Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0010275

Physical Location & Seq

Genomic Coordinates Forward (+)

32760960 .. 32772841

Gene Structure 11882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g35440.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3522 bp

ATGATCGCGAGGCCAATCTCCCCGTCAAATTTGCGGGGAATTCTATATCAACTACAAAGTACAACTTCCTTACTTTTTTGCCTAAAGGACTCTTTGAACAGGCGAGTAGCTAACCTTTACTTCCTTGGAATCTCAATTTTATCAACAACACCAATCAGTCCCGTTCATCCAGTAACCAATGTGGTACCCCTAAGTTTTGTGCTTCTTATTACTCTTGGAAAGGAAGCATGGGAGGATTGGAAGCGTAGACTGAACGATATGACGATAAATAATAATTCAGTGGATGTCTTGCAAGATCAAAGGTGGGAAACTATTCCTTGGAAAAGGTTACAAGTTGGAGATATTGTCAGGATTAAGCAAAACGCATTCTTCCCAGCGGATCTGCTTTTTCTTGCATCTACCAACGCAGATGGTGTCTGCTACATTGAGACTGCAAATTTGGACGGGGAAACTAATTTAAAAATCAGAAAAGCATTGGAAAAGACTTGGGATTACTTGACTCCTGAGAAAGCATCTGAATTTAAAGGAGAAGTGCAGTGTGAACAACCTAACAATTCACTGTACACTTTCACTGGCAATCTCATTGTTGACAAGCAGACACTACCTCTCTCTCCTAACCATCTTCTACTTCGTGGATGCAGCCTCAGGAACACAGAGTACATAGTTGCGGCTGTTGTATTTACAGGTCATGAAACCAAGGTTATGATGAATAGCATGAATGTCCCTTCTAAAAGAAGTACATTAGAGAGAAAACTGGACAAACTTATCATTGGCCTTTTTATTACTCTCTTTTGTATGTGTCTGATTGGAGCCATAGGCAGTGGTGTATTTATCAACTACAAGTACTACTACTTGGGTCTTCGTGGAACAAAAGGAGAGGACTCCTCATACAGCTCATTTAACCCTGATAACCGTTTTGTGGTTTTTATGCTGACGATTCTTACCTTGATTACTCTATACTCGACAATCATCCCTATCTCTCTTTATGTTTCCATCGAGATGATCAAATTTATTCAGTCCACCCAATATATCAACAATGATTTGCGTATGTACCATATGGAAAGCAATACCCCTGCATTGGCTAGGACTTCGAATTTGAATGAGGAACTTGGACAGGTGGAATACATCTTTTCTGATAAAACTGGAACTTTAACAAGAAACTTGATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAACCGGCATCACTGAAATAGAAAGAGGAATAGCACAAAGAAATGGTATAAAACTCAATGAGGAGTACAATTCCAATACAGATCATGAGAAGGGATTTAACTTCAATGATTCCAAGCTTATGCGGGGAGCTTGGAGAAATGAACCTAATCCAGATATCTGTAAGGAATTTTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGATAAGATCACGTATCAAGCTGCATCCCCAGATGAATCTGCTTTGGTCATTGCTGCGAAGAACTTTGGTTTCTTCTTTTACAGGCGTTCACCGACTACTATATGTGTTCGAGAATCTCATGTTGAGAAACTTGGTGATGTCCAAGATGTGTCTTACGAGATTCTAAATGTCCTCGAGTTCAACAGTACAAGGAAGCGTCAGTCTGTTGTATGCCGTTATCCAGATGGCAGGCTTGTCTTGTACTGCAAGGGAGCTGATAACGTGATCTATGAGAGATTGTCTGATGGCCAAGACGATCTGAAGAAAGTATCAAGGGAACACTTGGAACTATTTGGGTCTTCTGGATTACGTACTCTTTGCCTGGCTTATAAAGATTTAAGTCCTGATATGTATGAAAGCTGGAATGAGAAATTCATTCAGGCTAAGTCCACTCTACGGGATCGTGAAAAGAAGCTGGATGAGGTGGCAGAACTCATTGAGACTGATCTCACATTGATTGGATGTACTGCTATTGAAGACAAGCTTCAGGAAGGAGTACCTGCTTGTATAGAGACTCTTGCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGATAAGATGGAAACAGCAATAAATATAGCTTATGCATGCAATTTGATCAATAATGAAATGAAACAGTTCATTATCAGCTCAGAAACTGATGTTATCAGGGAAGCTGAGAACAGGGGTGACCAAGTGGAAATTGCACGTGTCATTAAAGATGAAGTGAAGAAAGATCTGAAGAGGTGCCTTGAGGAAGCACAGCAATATCTTCGCACTGCATCTGGGCCAAAATTAGCACTTGTAATAGATGGCAAGTGTTTGATGTATGCCTTGGACCCAACTTTACGAGTGATGCTACTGAATTTGAGCTTGAATTGTAATTCAGTTGTTTGCTGTCGAGTTTCTCCTTTACAGAAAGCACAGGTGACAAGTATGGTAAGAAAAGGTGCCAAGAAAATAACACTCAGCATTGGTGATGGTGCCAATGATGTGAGCATGATCCAAGCTGCTCATGTTGGTGTTGGAATAAGTGGGCAAGAAGGGATGCAGGCAGTGATGGCTAGTGATTTTGCTATTGCGCAGTTTCGTTTTCTGACTGATTTACTGCTTGTCCATGGGCGGTGGTCTTATATCAGATTATGCAAGGTCATCACATACTTCTTTTACAAGAATCTTACATTCACTTTGACACAATTTTGGTTCACCTTTTATACTGGATATTCTGGTCAAAGGTTTTATGATGATTGGTACCAGTCACTATATAATGTCATATTCACAGCCTTGCCTGTGATCATGGTTGGGCTTTTTGACAAGGATGTCAGTGCAGCCCTTTCCAAGAAGTACCCTGAACTATACAAGGAGGGAATAAGAAATATGTTCTTCAAATGGAGGGTCGTGGCAACGTGGGCATTCTTTTCTGTTTACCAATCTTTAGTCTTCTTCTATTTTGTGACTAGCTCCAGTCATACAAGCGTGGATCCATCTGGCAAGATGTTTGGACTTATGGATATCAGCACGATGACATTCACTTGTGTTGTAGTAACTGTCAACTTGCGTCTGCTGATGAACTGTAATTCAATCACAAGGTGGCATTATATTAGCACTGGAGGAAGCATTGCGTTATGGTTTATATTCGTTTTCATATACTGTTTTGTAGAAAGTTCGAGGAGTGTTTATCAGGTCATATATGTCTTGATGAGTACATTGTACTTCTACATGACACTTCTTCTTGTCCCCATTGTTGCGCTCTTTGGCGACTTTGTTTACCAAGGGATGCAAAGATGGTTCTCCCCATACGATTATCAGATAATTCAGGAACTTCACAGGGATGAGCCAGAAGGTAGGAGCAGGGATGAGTTGCTGGAAATTGGAAACAACCTCACCCCTGCCCAGGCGAGGAGCTACGCTGTAGCTCAACTCCCACGAGAGATTTCGAAACACACTGGGTTTGCTTTCGACTCACCTGGATATGAATCATTCTTTGCCAGACAGGTAGGTGTATATGCCCCTCAAAAGGCATGGGATGTTGCTCGGAGAGCCAGCATGAGAAGGACAACAAAAAAGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0007275 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0048364 GO:0048367 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0097708 GO:0098791 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1174

Amino Acids

133.69

Weight (kDa)

7.63

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	47 - 111	3.9e-25	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	506 - 704	2.6e-21	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	887 - 1133	5.4e-84	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59820
fragaria_vesca	FvH4_4g35440 FvH4_4g35440 FvH4_4g35440 FvH4_4g35440
malus_domestica	MD13G1083400.v1.1 MD16G1082100.v1.1
prunus_persica	Prupe.1G263700_v2.0.a1 Prupe.1G263700_v2.0.a1 Prupe.1G263700_v2.0.a1
pyrus_communis	pycom13g07180 pycom16g07110
rosa_chinensis	RchiOBHm_Chr4g0445071
rosa_laevigata	RLG00000005770
rosa_multiflora	Rmu_sc0003784.1_g000007
rosa_roxburghii	Rroxscaffold_5G00385610
rosa_rugosa	Rorug04G0358500
rosa_samantha	Rh4AG419600 Rh4BG431300 Rh4CG445800
rosa_wichuraiana	Rw4G035950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1797
AasI	GACNNNNNNGTC	1 cut(s)	2768
Acc16I	TGCGCA	1 cut(s)	2532
Acc36I	ACCTGC	1 cut(s)	1975
Acc65I	GGTACC	2 cut(s)	184, 2700
AccB1I	GGYRCC	5 cut(s)	184, 2196, 2399, 2432, 2700
AccI	GTMKAC	1 cut(s)	247
AccII	CGCG	1 cut(s)	8
AciI	CCGC	5 cut(s)	34, 377, 668, 1327, 2572
AclWI	GGATC	5 cut(s)	387, 1875, 2446, 2924, 2937
AcoI	YGGCCR	1 cut(s)	1714
AcsI	RAATTY	9 cut(s)	28, 39, 436, 518, 1007, 1093, 1370, 1838, 2314
AcuI	CTGAAG	3 cut(s)	1748, 1937, 2210
AcvI	CACGTG	1 cut(s)	2159
AdeI	CACNNNGTG	1 cut(s)	3039
AfiI	CCNNNNNNNGG	6 cut(s)	919, 1078, 1863, 3343, 3348, 3466
AflIII	ACRYGT	1 cut(s)	2158
AjnI	CCWGG	3 cut(s)	1788, 3342, 3415
Alw26I	GTCTC	3 cut(s)	422, 1901, 1973
AlwI	GGATC	5 cut(s)	387, 1875, 2446, 2924, 2937
AlwNI	CAGNNNCTG	1 cut(s)	2108
Ama87I	CYCGRG	1 cut(s)	1601
AoxI	GGCC	4 cut(s)	11, 772, 1714, 2237
ApeKI	GCWGC	5 cut(s)	639, 1448, 1481, 2459, 2777
ApoI	RAATTY	9 cut(s)	28, 39, 436, 518, 1007, 1093, 1370, 1838, 2314
ArsI	GACNNNNNNTTYG	6 cut(s)	421, 453, 1078, 1110, 2829, 2861
Asp700I	GAANNNNTTC	2 cut(s)	312, 2087
Asp718I	GGTACC	2 cut(s)	184, 2700
AspLEI	GCGC	2 cut(s)	2533, 3199
AspS9I	GGNCC	2 cut(s)	2237, 2287
AsuHPI	GGTGA	9 cut(s)	1427, 1509, 1574, 2150, 2389, 2438, 2647, 3325, 3405
AsuII	TTCGAA	2 cut(s)	1091, 3386
AvaI	CYCGRG	1 cut(s)	1601
AvaII	GGWCC	1 cut(s)	2287
AxyI	CCTNAGG	2 cut(s)	644, 1410
BalI	TGGCCA	1 cut(s)	1716
BamHI	GGATCC	1 cut(s)	2929
BanI	GGYRCC	5 cut(s)	184, 2196, 2399, 2432, 2700
BauI	CACGAG	1 cut(s)	3375
BbrPI	CACGTG	1 cut(s)	2159
BbsI	GAAGAC	4 cut(s)	851, 1758, 1950, 2881
BbvI	GCAGC	5 cut(s)	651, 1435, 1468, 2446, 2789
BceAI	ACGGC	1 cut(s)	1626
BcgI	CGANNNNNNTGC	2 cut(s)	2204, 2238
BciT130I	CCWGG	3 cut(s)	1790, 3344, 3417
BclI	TGATCA	3 cut(s)	1002, 2067, 2742
BcoDI	GTCTC	3 cut(s)	422, 1901, 1973
BfaI	CTAG	4 cut(s)	1083, 1989, 2514, 2907
BfmI	CTRYAG	1 cut(s)	3360
BfuAI	ACCTGC	1 cut(s)	1975
BglII	AGATCT	1 cut(s)	2185
BisI	GCNGC	6 cut(s)	640, 669, 1449, 1482, 2460, 2778
BlsI	GCNGC	6 cut(s)	641, 670, 1450, 1483, 2461, 2779
BmcAI	AGTACT	1 cut(s)	845
Bme1390I	CCNGG	3 cut(s)	1790, 3344, 3417
Bme18I	GGWCC	1 cut(s)	2287
BmeT110I	CYCGRG	1 cut(s)	1601
BmgT120I	GGNCC	2 cut(s)	2237, 2287
BmiI	GGNNCC	9 cut(s)	186, 811, 1207, 2198, 2289, 2401, 2434, 2702, 2931
BmrFI	CCNGG	3 cut(s)	1790, 3344, 3417
BmrI	ACTGGG	1 cut(s)	3405
BmuI	ACTGGG	1 cut(s)	3405
BpiI	GAAGAC	4 cut(s)	851, 1758, 1950, 2881
BplI	GAGNNNNNCTC	2 cut(s)	869, 901
BpmI	CTGGAG	2 cut(s)	2896, 3078
Bpu14I	TTCGAA	2 cut(s)	1091, 3386
BpuEI	CTTGAG	1 cut(s)	2222
BsaAI	YACGTR	3 cut(s)	1440, 1778, 2159
BsaBI	GATNNNNATC	1 cut(s)	3424
BsaJI	CCNNGG	7 cut(s)	124, 317, 696, 2283, 2566, 3220, 3342
BsaXI	ACNNNNNCTCC	4 cut(s)	330, 360, 1182, 1212
Bsc4I	CCNNNNNNNGG	6 cut(s)	919, 1078, 1863, 3343, 3348, 3466
Bse118I	RCCGGY	1 cut(s)	1208
Bse1I	ACTGG	9 cut(s)	170, 577, 759, 1147, 2671, 2704, 2913, 3061, 3400
Bse21I	CCTNAGG	2 cut(s)	644, 1410
Bse3DI	GCAATG	2 cut(s)	1476, 3066
Bse8I	GATNNNNATC	1 cut(s)	3424
BseBI	CCWGG	3 cut(s)	1790, 3344, 3417
BseDI	CCNNGG	7 cut(s)	124, 317, 696, 2283, 2566, 3220, 3342
BseJI	GATNNNNATC	1 cut(s)	3424
BseLI	CCNNNNNNNGG	6 cut(s)	919, 1078, 1863, 3343, 3348, 3466
BseMI	GCAATG	2 cut(s)	1476, 3066
BseMII	CTCAG	6 cut(s)	495, 658, 1401, 2115, 2118, 2431
BseNI	ACTGG	9 cut(s)	170, 577, 759, 1147, 2671, 2704, 2913, 3061, 3400
BseRI	GAGGAG	5 cut(s)	874, 1206, 1280, 3133, 3364
BseXI	GCAGC	5 cut(s)	651, 1435, 1468, 2446, 2789
BseYI	CCCAGC	1 cut(s)	373
BsgI	GTGCAG	2 cut(s)	554, 2796
Bsh1236I	CGCG	1 cut(s)	8
BshFI	GGCC	4 cut(s)	13, 774, 1716, 2239
BshNI	GGYRCC	5 cut(s)	184, 2196, 2399, 2432, 2700
BsiHKCI	CYCGRG	1 cut(s)	1601
BsiSI	CCGG	1 cut(s)	1209
BslFI	GGGAC	4 cut(s)	144, 707, 1408, 3170
BslI	CCNNNNNNNGG	6 cut(s)	919, 1078, 1863, 3343, 3348, 3466
BsmAI	GTCTC	3 cut(s)	422, 1901, 1973
BsmFI	GGGAC	4 cut(s)	144, 707, 1408, 3170
BsmI	GAATGC	2 cut(s)	365, 2861
BsnI	GGCC	4 cut(s)	13, 774, 1716, 2239
BsoBI	CYCGRG	1 cut(s)	1601
Bsp119I	TTCGAA	2 cut(s)	1091, 3386
Bsp1407I	TGTACA	1 cut(s)	561
Bsp19I	CCATGG	1 cut(s)	2566
Bsp68I	TCGCGA	1 cut(s)	8
BspACI	CCGC	5 cut(s)	34, 377, 668, 1327, 2572
BspANI	GGCC	4 cut(s)	13, 774, 1716, 2239
BspCNI	CTCAG	6 cut(s)	496, 657, 1402, 2114, 2119, 2430
BspFNI	CGCG	1 cut(s)	8
BspHI	TCATGA	2 cut(s)	688, 1288
BspLI	GGNNCC	9 cut(s)	186, 811, 1207, 2198, 2289, 2401, 2434, 2702, 2931
BspMI	ACCTGC	1 cut(s)	1975
BspPI	GGATC	5 cut(s)	387, 1875, 2446, 2924, 2937
BspT104I	TTCGAA	2 cut(s)	1091, 3386
BspT107I	GGYRCC	5 cut(s)	184, 2196, 2399, 2432, 2700
BsrDI	GCAATG	2 cut(s)	1476, 3066
BsrFI	RCCGGY	1 cut(s)	1208
BsrGI	TGTACA	1 cut(s)	561
BsrI	ACTGG	9 cut(s)	170, 577, 759, 1147, 2671, 2704, 2913, 3061, 3400
BssAI	RCCGGY	1 cut(s)	1208
BssECI	CCNNGG	7 cut(s)	124, 317, 696, 2283, 2566, 3220, 3342
BssSI	CACGAG	1 cut(s)	3375
BssT1I	CCWWGG	6 cut(s)	124, 317, 696, 2283, 2566, 3220
Bst2BI	CACGAG	1 cut(s)	3375
Bst2UI	CCWGG	3 cut(s)	1790, 3344, 3417
Bst4CI	ACNGT	8 cut(s)	561, 914, 1402, 1613, 2088, 2998, 3023, 3101
Bst6I	CTCTTC	1 cut(s)	2186
BstAUI	TGTACA	1 cut(s)	561
BstBAI	YACGTR	3 cut(s)	1440, 1778, 2159
BstBI	TTCGAA	2 cut(s)	1091, 3386
BstC8I	GCNNGC	4 cut(s)	1658, 2059, 2502, 3493
BstDEI	CTNAG	8 cut(s)	191, 504, 644, 1410, 1851, 2101, 2127, 2417
BstDSI	CCRYGG	1 cut(s)	2566
BstEII	GGTNACC	1 cut(s)	2138
BstFNI	CGCG	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	2533, 3199
BstMAI	GTCTC	3 cut(s)	422, 1901, 1973
BstMWI	GCNNNNNNNGC	3 cut(s)	2510, 2858, 3488
BstNI	CCWGG	3 cut(s)	1790, 3344, 3417
BstNSI	RCATGY	1 cut(s)	2061
BstPI	GGTNACC	1 cut(s)	2138
BstSCI	CCNGG	3 cut(s)	1788, 3342, 3415
BstSFI	CTRYAG	1 cut(s)	3360
BstSNI	TACGTA	1 cut(s)	1778
BstUI	CGCG	1 cut(s)	8
BstV1I	GCAGC	5 cut(s)	651, 1435, 1468, 2446, 2789
BstV2I	GAAGAC	4 cut(s)	851, 1758, 1950, 2881
BstX2I	RGATCY	3 cut(s)	379, 2185, 2929
BstYI	RGATCY	3 cut(s)	379, 2185, 2929
Bsu36I	CCTNAGG	2 cut(s)	644, 1410
BsuRI	GGCC	4 cut(s)	13, 774, 1716, 2239
BtgI	CCRYGG	1 cut(s)	2566
BtsI	GCAGTG	4 cut(s)	542, 826, 2226, 2511
BtuMI	TCGCGA	1 cut(s)	8
BveI	ACCTGC	1 cut(s)	1975
Cac8I	GCNNGC	4 cut(s)	1658, 2059, 2502, 3493
CaiI	CAGNNNCTG	1 cut(s)	2108
CciI	TCATGA	2 cut(s)	688, 1288
CfoI	GCGC	2 cut(s)	2533, 3199
Cfr10I	RCCGGY	1 cut(s)	1208
Cfr13I	GGNCC	2 cut(s)	2237, 2287
CseI	GACGC	2 cut(s)	1613, 2996
DdeI	CTNAG	8 cut(s)	191, 504, 644, 1410, 1851, 2101, 2127, 2417
DraI	TTTAAA	2 cut(s)	459, 523
DraIII	CACNNNGTG	1 cut(s)	3039
DrdI	GACNNNNNNGTC	1 cut(s)	2768
DseDI	GACNNNNNNGTC	1 cut(s)	2768
EaeI	YGGCCR	1 cut(s)	1714
Eam1104I	CTCTTC	1 cut(s)	2186
EarI	CTCTTC	1 cut(s)	2186
Eco105I	TACGTA	1 cut(s)	1778
Eco130I	CCWWGG	6 cut(s)	124, 317, 696, 2283, 2566, 3220
Eco32I	GATATC	2 cut(s)	1360, 2962
Eco47I	GGWCC	1 cut(s)	2287
Eco57I	CTGAAG	3 cut(s)	1748, 1937, 2210
Eco72I	CACGTG	1 cut(s)	2159
Eco81I	CCTNAGG	2 cut(s)	644, 1410
Eco88I	CYCGRG	1 cut(s)	1601
Eco91I	GGTNACC	1 cut(s)	2138
EcoO65I	GGTNACC	1 cut(s)	2138
EcoRI	GAATTC	1 cut(s)	39
EcoRII	CCWGG	3 cut(s)	1788, 3342, 3415
EcoRV	GATATC	2 cut(s)	1360, 2962
EcoT14I	CCWWGG	6 cut(s)	124, 317, 696, 2283, 2566, 3220
EcoT22I	ATGCAT	1 cut(s)	2059
ErhI	CCWWGG	6 cut(s)	124, 317, 696, 2283, 2566, 3220
FalI	AAGNNNNNCTT	4 cut(s)	49, 81, 1935, 1967
FaqI	GGGAC	4 cut(s)	144, 707, 1408, 3170
FauI	CCCGC	2 cut(s)	27, 1320
FauNDI	CATATG	1 cut(s)	1056
FbaI	TGATCA	3 cut(s)	1002, 2067, 2742
FblI	GTMKAC	1 cut(s)	247
Fnu4HI	GCNGC	6 cut(s)	640, 669, 1449, 1482, 2460, 2778
Fsp4HI	GCNGC	6 cut(s)	640, 669, 1449, 1482, 2460, 2778
FspBI	CTAG	4 cut(s)	1083, 1989, 2514, 2907
FspI	TGCGCA	1 cut(s)	2532
GlaI	GCGC	2 cut(s)	2532, 3198
GluI	GCNGC	6 cut(s)	640, 669, 1449, 1482, 2460, 2778
GsaI	CCCAGC	1 cut(s)	377
GsuI	CTGGAG	2 cut(s)	2896, 3078
HaeIII	GGCC	4 cut(s)	13, 774, 1716, 2239
HapII	CCGG	1 cut(s)	1209
HgaI	GACGC	2 cut(s)	1613, 2996
HhaI	GCGC	2 cut(s)	2533, 3199
Hin6I	GCGC	2 cut(s)	2531, 3197
HinP1I	GCGC	2 cut(s)	2531, 3197
HincII	GTYRAC	2 cut(s)	589, 3001
HindII	GTYRAC	2 cut(s)	589, 3001
HindIII	AAGCTT	2 cut(s)	1319, 1949
HpaII	CCGG	1 cut(s)	1209
HphI	GGTGA	9 cut(s)	1427, 1509, 1574, 2150, 2389, 2438, 2647, 3325, 3405
HpyAV	CCTTC	6 cut(s)	735, 1288, 1952, 2486, 3284, 3495
HpyCH4III	ACNGT	8 cut(s)	561, 914, 1402, 1613, 2088, 2998, 3023, 3101
HpyCH4IV	ACGT	5 cut(s)	1439, 1689, 1777, 2158, 2855
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2510, 2858, 3488
HpyF3I	CTNAG	8 cut(s)	191, 504, 644, 1410, 1851, 2101, 2127, 2417
HpySE526I	ACGT	5 cut(s)	1439, 1689, 1777, 2158, 2855
HspAI	GCGC	2 cut(s)	2531, 3197
KpnI	GGTACC	2 cut(s)	188, 2704
Ksp22I	TGATCA	3 cut(s)	1002, 2067, 2742
LmnI	GCTCC	6 cut(s)	809, 1331, 1679, 2915, 3297, 3351
Lsp1109I	GCAGC	5 cut(s)	651, 1435, 1468, 2446, 2789
MaeI	CTAG	4 cut(s)	1083, 1989, 2514, 2907
MaeII	ACGT	5 cut(s)	1439, 1689, 1777, 2158, 2855
MaeIII	GTNAC	7 cut(s)	172, 327, 2138, 2377, 2706, 2902, 2992
MfeI	CAATTG	1 cut(s)	1185
MflI	RGATCY	3 cut(s)	379, 2185, 2929
MlsI	TGGCCA	1 cut(s)	1716
MluNI	TGGCCA	1 cut(s)	1716
MlyI	GAGTC	6 cut(s)	83, 493, 875, 1430, 1975, 3404
MmeI	TCCRAC	2 cut(s)	316, 2455
Mox20I	TGGCCA	1 cut(s)	1716
Mph1103I	ATGCAT	1 cut(s)	2059
MroXI	GAANNNNTTC	2 cut(s)	312, 2087
MscI	TGGCCA	1 cut(s)	1716
MseI	TTAA	8 cut(s)	354, 458, 522, 900, 1151, 1302, 1805, 2166
MslI	CAYNNNNRTG	3 cut(s)	998, 2469, 3279
Msp20I	TGGCCA	1 cut(s)	1716
MspA1I	CMGCKG	1 cut(s)	377
MspI	CCGG	1 cut(s)	1209
MspR9I	CCNGG	3 cut(s)	1790, 3344, 3417
MunI	CAATTG	1 cut(s)	1185
Mva1269I	GAATGC	2 cut(s)	365, 2861
MvaI	CCWGG	3 cut(s)	1790, 3344, 3417
MvnI	CGCG	1 cut(s)	8
MwoI	GCNNNNNNNGC	3 cut(s)	2510, 2858, 3488
NcoI	CCATGG	1 cut(s)	2566
NdeI	CATATG	1 cut(s)	1056
NlaIV	GGNNCC	9 cut(s)	186, 811, 1207, 2198, 2289, 2401, 2434, 2702, 2931
NmuCI	GTSAC	4 cut(s)	2138, 2377, 2706, 2902
NruI	TCGCGA	1 cut(s)	8
NsbI	TGCGCA	1 cut(s)	2532
NsiI	ATGCAT	1 cut(s)	2059
NspI	RCATGY	1 cut(s)	2061
NspV	TTCGAA	2 cut(s)	1091, 3386
PaeI	GCATGC	1 cut(s)	2061
PaeR7I	CTCGAG	1 cut(s)	1601
PagI	TCATGA	2 cut(s)	688, 1288
PctI	GAATGC	2 cut(s)	365, 2861
PdmI	GAANNNNTTC	2 cut(s)	312, 2087
PfeI	GAWTC	8 cut(s)	129, 937, 1313, 1463, 1541, 1588, 2623, 3425
PkrI	GCNGC	6 cut(s)	641, 670, 1450, 1483, 2461, 2779
PleI	GAGTC	6 cut(s)	83, 493, 875, 1429, 1975, 3404
PmaCI	CACGTG	1 cut(s)	2159
PmlI	CACGTG	1 cut(s)	2159
PpsI	GAGTC	6 cut(s)	83, 493, 875, 1429, 1975, 3404
Ppu21I	YACGTR	3 cut(s)	1440, 1778, 2159
PsiI	TTATAA	1 cut(s)	1797
Psp6I	CCWGG	3 cut(s)	1788, 3342, 3415
PspCI	CACGTG	1 cut(s)	2159
PspEI	GGTNACC	1 cut(s)	2138
PspFI	CCCAGC	1 cut(s)	373
PspGI	CCWGG	3 cut(s)	1788, 3342, 3415
PspN4I	GGNNCC	9 cut(s)	186, 811, 1207, 2198, 2289, 2401, 2434, 2702, 2931
PspPI	GGNCC	2 cut(s)	2237, 2287
PspXI	VCTCGAGB	1 cut(s)	1601
PsrI	GAACNNNNNNTAC	2 cut(s)	641, 673
PstNI	CAGNNNCTG	1 cut(s)	2108
PsuI	RGATCY	3 cut(s)	379, 2185, 2929
RruI	TCGCGA	1 cut(s)	8
RseI	CAYNNNNRTG	3 cut(s)	998, 2469, 3279
SaqAI	TTAA	8 cut(s)	354, 458, 522, 900, 1151, 1302, 1805, 2166
SatI	GCNGC	6 cut(s)	640, 669, 1449, 1482, 2460, 2778
Sau96I	GGNCC	2 cut(s)	2237, 2287
ScaI	AGTACT	1 cut(s)	845
SchI	GAGTC	6 cut(s)	83, 493, 875, 1430, 1975, 3404
ScrFI	CCNGG	3 cut(s)	1790, 3344, 3417
SfcI	CTRYAG	1 cut(s)	3360
Sfr274I	CTCGAG	1 cut(s)	1601
SfuI	TTCGAA	2 cut(s)	1091, 3386
SinI	GGWCC	1 cut(s)	2287
SlaI	CTCGAG	1 cut(s)	1601
SmiMI	CAYNNNNRTG	3 cut(s)	998, 2469, 3279
SmlI	CTYRAG	2 cut(s)	1601, 2201
SmoI	CTYRAG	2 cut(s)	1601, 2201
SnaBI	TACGTA	1 cut(s)	1778
SphI	GCATGC	1 cut(s)	2061
SsiI	CCGC	5 cut(s)	34, 377, 668, 1327, 2572
SspMI	CTAG	4 cut(s)	1083, 1989, 2514, 2907
StyD4I	CCNGG	3 cut(s)	1788, 3342, 3415
StyI	CCWWGG	6 cut(s)	124, 317, 696, 2283, 2566, 3220
TaaI	ACNGT	8 cut(s)	561, 914, 1402, 1613, 2088, 2998, 3023, 3101
TaiI	ACGT	5 cut(s)	1442, 1692, 1780, 2161, 2858
TaqI	TCGA	9 cut(s)	962, 996, 1091, 1537, 1602, 2350, 3116, 3386, 3408
TauI	GCSGC	1 cut(s)	671
TfiI	GAWTC	8 cut(s)	129, 937, 1313, 1463, 1541, 1588, 2623, 3425
Tru1I	TTAA	8 cut(s)	354, 458, 522, 900, 1151, 1302, 1805, 2166
Tru9I	TTAA	8 cut(s)	354, 458, 522, 900, 1151, 1302, 1805, 2166
TseFI	GTSAC	4 cut(s)	2138, 2377, 2706, 2902
TseI	GCWGC	5 cut(s)	639, 1448, 1481, 2459, 2777
Tsp45I	GTSAC	4 cut(s)	2138, 2377, 2706, 2902
VpaK11BI	GGWCC	1 cut(s)	2287
XapI	RAATTY	9 cut(s)	28, 39, 436, 518, 1007, 1093, 1370, 1838, 2314
XceI	RCATGY	1 cut(s)	2061
XhoI	CTCGAG	1 cut(s)	1601
XmiI	GTMKAC	1 cut(s)	247
XmnI	GAANNNNTTC	2 cut(s)	312, 2087
XspI	CTAG	4 cut(s)	1083, 1989, 2514, 2907
ZrmI	AGTACT	1 cut(s)	845
Zsp2I	ATGCAT	1 cut(s)	2059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.