Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0015839

Physical Location & Seq

Genomic Coordinates Forward (+)

31703975 .. 31706961

Gene Structure 2987 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g33490.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGCGATGCCGAAGAAACACGAAGGAGAAGAAGAAGAAGAAGAGGTTCAGAACTTCGGGAAGAGACTGAAATGCATCAAACACGAGGAGGTTCAATACCAACAAGATGATGAAGAAGAAGAAGAAGAAGACGAGATGAAGGCAGAGATGGTGAGTATGTACCCAATGACACCCACATCGTTTGTGGTCTCGGATGCTCTAGAGCCCGATTGTCCCATCATTTACGTCAACAAAGTGTTCGAGACTTTCACCGGATACGGAGCTCATGAAGTCCTCGGTCGCAACTGTCGGTTCTTACAATATAGGGACCCTCATGCTCAAAGACGACATCCTCTGGTGGATCCTGATGTAGTTTCTGAGATTAGAAGGTGTCTTGAAGAAGGAGTTGAGTTCTTGGGTGAGCTTCTTAACTTCAGTAAGGATGGCACTCCCCTAGTGAATAGGCTAAGGCTGAAACCAATAGTTGATGATAGCGGAACTGTCACACACATCATAGGCATTCAAGTGTTTTTTGAAACAAAAATAGACCTCAACAGTGTATCATATCCAGTTTACAAAGAGACATGCTCTGAGCAGGACACTCAATCCAGCAAGTATTTTCTCACCAGTGGACAAACGCCTTTCACCCAACATCAAGAAATTTGTGGGATTCTTCAGCTCTCAGATGAAGTGTTGGCTCACAACATCTTATCGCGCTTGACTCCGAGGGATGTGGCATCCATTGGGTCTGTCTGTAGAAGAATCCGTCAACTGACAAAAAATGAGCATGTGAGGAAGATGGTATGTCAAAATGCATGGGGGAGAGAAGTCACCGGTACTTTGGAATTGATGACTGATAAGTTAGGGTGGGGGCGTCTGGCTAGGGAACTGACAACTCTTGAGGCTGTTTGTTGGAGGAAATTTACTGTTGGAGGTTCGGTGGAGCCTTCTCGGTGCAACTTTAGTGCCTGTGCTGTGGGAAATCGACTTGTACTGTTTGGAGGCGAAGGTGTTGATATGCAGCCAATGGATGACACATTTGTTCTCAATCTAGATGCTTCCAATCCAGAGTGGACTCGAGTAAGTGTGAAATCATCGCCACCAGGGCGATGGGGACACACTCTTTCATGTTTGAATGGTTCTTTGTTGGTAGTGTTTGGGGGATGCGGGCGGCAAGGGTTGCTCAATGATGTTTTTGTTCTTGACTTGGATGCCAAGCAGCCAACATGGAAAGAAGTTCATGGAGGAACTCCTCCTCTCCCTAGATCCTGGCATAGTTCTTGCACGATAGAAGGTTCTAAATTAGTTGTGTCAGGTGGATGCACGGATGGTGGGATACTCCTTAGCGACACATACGTATTGGATCTCACCAGAGGCAATCCAACATGGAGAGAGATTCCAACTTCGTGGTCTCCTCCCTGTAGGTTGGGACATTCGCTTTCAGTTTATGGCAGATCAAAGATTCTCATGTTTGGTGGACTTGCCAACAGTGGGCACTTACGGTTGAGATCAGGTGAGACTTACACCATTGATTTGGAAGACGAAGAGCCTCAATGGAGGCAACTGGAATGTAATGCATTCACCAGCATTGACAGCCAGAGTGCAGTGCTTCCTCCTCCTAGACTCGATCATGTTGCTATGAGCATGCCTTGTGGAAGGATTATCATATTTGGTGGTTCAATTGCTGGGCTGCATTCTCCTTCTCAGCTTTTCCTTTTGGATCCTTCTGAAGAGAAACCGTCATGGAGAATTCTGAACGTTCCCGGGCAACCACCTAAATTTGCTTGGGGTCACAGCACCTGTGTGGTCGGAGGGACAAGGGTCCTGGTGTTGGGTGGCCACACAGGTGAGGAGTGGATACTTAATGACTTGCATGAGTTGTGCTTAGCAAGCAGGCAGGACTCAGAGTCAGATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

F-box Kelch_2 Kelch_4 PAS_9

Protein Analysis

633

Amino Acids

70.49

Weight (kDa)

5.26

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAS_9	PF13426	67 - 168	5.2e-16	PAS domain
PAS	PF00989	73 - 167	5.7e-07	PAS fold
PAS_3	PF08447	73 - 167	3.2e-06	PAS fold
Kelch_KLHDC2_KLHL20_DRC7	PF24681	292 - 486	1.7e-38	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	297 - 451	2.5e-25	FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1	PF24981	298 - 434	4.5e-10	Attractin/LZTR1 beta-propeller
Beta-prop_TYW4	PF13418	310 - 553	7.7e-12	tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	325 - 516	6.5e-16	Attractin/LZTR1 beta-propeller
Kelch_HCF	PF13854	349 - 607	2.8e-17	Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	397 - 518	6.9e-17	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	470 - 626	6.6e-17	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	520 - 624	8.8e-12	FBX42, beta-propeller domain
Kelch_2	PF07646	535 - 582	1.3e-07	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68050
fragaria_vesca	FvH4_4g33490
malus_domestica	MD16G1018000.v1.1
prunus_persica	Prupe.1G334000_v2.0.a1
pyrus_communis	pycom16g01630
rosa_chinensis	RchiOBHm_Chr4g0442801
rosa_laevigata	RLG00000005983
rosa_multiflora	Rmu_ssc0000204.1_g000019
rosa_roxburghii	Rroxscaffold_5G00383580
rosa_rugosa	Rorug04G0343300
rosa_samantha	Rh4AG395800 Rh4BG408700 Rh4CG424300 Rh4DG402800
rosa_wichuraiana	Rw4G034210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	694
AciI	CCGC	3 cut(s)	474, 1146, 1150
AclI	AACGTT	1 cut(s)	1737
AclWI	GGATC	6 cut(s)	335, 348, 1239, 1350, 1694, 1707
AcoI	YGGCCR	1 cut(s)	1816
AcsI	RAATTY	4 cut(s)	639, 899, 1728, 1757
AcuI	CTGAAG	3 cut(s)	397, 638, 1728
AcyI	GRCGYC	1 cut(s)	853
AfaI	GTAC	3 cut(s)	161, 817, 972
AfiI	CCNNNNNNNGG	2 cut(s)	1470, 1810
AgeI	ACCGGT	1 cut(s)	812
AgsI	TTSAA	6 cut(s)	95, 377, 503, 515, 1114, 1659
AhdI	GACNNNNNGTC	1 cut(s)	1885
AjnI	CCWGG	3 cut(s)	1081, 1247, 1803
AleI	CACNNNNGTG	2 cut(s)	1781, 1824
AluBI	AGCT	4 cut(s)	263, 403, 658, 1687
AluI	AGCT	4 cut(s)	263, 403, 658, 1687
Alw21I	GWGCWC	1 cut(s)	265
Alw26I	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
AlwI	GGATC	6 cut(s)	335, 348, 1239, 1350, 1694, 1707
AlwNI	CAGNNNCTG	1 cut(s)	1779
Ama87I	CYCGRG	2 cut(s)	1056, 1742
AoxI	GGCC	1 cut(s)	1816
ApeKI	GCWGC	3 cut(s)	1000, 1198, 1669
ApoI	RAATTY	4 cut(s)	639, 899, 1728, 1757
AsiGI	ACCGGT	1 cut(s)	812
Asp700I	GAANNNNTTC	1 cut(s)	45
AspLEI	GCGC	1 cut(s)	696
AspS9I	GGNCC	2 cut(s)	307, 1801
AsuC2I	CCSGG	2 cut(s)	1743, 1744
AvaI	CYCGRG	2 cut(s)	1056, 1742
AvaII	GGWCC	2 cut(s)	307, 1801
BaeGI	GKGCMC	1 cut(s)	1476
BalI	TGGCCA	1 cut(s)	1818
BamHI	GGATCC	2 cut(s)	340, 1699
BanII	GRGCYC	2 cut(s)	207, 265
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	2 cut(s)	135, 1524
Bbv12I	GWGCWC	1 cut(s)	265
BbvI	GCAGC	3 cut(s)	1012, 1210, 1656
BccI	CCATC	6 cut(s)	142, 224, 416, 772, 1083, 1301
BcgI	CGANNNNNNTGC	2 cut(s)	1595, 1629
BciT130I	CCWGG	3 cut(s)	1083, 1249, 1805
BciVI	GTATCC	3 cut(s)	248, 1308, 1830
BcnI	CCSGG	2 cut(s)	1743, 1744
BcoDI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BfaI	CTAG	6 cut(s)	200, 434, 861, 1031, 1242, 1599
BfmI	CTRYAG	2 cut(s)	733, 1399
BfuI	GTATCC	3 cut(s)	248, 1308, 1830
BglI	GCCNNNNNGGC	1 cut(s)	1084
BglII	AGATCT	1 cut(s)	1891
BisI	GCNGC	4 cut(s)	1001, 1151, 1199, 1670
BlpI	GCTNAGC	1 cut(s)	1864
BlsI	GCNGC	4 cut(s)	1002, 1152, 1200, 1671
Bme1390I	CCNGG	5 cut(s)	1083, 1249, 1743, 1744, 1805
Bme18I	GGWCC	2 cut(s)	307, 1801
BmeRI	GACNNNNNGTC	1 cut(s)	1885
BmeT110I	CYCGRG	2 cut(s)	1056, 1742
BmgT120I	GGNCC	2 cut(s)	307, 1801
BmiI	GGNNCC	6 cut(s)	308, 309, 342, 924, 1701, 1802
BmrFI	CCNGG	5 cut(s)	1083, 1249, 1743, 1744, 1805
BmsI	GCATC	7 cut(s)	84, 184, 725, 1024, 1133, 1180, 1289
BoxI	GACNNNNGTC	1 cut(s)	1799
BpiI	GAAGAC	2 cut(s)	135, 1524
BplI	GAGNNNNNCTC	2 cut(s)	551, 583
Bpu10I	CCTNAGC	2 cut(s)	446, 1322
Bpu1102I	GCTNAGC	1 cut(s)	1864
BpuEI	CTTGAG	1 cut(s)	899
BpuMI	CCSGG	2 cut(s)	1743, 1744
BsaAI	YACGTR	1 cut(s)	1336
BsaHI	GRCGYC	1 cut(s)	853
BsaI	GGTCTC	2 cut(s)	193, 1395
BsaJI	CCNNGG	4 cut(s)	274, 704, 1082, 1742
BsaWI	WCCGGW	2 cut(s)	251, 812
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	2 cut(s)	1470, 1810
Bse118I	RCCGGY	1 cut(s)	812
Bse1I	ACTGG	3 cut(s)	548, 606, 1548
BseBI	CCWGG	3 cut(s)	1083, 1249, 1805
BseDI	CCNNGG	4 cut(s)	274, 704, 1082, 1742
BseLI	CCNNNNNNNGG	2 cut(s)	1470, 1810
BseMII	CTCAG	5 cut(s)	348, 561, 675, 1697, 1896
BseNI	ACTGG	3 cut(s)	548, 606, 1548
BseRI	GAGGAG	6 cut(s)	101, 1221, 1224, 1383, 1584, 1844
BseSI	GKGCMC	1 cut(s)	1476
BseXI	GCAGC	3 cut(s)	1012, 1210, 1656
BseYI	CCCAGC	1 cut(s)	1664
BsgI	GTGCAG	1 cut(s)	1602
Bsh1236I	CGCG	1 cut(s)	694
Bsh1285I	CGRYCG	1 cut(s)	280
BshFI	GGCC	1 cut(s)	1818
BshTI	ACCGGT	1 cut(s)	812
BsiEI	CGRYCG	1 cut(s)	280
BsiHKAI	GWGCWC	1 cut(s)	265
BsiHKCI	CYCGRG	2 cut(s)	1056, 1742
BsiSI	CCGG	3 cut(s)	252, 813, 1743
BslFI	GGGAC	5 cut(s)	198, 320, 1107, 1422, 1807
BslI	CCNNNNNNNGG	2 cut(s)	1470, 1810
BsmAI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BsmFI	GGGAC	5 cut(s)	198, 320, 1107, 1422, 1807
BsmI	GAATGC	3 cut(s)	498, 1556, 1672
BsnI	GGCC	1 cut(s)	1818
Bso31I	GGTCTC	2 cut(s)	193, 1395
BsoBI	CYCGRG	2 cut(s)	1056, 1742
Bsp1286I	GDGCHC	3 cut(s)	207, 265, 1476
Bsp143I	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
Bsp1720I	GCTNAGC	1 cut(s)	1864
BspACI	CCGC	3 cut(s)	474, 1146, 1150
BspANI	GGCC	1 cut(s)	1818
BspCNI	CTCAG	5 cut(s)	349, 562, 674, 1696, 1895
BspFNI	CGCG	1 cut(s)	694
BspHI	TCATGA	1 cut(s)	265
BspLI	GGNNCC	6 cut(s)	308, 309, 342, 924, 1701, 1802
BspPI	GGATC	6 cut(s)	335, 348, 1239, 1350, 1694, 1707
BspQI	GCTCTTC	1 cut(s)	1518
BspTNI	GGTCTC	2 cut(s)	193, 1395
BsrFI	RCCGGY	1 cut(s)	812
BsrI	ACTGG	3 cut(s)	548, 606, 1548
BssAI	RCCGGY	1 cut(s)	812
BssECI	CCNNGG	4 cut(s)	274, 704, 1082, 1742
BssMI	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
BssNI	GRCGYC	1 cut(s)	853
BssSI	CACGAG	1 cut(s)	83
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	3 cut(s)	1083, 1249, 1805
Bst4CI	ACNGT	8 cut(s)	287, 481, 536, 907, 975, 1469, 1482, 1719
Bst6I	CTCTTC	4 cut(s)	36, 56, 1518, 1704
BstACI	GRCGYC	1 cut(s)	853
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstBAI	YACGTR	1 cut(s)	1336
BstC8I	GCNNGC	4 cut(s)	1148, 1625, 1870, 1874
BstDEI	CTNAG	8 cut(s)	357, 446, 570, 661, 1322, 1683, 1864, 1882
BstFNI	CGCG	1 cut(s)	694
BstHHI	GCGC	1 cut(s)	696
BstKTI	GATC	8 cut(s)	343, 1247, 1345, 1436, 1490, 1609, 1702, 1894
BstMAI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BstMBI	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
BstMCI	CGRYCG	1 cut(s)	280
BstMWI	GCNNNNNNNGC	4 cut(s)	1084, 1159, 1572, 1869
BstNI	CCWGG	3 cut(s)	1083, 1249, 1805
BstNSI	RCATGY	3 cut(s)	567, 770, 1627
BstPAI	GACNNNNGTC	1 cut(s)	1799
BstSCI	CCNGG	5 cut(s)	1081, 1247, 1741, 1742, 1803
BstSFI	CTRYAG	2 cut(s)	733, 1399
BstSLI	GKGCMC	1 cut(s)	1476
BstSNI	TACGTA	1 cut(s)	1336
BstUI	CGCG	1 cut(s)	694
BstV1I	GCAGC	3 cut(s)	1012, 1210, 1656
BstV2I	GAAGAC	2 cut(s)	135, 1524
BstX2I	RGATCY	5 cut(s)	340, 1244, 1342, 1699, 1891
BstXI	CCANNNNNNTGG	3 cut(s)	1089, 1386, 1513
BstYI	RGATCY	5 cut(s)	340, 1244, 1342, 1699, 1891
BsuI	GTATCC	3 cut(s)	248, 1308, 1830
BsuRI	GGCC	1 cut(s)	1818
BtgZI	GCGATG	3 cut(s)	20, 1059, 1102
BtsI	GCAGTG	1 cut(s)	1590
BtsIMutI	CAGTG	4 cut(s)	541, 613, 1474, 1590
Cac8I	GCNNGC	4 cut(s)	1148, 1625, 1870, 1874
CaiI	CAGNNNCTG	1 cut(s)	1779
CciI	TCATGA	1 cut(s)	265
CfoI	GCGC	1 cut(s)	696
Cfr10I	RCCGGY	1 cut(s)	812
Cfr13I	GGNCC	2 cut(s)	307, 1801
Cfr9I	CCCGGG	1 cut(s)	1742
CseI	GACGC	1 cut(s)	842
Csp6I	GTAC	3 cut(s)	160, 816, 971
CspAI	ACCGGT	1 cut(s)	812
CspCI	CAANNNNNGTGG	2 cut(s)	163, 198
CviQI	GTAC	3 cut(s)	160, 816, 971
DdeI	CTNAG	8 cut(s)	357, 446, 570, 661, 1322, 1683, 1864, 1882
DpnI	GATC	8 cut(s)	342, 1246, 1344, 1435, 1489, 1608, 1701, 1893
DpnII	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
DriI	GACNNNNNGTC	1 cut(s)	1885
EaeI	YGGCCR	1 cut(s)	1816
Eam1104I	CTCTTC	4 cut(s)	36, 56, 1518, 1704
Eam1105I	GACNNNNNGTC	1 cut(s)	1885
EarI	CTCTTC	4 cut(s)	36, 56, 1518, 1704
Ecl136II	GAGCTC	1 cut(s)	263
Eco105I	TACGTA	1 cut(s)	1336
Eco24I	GRGCYC	2 cut(s)	207, 265
Eco31I	GGTCTC	2 cut(s)	193, 1395
Eco47I	GGWCC	2 cut(s)	307, 1801
Eco53kI	GAGCTC	1 cut(s)	263
Eco57I	CTGAAG	3 cut(s)	397, 638, 1728
Eco88I	CYCGRG	2 cut(s)	1056, 1742
EcoICRI	GAGCTC	1 cut(s)	263
EcoO109I	RGGNCCY	2 cut(s)	307, 1801
EcoRI	GAATTC	1 cut(s)	1728
EcoRII	CCWGG	3 cut(s)	1081, 1247, 1803
EcoT22I	ATGCAT	3 cut(s)	77, 796, 1558
EcoT38I	GRGCYC	2 cut(s)	207, 265
FaqI	GGGAC	5 cut(s)	198, 320, 1107, 1422, 1807
FauI	CCCGC	1 cut(s)	1139
Fnu4HI	GCNGC	4 cut(s)	1001, 1151, 1199, 1670
FriOI	GRGCYC	2 cut(s)	207, 265
Fsp4HI	GCNGC	4 cut(s)	1001, 1151, 1199, 1670
FspBI	CTAG	6 cut(s)	200, 434, 861, 1031, 1242, 1599
GlaI	GCGC	1 cut(s)	695
GluI	GCNGC	4 cut(s)	1001, 1151, 1199, 1670
GsaI	CCCAGC	1 cut(s)	1668
HaeIII	GGCC	1 cut(s)	1818
HapII	CCGG	3 cut(s)	252, 813, 1743
HgaI	GACGC	1 cut(s)	842
HhaI	GCGC	1 cut(s)	696
Hin1I	GRCGYC	1 cut(s)	853
Hin6I	GCGC	1 cut(s)	694
HinP1I	GCGC	1 cut(s)	694
HincII	GTYRAC	2 cut(s)	229, 749
HindII	GTYRAC	2 cut(s)	229, 749
HinfI	GANTC	9 cut(s)	649, 700, 741, 1054, 1375, 1441, 1602, 1880, 1886
HpaII	CCGG	3 cut(s)	252, 813, 1743
Hpy166II	GTNNAC	6 cut(s)	229, 553, 611, 749, 1053, 1457
Hpy8I	GTNNAC	6 cut(s)	229, 553, 611, 749, 1053, 1457
HpyCH4III	ACNGT	8 cut(s)	287, 481, 536, 907, 975, 1469, 1482, 1719
HpyCH4IV	ACGT	3 cut(s)	225, 1335, 1737
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1084, 1159, 1572, 1869
HpyF3I	CTNAG	8 cut(s)	357, 446, 570, 661, 1322, 1683, 1864, 1882
HpySE526I	ACGT	3 cut(s)	225, 1335, 1737
Hsp92I	GRCGYC	1 cut(s)	853
HspAI	GCGC	1 cut(s)	694
KflI	GGGWCCC	1 cut(s)	307
Kzo9I	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
LguI	GCTCTTC	1 cut(s)	1518
LmnI	GCTCC	2 cut(s)	260, 922
Lsp1109I	GCAGC	3 cut(s)	1012, 1210, 1656
LweI	GCATC	7 cut(s)	84, 184, 725, 1024, 1133, 1180, 1289
MaeI	CTAG	6 cut(s)	200, 434, 861, 1031, 1242, 1599
MaeII	ACGT	3 cut(s)	225, 1335, 1737
MaeIII	GTNAC	3 cut(s)	481, 808, 1769
MalI	GATC	8 cut(s)	342, 1246, 1344, 1435, 1489, 1608, 1701, 1893
MboI	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
MfeI	CAATTG	1 cut(s)	1659
MflI	RGATCY	5 cut(s)	340, 1244, 1342, 1699, 1891
MhlI	GDGCHC	3 cut(s)	207, 265, 1476
MlsI	TGGCCA	1 cut(s)	1818
MluCI	AATT	7 cut(s)	639, 824, 899, 1280, 1659, 1728, 1757
MluNI	TGGCCA	1 cut(s)	1818
MlyI	GAGTC	5 cut(s)	694, 1048, 1596, 1874, 1895
MmeI	TCCRAC	5 cut(s)	872, 889, 1385, 1403, 1768
Mox20I	TGGCCA	1 cut(s)	1818
Mph1103I	ATGCAT	3 cut(s)	77, 796, 1558
MroXI	GAANNNNTTC	1 cut(s)	45
MscI	TGGCCA	1 cut(s)	1818
MseI	TTAA	2 cut(s)	408, 1842
MslI	CAYNNNNRTG	3 cut(s)	503, 1781, 1824
Msp20I	TGGCCA	1 cut(s)	1818
MspI	CCGG	3 cut(s)	252, 813, 1743
MspR9I	CCNGG	5 cut(s)	1083, 1249, 1743, 1744, 1805
MunI	CAATTG	1 cut(s)	1659
Mva1269I	GAATGC	3 cut(s)	498, 1556, 1672
MvaI	CCWGG	3 cut(s)	1083, 1249, 1805
MvnI	CGCG	1 cut(s)	694
MwoI	GCNNNNNNNGC	4 cut(s)	1084, 1159, 1572, 1869
NciI	CCSGG	2 cut(s)	1743, 1744
NdeII	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
NlaIV	GGNNCC	6 cut(s)	308, 309, 342, 924, 1701, 1802
NmuCI	GTSAC	3 cut(s)	481, 808, 1769
NsiI	ATGCAT	3 cut(s)	77, 796, 1558
NspI	RCATGY	3 cut(s)	567, 770, 1627
OliI	CACNNNNGTG	2 cut(s)	1781, 1824
PaeI	GCATGC	1 cut(s)	1627
PaeR7I	CTCGAG	1 cut(s)	1056
PagI	TCATGA	1 cut(s)	265
PciSI	GCTCTTC	1 cut(s)	1518
PctI	GAATGC	3 cut(s)	498, 1556, 1672
PdmI	GAANNNNTTC	1 cut(s)	45
PfeI	GAWTC	4 cut(s)	649, 741, 1375, 1441
PinAI	ACCGGT	1 cut(s)	812
PkrI	GCNGC	4 cut(s)	1002, 1152, 1200, 1671
PleI	GAGTC	5 cut(s)	694, 1048, 1596, 1874, 1894
PpsI	GAGTC	5 cut(s)	694, 1048, 1596, 1874, 1894
Ppu21I	YACGTR	1 cut(s)	1336
PpuMI	RGGWCCY	2 cut(s)	307, 1801
PshAI	GACNNNNGTC	1 cut(s)	1799
Psp124BI	GAGCTC	1 cut(s)	265
Psp1406I	AACGTT	1 cut(s)	1737
Psp5II	RGGWCCY	2 cut(s)	307, 1801
Psp6I	CCWGG	3 cut(s)	1081, 1247, 1803
PspFI	CCCAGC	1 cut(s)	1664
PspGI	CCWGG	3 cut(s)	1081, 1247, 1803
PspN4I	GGNNCC	6 cut(s)	308, 309, 342, 924, 1701, 1802
PspPI	GGNCC	2 cut(s)	307, 1801
PspPPI	RGGWCCY	2 cut(s)	307, 1801
PspXI	VCTCGAGB	1 cut(s)	1056
PstNI	CAGNNNCTG	1 cut(s)	1779
PsuI	RGATCY	5 cut(s)	340, 1244, 1342, 1699, 1891
RsaI	GTAC	3 cut(s)	161, 817, 972
RsaNI	GTAC	3 cut(s)	160, 816, 971
RseI	CAYNNNNRTG	3 cut(s)	503, 1781, 1824
SacI	GAGCTC	1 cut(s)	265
SapI	GCTCTTC	1 cut(s)	1518
SaqAI	TTAA	2 cut(s)	408, 1842
SatI	GCNGC	4 cut(s)	1001, 1151, 1199, 1670
Sau3AI	GATC	8 cut(s)	340, 1244, 1342, 1433, 1487, 1606, 1699, 1891
Sau96I	GGNCC	2 cut(s)	307, 1801
SchI	GAGTC	5 cut(s)	694, 1048, 1596, 1874, 1895
ScrFI	CCNGG	5 cut(s)	1083, 1249, 1743, 1744, 1805
SduI	GDGCHC	3 cut(s)	207, 265, 1476
SfaNI	GCATC	7 cut(s)	84, 184, 725, 1024, 1133, 1180, 1289
SfcI	CTRYAG	2 cut(s)	733, 1399
Sfr274I	CTCGAG	1 cut(s)	1056
SinI	GGWCC	2 cut(s)	307, 1801
SlaI	CTCGAG	1 cut(s)	1056
SmaI	CCCGGG	1 cut(s)	1744
SmiMI	CAYNNNNRTG	3 cut(s)	503, 1781, 1824
SmlI	CTYRAG	2 cut(s)	878, 1056
SmoI	CTYRAG	2 cut(s)	878, 1056
SnaBI	TACGTA	1 cut(s)	1336
SphI	GCATGC	1 cut(s)	1627
Sse9I	AATT	7 cut(s)	639, 824, 899, 1280, 1659, 1728, 1757
SsiI	CCGC	3 cut(s)	474, 1146, 1150
SspMI	CTAG	6 cut(s)	200, 434, 861, 1031, 1242, 1599
SstI	GAGCTC	1 cut(s)	265
StyD4I	CCNGG	5 cut(s)	1081, 1247, 1741, 1742, 1803
TaaI	ACNGT	8 cut(s)	287, 481, 536, 907, 975, 1469, 1482, 1719
TaiI	ACGT	3 cut(s)	228, 1338, 1740
TaqI	TCGA	4 cut(s)	240, 964, 1057, 1605
TaqII	GACCGA	1 cut(s)	266
TasI	AATT	7 cut(s)	639, 824, 899, 1280, 1659, 1728, 1757
TatI	WGTACW	1 cut(s)	970
TauI	GCSGC	1 cut(s)	1153
TfiI	GAWTC	4 cut(s)	649, 741, 1375, 1441
Tru1I	TTAA	2 cut(s)	408, 1842
Tru9I	TTAA	2 cut(s)	408, 1842
TscAI	CASTG	4 cut(s)	541, 613, 1474, 1590
TseFI	GTSAC	3 cut(s)	481, 808, 1769
TseI	GCWGC	3 cut(s)	1000, 1198, 1669
Tsp45I	GTSAC	3 cut(s)	481, 808, 1769
TspDTI	ATGAA	6 cut(s)	126, 152, 282, 681, 1095, 1208
TspGWI	ACGGA	3 cut(s)	273, 734, 1319
TspMI	CCCGGG	1 cut(s)	1742
TspRI	CASTG	4 cut(s)	541, 613, 1474, 1590
VpaK11BI	GGWCC	2 cut(s)	307, 1801
XapI	RAATTY	4 cut(s)	639, 899, 1728, 1757
XbaI	TCTAGA	2 cut(s)	199, 1030
XceI	RCATGY	3 cut(s)	567, 770, 1627
XcmI	CCANNNNNNNNNTGG	2 cut(s)	181, 1086
XhoI	CTCGAG	1 cut(s)	1056
XmaI	CCCGGG	1 cut(s)	1742
XmnI	GAANNNNTTC	1 cut(s)	45
XspI	CTAG	6 cut(s)	200, 434, 861, 1031, 1242, 1599
Zsp2I	ATGCAT	3 cut(s)	77, 796, 1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.