Prupe.1G334000_v2.0.a1

Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015839
Physical Location & Seq
Reverse (-)
31595187 .. 31598358
3172 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G334000.1

Sequence Viewer

Length: 1881 bp
ATGGCCATGGCAAATAAATACGAAGAAGAAGAAGAAGCGGAGGAAATTCAAAACTTCGCAAAGAGACTGAAATGTAGCAGATACGAGGAACATCAAGAAGAAGAAGAAGAAGAGGAGGAGGAGAGCGAGCTGGCGTTGAAGCTAGGGATGGTAGTTTACCCAATGAAACCCGCATCGTTTGTGGTCTCAGATGCTCTGGAGGCCGATGGTCCTATCATTTATGTCAACAAAGTCTTCGAGACCTTCACCGGCTATTGCGCCCACGAGGTCCTCGGTCGGAACTGTCGATTCCTACAGTATAGGGACCCTCATGCTCAAAGACGGCATCCTCTGGTAGATCCTGTTGTTGTTTCTGAGATTAGAAGGTGTCTCGAGGAAGGAGTTGAGTTCCAAGGCGAGCTTCTTAATTTCAGGAAGGATGGAACTCCCTTGGTGAATAGGCTAAGACTGAAACCTATACATGATGATAATGGAACTGTTACACACATCATAGGCATTCAAGTATTTTCCGAAGCAAAAATAGATCTGAGCAGTGTCTCATATCCAGTTTATAAAGAGACATGCAATCAGCAGTATGATCAATCTGGTAAATATTCTCTCATGAGTGGACAAACACCTTTCACCCAGTATCAAGAAATATGTGGGATTCTTCAGCTCTCCGATGAAGTCTTGGCTCACAACATCTTATCACGCTTGACTCCCAGGGATGTGGCATCCATTGGTTCTGTCTGCAGAAGAATCCGTCAACTAACAAAAAATGAGCATGTAAGAAAGATGGTATGTCAAAATGCATGGGGAAGAGAAGTCACCGGTACATTGGAATTGATGACTAATAAGTTAGGGTGGGGGCGTCTGGCCAGGGAACTGACGACTCTTGAGGCTGTTTGTTGGAGGAAATTTACAGTTGGAGGTGCCGTGGAGCCTTCACGATGCAATTTCAGTGCTTGTGCTGTAGGAAATCGACTTGTACTGTTTGGAGGGGAAGGAGTTGATATGCAGCCAATGGATGACACATTTGTTCTCAATCTTGATGCTGCTGATCCAGAGTGGCGTCGAGTAAGTGTGAAATCATCACCACCAGGGCGTTGGGGCCACACTCTTTCGTGCTTGAATGGTTCTTGGTTGGTAGTTTTTGGAGGCTGTGGGCGGGAAGGATTGCTCAATGATGTTTTCATTCTTGACTTGGATGCCAAGCAGCCAACATGGAAAGAAGTTTTTGGTGGAACTCCCCCGCTTCCTAGATCCTGGCATAGCTCTTGTACAGTTGAAGGGTCTAAATTAGTTGTGTCAGGTGGATGCACAGATGCTGGGGTACTTCTTAGTGACACATACTTATTGGATCTCACTACAGACCACCCAACATGGAAAGAGATTCCAACTTCATGGGCTCCTCCCTCTAGGTTGGGGCATTCACTTTCAGTTTATGGTCGATCAAAGATTCTCATGTTTGGTGGACTTGCCAACAGTGGGCACTTGAGGTTACGATCAGGTGAGACTTACACTATTGATTTGGAAGATGAAAACCCTCAGTGGAGGCAACTGGAGTGTAACGCGTTCACCAGCATAGGCAGCCAGAGCTCTGTGGTTCCCCCTCCTAGACTTGATCACGTTGCTGTCAGCATGCCTTGTGGAAGGATCATTATCTTCGGTGGTTCAATCGCAGGGCTGCATTCTCCTTCTCAGCTTTTCCTCTTGGATCCTTCGGAAGAGAAACCATCATGGAGAATTCTCAACGTTCCGGGGCAACCACCTAAATTTGCTTGGGGTCATAGCACTTGCGTGGTTGGCGGGACAAGGGTCCTGGTATTGGGTGGGCACACAGGTGAGGAGTGGATACTTAATGACTTACATGAGTTGTGCTTAGCAAGCCGGCAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
F-box Kelch_2 Kelch_4 PAS_9

Protein Analysis

627

Amino Acids

69.8

Weight (kDa)

5.49

Isoelectric Point (pI)

50.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015839)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68050
fragaria_vesca FvH4_4g33490
malus_domestica MD16G1018000.v1.1
prunus_persica Prupe.1G334000_v2.0.a1
pyrus_communis pycom16g01630
rosa_chinensis RchiOBHm_Chr4g0442801
rosa_laevigata RLG00000005983
rosa_multiflora Rmu_ssc0000204.1_g000019
rosa_roxburghii Rroxscaffold_5G00383580
rosa_rugosa Rorug04G0343300
rosa_samantha Rh4AG395800 Rh4BG408700 Rh4CG424300 Rh4DG402800
rosa_wichuraiana Rw4G034210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 552
AccB1I GGYRCC 1 cut(s) 911
AccII CGCG 1 cut(s) 1553
AciI CCGC 5 cut(s) 38, 171, 1147, 1232, 1788
AclI AACGTT 1 cut(s) 1734
AclWI GGATC 7 cut(s) 332, 1034, 1236, 1347, 1643, 1691, 1704
AcoI YGGCCR 2 cut(s) 3, 855
AcsI RAATTY 4 cut(s) 45, 896, 1725, 1754
AcuI CTGAAG 1 cut(s) 635
AcyI GRCGYC 2 cut(s) 850, 1051
AfaI GTAC 4 cut(s) 814, 969, 1261, 1314
AfiI CCNNNNNNNGG 2 cut(s) 1467, 1807
AflIII ACRYGT 1 cut(s) 1551
AgeI ACCGGT 1 cut(s) 809
AgsI TTSAA 6 cut(s) 50, 139, 500, 1111, 1268, 1656
AjnI CCWGG 5 cut(s) 701, 857, 1078, 1244, 1800
AjuI GAANNNNNNNTTGG 2 cut(s) 384, 416
AleI CACNNNNGTG 2 cut(s) 1778, 1821
AluBI AGCT 7 cut(s) 130, 142, 400, 655, 1254, 1578, 1684
AluI AGCT 7 cut(s) 130, 142, 400, 655, 1254, 1578, 1684
Alw21I GWGCWC 1 cut(s) 1580
Alw26I GTCTC 7 cut(s) 58, 190, 233, 374, 541, 551, 1487
AlwI GGATC 7 cut(s) 332, 1034, 1236, 1347, 1643, 1691, 1704
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 4 cut(s) 3, 201, 855, 1090
ApeKI GCWGC 5 cut(s) 997, 1034, 1195, 1569, 1666
ApoI RAATTY 4 cut(s) 45, 896, 1725, 1754
AsiGI ACCGGT 1 cut(s) 809
AspLEI GCGC 1 cut(s) 260
AspS9I GGNCC 5 cut(s) 209, 268, 304, 1090, 1798
AsuC2I CCSGG 1 cut(s) 1740
AsuHPI GGTGA 8 cut(s) 238, 445, 613, 799, 1065, 1502, 1549, 1835
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 4 cut(s) 209, 268, 304, 1798
BaeGI GKGCMC 2 cut(s) 1473, 1818
BalI TGGCCA 2 cut(s) 5, 857
BamHI GGATCC 1 cut(s) 1696
BanI GGYRCC 1 cut(s) 911
BanII GRGCYC 2 cut(s) 1390, 1580
BauI CACGAG 1 cut(s) 263
BbsI GAAGAC 1 cut(s) 226
Bbv12I GWGCWC 1 cut(s) 1580
BbvI GCAGC 5 cut(s) 1009, 1021, 1207, 1581, 1653
BccI CCATC 5 cut(s) 142, 200, 413, 769, 1723
BceAI ACGGC 2 cut(s) 338, 899
BciT130I CCWGG 5 cut(s) 703, 859, 1080, 1246, 1802
BciVI GTATCC 1 cut(s) 1827
BclI TGATCA 2 cut(s) 577, 1603
BcnI CCSGG 1 cut(s) 1740
BcoDI GTCTC 7 cut(s) 58, 190, 233, 374, 541, 551, 1487
BfaI CTAG 4 cut(s) 143, 1239, 1398, 1596
BfmI CTRYAG 4 cut(s) 293, 730, 951, 1347
BfuI GTATCC 1 cut(s) 1827
BglII AGATCT 1 cut(s) 523
BisI GCNGC 5 cut(s) 998, 1035, 1196, 1570, 1667
BlpI GCTNAGC 1 cut(s) 1861
BlsI GCNGC 5 cut(s) 999, 1036, 1197, 1571, 1668
Bme1390I CCNGG 6 cut(s) 703, 859, 1080, 1246, 1740, 1802
Bme18I GGWCC 4 cut(s) 209, 268, 304, 1798
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 5 cut(s) 209, 268, 304, 1090, 1798
BmiI GGNNCC 9 cut(s) 305, 306, 913, 921, 1091, 1389, 1587, 1698, 1799
BmrFI CCNGG 6 cut(s) 703, 859, 1080, 1246, 1740, 1802
BmrI ACTGGG 1 cut(s) 619
BmsI GCATC 9 cut(s) 181, 182, 334, 722, 920, 1021, 1177, 1286, 1294
BmuI ACTGGG 1 cut(s) 619
BoxI GACNNNNGTC 1 cut(s) 1796
BpiI GAAGAC 1 cut(s) 226
BpmI CTGGAG 2 cut(s) 218, 1562
Bpu1102I GCTNAGC 1 cut(s) 1861
BpuEI CTTGAG 2 cut(s) 896, 1495
BpuMI CCSGG 1 cut(s) 1740
BsaBI GATNNNNATC 1 cut(s) 1640
BsaHI GRCGYC 2 cut(s) 850, 1051
BsaI GGTCTC 2 cut(s) 190, 233
BsaWI WCCGGW 1 cut(s) 809
BsaXI ACNNNNNCTCC 2 cut(s) 900, 930
Bsc4I CCNNNNNNNGG 2 cut(s) 1467, 1807
Bse118I RCCGGY 3 cut(s) 248, 809, 1869
Bse1I ACTGG 3 cut(s) 545, 625, 1545
Bse8I GATNNNNATC 1 cut(s) 1640
BseBI CCWGG 5 cut(s) 703, 859, 1080, 1246, 1802
BseGI GGATG 8 cut(s) 153, 325, 424, 712, 713, 1012, 1192, 1301
BseJI GATNNNNATC 1 cut(s) 1640
BseLI CCNNNNNNNGG 2 cut(s) 1467, 1807
BseMII CTCAG 5 cut(s) 201, 345, 518, 1541, 1694
BseNI ACTGG 3 cut(s) 545, 625, 1545
BseRI GAGGAG 5 cut(s) 128, 131, 134, 1380, 1841
BseSI GKGCMC 2 cut(s) 1473, 1818
BseXI GCAGC 5 cut(s) 1009, 1021, 1207, 1581, 1653
BseYI CCCAGC 1 cut(s) 1307
Bsh1236I CGCG 1 cut(s) 1553
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 4 cut(s) 5, 203, 857, 1092
BshNI GGYRCC 1 cut(s) 911
BshTI ACCGGT 1 cut(s) 809
BsiEI CGRYCG 1 cut(s) 277
BsiHKAI GWGCWC 1 cut(s) 1580
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 4 cut(s) 249, 810, 1739, 1870
BslFI GGGAC 2 cut(s) 317, 1804
BslI CCNNNNNNNGG 2 cut(s) 1467, 1807
BsmAI GTCTC 7 cut(s) 58, 190, 233, 374, 541, 551, 1487
BsmFI GGGAC 2 cut(s) 317, 1804
BsmI GAATGC 3 cut(s) 495, 1408, 1669
BsnI GGCC 4 cut(s) 5, 203, 857, 1092
Bso31I GGTCTC 2 cut(s) 190, 233
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 4 cut(s) 1390, 1473, 1580, 1818
Bsp1407I TGTACA 1 cut(s) 1259
Bsp1720I GCTNAGC 1 cut(s) 1861
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 5 cut(s) 38, 171, 1147, 1232, 1788
BspANI GGCC 4 cut(s) 5, 203, 857, 1092
BspCNI CTCAG 5 cut(s) 200, 346, 519, 1540, 1693
BspFNI CGCG 1 cut(s) 1553
BspHI TCATGA 1 cut(s) 600
BspLI GGNNCC 9 cut(s) 305, 306, 913, 921, 1091, 1389, 1587, 1698, 1799
BspMAI CTGCAG 1 cut(s) 734
BspPI GGATC 7 cut(s) 332, 1034, 1236, 1347, 1643, 1691, 1704
BspT107I GGYRCC 1 cut(s) 911
BspTNI GGTCTC 2 cut(s) 190, 233
BsrFI RCCGGY 3 cut(s) 248, 809, 1869
BsrGI TGTACA 1 cut(s) 1259
BsrI ACTGG 3 cut(s) 545, 625, 1545
BssAI RCCGGY 3 cut(s) 248, 809, 1869
BssNI GRCGYC 2 cut(s) 850, 1051
BssSI CACGAG 1 cut(s) 263
BssT1I CCWWGG 3 cut(s) 6, 391, 429
Bst2BI CACGAG 1 cut(s) 263
Bst2UI CCWGG 5 cut(s) 703, 859, 1080, 1246, 1802
Bst4CI ACNGT 7 cut(s) 284, 297, 478, 904, 972, 1264, 1466
Bst6I CTCTTC 3 cut(s) 105, 793, 1701
BstACI GRCGYC 2 cut(s) 850, 1051
BstAUI TGTACA 1 cut(s) 1259
BstC8I GCNNGC 6 cut(s) 128, 132, 398, 1622, 1867, 1871
BstDEI CTNAG 8 cut(s) 187, 354, 443, 527, 1319, 1527, 1680, 1861
BstDSI CCRYGG 2 cut(s) 6, 915
BstF5I GGATG 8 cut(s) 153, 325, 424, 712, 713, 1012, 1192, 1301
BstFNI CGCG 1 cut(s) 1553
BstHHI GCGC 1 cut(s) 260
BstMAI GTCTC 7 cut(s) 58, 190, 233, 374, 541, 551, 1487
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 5 cut(s) 200, 1569, 1575, 1785, 1866
BstNI CCWGG 5 cut(s) 703, 859, 1080, 1246, 1802
BstNSI RCATGY 3 cut(s) 564, 767, 1624
BstPAI GACNNNNGTC 1 cut(s) 1796
BstSCI CCNGG 6 cut(s) 701, 857, 1078, 1244, 1738, 1800
BstSFI CTRYAG 4 cut(s) 293, 730, 951, 1347
BstSLI GKGCMC 2 cut(s) 1473, 1818
BstUI CGCG 1 cut(s) 1553
BstV1I GCAGC 5 cut(s) 1009, 1021, 1207, 1581, 1653
BstV2I GAAGAC 1 cut(s) 226
BstX2I RGATCY 5 cut(s) 337, 523, 1241, 1339, 1696
BstXI CCANNNNNNTGG 3 cut(s) 709, 1086, 1383
BstYI RGATCY 5 cut(s) 337, 523, 1241, 1339, 1696
BsuI GTATCC 1 cut(s) 1827
BsuRI GGCC 4 cut(s) 5, 203, 857, 1092
BtgI CCRYGG 2 cut(s) 6, 915
BtsCI GGATG 8 cut(s) 153, 325, 424, 712, 713, 1012, 1192, 1301
BtsI GCAGTG 1 cut(s) 538
BtsIMutI CAGTG 4 cut(s) 538, 946, 1471, 1535
Cac8I GCNNGC 6 cut(s) 128, 132, 398, 1622, 1867, 1871
CaiI CAGNNNCTG 1 cut(s) 1307
CciI TCATGA 1 cut(s) 600
CfoI GCGC 1 cut(s) 260
Cfr10I RCCGGY 3 cut(s) 248, 809, 1869
Cfr13I GGNCC 5 cut(s) 209, 268, 304, 1090, 1798
CseI GACGC 2 cut(s) 839, 1040
Csp6I GTAC 4 cut(s) 813, 968, 1260, 1313
CspAI ACCGGT 1 cut(s) 809
CviQI GTAC 4 cut(s) 813, 968, 1260, 1313
DdeI CTNAG 8 cut(s) 187, 354, 443, 527, 1319, 1527, 1680, 1861
EaeI YGGCCR 2 cut(s) 3, 855
Eam1104I CTCTTC 3 cut(s) 105, 793, 1701
EarI CTCTTC 3 cut(s) 105, 793, 1701
Ecl136II GAGCTC 1 cut(s) 1578
Eco130I CCWWGG 3 cut(s) 6, 391, 429
Eco24I GRGCYC 2 cut(s) 1390, 1580
Eco31I GGTCTC 2 cut(s) 190, 233
Eco47I GGWCC 4 cut(s) 209, 268, 304, 1798
Eco53kI GAGCTC 1 cut(s) 1578
Eco57I CTGAAG 1 cut(s) 635
Eco88I CYCGRG 1 cut(s) 371
EcoICRI GAGCTC 1 cut(s) 1578
EcoO109I RGGNCCY 3 cut(s) 268, 304, 1798
EcoRI GAATTC 1 cut(s) 1725
EcoRII CCWGG 5 cut(s) 701, 857, 1078, 1244, 1800
EcoT14I CCWWGG 3 cut(s) 6, 391, 429
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 2 cut(s) 1390, 1580
ErhI CCWWGG 3 cut(s) 6, 391, 429
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FaqI GGGAC 2 cut(s) 317, 1804
FauI CCCGC 4 cut(s) 178, 1140, 1239, 1781
FbaI TGATCA 2 cut(s) 577, 1603
Fnu4HI GCNGC 5 cut(s) 998, 1035, 1196, 1570, 1667
FokI GGATG 8 cut(s) 160, 312, 431, 700, 719, 1019, 1199, 1308
FriOI GRGCYC 2 cut(s) 1390, 1580
Fsp4HI GCNGC 5 cut(s) 998, 1035, 1196, 1570, 1667
FspBI CTAG 4 cut(s) 143, 1239, 1398, 1596
GlaI GCGC 1 cut(s) 259
GluI GCNGC 5 cut(s) 998, 1035, 1196, 1570, 1667
GsaI CCCAGC 1 cut(s) 1311
GsuI CTGGAG 2 cut(s) 218, 1562
HaeIII GGCC 4 cut(s) 5, 203, 857, 1092
HapII CCGG 4 cut(s) 249, 810, 1739, 1870
HgaI GACGC 2 cut(s) 839, 1040
HhaI GCGC 1 cut(s) 260
Hin1I GRCGYC 2 cut(s) 850, 1051
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
HincII GTYRAC 2 cut(s) 226, 746
HindII GTYRAC 2 cut(s) 226, 746
HinfI GANTC 7 cut(s) 288, 646, 697, 738, 871, 1372, 1438
HpaII CCGG 4 cut(s) 249, 810, 1739, 1870
HphI GGTGA 8 cut(s) 238, 445, 613, 799, 1065, 1502, 1549, 1835
Hpy166II GTNNAC 6 cut(s) 157, 226, 608, 746, 1454, 1557
Hpy188I TCNGA 7 cut(s) 190, 279, 355, 511, 528, 661, 1705
Hpy8I GTNNAC 6 cut(s) 157, 226, 608, 746, 1454, 1557
Hpy99I CGWCG 1 cut(s) 1056
HpyCH4III ACNGT 7 cut(s) 284, 297, 478, 904, 972, 1264, 1466
HpyCH4IV ACGT 2 cut(s) 1608, 1734
HpyCH4V TGCA 7 cut(s) 564, 732, 791, 933, 997, 1299, 1669
HpyF10VI GCNNNNNNNGC 5 cut(s) 200, 1569, 1575, 1785, 1866
HpyF3I CTNAG 8 cut(s) 187, 354, 443, 527, 1319, 1527, 1680, 1861
HpySE526I ACGT 2 cut(s) 1608, 1734
Hsp92I GRCGYC 2 cut(s) 850, 1051
HspAI GCGC 1 cut(s) 258
KflI GGGWCCC 1 cut(s) 304
KroI GCCGGC 1 cut(s) 1869
KroNI GCCGGC 1 cut(s) 1871
Ksp22I TGATCA 2 cut(s) 577, 1603
LmnI GCTCC 2 cut(s) 919, 1393
Lsp1109I GCAGC 5 cut(s) 1009, 1021, 1207, 1581, 1653
LweI GCATC 9 cut(s) 181, 182, 334, 722, 920, 1021, 1177, 1286, 1294
MaeI CTAG 4 cut(s) 143, 1239, 1398, 1596
MaeII ACGT 2 cut(s) 1608, 1734
MaeIII GTNAC 5 cut(s) 478, 805, 1322, 1479, 1547
MflI RGATCY 5 cut(s) 337, 523, 1241, 1339, 1696
MhlI GDGCHC 4 cut(s) 1390, 1473, 1580, 1818
MlsI TGGCCA 2 cut(s) 5, 857
MluCI AATT 8 cut(s) 45, 406, 821, 896, 934, 1277, 1725, 1754
MluI ACGCGT 1 cut(s) 1551
MluNI TGGCCA 2 cut(s) 5, 857
MlyI GAGTC 2 cut(s) 691, 865
MmeI TCCRAC 4 cut(s) 257, 869, 886, 1400
Mox20I TGGCCA 2 cut(s) 5, 857
Mph1103I ATGCAT 1 cut(s) 793
MroNI GCCGGC 1 cut(s) 1869
MscI TGGCCA 2 cut(s) 5, 857
MseI TTAA 2 cut(s) 405, 1839
MslI CAYNNNNRTG 2 cut(s) 1778, 1821
Msp20I TGGCCA 2 cut(s) 5, 857
MspI CCGG 4 cut(s) 249, 810, 1739, 1870
MspR9I CCNGG 6 cut(s) 703, 859, 1080, 1246, 1740, 1802
Mva1269I GAATGC 3 cut(s) 495, 1408, 1669
MvaI CCWGG 5 cut(s) 703, 859, 1080, 1246, 1802
MvnI CGCG 1 cut(s) 1553
MwoI GCNNNNNNNGC 5 cut(s) 200, 1569, 1575, 1785, 1866
NaeI GCCGGC 1 cut(s) 1871
NciI CCSGG 1 cut(s) 1740
NcoI CCATGG 1 cut(s) 6
NgoMIV GCCGGC 1 cut(s) 1869
NlaIV GGNNCC 9 cut(s) 305, 306, 913, 921, 1091, 1389, 1587, 1698, 1799
NmuCI GTSAC 2 cut(s) 805, 1322
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 3 cut(s) 564, 767, 1624
OliI CACNNNNGTG 2 cut(s) 1778, 1821
PaeI GCATGC 1 cut(s) 1624
PaeR7I CTCGAG 1 cut(s) 371
PagI TCATGA 1 cut(s) 600
PasI CCCWGGG 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 283
PctI GAATGC 3 cut(s) 495, 1408, 1669
PdiI GCCGGC 1 cut(s) 1871
PfeI GAWTC 5 cut(s) 288, 646, 738, 1372, 1438
PinAI ACCGGT 1 cut(s) 809
PkrI GCNGC 5 cut(s) 999, 1036, 1197, 1571, 1668
PleI GAGTC 2 cut(s) 691, 865
PpsI GAGTC 2 cut(s) 691, 865
PpuMI RGGWCCY 3 cut(s) 268, 304, 1798
PshAI GACNNNNGTC 1 cut(s) 1796
PsiI TTATAA 1 cut(s) 552
Psp124BI GAGCTC 1 cut(s) 1580
Psp1406I AACGTT 1 cut(s) 1734
Psp5II RGGWCCY 3 cut(s) 268, 304, 1798
Psp6I CCWGG 5 cut(s) 701, 857, 1078, 1244, 1800
PspFI CCCAGC 1 cut(s) 1307
PspGI CCWGG 5 cut(s) 701, 857, 1078, 1244, 1800
PspN4I GGNNCC 9 cut(s) 305, 306, 913, 921, 1091, 1389, 1587, 1698, 1799
PspPI GGNCC 5 cut(s) 209, 268, 304, 1090, 1798
PspPPI RGGWCCY 3 cut(s) 268, 304, 1798
PstI CTGCAG 1 cut(s) 734
PstNI CAGNNNCTG 1 cut(s) 1307
PsuI RGATCY 5 cut(s) 337, 523, 1241, 1339, 1696
RsaI GTAC 4 cut(s) 814, 969, 1261, 1314
RsaNI GTAC 4 cut(s) 813, 968, 1260, 1313
RseI CAYNNNNRTG 2 cut(s) 1778, 1821
SacI GAGCTC 1 cut(s) 1580
SaqAI TTAA 2 cut(s) 405, 1839
SatI GCNGC 5 cut(s) 998, 1035, 1196, 1570, 1667
Sau96I GGNCC 5 cut(s) 209, 268, 304, 1090, 1798
SchI GAGTC 2 cut(s) 691, 865
ScrFI CCNGG 6 cut(s) 703, 859, 1080, 1246, 1740, 1802
SduI GDGCHC 4 cut(s) 1390, 1473, 1580, 1818
SfaNI GCATC 9 cut(s) 181, 182, 334, 722, 920, 1021, 1177, 1286, 1294
SfcI CTRYAG 4 cut(s) 293, 730, 951, 1347
Sfr274I CTCGAG 1 cut(s) 371
SinI GGWCC 4 cut(s) 209, 268, 304, 1798
SlaI CTCGAG 1 cut(s) 371
SmiMI CAYNNNNRTG 2 cut(s) 1778, 1821
SmlI CTYRAG 3 cut(s) 371, 875, 1474
SmoI CTYRAG 3 cut(s) 371, 875, 1474
SphI GCATGC 1 cut(s) 1624
Sse9I AATT 8 cut(s) 45, 406, 821, 896, 934, 1277, 1725, 1754
SsiI CCGC 5 cut(s) 38, 171, 1147, 1232, 1788
SspI AATATT 1 cut(s) 593
SspMI CTAG 4 cut(s) 143, 1239, 1398, 1596
SstI GAGCTC 1 cut(s) 1580
StyD4I CCNGG 6 cut(s) 701, 857, 1078, 1244, 1738, 1800
StyI CCWWGG 3 cut(s) 6, 391, 429
TaaI ACNGT 7 cut(s) 284, 297, 478, 904, 972, 1264, 1466
TaiI ACGT 2 cut(s) 1611, 1737
TaqI TCGA 6 cut(s) 237, 286, 372, 961, 1054, 1429
TaqII GACCGA 1 cut(s) 263
TasI AATT 8 cut(s) 45, 406, 821, 896, 934, 1277, 1725, 1754
TatI WGTACW 2 cut(s) 967, 1259
TfiI GAWTC 5 cut(s) 288, 646, 738, 1372, 1438
Tru1I TTAA 2 cut(s) 405, 1839
Tru9I TTAA 2 cut(s) 405, 1839
TscAI CASTG 4 cut(s) 538, 946, 1471, 1535
TseFI GTSAC 2 cut(s) 805, 1322
TseI GCWGC 5 cut(s) 997, 1034, 1195, 1569, 1666
Tsp45I GTSAC 2 cut(s) 805, 1322
TspDTI ATGAA 5 cut(s) 179, 678, 1162, 1371, 1533
TspGWI ACGGA 1 cut(s) 731
TspRI CASTG 4 cut(s) 538, 946, 1471, 1535
VpaK11BI GGWCC 4 cut(s) 209, 268, 304, 1798
XapI RAATTY 4 cut(s) 45, 896, 1725, 1754
XceI RCATGY 3 cut(s) 564, 767, 1624
XcmI CCANNNNNNNNNTGG 1 cut(s) 1083
XhoI CTCGAG 1 cut(s) 371
XspI CTAG 4 cut(s) 143, 1239, 1398, 1596
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.