Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0011116

Physical Location & Seq

Genomic Coordinates Forward (+)

63855627 .. 63859374

Gene Structure 3748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG386400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGCGTCCCAAATGGCGATCCTTGCCCGGACCCGATCCCTGGCCAAAACCCTAAACGCAAACCCCACCTTCTTCAAAACCATCACCACCTTCTCATTTCTCTCTCAGGAGCCCCAACTCGCCGCCGAGCCCACTCAGCCGGCGGCCCCCGAGGTCCCGCTCCCTCCCAACCCCACCTCATACCCCGAAAACTGGCGCACTCCGCCGTCCTCCGCCGCGTCGGCTCAGTCTCTGCTCCCCCTAGGGTTCCTCCAGCAATCCCCGAGCTTCCAAATCCAGTCCCTCTCGCAGGACCTGGACTCGCAGGGACTGCTCAACGTCTTCGCCGATTGGATGACGTCACAGAAGTGGACGCAGATGAAGCAGCTGTTTGAGCTCTGGATAAGGTCGCTGGACAAGAACGGCAAGCCCAATAAGCCCGATGTGAGCTCTTATAATCACTACCTCAGGGCCAATCTCATGAGCGGAGCCTCGCCGGCGGAGATGCTGGATCTGGTGGCCAGCATGGAGGACCACGGCGTCGAGCCCAACACGGCGTCGTTTAATCTCGTCCTCAAGGCTATGCACGGCGGCAAAGAGTCCGAAGCCGCCGAGAAATTGCTCCAACGGATGTTGCAGACAGGCAATGTAGCACCGCCTGACGATGAGTCCTACAACATAGTTGTGAGCTTGCTCTTGCAATCGCACAGAGTTGATGCGGCTTTGAAGTATATAGATTTGACTTTAAAGTCTGGTTATATGGTGTCAATGCAAGTGTTCAAAGATTGTGTACAGGGATGCGTCAATACGGGGAGGCTAGATAGTTTGGTTTCGATAATTGACAAGTGCAAGTCAATGGATCAGAACAAAGCTCTTTGTCCTCCCTGGAACTTGTGCAACTATATTGCGGACGTGGCTTTGCAGGCGGATAATAGCAAGTTGGCAGTTCATGCCCTGAAATTTATGGCCAATTGGATTGCTCGAGGTGAGCAATCAAGGCCGGCTATTTATCTTTCTGTAGATGAAGGATTGCTTCTGTCAGCACTTGCAACTGCTGGCAGGACATATAGTAGTACTTTAGTGGATGCGTCATGGGCAATCTTACTACGCTCATTGCGACAAAAGAAGGTCCCTAATCCTGAATCTTACCTTGCAAAGATATCTGCCCTTGCGTCGCTGGGGGAGCTGGAGAGAGCTTTTATTACTCTTCGTGAATTTGAGACTACTTATGCTAATTCCAGTAAAGAAGTAGAAGAGGAACTGTTCTCTCCATTCACCTCTTTATATCCATTGGTTGTGGCATGCTCCAAGACTGGTTTTGAAACTTTGGACTTGGTATGTTTTGATTCCCACTGCTATACTAAGTATCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

450

Amino Acids

49.75

Weight (kDa)

5.65

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26460
fragaria_vesca	FvH4_4g30160 FvH4_4g30160
malus_domestica	MD13G1063400.v1.1 MD16G1061800.v1.1
prunus_persica	Prupe.1G286100_v2.0.a1
pyrus_communis	pycom13g05570 pycom16g05390
rosa_chinensis	RchiOBHm_Chr4g0438491
rosa_laevigata	RLG00000006359
rosa_multiflora	Rmu_sc0002327.1_g000019 Rmu_sc0004398.1_g000003
rosa_roxburghii	Rroxscaffold_5G00379500
rosa_rugosa	Rorug04G0310300
rosa_samantha	Rh4AG361100 Rh4BG372400 Rh4CG386400 Rh4DG367200
rosa_wichuraiana	Rw0G006590 Rw0G016540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	435
AasI	GACNNNNNNGTC	2 cut(s)	518, 727
AatII	GACGTC	1 cut(s)	341
AccBSI	CCGCTC	2 cut(s)	160, 465
AccII	CGCG	1 cut(s)	218
AclWI	GGATC	4 cut(s)	13, 30, 498, 846
AcoI	YGGCCR	3 cut(s)	42, 498, 945
AcsI	RAATTY	2 cut(s)	938, 1193
AcyI	GRCGYC	4 cut(s)	5, 338, 519, 536
AfaI	GTAC	2 cut(s)	771, 1054
AfiI	CCNNNNNNNGG	3 cut(s)	40, 192, 289
AgsI	TTSAA	4 cut(s)	76, 706, 760, 1301
AhdI	GACNNNNNGTC	1 cut(s)	646
AjiI	CACGTC	1 cut(s)	892
AjnI	CCWGG	3 cut(s)	39, 294, 863
AleI	CACNNNNGTG	1 cut(s)	346
AluBI	AGCT	8 cut(s)	267, 367, 376, 429, 669, 851, 1165, 1175
AluI	AGCT	8 cut(s)	267, 367, 376, 429, 669, 851, 1165, 1175
Alw21I	GWGCWC	2 cut(s)	378, 431
Alw26I	GTCTC	2 cut(s)	234, 1193
AlwI	GGATC	4 cut(s)	13, 30, 498, 846
AlwNI	CAGNNNCTG	3 cut(s)	232, 295, 310
Ama87I	CYCGRG	3 cut(s)	149, 262, 960
AoxI	GGCC	6 cut(s)	42, 144, 450, 498, 945, 977
ApeKI	GCWGC	1 cut(s)	364
ApoI	RAATTY	2 cut(s)	938, 1193
AspA2I	CCTAGG	1 cut(s)	241
AspLEI	GCGC	1 cut(s)	198
AspS9I	GGNCC	7 cut(s)	30, 145, 154, 292, 450, 511, 1108
AsuC2I	CCSGG	1 cut(s)	28
AsuHPI	GGTGA	3 cut(s)	76, 977, 1246
AvaI	CYCGRG	3 cut(s)	149, 262, 960
AvaII	GGWCC	5 cut(s)	30, 154, 292, 511, 1108
AvrII	CCTAGG	1 cut(s)	241
AxyI	CCTNAGG	1 cut(s)	446
BalI	TGGCCA	3 cut(s)	44, 500, 947
BanII	GRGCYC	5 cut(s)	114, 132, 378, 431, 528
BbsI	GAAGAC	1 cut(s)	313
Bbv12I	GWGCWC	2 cut(s)	378, 431
BbvI	GCAGC	1 cut(s)	376
BccI	CCATC	1 cut(s)	89
BceAI	ACGGC	5 cut(s)	190, 418, 532, 549, 583
BciT130I	CCWGG	3 cut(s)	41, 296, 865
BcnI	CCSGG	1 cut(s)	28
BcoDI	GTCTC	2 cut(s)	234, 1193
BfaI	CTAG	2 cut(s)	242, 797
BfmI	CTRYAG	1 cut(s)	996
BglI	GCCNNNNNGGC	2 cut(s)	221, 476
BisI	GCNGC	7 cut(s)	123, 144, 216, 365, 571, 588, 699
BlnI	CCTAGG	1 cut(s)	241
BlsI	GCNGC	7 cut(s)	124, 145, 217, 366, 572, 589, 700
BmcAI	AGTACT	1 cut(s)	1054
Bme1390I	CCNGG	4 cut(s)	28, 41, 296, 865
Bme18I	GGWCC	5 cut(s)	30, 154, 292, 511, 1108
BmeRI	GACNNNNNGTC	1 cut(s)	646
BmeT110I	CYCGRG	3 cut(s)	149, 262, 960
BmgBI	CACGTC	1 cut(s)	892
BmgT120I	GGNCC	7 cut(s)	30, 145, 154, 292, 450, 511, 1108
BmiI	GGNNCC	7 cut(s)	32, 111, 147, 156, 248, 469, 1110
BmrFI	CCNGG	4 cut(s)	28, 41, 296, 865
BmsI	GCATC	4 cut(s)	474, 685, 767, 1054
BpiI	GAAGAC	1 cut(s)	313
BpmI	CTGGAG	2 cut(s)	236, 1187
BpuEI	CTTGAG	1 cut(s)	539
BpuMI	CCSGG	1 cut(s)	28
BsaHI	GRCGYC	4 cut(s)	5, 338, 519, 536
BsaJI	CCNNGG	5 cut(s)	39, 150, 241, 514, 863
Bsc4I	CCNNNNNNNGG	3 cut(s)	40, 192, 289
Bse118I	RCCGGY	3 cut(s)	139, 475, 979
Bse1I	ACTGG	4 cut(s)	197, 277, 1218, 1297
Bse21I	CCTNAGG	1 cut(s)	446
Bse3DI	GCAATG	2 cut(s)	631, 1091
BseBI	CCWGG	3 cut(s)	41, 296, 865
BseDI	CCNNGG	5 cut(s)	39, 150, 241, 514, 863
BseGI	GGATG	4 cut(s)	339, 615, 782, 1069
BseLI	CCNNNNNNNGG	3 cut(s)	40, 192, 289
BseMI	GCAATG	2 cut(s)	631, 1091
BseMII	CTCAG	4 cut(s)	119, 149, 239, 460
BseNI	ACTGG	4 cut(s)	197, 277, 1218, 1297
BseXI	GCAGC	1 cut(s)	376
BseYI	CCCAGC	1 cut(s)	1156
Bsh1236I	CGCG	1 cut(s)	218
BshFI	GGCC	6 cut(s)	44, 146, 452, 500, 947, 979
BsiHKAI	GWGCWC	2 cut(s)	378, 431
BsiHKCI	CYCGRG	3 cut(s)	149, 262, 960
BsiSI	CCGG	4 cut(s)	28, 140, 476, 980
BslFI	GGGAC	4 cut(s)	140, 265, 321, 1094
BslI	CCNNNNNNNGG	3 cut(s)	40, 192, 289
BsmAI	GTCTC	2 cut(s)	234, 1193
BsmFI	GGGAC	4 cut(s)	140, 265, 321, 1094
BsnI	GGCC	6 cut(s)	44, 146, 452, 500, 947, 979
BsoBI	CYCGRG	3 cut(s)	149, 262, 960
Bsp1286I	GDGCHC	5 cut(s)	114, 132, 378, 431, 528
Bsp1407I	TGTACA	1 cut(s)	769
Bsp143I	GATC	4 cut(s)	18, 35, 490, 838
BspANI	GGCC	6 cut(s)	44, 146, 452, 500, 947, 979
BspCNI	CTCAG	4 cut(s)	118, 148, 238, 459
BspFNI	CGCG	1 cut(s)	218
BspHI	TCATGA	1 cut(s)	459
BspLI	GGNNCC	7 cut(s)	32, 111, 147, 156, 248, 469, 1110
BspPI	GGATC	4 cut(s)	13, 30, 498, 846
BsrBI	CCGCTC	2 cut(s)	160, 465
BsrDI	GCAATG	2 cut(s)	631, 1091
BsrFI	RCCGGY	3 cut(s)	139, 475, 979
BsrGI	TGTACA	1 cut(s)	769
BsrI	ACTGG	4 cut(s)	197, 277, 1218, 1297
BssAI	RCCGGY	3 cut(s)	139, 475, 979
BssECI	CCNNGG	5 cut(s)	39, 150, 241, 514, 863
BssMI	GATC	4 cut(s)	18, 35, 490, 838
BssNI	GRCGYC	4 cut(s)	5, 338, 519, 536
BssT1I	CCWWGG	1 cut(s)	241
Bst2UI	CCWGG	3 cut(s)	41, 296, 865
Bst4CI	ACNGT	1 cut(s)	1242
Bst6I	CTCTTC	2 cut(s)	1191, 1227
BstACI	GRCGYC	4 cut(s)	5, 338, 519, 536
BstAPI	GCANNNNNTGC	2 cut(s)	310, 929
BstAUI	TGTACA	1 cut(s)	769
BstC8I	GCNNGC	9 cut(s)	141, 407, 477, 502, 671, 903, 981, 1036, 1282
BstDEI	CTNAG	5 cut(s)	105, 135, 225, 446, 1341
BstDSI	CCRYGG	1 cut(s)	514
BstENI	CCTNNNNNAGG	1 cut(s)	287
BstF5I	GGATG	4 cut(s)	339, 615, 782, 1069
BstFNI	CGCG	1 cut(s)	218
BstHHI	GCGC	1 cut(s)	198
BstKTI	GATC	4 cut(s)	21, 38, 493, 841
BstMAI	GTCTC	2 cut(s)	234, 1193
BstMBI	GATC	4 cut(s)	18, 35, 490, 838
BstNI	CCWGG	3 cut(s)	41, 296, 865
BstNSI	RCATGY	1 cut(s)	1284
BstSCI	CCNGG	4 cut(s)	26, 39, 294, 863
BstSFI	CTRYAG	1 cut(s)	996
BstUI	CGCG	1 cut(s)	218
BstV1I	GCAGC	1 cut(s)	376
BstV2I	GAAGAC	1 cut(s)	313
BstX2I	RGATCY	1 cut(s)	490
BstYI	RGATCY	1 cut(s)	490
Bsu36I	CCTNAGG	1 cut(s)	446
BsuRI	GGCC	6 cut(s)	44, 146, 452, 500, 947, 979
BtgI	CCRYGG	1 cut(s)	514
BtrI	CACGTC	1 cut(s)	892
BtsCI	GGATG	4 cut(s)	339, 615, 782, 1069
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	1 cut(s)	1330
Cac8I	GCNNGC	9 cut(s)	141, 407, 477, 502, 671, 903, 981, 1036, 1282
CaiI	CAGNNNCTG	3 cut(s)	232, 295, 310
CciI	TCATGA	1 cut(s)	459
CfoI	GCGC	1 cut(s)	198
Cfr10I	RCCGGY	3 cut(s)	139, 475, 979
Cfr13I	GGNCC	7 cut(s)	30, 145, 154, 292, 450, 511, 1108
CseI	GACGC	7 cut(s)	207, 361, 508, 525, 769, 1056, 1140
Csp6I	GTAC	2 cut(s)	770, 1053
CviAII	CATG	5 cut(s)	460, 505, 929, 1071, 1281
CviQI	GTAC	2 cut(s)	770, 1053
DdeI	CTNAG	5 cut(s)	105, 135, 225, 446, 1341
DpnI	GATC	4 cut(s)	20, 37, 492, 840
DpnII	GATC	4 cut(s)	18, 35, 490, 838
DraI	TTTAAA	1 cut(s)	726
DrdI	GACNNNNNNGTC	2 cut(s)	518, 727
DriI	GACNNNNNGTC	1 cut(s)	646
DseDI	GACNNNNNNGTC	2 cut(s)	518, 727
EaeI	YGGCCR	3 cut(s)	42, 498, 945
Eam1104I	CTCTTC	2 cut(s)	1191, 1227
Eam1105I	GACNNNNNGTC	1 cut(s)	646
EarI	CTCTTC	2 cut(s)	1191, 1227
EciI	GGCGGA	4 cut(s)	192, 202, 494, 920
Ecl136II	GAGCTC	2 cut(s)	376, 429
Eco130I	CCWWGG	1 cut(s)	241
Eco24I	GRGCYC	5 cut(s)	114, 132, 378, 431, 528
Eco32I	GATATC	1 cut(s)	1140
Eco47I	GGWCC	5 cut(s)	30, 154, 292, 511, 1108
Eco53kI	GAGCTC	2 cut(s)	376, 429
Eco81I	CCTNAGG	1 cut(s)	446
Eco88I	CYCGRG	3 cut(s)	149, 262, 960
EcoICRI	GAGCTC	2 cut(s)	376, 429
EcoNI	CCTNNNNNAGG	1 cut(s)	287
EcoO109I	RGGNCCY	3 cut(s)	154, 292, 1108
EcoRII	CCWGG	3 cut(s)	39, 294, 863
EcoRV	GATATC	1 cut(s)	1140
EcoT14I	CCWWGG	1 cut(s)	241
EcoT38I	GRGCYC	5 cut(s)	114, 132, 378, 431, 528
ErhI	CCWWGG	1 cut(s)	241
FaeI	CATG	5 cut(s)	463, 508, 932, 1074, 1284
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FaqI	GGGAC	4 cut(s)	140, 265, 321, 1094
FatI	CATG	5 cut(s)	459, 504, 928, 1070, 1280
FauI	CCCGC	1 cut(s)	165
Fnu4HI	GCNGC	7 cut(s)	123, 144, 216, 365, 571, 588, 699
FokI	GGATG	4 cut(s)	346, 622, 789, 1076
FriOI	GRGCYC	5 cut(s)	114, 132, 378, 431, 528
Fsp4HI	GCNGC	7 cut(s)	123, 144, 216, 365, 571, 588, 699
FspBI	CTAG	2 cut(s)	242, 797
GlaI	GCGC	1 cut(s)	197
GluI	GCNGC	7 cut(s)	123, 144, 216, 365, 571, 588, 699
GsaI	CCCAGC	1 cut(s)	1160
GsuI	CTGGAG	2 cut(s)	236, 1187
HaeIII	GGCC	6 cut(s)	44, 146, 452, 500, 947, 979
HapII	CCGG	4 cut(s)	28, 140, 476, 980
HgaI	GACGC	7 cut(s)	207, 361, 508, 525, 769, 1056, 1140
HhaI	GCGC	1 cut(s)	198
Hin1I	GRCGYC	4 cut(s)	5, 338, 519, 536
Hin1II	CATG	5 cut(s)	463, 508, 932, 1074, 1284
Hin6I	GCGC	1 cut(s)	196
HinP1I	GCGC	1 cut(s)	196
HinfI	GANTC	5 cut(s)	299, 578, 647, 1121, 1325
HpaII	CCGG	4 cut(s)	28, 140, 476, 980
HphI	GGTGA	3 cut(s)	76, 977, 1246
Hpy166II	GTNNAC	2 cut(s)	351, 770
Hpy188I	TCNGA	2 cut(s)	583, 843
Hpy188III	TCNNGA	5 cut(s)	107, 379, 460, 1118, 1190
Hpy8I	GTNNAC	2 cut(s)	351, 770
Hpy99I	CGWCG	4 cut(s)	223, 524, 541, 1156
HpyAV	CCTTC	4 cut(s)	79, 100, 998, 1099
HpyCH4III	ACNGT	1 cut(s)	1242
HpyCH4IV	ACGT	3 cut(s)	318, 338, 891
HpyCH4V	TGCA	9 cut(s)	565, 616, 679, 751, 828, 876, 901, 1028, 1133
HpyF3I	CTNAG	5 cut(s)	105, 135, 225, 446, 1341
HpySE526I	ACGT	3 cut(s)	318, 338, 891
Hsp92I	GRCGYC	4 cut(s)	5, 338, 519, 536
Hsp92II	CATG	5 cut(s)	463, 508, 932, 1074, 1284
HspAI	GCGC	1 cut(s)	196
KroI	GCCGGC	3 cut(s)	139, 475, 979
KroNI	GCCGGC	3 cut(s)	141, 477, 981
Kzo9I	GATC	4 cut(s)	18, 35, 490, 838
LmnI	GCTCC	7 cut(s)	109, 165, 240, 467, 606, 1162, 1289
Lsp1109I	GCAGC	1 cut(s)	376
LweI	GCATC	4 cut(s)	474, 685, 767, 1054
MaeI	CTAG	2 cut(s)	242, 797
MaeII	ACGT	3 cut(s)	318, 338, 891
MaeIII	GTNAC	1 cut(s)	339
MalI	GATC	4 cut(s)	20, 37, 492, 840
MbiI	CCGCTC	2 cut(s)	160, 465
MboI	GATC	4 cut(s)	18, 35, 490, 838
MboII	GAAGA	4 cut(s)	64, 313, 1178, 1244
MfeI	CAATTG	1 cut(s)	949
MflI	RGATCY	1 cut(s)	490
MhlI	GDGCHC	5 cut(s)	114, 132, 378, 431, 528
MlsI	TGGCCA	3 cut(s)	44, 500, 947
MluCI	AATT	6 cut(s)	596, 816, 938, 949, 1193, 1213
MluNI	TGGCCA	3 cut(s)	44, 500, 947
MlyI	GAGTC	3 cut(s)	293, 587, 656
MmeI	TCCRAC	1 cut(s)	628
Mox20I	TGGCCA	3 cut(s)	44, 500, 947
MreI	CGCCGGCG	1 cut(s)	475
MroNI	GCCGGC	3 cut(s)	139, 475, 979
MscI	TGGCCA	3 cut(s)	44, 500, 947
MseI	TTAA	2 cut(s)	543, 725
MslI	CAYNNNNRTG	2 cut(s)	346, 662
Msp20I	TGGCCA	3 cut(s)	44, 500, 947
MspA1I	CMGCKG	1 cut(s)	367
MspI	CCGG	4 cut(s)	28, 140, 476, 980
MspR9I	CCNGG	4 cut(s)	28, 41, 296, 865
MunI	CAATTG	1 cut(s)	949
MvaI	CCWGG	3 cut(s)	41, 296, 865
MvnI	CGCG	1 cut(s)	218
NaeI	GCCGGC	3 cut(s)	141, 477, 981
NciI	CCSGG	1 cut(s)	28
NdeII	GATC	4 cut(s)	18, 35, 490, 838
NgoMIV	GCCGGC	3 cut(s)	139, 475, 979
NlaIII	CATG	5 cut(s)	463, 508, 932, 1074, 1284
NlaIV	GGNNCC	7 cut(s)	32, 111, 147, 156, 248, 469, 1110
NmeAIII	GCCGAG	2 cut(s)	151, 616
NmuCI	GTSAC	1 cut(s)	339
NspI	RCATGY	1 cut(s)	1284
OliI	CACNNNNGTG	1 cut(s)	346
PaeI	GCATGC	1 cut(s)	1284
PaeR7I	CTCGAG	1 cut(s)	960
PagI	TCATGA	1 cut(s)	459
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 1093
PdiI	GCCGGC	3 cut(s)	141, 477, 981
PfeI	GAWTC	2 cut(s)	1121, 1325
PkrI	GCNGC	7 cut(s)	124, 145, 217, 366, 572, 589, 700
PleI	GAGTC	3 cut(s)	293, 586, 655
PpsI	GAGTC	3 cut(s)	293, 586, 655
PpuMI	RGGWCCY	3 cut(s)	154, 292, 1108
PsiI	TTATAA	1 cut(s)	435
Psp124BI	GAGCTC	2 cut(s)	378, 431
Psp5II	RGGWCCY	3 cut(s)	154, 292, 1108
Psp6I	CCWGG	3 cut(s)	39, 294, 863
PspFI	CCCAGC	1 cut(s)	1156
PspGI	CCWGG	3 cut(s)	39, 294, 863
PspN4I	GGNNCC	7 cut(s)	32, 111, 147, 156, 248, 469, 1110
PspPI	GGNCC	7 cut(s)	30, 145, 154, 292, 450, 511, 1108
PspPPI	RGGWCCY	3 cut(s)	154, 292, 1108
PspXI	VCTCGAGB	1 cut(s)	960
PstNI	CAGNNNCTG	3 cut(s)	232, 295, 310
PsuI	RGATCY	1 cut(s)	490
PvuII	CAGCTG	1 cut(s)	367
RsaI	GTAC	2 cut(s)	771, 1054
RsaNI	GTAC	2 cut(s)	770, 1053
RseI	CAYNNNNRTG	2 cut(s)	346, 662
SacI	GAGCTC	2 cut(s)	378, 431
SaqAI	TTAA	2 cut(s)	543, 725
SatI	GCNGC	7 cut(s)	123, 144, 216, 365, 571, 588, 699
Sau3AI	GATC	4 cut(s)	18, 35, 490, 838
Sau96I	GGNCC	7 cut(s)	30, 145, 154, 292, 450, 511, 1108
ScaI	AGTACT	1 cut(s)	1054
SchI	GAGTC	3 cut(s)	293, 587, 656
ScrFI	CCNGG	4 cut(s)	28, 41, 296, 865
SduI	GDGCHC	5 cut(s)	114, 132, 378, 431, 528
SfaNI	GCATC	4 cut(s)	474, 685, 767, 1054
SfcI	CTRYAG	1 cut(s)	996
Sfr274I	CTCGAG	1 cut(s)	960
SgrAI	CRCCGGYG	1 cut(s)	475
SinI	GGWCC	5 cut(s)	30, 154, 292, 511, 1108
SlaI	CTCGAG	1 cut(s)	960
SmiMI	CAYNNNNRTG	2 cut(s)	346, 662
SmlI	CTYRAG	2 cut(s)	554, 960
SmoI	CTYRAG	2 cut(s)	554, 960
SphI	GCATGC	1 cut(s)	1284
Sse9I	AATT	6 cut(s)	596, 816, 938, 949, 1193, 1213
SspMI	CTAG	2 cut(s)	242, 797
SstI	GAGCTC	2 cut(s)	378, 431
StyD4I	CCNGG	4 cut(s)	26, 39, 294, 863
StyI	CCWWGG	1 cut(s)	241
TaaI	ACNGT	1 cut(s)	1242
TaiI	ACGT	3 cut(s)	321, 341, 894
TaqI	TCGA	3 cut(s)	522, 812, 961
TasI	AATT	6 cut(s)	596, 816, 938, 949, 1193, 1213
TatI	WGTACW	2 cut(s)	769, 1052
TauI	GCSGC	6 cut(s)	125, 146, 218, 573, 590, 701
TfiI	GAWTC	2 cut(s)	1121, 1325
Tru1I	TTAA	2 cut(s)	543, 725
Tru9I	TTAA	2 cut(s)	543, 725
TscAI	CASTG	1 cut(s)	1337
TseFI	GTSAC	1 cut(s)	339
TseI	GCWGC	1 cut(s)	364
Tsp45I	GTSAC	1 cut(s)	339
TspDTI	ATGAA	3 cut(s)	374, 917, 1017
TspGWI	ACGGA	1 cut(s)	622
TspRI	CASTG	1 cut(s)	1337
VpaK11BI	GGWCC	5 cut(s)	30, 154, 292, 511, 1108
XagI	CCTNNNNNAGG	1 cut(s)	287
XapI	RAATTY	2 cut(s)	938, 1193
XceI	RCATGY	1 cut(s)	1284
XhoI	CTCGAG	1 cut(s)	960
XmaJI	CCTAGG	1 cut(s)	241
XspI	CTAG	2 cut(s)	242, 797
ZraI	GACGTC	1 cut(s)	339
ZrmI	AGTACT	1 cut(s)	1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.