Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011116

Physical Location & Seq

Genomic Coordinates Reverse (-)

28671570 .. 28674865

Gene Structure 3296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G286100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGCGACACAAATGGCGATCCTCGCACGCACGCGAACGCTGGCCAAAACCCTAAACCCGAACCCGGGATTCAAGACCATCACAACCTTCTCATTTCTCTCGCAGGAGCTCCAACTCGCCGAGCCAACTCATCCCATCCCCTCGACCCCGCTCCCTCCGAACCCAGCCTCCGGAAGCCCGTTGTACAACGAGAACTGGCGAAACCCGATCCCCAACTCGTCCATGACTCAGTCTCTGCTCCCCCTAGGGTTCCTTAACCAATCCCCTAGCTCTCGCATCCATGCCCTCTCGCAAACCCTAGACGTGCAGAGCCTAATGAATGTGTTCGCAGATTGGATGACCTCGCAGAGATGGGCAGACATGAAGCAGCTGTTCGAGTTTTGGATTCGGTCTCTGGACAAGAACGGGAAGCCCAATAAGCCCGATGTGAACTTGTATAACCATTACTTGAGGGCCAATTTGATGACCGGAGCCTCACCTGGGCAGATGCTCGATCTGGTCGGGCATATGGAGGACTATGGCGTCACGCCCAACACGGCGTCGTTTAATCTCGTCCTCAAGTCCATGCACCAGGCCAGAGAGATCGATGCAGCTGAGAAATTGCTCGAAAGGATGTTGCAGACAGGGAACGAATCTCCGCCTGATGATGAGTCATATGACTTGGTTGTCGGCATGCTGTTTCAAACGGACCGAATTGATGCGGCCTTGAAATATATAGATTTGACTTTAAAATCTGGTTATATGTTGTCAATGGCGGTGTTTAGAGATTGTGTACAAGGCTGTGCCGATAAGGGAAAGCTAGATATCTTGGTTTCAATAATTGACAAGTGCAAGTCAATGGATCAGAACAAAGCTCTTTGTCCGCCCTGGAATATGTGCAACTATATTGCAGAAGTTGCTCTGCAAGTTGATAACAGCAAGTTAGCATTTCATGCCCTGGAGTTTATGGCCAAATGGATTGCCAGGGGTGAGCAAGCAAGACCTGCTGTTTTTCTTTCTGTAGATGAAGGATTGCTTGTGTCGGCACTCGCAACTGCCGCTAGGACGCACAGTACTACTCTACTGGATGCATCATGGGCAATCTTACGGCGCTCATTGCGCCAAAAGAAGGCCCCTAATCCAGAATCTTACCGTGGGAAAATTTGTGCCCTTGCATCGCTAGGGAGTCTACAAAGAGCTTTTAGTACTCTTCATGAATATGAGTCTGCTTATGGCAATTCTGATAAAGAAGAGGAACTGTTCTCTCCATTTACCTCTTTACATCCTTTGGTCGTGGCATGCTCCAAGGGAGGTTTTGAAACTTTGGACTCAGTGTATTATCAACTAGAGAATTTGAGCCGTGCAGACCCTCCTTACAAGTCTGTTGCTGCTTTGAATTGCATCATATTAGGTTGCGCAAATATCTGGCACATCGAGCGAGCTTACCAAACTTTTGACGCAATTAGTTCCAGCTTTGAATTGACCCCTGATATTCATTCTTACAATTGTCTCATGTATGCTTTTGGAAAGTTCAAGCAGACTGTAGAAGCTTCAAACGTATTTGGGCACTTGGTAAGTCTGGGCGTCAAACCCAACGCGAAGTCATATTCGTTACTTGTAGATGCTCATCTTGTCAACAAAGATCCAAAATCTGCTCTCTCTGTGATTGATGACATGGTTAATGCTGGATTTGAACCAACAAGAGAAACATTGAAAAAGGTCAGAAGGCGATGTATGCGAGAGATGGATTATGAGAGTGATGATCGTGTAGATTCCTTGGCTAAAAGGTTCAAAATTCAATTGGGTTCAGAGAGTCGCAGGAACATTCTGTTTAATCTCAATTACAGCACTGGATATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

614

Amino Acids

68.56

Weight (kDa)

6.68

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26460
fragaria_vesca	FvH4_4g30160 FvH4_4g30160
malus_domestica	MD13G1063400.v1.1 MD16G1061800.v1.1
prunus_persica	Prupe.1G286100_v2.0.a1
pyrus_communis	pycom13g05570 pycom16g05390
rosa_chinensis	RchiOBHm_Chr4g0438491
rosa_laevigata	RLG00000006359
rosa_multiflora	Rmu_sc0002327.1_g000019 Rmu_sc0004398.1_g000003
rosa_roxburghii	Rroxscaffold_5G00379500
rosa_rugosa	Rorug04G0310300
rosa_samantha	Rh4AG361100 Rh4BG372400 Rh4CG386400 Rh4DG367200
rosa_wichuraiana	Rw0G006590 Rw0G016540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	521, 665
Acc16I	TGCGCA	1 cut(s)	1396
Acc36I	ACCTGC	1 cut(s)	991
AccBSI	CCGCTC	1 cut(s)	151
AccI	GTMKAC	1 cut(s)	1168
AccII	CGCG	2 cut(s)	34, 1577
AccIII	TCCGGA	1 cut(s)	170
AciI	CCGC	6 cut(s)	149, 638, 701, 755, 863, 1038
AclWI	GGATC	4 cut(s)	13, 202, 849, 1616
AcoI	YGGCCR	2 cut(s)	42, 948
AcsI	RAATTY	3 cut(s)	1140, 1330, 1773
AcyI	GRCGYC	3 cut(s)	522, 539, 1563
AfaI	GTAC	4 cut(s)	185, 774, 1054, 1186
AfiI	CCNNNNNNNGG	5 cut(s)	64, 65, 170, 480, 1108
AjiI	CACGTC	1 cut(s)	304
AjnI	CCWGG	5 cut(s)	478, 570, 866, 936, 962
AloI	GAACNNNNNNTCC	2 cut(s)	152, 184
Alw21I	GWGCWC	1 cut(s)	111
Alw26I	GTCTC	3 cut(s)	237, 396, 1493
AlwI	GGATC	4 cut(s)	13, 202, 849, 1616
AlwNI	CAGNNNCTG	1 cut(s)	235
Ama87I	CYCGRG	1 cut(s)	64
Aor13HI	TCCGGA	1 cut(s)	170
AoxI	GGCC	6 cut(s)	42, 453, 573, 702, 948, 1110
ApeKI	GCWGC	3 cut(s)	367, 590, 1367
ApoI	RAATTY	3 cut(s)	1140, 1330, 1773
Asp700I	GAANNNNTTC	1 cut(s)	323
AspA2I	CCTAGG	1 cut(s)	244
AspLEI	GCGC	3 cut(s)	1092, 1101, 1397
AspS9I	GGNCC	3 cut(s)	453, 688, 1111
AsuC2I	CCSGG	2 cut(s)	65, 66
AsuHPI	GGTGA	2 cut(s)	468, 980
AvaI	CYCGRG	1 cut(s)	64
AvaII	GGWCC	1 cut(s)	688
AvrII	CCTAGG	1 cut(s)	244
BaeGI	GKGCMC	2 cut(s)	1150, 1548
BalI	TGGCCA	2 cut(s)	44, 950
BanII	GRGCYC	1 cut(s)	111
Bbv12I	GWGCWC	1 cut(s)	111
BbvI	GCAGC	3 cut(s)	379, 602, 1354
BccI	CCATC	4 cut(s)	86, 143, 345, 1717
BceAI	ACGGC	3 cut(s)	552, 1103, 1323
BciT130I	CCWGG	5 cut(s)	480, 572, 868, 938, 964
BcnI	CCSGG	2 cut(s)	65, 66
BcoDI	GTCTC	3 cut(s)	237, 396, 1493
BfaI	CTAG	7 cut(s)	245, 267, 299, 800, 1041, 1160, 1325
BfmI	CTRYAG	2 cut(s)	999, 1521
BfoI	RGCGCY	1 cut(s)	1093
BfuAI	ACCTGC	1 cut(s)	991
BisI	GCNGC	5 cut(s)	368, 591, 702, 1038, 1368
BlnI	CCTAGG	1 cut(s)	244
BlsI	GCNGC	5 cut(s)	369, 592, 703, 1039, 1369
BmcAI	AGTACT	2 cut(s)	1054, 1186
Bme1390I	CCNGG	7 cut(s)	65, 66, 480, 572, 868, 938, 964
Bme18I	GGWCC	1 cut(s)	688
BmeT110I	CYCGRG	1 cut(s)	64
BmgBI	CACGTC	1 cut(s)	304
BmgT120I	GGNCC	3 cut(s)	453, 688, 1111
BmiI	GGNNCC	3 cut(s)	251, 472, 1113
BmrFI	CCNGG	7 cut(s)	65, 66, 480, 572, 868, 938, 964
BmsI	GCATC	9 cut(s)	285, 477, 577, 688, 1057, 1079, 1163, 1389, 1591
BpmI	CTGGAG	1 cut(s)	959
BpuEI	CTTGAG	2 cut(s)	469, 542
BpuMI	CCSGG	2 cut(s)	65, 66
Bsa29I	ATCGAT	1 cut(s)	585
BsaBI	GATNNNNATC	1 cut(s)	1605
BsaHI	GRCGYC	3 cut(s)	522, 539, 1563
BsaI	GGTCTC	1 cut(s)	396
BsaJI	CCNNGG	9 cut(s)	64, 244, 479, 866, 936, 963, 1132, 1284, 1755
BsaWI	WCCGGW	2 cut(s)	170, 467
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	5 cut(s)	64, 65, 170, 480, 1108
Bse1I	ACTGG	3 cut(s)	200, 1068, 1834
Bse3DI	GCAATG	1 cut(s)	1094
Bse8I	GATNNNNATC	1 cut(s)	1605
BseAI	TCCGGA	1 cut(s)	170
BseBI	CCWGG	5 cut(s)	480, 572, 868, 938, 964
BseCI	ATCGAT	1 cut(s)	585
BseDI	CCNNGG	9 cut(s)	64, 244, 479, 866, 936, 963, 1132, 1284, 1755
BseGI	GGATG	7 cut(s)	130, 135, 276, 342, 618, 1072, 1261
BseJI	GATNNNNATC	1 cut(s)	1605
BseLI	CCNNNNNNNGG	5 cut(s)	64, 65, 170, 480, 1108
BseMI	GCAATG	1 cut(s)	1094
BseMII	CTCAG	3 cut(s)	242, 585, 1323
BseNI	ACTGG	3 cut(s)	200, 1068, 1834
BseSI	GKGCMC	2 cut(s)	1150, 1548
BseXI	GCAGC	3 cut(s)	379, 602, 1354
BseYI	CCCAGC	1 cut(s)	163
BsgI	GTGCAG	2 cut(s)	326, 1362
Bsh1236I	CGCG	2 cut(s)	34, 1577
BshFI	GGCC	6 cut(s)	44, 455, 575, 704, 950, 1112
BshVI	ATCGAT	1 cut(s)	585
BsiHKAI	GWGCWC	1 cut(s)	111
BsiHKCI	CYCGRG	1 cut(s)	64
BsiSI	CCGG	3 cut(s)	65, 171, 468
BslI	CCNNNNNNNGG	5 cut(s)	64, 65, 170, 480, 1108
BsmAI	GTCTC	3 cut(s)	237, 396, 1493
BsnI	GGCC	6 cut(s)	44, 455, 575, 704, 950, 1112
Bso31I	GGTCTC	1 cut(s)	396
BsoBI	CYCGRG	1 cut(s)	64
Bsp1286I	GDGCHC	3 cut(s)	111, 1150, 1548
Bsp13I	TCCGGA	1 cut(s)	170
Bsp1407I	TGTACA	2 cut(s)	183, 772
Bsp143I	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
BspACI	CCGC	6 cut(s)	149, 638, 701, 755, 863, 1038
BspANI	GGCC	6 cut(s)	44, 455, 575, 704, 950, 1112
BspCNI	CTCAG	3 cut(s)	241, 586, 1322
BspDI	ATCGAT	1 cut(s)	585
BspEI	TCCGGA	1 cut(s)	170
BspFNI	CGCG	2 cut(s)	34, 1577
BspHI	TCATGA	1 cut(s)	1192
BspLI	GGNNCC	3 cut(s)	251, 472, 1113
BspMI	ACCTGC	1 cut(s)	991
BspPI	GGATC	4 cut(s)	13, 202, 849, 1616
BspTNI	GGTCTC	1 cut(s)	396
BsrBI	CCGCTC	1 cut(s)	151
BsrDI	GCAATG	1 cut(s)	1094
BsrGI	TGTACA	2 cut(s)	183, 772
BsrI	ACTGG	3 cut(s)	200, 1068, 1834
BssECI	CCNNGG	9 cut(s)	64, 244, 479, 866, 936, 963, 1132, 1284, 1755
BssMI	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
BssNI	GRCGYC	3 cut(s)	522, 539, 1563
BssT1I	CCWWGG	3 cut(s)	244, 1284, 1755
Bst2UI	CCWGG	5 cut(s)	480, 572, 868, 938, 964
Bst4CI	ACNGT	4 cut(s)	1052, 1133, 1239, 1522
Bst6I	CTCTTC	2 cut(s)	1194, 1224
BstACI	GRCGYC	3 cut(s)	522, 539, 1563
BstAPI	GCANNNNNTGC	3 cut(s)	896, 932, 983
BstAUI	TGTACA	2 cut(s)	183, 772
BstC8I	GCNNGC	7 cut(s)	28, 32, 42, 674, 975, 1279, 1419
BstDEI	CTNAG	3 cut(s)	228, 594, 1309
BstDSI	CCRYGG	1 cut(s)	1132
BstF5I	GGATG	7 cut(s)	130, 135, 276, 342, 618, 1072, 1261
BstFNI	CGCG	2 cut(s)	34, 1577
BstH2I	RGCGCY	1 cut(s)	1093
BstHHI	GCGC	3 cut(s)	1092, 1101, 1397
BstKTI	GATC	7 cut(s)	21, 210, 496, 585, 844, 1624, 1744
BstMAI	GTCTC	3 cut(s)	237, 396, 1493
BstMBI	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
BstNI	CCWGG	5 cut(s)	480, 572, 868, 938, 964
BstNSI	RCATGY	2 cut(s)	676, 1281
BstSCI	CCNGG	7 cut(s)	63, 64, 478, 570, 866, 936, 962
BstSFI	CTRYAG	2 cut(s)	999, 1521
BstSLI	GKGCMC	2 cut(s)	1150, 1548
BstUI	CGCG	2 cut(s)	34, 1577
BstV1I	GCAGC	3 cut(s)	379, 602, 1354
BstX2I	RGATCY	1 cut(s)	1621
BstYI	RGATCY	1 cut(s)	1621
Bsu15I	ATCGAT	1 cut(s)	585
BsuRI	GGCC	6 cut(s)	44, 455, 575, 704, 950, 1112
BsuTUI	ATCGAT	1 cut(s)	585
BtgI	CCRYGG	1 cut(s)	1132
BtgZI	GCGATG	2 cut(s)	1140, 1723
BtrI	CACGTC	1 cut(s)	304
BtsCI	GGATG	7 cut(s)	130, 135, 276, 342, 618, 1072, 1261
BtsIMutI	CAGTG	2 cut(s)	1317, 1827
BveI	ACCTGC	1 cut(s)	991
Cac8I	GCNNGC	7 cut(s)	28, 32, 42, 674, 975, 1279, 1419
CaiI	CAGNNNCTG	1 cut(s)	235
CciI	TCATGA	1 cut(s)	1192
CfoI	GCGC	3 cut(s)	1092, 1101, 1397
Cfr13I	GGNCC	3 cut(s)	453, 688, 1111
Cfr9I	CCCGGG	1 cut(s)	64
ClaI	ATCGAT	1 cut(s)	585
CpoI	CGGWCCG	1 cut(s)	688
CseI	GACGC	5 cut(s)	511, 528, 1054, 1445, 1552
Csp6I	GTAC	4 cut(s)	184, 773, 1053, 1185
CspI	CGGWCCG	1 cut(s)	688
CviQI	GTAC	4 cut(s)	184, 773, 1053, 1185
DdeI	CTNAG	3 cut(s)	228, 594, 1309
DpnI	GATC	7 cut(s)	20, 209, 495, 584, 843, 1623, 1743
DpnII	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
DraI	TTTAAA	1 cut(s)	729
DrdI	GACNNNNNNGTC	2 cut(s)	521, 665
DseDI	GACNNNNNNGTC	2 cut(s)	521, 665
EaeI	YGGCCR	2 cut(s)	42, 948
Eam1104I	CTCTTC	2 cut(s)	1194, 1224
EarI	CTCTTC	2 cut(s)	1194, 1224
EciI	GGCGGA	2 cut(s)	627, 852
Ecl136II	GAGCTC	1 cut(s)	109
Eco130I	CCWWGG	3 cut(s)	244, 1284, 1755
Eco24I	GRGCYC	1 cut(s)	111
Eco31I	GGTCTC	1 cut(s)	396
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	1 cut(s)	688
Eco53kI	GAGCTC	1 cut(s)	109
Eco88I	CYCGRG	1 cut(s)	64
EcoICRI	GAGCTC	1 cut(s)	109
EcoO109I	RGGNCCY	1 cut(s)	1111
EcoRII	CCWGG	5 cut(s)	478, 570, 866, 936, 962
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	3 cut(s)	244, 1284, 1755
EcoT22I	ATGCAT	1 cut(s)	1072
EcoT38I	GRGCYC	1 cut(s)	111
ErhI	CCWWGG	3 cut(s)	244, 1284, 1755
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FauI	CCCGC	1 cut(s)	156
FauNDI	CATATG	2 cut(s)	507, 655
FblI	GTMKAC	1 cut(s)	1168
Fnu4HI	GCNGC	5 cut(s)	368, 591, 702, 1038, 1368
FokI	GGATG	7 cut(s)	117, 122, 263, 349, 625, 1079, 1248
FriOI	GRGCYC	1 cut(s)	111
Fsp4HI	GCNGC	5 cut(s)	368, 591, 702, 1038, 1368
FspBI	CTAG	7 cut(s)	245, 267, 299, 800, 1041, 1160, 1325
FspI	TGCGCA	1 cut(s)	1396
GlaI	GCGC	3 cut(s)	1091, 1100, 1396
GluI	GCNGC	5 cut(s)	368, 591, 702, 1038, 1368
GsaI	CCCAGC	1 cut(s)	167
GsuI	CTGGAG	1 cut(s)	959
HaeII	RGCGCY	1 cut(s)	1093
HaeIII	GGCC	6 cut(s)	44, 455, 575, 704, 950, 1112
HapII	CCGG	3 cut(s)	65, 171, 468
HgaI	GACGC	5 cut(s)	511, 528, 1054, 1445, 1552
HhaI	GCGC	3 cut(s)	1092, 1101, 1397
Hin1I	GRCGYC	3 cut(s)	522, 539, 1563
Hin6I	GCGC	3 cut(s)	1090, 1099, 1395
HinP1I	GCGC	3 cut(s)	1090, 1099, 1395
HincII	GTYRAC	1 cut(s)	1615
HindII	GTYRAC	1 cut(s)	1615
HindIII	AAGCTT	1 cut(s)	1527
HpaII	CCGG	3 cut(s)	65, 171, 468
HphI	GGTGA	2 cut(s)	468, 980
Hpy166II	GTNNAC	4 cut(s)	430, 773, 1169, 1615
Hpy188I	TCNGA	5 cut(s)	159, 846, 1222, 1703, 1789
Hpy188III	TCNNGA	5 cut(s)	73, 171, 395, 1121, 1193
Hpy8I	GTNNAC	4 cut(s)	430, 773, 1169, 1615
Hpy99I	CGWCG	1 cut(s)	544
HpyAV	CCTTC	4 cut(s)	97, 1001, 1102, 1698
HpyCH4III	ACNGT	4 cut(s)	1052, 1133, 1239, 1522
HpyCH4IV	ACGT	2 cut(s)	303, 1536
HpyF3I	CTNAG	3 cut(s)	228, 594, 1309
HpySE526I	ACGT	2 cut(s)	303, 1536
Hsp92I	GRCGYC	3 cut(s)	522, 539, 1563
HspAI	GCGC	3 cut(s)	1090, 1099, 1395
Kpn2I	TCCGGA	1 cut(s)	170
Kzo9I	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
LmnI	GCTCC	6 cut(s)	106, 114, 156, 243, 470, 1286
Lsp1109I	GCAGC	3 cut(s)	379, 602, 1354
LweI	GCATC	9 cut(s)	285, 477, 577, 688, 1057, 1079, 1163, 1389, 1591
MaeI	CTAG	7 cut(s)	245, 267, 299, 800, 1041, 1160, 1325
MaeII	ACGT	2 cut(s)	303, 1536
MaeIII	GTNAC	2 cut(s)	523, 1590
MalI	GATC	7 cut(s)	20, 209, 495, 584, 843, 1623, 1743
MbiI	CCGCTC	1 cut(s)	151
MboI	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
MboII	GAAGA	2 cut(s)	1181, 1241
MfeI	CAATTG	2 cut(s)	1483, 1778
MflI	RGATCY	1 cut(s)	1621
MhlI	GDGCHC	3 cut(s)	111, 1150, 1548
MlsI	TGGCCA	2 cut(s)	44, 950
MluNI	TGGCCA	2 cut(s)	44, 950
MlyI	GAGTC	6 cut(s)	220, 659, 1174, 1211, 1301, 1801
MmeI	TCCRAC	1 cut(s)	136
Mox20I	TGGCCA	2 cut(s)	44, 950
Mph1103I	ATGCAT	1 cut(s)	1072
MroI	TCCGGA	1 cut(s)	170
MroXI	GAANNNNTTC	1 cut(s)	323
MscI	TGGCCA	2 cut(s)	44, 950
MseI	TTAA	5 cut(s)	255, 546, 728, 1659, 1812
MslI	CAYNNNNRTG	1 cut(s)	1197
Msp20I	TGGCCA	2 cut(s)	44, 950
MspA1I	CMGCKG	2 cut(s)	370, 593
MspI	CCGG	3 cut(s)	65, 171, 468
MspR9I	CCNGG	7 cut(s)	65, 66, 480, 572, 868, 938, 964
MunI	CAATTG	2 cut(s)	1483, 1778
MvaI	CCWGG	5 cut(s)	480, 572, 868, 938, 964
MvnI	CGCG	2 cut(s)	34, 1577
NciI	CCSGG	2 cut(s)	65, 66
NdeI	CATATG	2 cut(s)	507, 655
NdeII	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
NlaIV	GGNNCC	3 cut(s)	251, 472, 1113
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	1 cut(s)	523
NsbI	TGCGCA	1 cut(s)	1396
NsiI	ATGCAT	1 cut(s)	1072
NspI	RCATGY	2 cut(s)	676, 1281
PaeI	GCATGC	2 cut(s)	676, 1281
PagI	TCATGA	1 cut(s)	1192
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	5 cut(s)	69, 385, 632, 1124, 1751
PflFI	GACNNNGTC	1 cut(s)	229
PkrI	GCNGC	5 cut(s)	369, 592, 703, 1039, 1369
PleI	GAGTC	6 cut(s)	220, 658, 1173, 1210, 1301, 1800
PpsI	GAGTC	6 cut(s)	220, 658, 1173, 1210, 1301, 1800
Psp124BI	GAGCTC	1 cut(s)	111
Psp6I	CCWGG	5 cut(s)	478, 570, 866, 936, 962
PspFI	CCCAGC	1 cut(s)	163
PspGI	CCWGG	5 cut(s)	478, 570, 866, 936, 962
PspN4I	GGNNCC	3 cut(s)	251, 472, 1113
PspPI	GGNCC	3 cut(s)	453, 688, 1111
PstNI	CAGNNNCTG	1 cut(s)	235
PsuI	RGATCY	1 cut(s)	1621
PsyI	GACNNNGTC	1 cut(s)	229
PvuII	CAGCTG	2 cut(s)	370, 593
RsaI	GTAC	4 cut(s)	185, 774, 1054, 1186
RsaNI	GTAC	4 cut(s)	184, 773, 1053, 1185
RseI	CAYNNNNRTG	1 cut(s)	1197
Rsr2I	CGGWCCG	1 cut(s)	688
RsrII	CGGWCCG	1 cut(s)	688
SacI	GAGCTC	1 cut(s)	111
SaqAI	TTAA	5 cut(s)	255, 546, 728, 1659, 1812
SatI	GCNGC	5 cut(s)	368, 591, 702, 1038, 1368
Sau3AI	GATC	7 cut(s)	18, 207, 493, 582, 841, 1621, 1741
Sau96I	GGNCC	3 cut(s)	453, 688, 1111
ScaI	AGTACT	2 cut(s)	1054, 1186
SchI	GAGTC	6 cut(s)	220, 659, 1174, 1211, 1301, 1801
ScrFI	CCNGG	7 cut(s)	65, 66, 480, 572, 868, 938, 964
SduI	GDGCHC	3 cut(s)	111, 1150, 1548
SfaNI	GCATC	9 cut(s)	285, 477, 577, 688, 1057, 1079, 1163, 1389, 1591
SfcI	CTRYAG	2 cut(s)	999, 1521
SinI	GGWCC	1 cut(s)	688
SmaI	CCCGGG	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1197
SmlI	CTYRAG	2 cut(s)	448, 557
SmoI	CTYRAG	2 cut(s)	448, 557
SphI	GCATGC	2 cut(s)	676, 1281
SsiI	CCGC	6 cut(s)	149, 638, 701, 755, 863, 1038
SspMI	CTAG	7 cut(s)	245, 267, 299, 800, 1041, 1160, 1325
SstI	GAGCTC	1 cut(s)	111
StyD4I	CCNGG	7 cut(s)	63, 64, 478, 570, 866, 936, 962
StyI	CCWWGG	3 cut(s)	244, 1284, 1755
TaaI	ACNGT	4 cut(s)	1052, 1133, 1239, 1522
TaiI	ACGT	2 cut(s)	306, 1539
TaqI	TCGA	6 cut(s)	143, 375, 492, 585, 606, 1413
TaqII	GACCGA	2 cut(s)	378, 705
TatI	WGTACW	4 cut(s)	183, 772, 1052, 1184
TauI	GCSGC	2 cut(s)	704, 1040
TfiI	GAWTC	5 cut(s)	69, 385, 632, 1124, 1751
Tru1I	TTAA	5 cut(s)	255, 546, 728, 1659, 1812
Tru9I	TTAA	5 cut(s)	255, 546, 728, 1659, 1812
TscAI	CASTG	2 cut(s)	1317, 1834
TseFI	GTSAC	1 cut(s)	523
TseI	GCWGC	3 cut(s)	367, 590, 1367
Tsp45I	GTSAC	1 cut(s)	523
TspDTI	ATGAA	7 cut(s)	332, 377, 920, 1020, 1181, 1209, 1463
TspGWI	ACGGA	1 cut(s)	701
TspMI	CCCGGG	1 cut(s)	64
TspRI	CASTG	2 cut(s)	1317, 1834
Tth111I	GACNNNGTC	1 cut(s)	229
VpaK11BI	GGWCC	1 cut(s)	688
XapI	RAATTY	3 cut(s)	1140, 1330, 1773
XceI	RCATGY	2 cut(s)	676, 1281
XmaI	CCCGGG	1 cut(s)	64
XmaJI	CCTAGG	1 cut(s)	244
XmiI	GTMKAC	1 cut(s)	1168
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	7 cut(s)	245, 267, 299, 800, 1041, 1160, 1325
ZrmI	AGTACT	2 cut(s)	1054, 1186
Zsp2I	ATGCAT	1 cut(s)	1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.