pycom16g01630

Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0015839
Physical Location & Seq
Forward (+)
1008550 .. 1011164
2615 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g01630.1

Sequence Viewer

Length: 1902 bp
ATGGCTATGGCGAACAAATACGAAGTGGAGGAGGAGGAGGAGGAGGTGCAGAGCTTTGGAAAGCGGCTGAAATGGAGCAGATACGAGGAGCCTCTGGAGGGGGAGGAAGAAGAAGAGGACGACGACGACGACGAGAGCCAGCTCGCTCTGAAGCCGTGGACGACGGCGTTCCCAATGAGGCCGGCGTCGTTTGTGGTGTCGGATGCTCTGGAGCCCGACAGTCCTATCATTTACGTCAACAAAGTCTTTGAGACCTTCACCGGCTATTGTGCCCACGAGGTCCTCGGCCGAAACTGTCGATTCCTGCAATATAGGGACCCTCATGCTCAAAGACGGCATCCTCTTGTAGATCCAGTTGTGGTTTCGGAGATTCGAAGGTGTCTCAAGGAAGGAGTTGAGTTTCAAGGAGAGCTTCTGAATTTCAGCAAGGATGGCACTCCCTTGGTGAATAGACTAAGACTGAAACCTATACACGATGATAACGGAACCGTCACTCACATCATAGGCATTCAAGTATTTTCTGAAGCAAAAATAGATCTCAACAGTGTATCATATCCAGTTTACAAACAGACATGCAATCTACAGTCTGATCAATCTGGTAAATATCCTCTCATCACTGGACAAACACCTTTCACCCAGTATCACGATATATGCGGGATTCTTCAGCTCTCTGATGAAGTTTTGGCTCACAACATTTTGTCACGCTTGACTCCGAGGGATGTGGCATCCATTGGGTCTGTCTGTAGAAGAATCCGCCAACTGACTAAAAATGAGCATGTGAGGAAGATGGTATGCCAAAATGCATGGGGAAGAGAAGTGACCGGTACATTGGAACTCATGACTAACAAGTTAGGGTGGGGGCGTCTAGCTAGGGAACTGACAACCCTTGAGGCTGTTTCTTGGAGGAAATTTACAGTTGGAGGTGCCGTAGAGCCTTCAAGATGCAATTTTGGTGCTTGTTCTGTAGGAAATCGGCTTGTGCTATTTGGAGGTGAAGGAGTTGATATGCAGCCAATGAACGACACATTTGTTCTCAATCTTGATGCTGCCAATCCTGAGTGGTGTCGAGTAAGTGTGAAATCATCGCCACCAGGGCGTTGGGGCCACACCCTTTCATGGTTGAATGGTTCTTGGTTGGTCGTATTTGGAGGCTGTGGGCGGGAAGGATTGCTCAATGATGTGTTCGTACTTGACTTGGATGCCAAGCAGCCAACATGGAAAGAAGTTTTTGGTGGAACTCCCCCTCCTCCTAGATCCTGGCACAGCTCTTGCACATTAGAAGGTTCGAAATTGGTTGTGTCGGGTGGATGCACAGATGCTGGGGTCCTTCTTAGTGACACGTACTTATTGGATCTGGCAACAGACAACCCAAGATGGAGAGAGATTCCAACTTCATGGGCTCCTCCCTCTAGGTTGGGGCATTCCCTCTCTGTTTATGGTCGATCAAAGATTCTCATGTTTGGTGGACTTGCCAACAGTGGGCACTTGCGGTTACGATCAGGGGAGACTTACACCATTGATTTGGAAGATGAAAACCCCCAGTGGAGGCAACTGGAGTGTGATGCGTTCACCAGCATGGGCAGCCAGAGTGCAGTGGTTCCCCCTCCCAGACTTGACCATGTTGCAGTCAGCATGCCTTGCGGAAGAATTATAATATTTGGCGGTTCAATCGCGGGGCTGCATTCTCCTTCTCAGCTTTTCCTCTTGGATCCTTCGGAAGAGAAACCATCATGGAGAATTCTCAACGTTCCAGGGCAACCGCCAAAATTTGCTTGGGGCCATAGCACTTGCGTGGTCGGAGGGACAAGGGTCCTGGTGTTGGGTGGGCACACAGGTGAAGAGTGGATACTTAATGACTTGTATGAGTTGCGCTTAGCAAGCAAGCAGGATTCAGACCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
F-box Kelch_2 Kelch_4 PAS_9

Protein Analysis

634

Amino Acids

70.57

Weight (kDa)

5.48

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 70 - 171 6.9e-15 PAS domain
PAS_3 PF08447 76 - 170 8.7e-08 PAS fold
Kelch_KLHDC2_KLHL20_DRC7 PF24681 295 - 489 1.2e-37 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 297 - 455 6.6e-25 FBX42, beta-propeller domain
Beta-prop_TYW4 PF13418 313 - 556 5.5e-09 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 328 - 521 1.6e-14 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 352 - 609 2e-16 Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 406 - 523 1.5e-16 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 464 - 628 1.1e-16 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 529 - 628 2.8e-06 Attractin/LZTR1 beta-propeller
Kelch_KLHDC2_KLHL20_DRC7 PF24681 530 - 629 1.2e-13 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_2 PF07646 538 - 585 1.7e-07 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015839)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68050
fragaria_vesca FvH4_4g33490
malus_domestica MD16G1018000.v1.1
prunus_persica Prupe.1G334000_v2.0.a1
pyrus_communis pycom16g01630
rosa_chinensis RchiOBHm_Chr4g0442801
rosa_laevigata RLG00000005983
rosa_multiflora Rmu_ssc0000204.1_g000019
rosa_roxburghii Rroxscaffold_5G00383580
rosa_rugosa Rorug04G0343300
rosa_samantha Rh4AG395800 Rh4BG408700 Rh4CG424300 Rh4DG402800
rosa_wichuraiana Rw4G034210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1652
AccB1I GGYRCC 1 cut(s) 923
AccII CGCG 1 cut(s) 1673
AciI CCGC 9 cut(s) 64, 654, 754, 1159, 1489, 1641, 1662, 1673, 1760
AclI AACGTT 1 cut(s) 1746
AclWI GGATC 5 cut(s) 344, 1248, 1359, 1703, 1716
AcoI YGGCCR 1 cut(s) 286
AcsI RAATTY 4 cut(s) 418, 908, 1737, 1766
AcuI CTGAAG 3 cut(s) 170, 543, 647
AcyI GRCGYC 2 cut(s) 185, 862
AfaI GTAC 3 cut(s) 826, 1188, 1343
AfiI CCNNNNNNNGG 5 cut(s) 98, 1116, 1479, 1545, 1819
AflIII ACRYGT 1 cut(s) 1338
AgeI ACCGGT 1 cut(s) 821
AgsI TTSAA 5 cut(s) 404, 512, 939, 1123, 1668
AjnI CCWGG 4 cut(s) 1090, 1256, 1750, 1812
AleI CACNNNNGTG 2 cut(s) 1790, 1833
AloI GAACNNNNNNTCC 2 cut(s) 1228, 1260
AluBI AGCT 7 cut(s) 54, 142, 412, 667, 869, 1266, 1696
AluI AGCT 7 cut(s) 54, 142, 412, 667, 869, 1266, 1696
Alw26I GTCTC 3 cut(s) 245, 386, 1499
AlwI GGATC 5 cut(s) 344, 1248, 1359, 1703, 1716
AlwNI CAGNNNCTG 1 cut(s) 1319
AoxI GGCC 4 cut(s) 179, 286, 1102, 1777
ApeKI GCWGC 5 cut(s) 1009, 1046, 1207, 1581, 1678
ApoI RAATTY 4 cut(s) 418, 908, 1737, 1766
AsiGI ACCGGT 1 cut(s) 821
AspLEI GCGC 1 cut(s) 1872
AspS9I GGNCC 6 cut(s) 280, 316, 1102, 1324, 1777, 1810
AsuHPI GGTGA 6 cut(s) 250, 457, 625, 1004, 1561, 1847
AsuII TTCGAA 2 cut(s) 373, 1286
AvaII GGWCC 4 cut(s) 280, 316, 1324, 1810
BaeGI GKGCMC 3 cut(s) 274, 1485, 1830
BamHI GGATCC 1 cut(s) 1708
BanI GGYRCC 1 cut(s) 923
BanII GRGCYC 2 cut(s) 216, 1402
BarI GAAGNNNNNNTAC 2 cut(s) 1830, 1862
BauI CACGAG 1 cut(s) 275
BbvI GCAGC 5 cut(s) 1021, 1033, 1219, 1593, 1665
BccI CCATC 4 cut(s) 425, 781, 1368, 1735
BceAI ACGGC 4 cut(s) 139, 180, 350, 911
BciT130I CCWGG 4 cut(s) 1092, 1258, 1752, 1814
BciVI GTATCC 1 cut(s) 1839
BclI TGATCA 1 cut(s) 589
BcoDI GTCTC 3 cut(s) 245, 386, 1499
BfaI CTAG 4 cut(s) 866, 870, 1251, 1410
BfmI CTRYAG 3 cut(s) 581, 742, 963
BfuI GTATCC 1 cut(s) 1839
BglI GCCNNNNNGGC 1 cut(s) 1093
BglII AGATCT 1 cut(s) 535
BisI GCNGC 6 cut(s) 65, 1010, 1047, 1208, 1582, 1679
BlpI GCTNAGC 1 cut(s) 1873
BlsI GCNGC 6 cut(s) 66, 1011, 1048, 1209, 1583, 1680
Bme1390I CCNGG 4 cut(s) 1092, 1258, 1752, 1814
Bme18I GGWCC 4 cut(s) 280, 316, 1324, 1810
BmgT120I GGNCC 6 cut(s) 280, 316, 1102, 1324, 1777, 1810
BmrFI CCNGG 4 cut(s) 1092, 1258, 1752, 1814
BmrI ACTGGG 2 cut(s) 631, 1534
BmsI GCATC 9 cut(s) 193, 346, 734, 932, 1033, 1189, 1298, 1306, 1552
BmuI ACTGGG 2 cut(s) 631, 1534
BoxI GACNNNNGTC 1 cut(s) 1808
BpmI CTGGAG 3 cut(s) 116, 230, 1574
Bpu1102I GCTNAGC 1 cut(s) 1873
Bpu14I TTCGAA 2 cut(s) 373, 1286
BpuEI CTTGAG 2 cut(s) 368, 908
BsaAI YACGTR 1 cut(s) 1341
BsaHI GRCGYC 2 cut(s) 185, 862
BsaI GGTCTC 1 cut(s) 245
BsaJI CCNNGG 6 cut(s) 155, 283, 441, 713, 1091, 1751
BsaWI WCCGGW 1 cut(s) 821
BsaXI ACNNNNNCTCC 4 cut(s) 912, 942, 1228, 1258
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 1116, 1479, 1545, 1819
Bse118I RCCGGY 3 cut(s) 181, 260, 821
Bse1I ACTGG 6 cut(s) 353, 557, 622, 637, 1540, 1557
BseBI CCWGG 4 cut(s) 1092, 1258, 1752, 1814
BseDI CCNNGG 6 cut(s) 155, 283, 441, 713, 1091, 1751
BseGI GGATG 7 cut(s) 208, 337, 436, 724, 725, 1204, 1313
BseLI CCNNNNNNNGG 5 cut(s) 98, 1116, 1479, 1545, 1819
BseMII CTCAG 2 cut(s) 1047, 1706
BseNI ACTGG 6 cut(s) 353, 557, 622, 637, 1540, 1557
BseRI GAGGAG 8 cut(s) 44, 47, 50, 53, 56, 101, 1236, 1392
BseSI GKGCMC 3 cut(s) 274, 1485, 1830
BseX3I CGGCCG 1 cut(s) 286
BseXI GCAGC 5 cut(s) 1021, 1033, 1219, 1593, 1665
BseYI CCCAGC 1 cut(s) 1319
BsgI GTGCAG 2 cut(s) 68, 1611
Bsh1236I CGCG 1 cut(s) 1673
Bsh1285I CGRYCG 1 cut(s) 289
BshFI GGCC 4 cut(s) 181, 288, 1104, 1779
BshNI GGYRCC 1 cut(s) 923
BshTI ACCGGT 1 cut(s) 821
BsiEI CGRYCG 1 cut(s) 289
BsiSI CCGG 3 cut(s) 182, 261, 822
BslFI GGGAC 2 cut(s) 329, 1816
BslI CCNNNNNNNGG 5 cut(s) 98, 1116, 1479, 1545, 1819
BsmAI GTCTC 3 cut(s) 245, 386, 1499
BsmFI GGGAC 2 cut(s) 329, 1816
BsmI GAATGC 3 cut(s) 507, 1420, 1681
BsnI GGCC 4 cut(s) 181, 288, 1104, 1779
Bso31I GGTCTC 1 cut(s) 245
Bsp119I TTCGAA 2 cut(s) 373, 1286
Bsp1286I GDGCHC 5 cut(s) 216, 274, 1402, 1485, 1830
Bsp143I GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
Bsp1720I GCTNAGC 1 cut(s) 1873
BspACI CCGC 9 cut(s) 64, 654, 754, 1159, 1489, 1641, 1662, 1673, 1760
BspANI GGCC 4 cut(s) 181, 288, 1104, 1779
BspCNI CTCAG 2 cut(s) 1048, 1705
BspFNI CGCG 1 cut(s) 1673
BspHI TCATGA 1 cut(s) 837
BspPI GGATC 5 cut(s) 344, 1248, 1359, 1703, 1716
BspT104I TTCGAA 2 cut(s) 373, 1286
BspT107I GGYRCC 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 245
BsrFI RCCGGY 3 cut(s) 181, 260, 821
BsrI ACTGG 6 cut(s) 353, 557, 622, 637, 1540, 1557
BssAI RCCGGY 3 cut(s) 181, 260, 821
BssECI CCNNGG 6 cut(s) 155, 283, 441, 713, 1091, 1751
BssMI GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
BssNI GRCGYC 2 cut(s) 185, 862
BssSI CACGAG 1 cut(s) 275
BssT1I CCWWGG 1 cut(s) 441
Bst2BI CACGAG 1 cut(s) 275
Bst2UI CCWGG 4 cut(s) 1092, 1258, 1752, 1814
Bst4CI ACNGT 7 cut(s) 221, 296, 490, 545, 585, 916, 1478
Bst6I CTCTTC 4 cut(s) 108, 805, 1713, 1833
BstACI GRCGYC 2 cut(s) 185, 862
BstAPI GCANNNNNTGC 1 cut(s) 1638
BstBAI YACGTR 1 cut(s) 1341
BstBI TTCGAA 2 cut(s) 373, 1286
BstC8I GCNNGC 6 cut(s) 140, 144, 183, 1634, 1879, 1883
BstDEI CTNAG 5 cut(s) 455, 1056, 1331, 1692, 1873
BstDSI CCRYGG 1 cut(s) 155
BstF5I GGATG 7 cut(s) 208, 337, 436, 724, 725, 1204, 1313
BstFNI CGCG 1 cut(s) 1673
BstHHI GCGC 1 cut(s) 1872
BstKTI GATC 8 cut(s) 352, 538, 592, 1256, 1354, 1445, 1499, 1711
BstMAI GTCTC 3 cut(s) 245, 386, 1499
BstMBI GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
BstMCI CGRYCG 1 cut(s) 289
BstMWI GCNNNNNNNGC 5 cut(s) 432, 1093, 1581, 1638, 1878
BstNI CCWGG 4 cut(s) 1092, 1258, 1752, 1814
BstNSI RCATGY 3 cut(s) 576, 779, 1636
BstPAI GACNNNNGTC 1 cut(s) 1808
BstSCI CCNGG 4 cut(s) 1090, 1256, 1750, 1812
BstSFI CTRYAG 3 cut(s) 581, 742, 963
BstSLI GKGCMC 3 cut(s) 274, 1485, 1830
BstUI CGCG 1 cut(s) 1673
BstV1I GCAGC 5 cut(s) 1021, 1033, 1219, 1593, 1665
BstX2I RGATCY 5 cut(s) 349, 535, 1253, 1351, 1708
BstXI CCANNNNNNTGG 3 cut(s) 1098, 1395, 1522
BstYI RGATCY 5 cut(s) 349, 535, 1253, 1351, 1708
BstZI CGGCCG 1 cut(s) 286
BsuI GTATCC 1 cut(s) 1839
BsuRI GGCC 4 cut(s) 181, 288, 1104, 1779
BtgI CCRYGG 1 cut(s) 155
BtgZI GCGATG 1 cut(s) 1068
BtsCI GGATG 7 cut(s) 208, 337, 436, 724, 725, 1204, 1313
BtsI GCAGTG 1 cut(s) 1599
BtsIMutI CAGTG 6 cut(s) 550, 615, 1483, 1547, 1599, 1897
Cac8I GCNNGC 6 cut(s) 140, 144, 183, 1634, 1879, 1883
CaiI CAGNNNCTG 1 cut(s) 1319
CciI TCATGA 1 cut(s) 837
CfoI GCGC 1 cut(s) 1872
Cfr10I RCCGGY 3 cut(s) 181, 260, 821
Cfr13I GGNCC 6 cut(s) 280, 316, 1102, 1324, 1777, 1810
CseI GACGC 2 cut(s) 174, 851
Csp6I GTAC 3 cut(s) 825, 1187, 1342
CspAI ACCGGT 1 cut(s) 821
CviQI GTAC 3 cut(s) 825, 1187, 1342
DdeI CTNAG 5 cut(s) 455, 1056, 1331, 1692, 1873
DpnI GATC 8 cut(s) 351, 537, 591, 1255, 1353, 1444, 1498, 1710
DpnII GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
EaeI YGGCCR 1 cut(s) 286
EagI CGGCCG 1 cut(s) 286
Eam1104I CTCTTC 4 cut(s) 108, 805, 1713, 1833
EarI CTCTTC 4 cut(s) 108, 805, 1713, 1833
EciI GGCGGA 1 cut(s) 743
EclXI CGGCCG 1 cut(s) 286
Eco130I CCWWGG 1 cut(s) 441
Eco24I GRGCYC 2 cut(s) 216, 1402
Eco31I GGTCTC 1 cut(s) 245
Eco47I GGWCC 4 cut(s) 280, 316, 1324, 1810
Eco52I CGGCCG 1 cut(s) 286
Eco57I CTGAAG 3 cut(s) 170, 543, 647
EcoO109I RGGNCCY 4 cut(s) 280, 316, 1324, 1810
EcoRI GAATTC 1 cut(s) 1737
EcoRII CCWGG 4 cut(s) 1090, 1256, 1750, 1812
EcoT14I CCWWGG 1 cut(s) 441
EcoT22I ATGCAT 1 cut(s) 805
EcoT38I GRGCYC 2 cut(s) 216, 1402
ErhI CCWWGG 1 cut(s) 441
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FaqI GGGAC 2 cut(s) 329, 1816
FauI CCCGC 3 cut(s) 647, 1152, 1666
FbaI TGATCA 1 cut(s) 589
Fnu4HI GCNGC 6 cut(s) 65, 1010, 1047, 1208, 1582, 1679
FokI GGATG 7 cut(s) 215, 324, 443, 712, 731, 1211, 1320
FriOI GRGCYC 2 cut(s) 216, 1402
Fsp4HI GCNGC 6 cut(s) 65, 1010, 1047, 1208, 1582, 1679
FspBI CTAG 4 cut(s) 866, 870, 1251, 1410
GlaI GCGC 1 cut(s) 1871
GluI GCNGC 6 cut(s) 65, 1010, 1047, 1208, 1582, 1679
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 3 cut(s) 116, 230, 1574
HaeIII GGCC 4 cut(s) 181, 288, 1104, 1779
HapII CCGG 3 cut(s) 182, 261, 822
HgaI GACGC 2 cut(s) 174, 851
HhaI GCGC 1 cut(s) 1872
Hin1I GRCGYC 2 cut(s) 185, 862
Hin6I GCGC 1 cut(s) 1870
HinP1I GCGC 1 cut(s) 1870
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HinfI GANTC 8 cut(s) 300, 370, 658, 709, 750, 1384, 1450, 1889
HpaII CCGG 3 cut(s) 182, 261, 822
HphI GGTGA 6 cut(s) 250, 457, 625, 1004, 1561, 1847
Hpy166II GTNNAC 5 cut(s) 159, 238, 562, 1466, 1569
Hpy188III TCNNGA 7 cut(s) 95, 209, 644, 838, 939, 1040, 1055
Hpy8I GTNNAC 5 cut(s) 159, 238, 562, 1466, 1569
Hpy99I CGWCG 6 cut(s) 125, 128, 131, 134, 166, 190
HpyCH4III ACNGT 7 cut(s) 221, 296, 490, 545, 585, 916, 1478
HpyCH4IV ACGT 3 cut(s) 234, 1340, 1746
HpyF10VI GCNNNNNNNGC 5 cut(s) 432, 1093, 1581, 1638, 1878
HpyF3I CTNAG 5 cut(s) 455, 1056, 1331, 1692, 1873
HpySE526I ACGT 3 cut(s) 234, 1340, 1746
Hsp92I GRCGYC 2 cut(s) 185, 862
HspAI GCGC 1 cut(s) 1870
KflI GGGWCCC 1 cut(s) 316
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
LmnI GCTCC 4 cut(s) 75, 88, 211, 1405
Lsp1109I GCAGC 5 cut(s) 1021, 1033, 1219, 1593, 1665
LweI GCATC 9 cut(s) 193, 346, 734, 932, 1033, 1189, 1298, 1306, 1552
MaeI CTAG 4 cut(s) 866, 870, 1251, 1410
MaeII ACGT 3 cut(s) 234, 1340, 1746
MaeIII GTNAC 5 cut(s) 490, 699, 817, 1334, 1491
MalI GATC 8 cut(s) 351, 537, 591, 1255, 1353, 1444, 1498, 1710
MboI GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
MflI RGATCY 5 cut(s) 349, 535, 1253, 1351, 1708
MhlI GDGCHC 5 cut(s) 216, 274, 1402, 1485, 1830
MluCI AATT 7 cut(s) 418, 908, 946, 1289, 1647, 1737, 1766
MlyI GAGTC 1 cut(s) 703
MmeI TCCRAC 4 cut(s) 180, 898, 1412, 1777
Mph1103I ATGCAT 1 cut(s) 805
MroNI GCCGGC 1 cut(s) 181
MseI TTAA 1 cut(s) 1851
MslI CAYNNNNRTG 3 cut(s) 1574, 1790, 1833
MspI CCGG 3 cut(s) 182, 261, 822
MspR9I CCNGG 4 cut(s) 1092, 1258, 1752, 1814
Mva1269I GAATGC 3 cut(s) 507, 1420, 1681
MvaI CCWGG 4 cut(s) 1092, 1258, 1752, 1814
MvnI CGCG 1 cut(s) 1673
MwoI GCNNNNNNNGC 5 cut(s) 432, 1093, 1581, 1638, 1878
NaeI GCCGGC 1 cut(s) 183
NdeII GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
NgoMIV GCCGGC 1 cut(s) 181
NmeAIII GCCGAG 1 cut(s) 264
NmuCI GTSAC 4 cut(s) 490, 699, 817, 1334
NsiI ATGCAT 1 cut(s) 805
NspI RCATGY 3 cut(s) 576, 779, 1636
NspV TTCGAA 2 cut(s) 373, 1286
OliI CACNNNNGTG 2 cut(s) 1790, 1833
PaeI GCATGC 1 cut(s) 1636
PagI TCATGA 1 cut(s) 837
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 129
PctI GAATGC 3 cut(s) 507, 1420, 1681
PdiI GCCGGC 1 cut(s) 183
PfeI GAWTC 7 cut(s) 300, 370, 658, 750, 1384, 1450, 1889
PinAI ACCGGT 1 cut(s) 821
PkrI GCNGC 6 cut(s) 66, 1011, 1048, 1209, 1583, 1680
PleI GAGTC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 703
Ppu21I YACGTR 1 cut(s) 1341
PpuMI RGGWCCY 4 cut(s) 280, 316, 1324, 1810
PshAI GACNNNNGTC 1 cut(s) 1808
PsiI TTATAA 1 cut(s) 1652
Psp1406I AACGTT 1 cut(s) 1746
Psp5II RGGWCCY 4 cut(s) 280, 316, 1324, 1810
Psp6I CCWGG 4 cut(s) 1090, 1256, 1750, 1812
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 4 cut(s) 1090, 1256, 1750, 1812
PspPI GGNCC 6 cut(s) 280, 316, 1102, 1324, 1777, 1810
PspPPI RGGWCCY 4 cut(s) 280, 316, 1324, 1810
PstNI CAGNNNCTG 1 cut(s) 1319
PsuI RGATCY 5 cut(s) 349, 535, 1253, 1351, 1708
RsaI GTAC 3 cut(s) 826, 1188, 1343
RsaNI GTAC 3 cut(s) 825, 1187, 1342
RseI CAYNNNNRTG 3 cut(s) 1574, 1790, 1833
SaqAI TTAA 1 cut(s) 1851
SatI GCNGC 6 cut(s) 65, 1010, 1047, 1208, 1582, 1679
Sau3AI GATC 8 cut(s) 349, 535, 589, 1253, 1351, 1442, 1496, 1708
Sau96I GGNCC 6 cut(s) 280, 316, 1102, 1324, 1777, 1810
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 4 cut(s) 1092, 1258, 1752, 1814
SduI GDGCHC 5 cut(s) 216, 274, 1402, 1485, 1830
SfaNI GCATC 9 cut(s) 193, 346, 734, 932, 1033, 1189, 1298, 1306, 1552
SfcI CTRYAG 3 cut(s) 581, 742, 963
SfuI TTCGAA 2 cut(s) 373, 1286
SinI GGWCC 4 cut(s) 280, 316, 1324, 1810
SmiMI CAYNNNNRTG 3 cut(s) 1574, 1790, 1833
SmlI CTYRAG 2 cut(s) 383, 887
SmoI CTYRAG 2 cut(s) 383, 887
SphI GCATGC 1 cut(s) 1636
Sse9I AATT 7 cut(s) 418, 908, 946, 1289, 1647, 1737, 1766
SsiI CCGC 9 cut(s) 64, 654, 754, 1159, 1489, 1641, 1662, 1673, 1760
SspI AATATT 1 cut(s) 1656
SspMI CTAG 4 cut(s) 866, 870, 1251, 1410
StyD4I CCNGG 4 cut(s) 1090, 1256, 1750, 1812
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 7 cut(s) 221, 296, 490, 545, 585, 916, 1478
TaiI ACGT 3 cut(s) 237, 1343, 1749
TaqI TCGA 5 cut(s) 298, 373, 1066, 1286, 1441
TasI AATT 7 cut(s) 418, 908, 946, 1289, 1647, 1737, 1766
TauI GCSGC 1 cut(s) 67
TfiI GAWTC 7 cut(s) 300, 370, 658, 750, 1384, 1450, 1889
Tru1I TTAA 1 cut(s) 1851
Tru9I TTAA 1 cut(s) 1851
TscAI CASTG 5 cut(s) 550, 622, 1483, 1547, 1599
TseFI GTSAC 4 cut(s) 490, 699, 817, 1334
TseI GCWGC 5 cut(s) 1009, 1046, 1207, 1581, 1678
Tsp45I GTSAC 4 cut(s) 490, 699, 817, 1334
TspDTI ATGAA 5 cut(s) 690, 1031, 1104, 1383, 1545
TspGWI ACGGA 1 cut(s) 498
TspRI CASTG 5 cut(s) 550, 622, 1483, 1547, 1599
VpaK11BI GGWCC 4 cut(s) 280, 316, 1324, 1810
XapI RAATTY 4 cut(s) 418, 908, 1737, 1766
XceI RCATGY 3 cut(s) 576, 779, 1636
XcmI CCANNNNNNNNNTGG 2 cut(s) 1095, 1770
XspI CTAG 4 cut(s) 866, 870, 1251, 1410
Zsp2I ATGCAT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.