, 1452, 1832
TatI	WGTACW	2 cut(s)	778, 1058
TfiI	GAWTC	2 cut(s)	463, 1130
Tru1I	TTAA	4 cut(s)	552, 1683, 1830, 1836
Tru9I	TTAA	4 cut(s)	552, 1683, 1830, 1836
TseFI	GTSAC	4 cut(s)	6, 288, 348, 751
TseI	GCWGC	6 cut(s)	373, 596, 707, 980, 1174, 1379
Tsp45I	GTSAC	4 cut(s)	6, 288, 348, 751
TspDTI	ATGAA	4 cut(s)	383, 926, 1475, 1590
TspGWI	ACGGA	3 cut(s)	151, 377, 631
VpaK11BI	GGWCC	3 cut(s)	30, 1117, 1420
XagI	CCTNNNNNAGG	1 cut(s)	104
XapI	RAATTY	1 cut(s)	1832
XceI	RCATGY	2 cut(s)	789, 1293
XhoI	CTCGAG	1 cut(s)	260
XspI	CTAG	2 cut(s)	66, 969
ZraI	GACGTC	1 cut(s)	348
ZrmI	AGTACT	1 cut(s)	1060
Zsp2I	ATGCAT	1 cut(s)	1855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.