Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0015839

Physical Location & Seq

Genomic Coordinates Reverse (-)

3293827 .. 3296576

Gene Structure 2750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005983

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGCCATGGCGAAGAAGCACGAAGGAGAAGAGGAGGAGGAGGAGGTTCAGAACTTCGGGAAGAGACTGAAATGCAGCAAATACGAGGGGGTTCGAGGCGAATATGAAGAAGAAGAAGAAGAGAGCGAGGTTTCAGAGAAGCCAGAGATGCTTAGCATGTACCCAATGACTCCCACATCGTTTGTGGTCTCCGATGCTCTGGAACCCGATTGTCCGATCATTTACGTCAACAAAGTGTTCGAGACGTTCACCGGATATGGAGCTCATGAAGTCCTCGGTCGGAACTGTCGGTTCTTACAATATAGGGACCCTCATGCTCAAAGACGACATCCTCTGGTAGATCCTGATGTCGTTTCTGAGATTAGAAGGTGTCTTGAAGAAGGAGTTGAATTCTTAGGTGAGCTTCTTAATTTCAGTAAGGATGGCACTCCCTTGGTGAATAGGCTAAGGCTGAAGCCTATACTTGATGATAACGGAACTGTCACACATATCATAGGCATTCAAGTATTTGCTGAAACAAAAATAGATCTCAACAGTGTGTCATATCCAGTTTACAAAGAGACATGCACTGAGCAGTACACTCAGCCCGGTAAATATTCTCTCACTAGTGCACAAACACCTTCCACCCAACATCAAGAAATTTGTGGGATTCTGCAGCTCTCGGATGAAGTCTTGGCTCACAACATCTTATCGCGCTTGACTCCGAGGGATGTGGCATCCATTGGGTCTGTCTGCAGAAGAATCCGTCAGCTAACAAAAAATGAGCATGTGAGGAAGATGGTATGTCAAAATGCATGGGGAAGAGAAGTCACTGGTACATTGGAACTGATGACTAAGAAGTTAAGGTGGGGGCGTCTGGCTAGGGAACTGACGACTCTTGAGGCTGTTTGTTGGAGGAAATTTACTGTTGGAGGTTCTGTGGAGCCTTCGCGGTGCAATTTCAGTGCTTGTGCTATGGGAAATCGACTGGTACTGTTTGGAGGTGAAGGAGTGGATATGCAGCCAATGGATGACACATTTGTTCTCAATCTTGATGCTGCCAATCCAGAGTGGACTAGAGTAAGTGTGAAATCATCACCACCAGGTCGGTGGGGCCATACACTTTCATGTTTGAATGGTTCTTTGCTAGTAGTTTTTGGGGGATGTGGGCGGCAAGGGTTGCTCAATGATGTTTGGATTCTTGACTTGGATGCCAAGCAGCCAACATGGAAAGAAGTTTATGGCGGAACTCCTCCTCTCCCTAGATCCTGGCATAGCTCTTGCATAATAGAAGGTTCTAAATTAGTTGTGTCAGGTGGATGCACGGATGCCGGGGTACTTCTTAGCGACACATACGTATTGGATCTCACCGCTGACAATCCAACATGGAGAGAGATTCCAACTTCATGGTCTCCTCCCTCTAGGTTGGGACATTCCCTTTCAGTTTATGGCCGGTCAAAGATTCTCATGTTTGGTGGACTTGCGAACAGTGGGCACTTGCGGTTAAGATCGGGCGAGACTTACACCATTGATTTGGAAGACGAAGAGCCTCAATGGAGGCAACTGGAGTGTAATGCATTTACCAGCATTGACAGCCAGAGTGCAGTGCTGCCTCCTCCTAGACTTGATCATGTTGCTGTGAGCATGCCTTGTGGAAGGATTATCATTTTTGGTGGTTCAATTGCCGGGCTGCATTCTCCTTCTCAGCTTTTCCTCTTGGATCCTTCTGAAGAGAAACCATCATGGAGAATTTTGAACGTTCCTGGGCAACCACCTAAATTTGCTTGGGGTCACAGCACCTGCGTGGTCGGAGGGACAAGGGTCCTGGTACTGGGTGGCCACACAGGTGAGGAGTGGATACTTAATGACTTGCATGAGTTGTGCTTAGCAAGCAGGCAGGATTCAGACCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048511 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

F-box Kelch_2 Kelch_4 PAS_9

Protein Analysis

631

Amino Acids

70.14

Weight (kDa)

5.45

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAS_9	PF13426	67 - 168	7.5e-16	PAS domain
PAS_3	PF08447	73 - 167	8.5e-07	PAS fold
PAS	PF00989	73 - 167	1.5e-06	PAS fold
Kelch_KLHDC2_KLHL20_DRC7	PF24681	292 - 486	1.1e-39	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	297 - 451	5e-26	FBX42, beta-propeller domain
Beta-prop_TYW4	PF13418	310 - 553	3.8e-12	tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	325 - 516	1.2e-17	Attractin/LZTR1 beta-propeller
Kelch_HCF	PF13854	349 - 607	1.5e-17	Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	403 - 518	1.2e-16	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	456 - 624	1.3e-16	FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	470 - 625	3.9e-17	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_2	PF07646	535 - 582	1.7e-07	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68050
fragaria_vesca	FvH4_4g33490
malus_domestica	MD16G1018000.v1.1
prunus_persica	Prupe.1G334000_v2.0.a1
pyrus_communis	pycom16g01630
rosa_chinensis	RchiOBHm_Chr4g0442801
rosa_laevigata	RLG00000005983
rosa_multiflora	Rmu_ssc0000204.1_g000019
rosa_roxburghii	Rroxscaffold_5G00383580
rosa_rugosa	Rorug04G0343300
rosa_samantha	Rh4AG395800 Rh4BG408700 Rh4CG424300 Rh4DG402800
rosa_wichuraiana	Rw4G034210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1787
Acc36I	ACCTGC	1 cut(s)	1787
AccII	CGCG	2 cut(s)	694, 931
AciI	CCGC	5 cut(s)	931, 1150, 1224, 1350, 1480
AclI	AACGTT	1 cut(s)	1737
AclWI	GGATC	5 cut(s)	335, 1239, 1350, 1694, 1707
AcoI	YGGCCR	3 cut(s)	3, 1429, 1816
AcsI	RAATTY	5 cut(s)	389, 639, 899, 1728, 1757
AcuI	CTGAAG	2 cut(s)	473, 1728
AcyI	GRCGYC	1 cut(s)	853
AfaI	GTAC	6 cut(s)	161, 578, 817, 972, 1317, 1809
AfiI	CCNNNNNNNGG	1 cut(s)	1810
AgsI	TTSAA	6 cut(s)	377, 389, 503, 1114, 1659, 1735
AhlI	ACTAGT	1 cut(s)	605
AjnI	CCWGG	4 cut(s)	1081, 1247, 1741, 1803
AleI	CACNNNNGTG	2 cut(s)	1781, 1824
AluBI	AGCT	6 cut(s)	263, 403, 658, 751, 1257, 1687
AluI	AGCT	6 cut(s)	263, 403, 658, 751, 1257, 1687
Alw21I	GWGCWC	2 cut(s)	265, 613
Alw26I	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
Alw44I	GTGCAC	1 cut(s)	609
AlwI	GGATC	5 cut(s)	335, 1239, 1350, 1694, 1707
AlwNI	CAGNNNCTG	1 cut(s)	1779
AoxI	GGCC	4 cut(s)	3, 1093, 1429, 1816
ApaLI	GTGCAC	1 cut(s)	609
ApeKI	GCWGC	7 cut(s)	75, 655, 1000, 1037, 1198, 1588, 1669
ApoI	RAATTY	5 cut(s)	389, 639, 899, 1728, 1757
AspLEI	GCGC	1 cut(s)	696
AspS9I	GGNCC	3 cut(s)	307, 1093, 1801
AsuC2I	CCSGG	3 cut(s)	588, 1312, 1666
AsuHPI	GGTGA	7 cut(s)	241, 410, 448, 995, 1068, 1339, 1838
AvaII	GGWCC	2 cut(s)	307, 1801
BaeGI	GKGCMC	2 cut(s)	613, 1476
BalI	TGGCCA	2 cut(s)	5, 1818
BamHI	GGATCC	1 cut(s)	1699
BanII	GRGCYC	1 cut(s)	265
BbsI	GAAGAC	1 cut(s)	1524
Bbv12I	GWGCWC	2 cut(s)	265, 613
BbvI	GCAGC	7 cut(s)	87, 667, 1012, 1024, 1210, 1575, 1656
BccI	CCATC	3 cut(s)	416, 772, 1726
BciT130I	CCWGG	4 cut(s)	1083, 1249, 1743, 1805
BciVI	GTATCC	1 cut(s)	1830
BclI	TGATCA	1 cut(s)	1606
BcnI	CCSGG	3 cut(s)	588, 1312, 1666
BcoDI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BcuI	ACTAGT	1 cut(s)	605
BfaI	CTAG	7 cut(s)	606, 861, 1056, 1127, 1242, 1401, 1599
BfmI	CTRYAG	2 cut(s)	653, 733
BfuAI	ACCTGC	1 cut(s)	1787
BfuI	GTATCC	1 cut(s)	1830
BglII	AGATCT	1 cut(s)	526
BisI	GCNGC	8 cut(s)	76, 656, 1001, 1038, 1151, 1199, 1589, 1670
BlpI	GCTNAGC	2 cut(s)	152, 1864
BlsI	GCNGC	8 cut(s)	77, 657, 1002, 1039, 1152, 1200, 1590, 1671
Bme1390I	CCNGG	7 cut(s)	588, 1083, 1249, 1312, 1666, 1743, 1805
Bme18I	GGWCC	2 cut(s)	307, 1801
BmgT120I	GGNCC	3 cut(s)	307, 1093, 1801
BmiI	GGNNCC	7 cut(s)	204, 308, 309, 924, 1094, 1701, 1802
BmrFI	CCNGG	7 cut(s)	588, 1083, 1249, 1312, 1666, 1743, 1805
BmrI	ACTGGG	1 cut(s)	1820
BmsI	GCATC	7 cut(s)	138, 184, 725, 1024, 1180, 1289, 1297
BmuI	ACTGGG	1 cut(s)	1820
BoxI	GACNNNNGTC	1 cut(s)	1799
BpiI	GAAGAC	1 cut(s)	1524
BpmI	CTGGAG	1 cut(s)	1565
Bpu10I	CCTNAGC	1 cut(s)	446
Bpu1102I	GCTNAGC	2 cut(s)	152, 1864
BpuEI	CTTGAG	1 cut(s)	899
BpuMI	CCSGG	3 cut(s)	588, 1312, 1666
BsaAI	YACGTR	1 cut(s)	1336
BsaHI	GRCGYC	1 cut(s)	853
BsaI	GGTCTC	2 cut(s)	193, 1395
BsaJI	CCNNGG	6 cut(s)	6, 274, 432, 704, 1311, 1742
BsaWI	WCCGGW	1 cut(s)	251
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	1 cut(s)	1810
Bse118I	RCCGGY	1 cut(s)	1431
Bse1I	ACTGG	5 cut(s)	548, 817, 972, 1548, 1815
BseBI	CCWGG	4 cut(s)	1083, 1249, 1743, 1805
BseDI	CCNNGG	6 cut(s)	6, 274, 432, 704, 1311, 1742
BseLI	CCNNNNNNNGG	1 cut(s)	1810
BseMII	CTCAG	4 cut(s)	348, 561, 596, 1697
BseNI	ACTGG	5 cut(s)	548, 817, 972, 1548, 1815
BseRI	GAGGAG	9 cut(s)	47, 50, 53, 56, 1221, 1224, 1383, 1584, 1844
BseSI	GKGCMC	2 cut(s)	613, 1476
BseXI	GCAGC	7 cut(s)	87, 667, 1012, 1024, 1210, 1575, 1656
BsgI	GTGCAG	1 cut(s)	1602
Bsh1236I	CGCG	2 cut(s)	694, 931
Bsh1285I	CGRYCG	1 cut(s)	280
BshFI	GGCC	4 cut(s)	5, 1095, 1431, 1818
BsiEI	CGRYCG	1 cut(s)	280
BsiHKAI	GWGCWC	2 cut(s)	265, 613
BsiSI	CCGG	5 cut(s)	252, 588, 1311, 1432, 1665
BslFI	GGGAC	3 cut(s)	320, 1422, 1807
BslI	CCNNNNNNNGG	1 cut(s)	1810
BsmAI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	3 cut(s)	320, 1422, 1807
BsmI	GAATGC	2 cut(s)	498, 1672
BsnI	GGCC	4 cut(s)	5, 1095, 1431, 1818
Bso31I	GGTCTC	2 cut(s)	193, 1395
Bsp1286I	GDGCHC	3 cut(s)	265, 613, 1476
Bsp143I	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
Bsp1720I	GCTNAGC	2 cut(s)	152, 1864
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	5 cut(s)	931, 1150, 1224, 1350, 1480
BspANI	GGCC	4 cut(s)	5, 1095, 1431, 1818
BspCNI	CTCAG	4 cut(s)	349, 562, 595, 1696
BspFNI	CGCG	2 cut(s)	694, 931
BspHI	TCATGA	1 cut(s)	265
BspLI	GGNNCC	7 cut(s)	204, 308, 309, 924, 1094, 1701, 1802
BspMAI	CTGCAG	2 cut(s)	657, 737
BspMI	ACCTGC	1 cut(s)	1787
BspPI	GGATC	5 cut(s)	335, 1239, 1350, 1694, 1707
BspQI	GCTCTTC	1 cut(s)	1518
BspTNI	GGTCTC	2 cut(s)	193, 1395
BsrFI	RCCGGY	1 cut(s)	1431
BsrI	ACTGG	5 cut(s)	548, 817, 972, 1548, 1815
BssAI	RCCGGY	1 cut(s)	1431
BssECI	CCNNGG	6 cut(s)	6, 274, 432, 704, 1311, 1742
BssMI	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
BssNI	GRCGYC	1 cut(s)	853
BssT1I	CCWWGG	2 cut(s)	6, 432
Bst2UI	CCWGG	4 cut(s)	1083, 1249, 1743, 1805
Bst4CI	ACNGT	6 cut(s)	287, 481, 536, 907, 975, 1469
Bst6I	CTCTTC	6 cut(s)	24, 56, 114, 796, 1518, 1704
BstACI	GRCGYC	1 cut(s)	853
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstBAI	YACGTR	1 cut(s)	1336
BstC8I	GCNNGC	3 cut(s)	1625, 1870, 1874
BstDSI	CCRYGG	1 cut(s)	6
BstFNI	CGCG	2 cut(s)	694, 931
BstHHI	GCGC	1 cut(s)	696
BstKTI	GATC	8 cut(s)	219, 343, 529, 1247, 1345, 1490, 1609, 1702
BstMAI	GTCTC	6 cut(s)	58, 193, 236, 554, 1395, 1490
BstMBI	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
BstMCI	CGRYCG	1 cut(s)	280
BstMWI	GCNNNNNNNGC	4 cut(s)	148, 1159, 1572, 1869
BstNI	CCWGG	4 cut(s)	1083, 1249, 1743, 1805
BstNSI	RCATGY	4 cut(s)	160, 567, 770, 1627
BstPAI	GACNNNNGTC	1 cut(s)	1799
BstSCI	CCNGG	7 cut(s)	586, 1081, 1247, 1310, 1664, 1741, 1803
BstSFI	CTRYAG	2 cut(s)	653, 733
BstSLI	GKGCMC	2 cut(s)	613, 1476
BstSNI	TACGTA	1 cut(s)	1336
BstUI	CGCG	2 cut(s)	694, 931
BstV1I	GCAGC	7 cut(s)	87, 667, 1012, 1024, 1210, 1575, 1656
BstV2I	GAAGAC	1 cut(s)	1524
BstX2I	RGATCY	5 cut(s)	340, 526, 1244, 1342, 1699
BstXI	CCANNNNNNTGG	3 cut(s)	1089, 1386, 1513
BstYI	RGATCY	5 cut(s)	340, 526, 1244, 1342, 1699
BsuI	GTATCC	1 cut(s)	1830
BsuRI	GGCC	4 cut(s)	5, 1095, 1431, 1818
BtgI	CCRYGG	1 cut(s)	6
BtsI	GCAGTG	1 cut(s)	1590
BtsIMutI	CAGTG	6 cut(s)	541, 567, 810, 949, 1474, 1590
BveI	ACCTGC	1 cut(s)	1787
Cac8I	GCNNGC	3 cut(s)	1625, 1870, 1874
CaiI	CAGNNNCTG	1 cut(s)	1779
CciI	TCATGA	1 cut(s)	265
CfoI	GCGC	1 cut(s)	696
Cfr10I	RCCGGY	1 cut(s)	1431
Cfr13I	GGNCC	3 cut(s)	307, 1093, 1801
CseI	GACGC	1 cut(s)	842
CsiI	ACCWGGT	1 cut(s)	1081
Csp6I	GTAC	6 cut(s)	160, 577, 816, 971, 1316, 1808
CspCI	CAANNNNNGTGG	2 cut(s)	163, 198
CviQI	GTAC	6 cut(s)	160, 577, 816, 971, 1316, 1808
DpnI	GATC	8 cut(s)	218, 342, 528, 1246, 1344, 1489, 1608, 1701
DpnII	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
EaeI	YGGCCR	3 cut(s)	3, 1429, 1816
Eam1104I	CTCTTC	6 cut(s)	24, 56, 114, 796, 1518, 1704
EarI	CTCTTC	6 cut(s)	24, 56, 114, 796, 1518, 1704
EciI	GGCGGA	1 cut(s)	1239
Ecl136II	GAGCTC	1 cut(s)	263
Eco105I	TACGTA	1 cut(s)	1336
Eco130I	CCWWGG	2 cut(s)	6, 432
Eco24I	GRGCYC	1 cut(s)	265
Eco31I	GGTCTC	2 cut(s)	193, 1395
Eco47I	GGWCC	2 cut(s)	307, 1801
Eco53kI	GAGCTC	1 cut(s)	263
Eco57I	CTGAAG	2 cut(s)	473, 1728
EcoICRI	GAGCTC	1 cut(s)	263
EcoO109I	RGGNCCY	2 cut(s)	307, 1801
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	4 cut(s)	1081, 1247, 1741, 1803
EcoT14I	CCWWGG	2 cut(s)	6, 432
EcoT22I	ATGCAT	2 cut(s)	796, 1558
EcoT38I	GRGCYC	1 cut(s)	265
ErhI	CCWWGG	2 cut(s)	6, 432
Esp3I	CGTCTC	1 cut(s)	236
FaqI	GGGAC	3 cut(s)	320, 1422, 1807
FbaI	TGATCA	1 cut(s)	1606
Fnu4HI	GCNGC	8 cut(s)	76, 656, 1001, 1038, 1151, 1199, 1589, 1670
FriOI	GRGCYC	1 cut(s)	265
Fsp4HI	GCNGC	8 cut(s)	76, 656, 1001, 1038, 1151, 1199, 1589, 1670
FspBI	CTAG	7 cut(s)	606, 861, 1056, 1127, 1242, 1401, 1599
GlaI	GCGC	1 cut(s)	695
GluI	GCNGC	8 cut(s)	76, 656, 1001, 1038, 1151, 1199, 1589, 1670
GsuI	CTGGAG	1 cut(s)	1565
HaeIII	GGCC	4 cut(s)	5, 1095, 1431, 1818
HapII	CCGG	5 cut(s)	252, 588, 1311, 1432, 1665
HgaI	GACGC	1 cut(s)	842
HhaI	GCGC	1 cut(s)	696
Hin1I	GRCGYC	1 cut(s)	853
Hin6I	GCGC	1 cut(s)	694
HinP1I	GCGC	1 cut(s)	694
HincII	GTYRAC	1 cut(s)	229
HindII	GTYRAC	1 cut(s)	229
HinfI	GANTC	9 cut(s)	169, 649, 700, 741, 874, 1177, 1375, 1441, 1880
HpaII	CCGG	5 cut(s)	252, 588, 1311, 1432, 1665
HphI	GGTGA	7 cut(s)	241, 410, 448, 995, 1068, 1339, 1838
Hpy166II	GTNNAC	7 cut(s)	229, 249, 553, 579, 611, 1053, 1457
Hpy8I	GTNNAC	7 cut(s)	229, 249, 553, 579, 611, 1053, 1457
HpyCH4III	ACNGT	6 cut(s)	287, 481, 536, 907, 975, 1469
HpyCH4IV	ACGT	4 cut(s)	225, 245, 1335, 1737
HpyF10VI	GCNNNNNNNGC	4 cut(s)	148, 1159, 1572, 1869
HpySE526I	ACGT	4 cut(s)	225, 245, 1335, 1737
Hsp92I	GRCGYC	1 cut(s)	853
HspAI	GCGC	1 cut(s)	694
KflI	GGGWCCC	1 cut(s)	307
Ksp22I	TGATCA	1 cut(s)	1606
Kzo9I	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
LguI	GCTCTTC	1 cut(s)	1518
LmnI	GCTCC	2 cut(s)	260, 922
Lsp1109I	GCAGC	7 cut(s)	87, 667, 1012, 1024, 1210, 1575, 1656
LweI	GCATC	7 cut(s)	138, 184, 725, 1024, 1180, 1289, 1297
MabI	ACCWGGT	1 cut(s)	1081
MaeI	CTAG	7 cut(s)	606, 861, 1056, 1127, 1242, 1401, 1599
MaeII	ACGT	4 cut(s)	225, 245, 1335, 1737
MaeIII	GTNAC	3 cut(s)	481, 808, 1769
MalI	GATC	8 cut(s)	218, 342, 528, 1246, 1344, 1489, 1608, 1701
MboI	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
MfeI	CAATTG	1 cut(s)	1659
MflI	RGATCY	5 cut(s)	340, 526, 1244, 1342, 1699
MhlI	GDGCHC	3 cut(s)	265, 613, 1476
MlsI	TGGCCA	2 cut(s)	5, 1818
MluCI	AATT	9 cut(s)	389, 409, 639, 899, 937, 1280, 1659, 1728, 1757
MluNI	TGGCCA	2 cut(s)	5, 1818
MlyI	GAGTC	3 cut(s)	163, 694, 868
MmeI	TCCRAC	6 cut(s)	260, 872, 889, 1385, 1403, 1768
Mox20I	TGGCCA	2 cut(s)	5, 1818
Mph1103I	ATGCAT	2 cut(s)	796, 1558
MscI	TGGCCA	2 cut(s)	5, 1818
MseI	TTAA	4 cut(s)	408, 842, 1484, 1842
MslI	CAYNNNNRTG	3 cut(s)	1105, 1781, 1824
Msp20I	TGGCCA	2 cut(s)	5, 1818
MspA1I	CMGCKG	1 cut(s)	1352
MspI	CCGG	5 cut(s)	252, 588, 1311, 1432, 1665
MspR9I	CCNGG	7 cut(s)	588, 1083, 1249, 1312, 1666, 1743, 1805
MunI	CAATTG	1 cut(s)	1659
Mva1269I	GAATGC	2 cut(s)	498, 1672
MvaI	CCWGG	4 cut(s)	1083, 1249, 1743, 1805
MvnI	CGCG	2 cut(s)	694, 931
MwoI	GCNNNNNNNGC	4 cut(s)	148, 1159, 1572, 1869
NciI	CCSGG	3 cut(s)	588, 1312, 1666
NcoI	CCATGG	1 cut(s)	6
NdeII	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
NlaIV	GGNNCC	7 cut(s)	204, 308, 309, 924, 1094, 1701, 1802
NmuCI	GTSAC	3 cut(s)	481, 808, 1769
NsiI	ATGCAT	2 cut(s)	796, 1558
NspI	RCATGY	4 cut(s)	160, 567, 770, 1627
OliI	CACNNNNGTG	2 cut(s)	1781, 1824
PaeI	GCATGC	1 cut(s)	1627
PagI	TCATGA	1 cut(s)	265
PaqCI	CACCTGC	1 cut(s)	1787
PciSI	GCTCTTC	1 cut(s)	1518
PctI	GAATGC	2 cut(s)	498, 1672
PfeI	GAWTC	6 cut(s)	649, 741, 1177, 1375, 1441, 1880
PkrI	GCNGC	8 cut(s)	77, 657, 1002, 1039, 1152, 1200, 1590, 1671
PleI	GAGTC	3 cut(s)	163, 694, 868
PpsI	GAGTC	3 cut(s)	163, 694, 868
Ppu21I	YACGTR	1 cut(s)	1336
PpuMI	RGGWCCY	2 cut(s)	307, 1801
PshAI	GACNNNNGTC	1 cut(s)	1799
Psp124BI	GAGCTC	1 cut(s)	265
Psp1406I	AACGTT	1 cut(s)	1737
Psp5II	RGGWCCY	2 cut(s)	307, 1801
Psp6I	CCWGG	4 cut(s)	1081, 1247, 1741, 1803
PspGI	CCWGG	4 cut(s)	1081, 1247, 1741, 1803
PspN4I	GGNNCC	7 cut(s)	204, 308, 309, 924, 1094, 1701, 1802
PspPI	GGNCC	3 cut(s)	307, 1093, 1801
PspPPI	RGGWCCY	2 cut(s)	307, 1801
PstI	CTGCAG	2 cut(s)	657, 737
PstNI	CAGNNNCTG	1 cut(s)	1779
PsuI	RGATCY	5 cut(s)	340, 526, 1244, 1342, 1699
RsaI	GTAC	6 cut(s)	161, 578, 817, 972, 1317, 1809
RsaNI	GTAC	6 cut(s)	160, 577, 816, 971, 1316, 1808
RseI	CAYNNNNRTG	3 cut(s)	1105, 1781, 1824
SacI	GAGCTC	1 cut(s)	265
SapI	GCTCTTC	1 cut(s)	1518
SaqAI	TTAA	4 cut(s)	408, 842, 1484, 1842
SatI	GCNGC	8 cut(s)	76, 656, 1001, 1038, 1151, 1199, 1589, 1670
Sau3AI	GATC	8 cut(s)	216, 340, 526, 1244, 1342, 1487, 1606, 1699
Sau96I	GGNCC	3 cut(s)	307, 1093, 1801
SchI	GAGTC	3 cut(s)	163, 694, 868
ScrFI	CCNGG	7 cut(s)	588, 1083, 1249, 1312, 1666, 1743, 1805
SduI	GDGCHC	3 cut(s)	265, 613, 1476
SexAI	ACCWGGT	1 cut(s)	1081
SfaNI	GCATC	7 cut(s)	138, 184, 725, 1024, 1180, 1289, 1297
SfcI	CTRYAG	2 cut(s)	653, 733
SinI	GGWCC	2 cut(s)	307, 1801
SmiMI	CAYNNNNRTG	3 cut(s)	1105, 1781, 1824
SmlI	CTYRAG	1 cut(s)	878
SmoI	CTYRAG	1 cut(s)	878
SnaBI	TACGTA	1 cut(s)	1336
SpeI	ACTAGT	1 cut(s)	605
SphI	GCATGC	1 cut(s)	1627
Sse9I	AATT	9 cut(s)	389, 409, 639, 899, 937, 1280, 1659, 1728, 1757
SsiI	CCGC	5 cut(s)	931, 1150, 1224, 1350, 1480
SspI	AATATT	1 cut(s)	596
SspMI	CTAG	7 cut(s)	606, 861, 1056, 1127, 1242, 1401, 1599
SstI	GAGCTC	1 cut(s)	265
StyD4I	CCNGG	7 cut(s)	586, 1081, 1247, 1310, 1664, 1741, 1803
StyI	CCWWGG	2 cut(s)	6, 432
TaaI	ACNGT	6 cut(s)	287, 481, 536, 907, 975, 1469
TaiI	ACGT	4 cut(s)	228, 248, 1338, 1740
TaqI	TCGA	3 cut(s)	94, 240, 964
TaqII	GACCGA	1 cut(s)	266
TasI	AATT	9 cut(s)	389, 409, 639, 899, 937, 1280, 1659, 1728, 1757
TatI	WGTACW	1 cut(s)	576
TauI	GCSGC	1 cut(s)	1153
TfiI	GAWTC	6 cut(s)	649, 741, 1177, 1375, 1441, 1880
Tru1I	TTAA	4 cut(s)	408, 842, 1484, 1842
Tru9I	TTAA	4 cut(s)	408, 842, 1484, 1842
TscAI	CASTG	6 cut(s)	541, 574, 817, 949, 1474, 1590
TseFI	GTSAC	3 cut(s)	481, 808, 1769
TseI	GCWGC	7 cut(s)	75, 655, 1000, 1037, 1198, 1588, 1669
Tsp45I	GTSAC	3 cut(s)	481, 808, 1769
TspDTI	ATGAA	5 cut(s)	120, 282, 681, 1095, 1374
TspGWI	ACGGA	3 cut(s)	489, 734, 1319
TspRI	CASTG	6 cut(s)	541, 574, 817, 949, 1474, 1590
VneI	GTGCAC	1 cut(s)	609
VpaK11BI	GGWCC	2 cut(s)	307, 1801
XapI	RAATTY	5 cut(s)	389, 639, 899, 1728, 1757
XceI	RCATGY	4 cut(s)	160, 567, 770, 1627
XcmI	CCANNNNNNNNNTGG	2 cut(s)	181, 1086
XspI	CTAG	7 cut(s)	606, 861, 1056, 1127, 1242, 1401, 1599
Zsp2I	ATGCAT	2 cut(s)	796, 1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.