FvH4_5g05640

Protein MODIFIER OF SNC1

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
3314189 .. 3322877
8689 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05640.t5

Sequence Viewer

Length: 4665 bp
ATGACGTCGAGTATGTTGTCTGGGGATCGGAGGTGGGCTTCTTCCAGAAGAGGTGCAATGACTGTTTTAGGAAAAGTTCCGAAGCCTGTAAACTTACCCAGTCAAAGGTTAGAAAATCATGGTATGGATCCATCTGTGGAAATTGTTCCCAAGGGTACTCTCAGTTGGGGCAGTAGATCATCATCTGCATCAAATGCATGGGGTACCTCATCAGTTTCTCCAAATACTGGTGGTGGCACCACTTCACCAAGCTTTCTCAGTGGCCACATTTCATCAGAAAGTGGCACTCGACCATCAACTGCTGGTAGTGATAAATCTCATGAACCTACTTCCAACGCATGGGGTCCAAACTCTAGGCCATCATCGGCCTCTGGGGTATTGACATCAAATCAGACGTCCCTGGCATCATTGCGCCCTCGCAGTGCAGAGCCGAGGCCTGGGAGTTCACAGTTGTCAAGATTTGCTGAGCACTCTGAACATCCAGTGGCATGGAGTGCTCCTGGGACTGCAGAAAAATTGGGAGTAGTGACGTCATCAAAGAAAGAAGGGTTTTCTCTAACTTCTGGAGACTTTCCAACACTTGGTTCAGAAAAGGATAATTCTGGAAAGAATGCAGATTCAGAAGATCGCAGTTCTTACTCTCGCCCCGGCTCATCTTCTGGTGGTGGAGTGGCAAAAGAGACTACTGGGATTTCTGTAGTTGGTGATATTTCTGCAAATGCAAGTGTGAAGAGTGGAACTGGTAATTCATGGAAAAGAGAGAGTCCGTACAATGAAGAAGGTAGACCTGGGATGGAGAAGTGGCAAGGGAATCCCCAGCCTTACCCTGGTGCTTGCGTCCCTCCCCAACATTATGATGCATGGCATGGTGGTCCTGTTCACCCGCAAGGTGGTCCAGTACCTCACCCCCAAGGTGGTGTTTGGTTTAGAGGTCCTCCAGGGGGTCCTCCTTTTGGGGCTCAGGTCCCTCCTGGTGGCTTCCCGATGGAACCATTTCCATATTATCCTCCACAAATTCCAGCTGGTGCTCTTGCCAACTCACAGCCTGTTCCTCCAACTGGAGCGGGACCAAGGGGACACCATCCTAAAAATGGAGAGATGTACAGACCTCATATGCCAGAGGCGTATATCCGCCCTGGTATGCCAATTAGACCTGGATTTTACCCGGGTCCTGTGCCCTTCGAGGGATATTATGGTTCACCAATGGGATATTGCAATTCAAATGAACGAGATCTCCCATTCGTGGGAATGCCGGCTGGGCCTCCTGTCTATAACAGGTACCCTAGCCAAAGTGCTCCCGAGTCTGGCAGACCTAGTGGATATGGTCCCACCAACCAAACAGGGTTACCGGAGAAAATAGAATCTGGTCATCCACATGATACACGTGGACCATACAAAGTTCTTCTAAAGCAGCATGATGGTTGGGATAGAAGAAATGAAGAACAAAGAAGTGAGGATGCTGTAACAACCAATGCGTCATGTCTTGAGAACGAGGACCAACCACGAGCACTGTCATCAGAGAATGATTGGAGATCAGATCGTAGAAAGGAGGGAGAGAGGGAACGAAGGAGTGAAAGACCTACTTCACAGAGTTCAGACAGAGGAGCTTCTTCTGCTCATGTCAAAGTCAAGTCCCCTGAAAGTTTGGGTAATATGAGGGCAGCTGATACCTTTCCAGTGAAGAAAATGGAAACTGAAGCCTGTGGCACACAAGATATTGCACAAACACTCTCCGCAAAAGAATCCAGTTTGATTCAGAAAATAGAGGGATTAAATGCCAAAGCACGAGTTTCTGATGGACGAGGTGATACTGCATCTGTTTCCAGTAGGGAGGACCAAAGGAAGACATTCCAAGTCAACCCTAAATCTAACAGTTCAGTAAATGAACCTGGTAGTGGCTCGGGCACTGAAATCATAAATTCCTCTCATGAAGTCAGTAGTGGAATTTCTGTCTCCAGGCGACCTACCCATGGCGTGCATGGTAAATCAGATAATCGTGGTAGAGGAAGGTTTAATAACCAAGAAGGCGACGGCTGGGGGAAGAAATCCTTGGTTTCTGAACCAACATCTGTGGTGTCAACTGCAAATGTAAAAGTTCATTCTAATGATCGTGTGCATGACAACATTGCATCCATGGAAGCTATAGAAAAGCCTGGATCTTATCCACAAGCCAGACTTGAAGACGACTCATTGACACCAATGGCTGATCCAAATGATTCTGAGGCACAGCGTGCTAAGATGAGGGAGCTAGCTAAGCAGCGTACAAGACAGCTTCAGGAGGAAGAAGAGGAGCGGACAAGAAGGCAGATGGCCAAGGCTCGGGCAAAATTGGAAGAGTTGAACAGGCGTACCAAAGTGGTGGAAGGTTCAAATCAAAAGTCTGAAAATTCCTCCAGTGGAGATGTCCAGATTAAAAAAGAAGAATCTAAAACTTCTGGTGAACAACTAGTGGCTGTTAGGGAATATGATTCGCAAGTCCCAGCGTTGGGTTCTAACCTCAACGCTGTTGCACAGATTAGTGAGAGCACCAGTGTTAAAGTTGAAAAATCAACTGTTCCATCAACTGAGTTACCTCCGGAGAGACCAAAGAGTGCCTACAAGGAACCCATTTTCATGCATGATCAACCTGTGCCTTTGCAGCAGCAGGTCACTGTTGCTAATGCTGCTCATCAGAACACTACTCCTCAGGCTCATGATAGCAGTATCTCAAGGCAGAAGCAGACACCTAAACAAAAGCAGAACACTCAGTTGGAAAAGAAGTCTACTGGGAAGAATACTTCAACTAGTATAACTGACACACCAACTAGTCAGACAGATGCAGTGGTTAATGTGTCCTCATCTGGTGGAGTTGGAGCTACTTCAACTGCTTTGAGTACGGAGTCGAGCCTGGCTACAGATTCTAGTGTGATTCTCGAGTCATCCTCTCATCCAAGAAAGAGAAGTAGCAGAAGTGGCAAGAACAAGCAGAGAGCAGAGATTTCAGCATTTGTGGCTGGTATACCATCATCCATATCAAATGATACAAATCATGCAAACACCAATATAGAAAGTGGAAAACCAAATGCATCTAAGGGGGATTTAGATCCTATCTCAGTTCAGTCCCAGGCCCTTTCTAGGGATGCACATCAGTCGACGGAGCAGAACTCGTCTTTACCAAATGAAGAATCTCAAGGTAAACTAAGTGGCCATTGGAAACCTCAGCATTCTCGCCGAATGCCTAGGAATTCACAAGCTGTCAGGCACTCGGAAAATGCTGTTATCTGGGCACCAGTGCGGTCACAGAACAAAACTGATGTAACTGATGATACCAACCCCAAAACTGAAGCTGAGGGTGTCAGTGCTGTAAAGAGCGACCAGCAAGTGCAAAATAATTCAAGAAATAAGAGGGCGGAGATGGAGAGATATGTACCAAAACCTGTAGCTAAAGAGATGGCACATCAAGGAAGCACTCAACCAGGGATTTCTGTAGTGCATCAGACTGCAATAAATGAGAACAAAAGGGGAACAGATTCTGGTCCTCAAGGTCCCGAAAATTCTCAACCTAGTGCTGCAGCCGTTGGAAAAACAGGTTTAGCCATAGAATCCAGGACTGTGAGTAACAGGCTAAATAAGCAGGGAAAAGCACATGGGTCGTGGCGACAACGGGGATCAACAGAACCAACCAACATTCAAGGTTTCCAAGATGTACCATCATACACTTCAAATGTTGGTCAGAGTGATCTTGGCTCAATGACAGAGCAACCAAAGAATTCTGGTGAATGGAATGATGGATGGAACATGCCGGAAGAACCCAACACCGTTGTACCAGTCTCTGCATCTATTGTTGTTAAAGAACAGGGAATACCCGGAAGACGAAAGCAACATCCATTTAAGGGTCAAAAAACTATGGCAAATAATCATGATCATGAGCAAAAGAAAAACGATAGGGGGGATGCTGACAGAATCTACAGAAAATCTCCAACCTCTGAAATGAGTCGATCAGACTTACCCTCTGCTTCCAAAGAGAATCAAGCTTTCGGGGAACGTGCAATGCCTCATTGGCAGCCCAAATCTCAGGCATTTGCAGCCAATAATCATCAGGGGAACAGGGCTAATGGTCCCCAAGGTGCAGACCCACTCTCATCAACACCTAACAAAGATACCACTGAAAATGTGGCTCAGCATCGACATGATCAATACAAGTCTGAAAGAAACCATGCAGGGGAAGGACAGAACAGGACAGAGAGGAAAACAACACACAGGGGACGTCCGAGCTCCCCACACCATGGTCCTGTAAGCCCTGTCGAACTGGCTCCTCCCAGTATGGATGCTAGACAAGAGCATCAGTTTCAAACAGGATTTCGCAGGAATGGAAACCAAAACAACCGTTTCAGCAGAGGTCAAGAGTCTCGTGGGGATTGGAATTACTCGGGGCATGATACTAGGCAGCAAAACCCCCCTGCAAATCGGGACAGGCAGAGGCACAGTGCCCATTTGGAGTACCAGCCAGTTGGGCCATACAACAGCAGTGACAAATATAACAATTCCGAGGGACCTAGAGATGGTTCTCAGAACTCAGGTGGTGGGAGGGTCAAGGAAAGAGGGCAGGGTCATTCGAGACGTGATGGGGGTAACTTTCATGGACGGCAGAGTGGCACTGTTCGAGTAGTGCAGGATATGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1555

Amino Acids

168.27

Weight (kDa)

9.3

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 4 cut(s) 8, 398, 533, 4249
Acc36I ACCTGC 1 cut(s) 2635
Acc65I GGTACC 2 cut(s) 203, 1278
AccB1I GGYRCC 4 cut(s) 203, 236, 1278, 3265
AccB7I CCANNNNNTGG 4 cut(s) 227, 339, 581, 4265
AccBSI CCGCTC 2 cut(s) 1064, 2293
AccI GTMKAC 4 cut(s) 784, 2762, 2998, 3131
AccIII TCCGGA 1 cut(s) 2575
AciI CCGC 7 cut(s) 884, 1064, 1132, 1734, 2293, 3274, 3389
AclWI GGATC 7 cut(s) 33, 122, 135, 2164, 2201, 3077, 3655
AcoI YGGCCR 3 cut(s) 262, 2310, 3184
AcsI RAATTY 7 cut(s) 1014, 1918, 1944, 2386, 3223, 3532, 3748
AcuI CTGAAG 3 cut(s) 1716, 2258, 3342
AcvI CACGTG 1 cut(s) 1385
AcyI GRCGYC 4 cut(s) 5, 395, 530, 4246
AdeI CACNNNGTG 1 cut(s) 2231
AflIII ACRYGT 1 cut(s) 1382
AhlI ACTAGT 3 cut(s) 2446, 2783, 2804
AjiI CACGTC 1 cut(s) 4601
AjuI GAANNNNNNNTTGG 6 cut(s) 568, 600, 2033, 2065, 2732, 2764
AloI GAACNNNNNNTCC 2 cut(s) 1218, 1250
Alw21I GWGCWC 7 cut(s) 471, 499, 1030, 1297, 1510, 2528, 4256
Alw26I GTCTC 7 cut(s) 561, 674, 1957, 2575, 3814, 4392, 4591
AlwI GGATC 7 cut(s) 33, 122, 135, 2164, 2201, 3077, 3655
AlwNI CAGNNNCTG 2 cut(s) 3512, 3812
Ama87I CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
Aor13HI TCCGGA 1 cut(s) 2575
AoxI GGCC 9 cut(s) 262, 356, 366, 434, 1259, 2310, 3105, 3184, 4493
ApoI RAATTY 7 cut(s) 1014, 1918, 1944, 2386, 3223, 3532, 3748
ArsI GACNNNNNNTTYG 4 cut(s) 380, 412, 2363, 2395
Asp700I GAANNNNTTC 4 cut(s) 144, 993, 1847, 3508
Asp718I GGTACC 2 cut(s) 203, 1278
AspA2I CCTAGG 1 cut(s) 3218
AspLEI GCGC 1 cut(s) 414
AsuC2I CCSGG 4 cut(s) 648, 1166, 1167, 3846
AsuHPI GGTGA 8 cut(s) 237, 716, 872, 896, 1191, 1817, 2450, 3767
AsuNHI GCTAGC 1 cut(s) 2248
AvaI CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
AvrII CCTAGG 1 cut(s) 3218
AxyI CCTNAGG 1 cut(s) 2685
BaeGI GKGCMC 4 cut(s) 1179, 1907, 3268, 4471
BaeI ACNNNNGTAYC 4 cut(s) 2332, 2365, 3786, 3819
BalI TGGCCA 3 cut(s) 264, 2312, 3186
BamHI GGATCC 1 cut(s) 127
BanI GGYRCC 4 cut(s) 203, 236, 1278, 3265
BanII GRGCYC 2 cut(s) 961, 4256
BauI CACGAG 3 cut(s) 1503, 1785, 4389
BbrPI CACGTG 1 cut(s) 1385
BbsI GAAGAC 3 cut(s) 1850, 2187, 3856
Bbv12I GWGCWC 7 cut(s) 471, 499, 1030, 1297, 1510, 2528, 4256
BbvCI CCTCAGC 2 cut(s) 3198, 3327
BceAI ACGGC 3 cut(s) 2047, 3539, 4640
BcgI CGANNNNNNTGC 4 cut(s) 3111, 3145, 3612, 3646
BclI TGATCA 3 cut(s) 2620, 3901, 4171
BcnI CCSGG 4 cut(s) 648, 1166, 1167, 3846
BcoDI GTCTC 7 cut(s) 561, 674, 1957, 2575, 3814, 4392, 4591
BcuI ACTAGT 3 cut(s) 2446, 2783, 2804
BfmI CTRYAG 8 cut(s) 507, 696, 2142, 2892, 3417, 3465, 3549, 3946
BfuAI ACCTGC 1 cut(s) 2635
BglI GCCNNNNNGGC 3 cut(s) 1258, 4039, 4492
BglII AGATCT 1 cut(s) 1231
BlnI CCTAGG 1 cut(s) 3218
BlpI GCTNAGC 3 cut(s) 465, 2253, 4158
BmeT110I CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
BmgBI CACGTC 1 cut(s) 4601
BmrI ACTGGG 4 cut(s) 93, 696, 2775, 4293
BmtI GCTAGC 1 cut(s) 2252
BmuI ACTGGG 4 cut(s) 93, 696, 2775, 4293
BpiI GAAGAC 3 cut(s) 1850, 2187, 3856
BplI GAGNNNNNCTC 4 cut(s) 2906, 2938, 3128, 3160
BpmI CTGGAG 5 cut(s) 585, 921, 1080, 1939, 2377
Bpu10I CCTNAGC 3 cut(s) 960, 3198, 3327
Bpu1102I GCTNAGC 3 cut(s) 465, 2253, 4158
BpuEI CTTGAG 4 cut(s) 1505, 2692, 3153, 3504
BpuMI CCSGG 4 cut(s) 648, 1166, 1167, 3846
BsaAI YACGTR 1 cut(s) 1385
BsaBI GATNNNNATC 4 cut(s) 181, 3024, 3081, 3123
BsaHI GRCGYC 4 cut(s) 5, 395, 530, 4246
BsaI GGTCTC 1 cut(s) 2575
BsaWI WCCGGW 2 cut(s) 1348, 2575
BsaXI ACNNNNNCTCC 2 cut(s) 1218, 1248
Bse118I RCCGGY 1 cut(s) 1252
Bse21I CCTNAGG 1 cut(s) 2685
Bse3DI GCAATG 4 cut(s) 63, 407, 2124, 4035
Bse8I GATNNNNATC 4 cut(s) 181, 3024, 3081, 3123
BseAI TCCGGA 1 cut(s) 2575
BseJI GATNNNNATC 4 cut(s) 181, 3024, 3081, 3123
BseMI GCAATG 4 cut(s) 63, 407, 2124, 4035
BseRI GAGGAG 4 cut(s) 1617, 2303, 2673, 4284
BseSI GKGCMC 4 cut(s) 1179, 1907, 3268, 4471
BseYI CCCAGC 4 cut(s) 816, 1256, 2034, 2479
BsgI GTGCAG 2 cut(s) 444, 4128
BshFI GGCC 9 cut(s) 264, 358, 368, 436, 1261, 2312, 3107, 3186, 4495
BshNI GGYRCC 4 cut(s) 203, 236, 1278, 3265
BsiHKAI GWGCWC 7 cut(s) 471, 499, 1030, 1297, 1510, 2528, 4256
BsiHKCI CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
BsiSI CCGG 7 cut(s) 648, 1166, 1253, 1349, 2576, 3782, 3846
BsmAI GTCTC 7 cut(s) 561, 674, 1957, 2575, 3814, 4392, 4591
BsmBI CGTCTC 1 cut(s) 4591
BsmI GAATGC 4 cut(s) 616, 1254, 3202, 3219
BsnI GGCC 9 cut(s) 264, 358, 368, 436, 1261, 2312, 3107, 3186, 4495
Bso31I GGTCTC 1 cut(s) 2575
BsoBI CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
Bsp13I TCCGGA 1 cut(s) 2575
Bsp1407I TGTACA 1 cut(s) 1101
Bsp1720I GCTNAGC 3 cut(s) 465, 2253, 4158
Bsp19I CCATGG 3 cut(s) 1969, 2133, 4264
BspACI CCGC 7 cut(s) 884, 1064, 1132, 1734, 2293, 3274, 3389
BspANI GGCC 9 cut(s) 264, 358, 368, 436, 1261, 2312, 3107, 3186, 4495
BspEI TCCGGA 1 cut(s) 2575
BspHI TCATGA 5 cut(s) 319, 1927, 2692, 3898, 3904
BspMAI CTGCAG 2 cut(s) 511, 3553
BspMI ACCTGC 1 cut(s) 2635
BspOI GCTAGC 1 cut(s) 2252
BspPI GGATC 7 cut(s) 33, 122, 135, 2164, 2201, 3077, 3655
BspT107I GGYRCC 4 cut(s) 203, 236, 1278, 3265
BspTNI GGTCTC 1 cut(s) 2575
BsrBI CCGCTC 2 cut(s) 1064, 2293
BsrDI GCAATG 4 cut(s) 63, 407, 2124, 4035
BsrFI RCCGGY 1 cut(s) 1252
BsrGI TGTACA 1 cut(s) 1101
BssAI RCCGGY 1 cut(s) 1252
BssNAI GTATAC 1 cut(s) 2999
BssNI GRCGYC 4 cut(s) 5, 395, 530, 4246
BssSI CACGAG 3 cut(s) 1503, 1785, 4389
Bst1107I GTATAC 1 cut(s) 2999
Bst2BI CACGAG 3 cut(s) 1503, 1785, 4389
Bst6I CTCTTC 4 cut(s) 43, 725, 2280, 2328
BstACI GRCGYC 4 cut(s) 5, 395, 530, 4246
BstAPI GCANNNNNTGC 3 cut(s) 194, 494, 2231
BstAUI TGTACA 1 cut(s) 1101
BstBAI YACGTR 1 cut(s) 1385
BstC8I GCNNGC 5 cut(s) 835, 1254, 1976, 2232, 2250
BstDSI CCRYGG 3 cut(s) 1969, 2133, 4264
BstEII GGTNACC 1 cut(s) 1344
BstHHI GCGC 1 cut(s) 414
BstMAI GTCTC 7 cut(s) 561, 674, 1957, 2575, 3814, 4392, 4591
BstNSI RCATGY 1 cut(s) 3781
BstPI GGTNACC 1 cut(s) 1344
BstSFI CTRYAG 8 cut(s) 507, 696, 2142, 2892, 3417, 3465, 3549, 3946
BstSLI GKGCMC 4 cut(s) 1179, 1907, 3268, 4471
BstV2I GAAGAC 3 cut(s) 1850, 2187, 3856
BstX2I RGATCY 4 cut(s) 127, 1231, 2156, 3082
BstXI CCANNNNNNTGG 3 cut(s) 489, 2359, 4490
BstYI RGATCY 4 cut(s) 127, 1231, 2156, 3082
BstZ17I GTATAC 1 cut(s) 2999
Bsu36I CCTNAGG 1 cut(s) 2685
BsuRI GGCC 9 cut(s) 264, 358, 368, 436, 1261, 2312, 3107, 3186, 4495
BtgI CCRYGG 3 cut(s) 1969, 2133, 4264
BtrI CACGTC 1 cut(s) 4601
BtsI GCAGTG 3 cut(s) 427, 2826, 4513
BveI ACCTGC 1 cut(s) 2635
Cac8I GCNNGC 5 cut(s) 835, 1254, 1976, 2232, 2250
CaiI CAGNNNCTG 2 cut(s) 3512, 3812
CciI TCATGA 5 cut(s) 319, 1927, 2692, 3898, 3904
CfoI GCGC 1 cut(s) 414
Cfr10I RCCGGY 1 cut(s) 1252
Cfr9I CCCGGG 1 cut(s) 1165
CseI GACGC 2 cut(s) 826, 1464
CsiI ACCWGGT 1 cut(s) 1888
CspCI CAANNNNNGTGG 2 cut(s) 2052, 2087
DraIII CACNNNGTG 1 cut(s) 2231
EaeI YGGCCR 3 cut(s) 262, 2310, 3184
Eam1104I CTCTTC 4 cut(s) 43, 725, 2280, 2328
EarI CTCTTC 4 cut(s) 43, 725, 2280, 2328
EciI GGCGGA 2 cut(s) 1121, 3404
Ecl136II GAGCTC 1 cut(s) 4254
Eco147I AGGCCT 1 cut(s) 436
Eco24I GRGCYC 2 cut(s) 961, 4256
Eco31I GGTCTC 1 cut(s) 2575
Eco53kI GAGCTC 1 cut(s) 4254
Eco57I CTGAAG 3 cut(s) 1716, 2258, 3342
Eco72I CACGTG 1 cut(s) 1385
Eco81I CCTNAGG 1 cut(s) 2685
Eco88I CYCGRG 6 cut(s) 1165, 1298, 1900, 2319, 2912, 4408
Eco91I GGTNACC 1 cut(s) 1344
EcoICRI GAGCTC 1 cut(s) 4254
EcoO109I RGGNCCY 7 cut(s) 932, 944, 964, 1169, 3106, 3524, 4532
EcoO65I GGTNACC 1 cut(s) 1344
EcoRI GAATTC 2 cut(s) 3223, 3748
EcoT22I ATGCAT 4 cut(s) 199, 862, 2619, 3067
EcoT38I GRGCYC 2 cut(s) 961, 4256
Esp3I CGTCTC 1 cut(s) 4591
FalI AAGNNNNNCTT 6 cut(s) 1567, 1599, 2033, 2065, 2160, 2192
FauI CCCGC 2 cut(s) 891, 1057
FauNDI CATATG 1 cut(s) 1113
FbaI TGATCA 3 cut(s) 2620, 3901, 4171
FblI GTMKAC 4 cut(s) 784, 2762, 2998, 3131
FriOI GRGCYC 2 cut(s) 961, 4256
GlaI GCGC 1 cut(s) 413
GsaI CCCAGC 4 cut(s) 820, 1260, 2038, 2483
GsuI CTGGAG 5 cut(s) 585, 921, 1080, 1939, 2377
HaeIII GGCC 9 cut(s) 264, 358, 368, 436, 1261, 2312, 3107, 3186, 4495
HapII CCGG 7 cut(s) 648, 1166, 1253, 1349, 2576, 3782, 3846
HgaI GACGC 2 cut(s) 826, 1464
HhaI GCGC 1 cut(s) 414
Hin1I GRCGYC 4 cut(s) 5, 395, 530, 4246
Hin6I GCGC 1 cut(s) 412
HinP1I GCGC 1 cut(s) 412
HincII GTYRAC 3 cut(s) 1858, 2079, 3132
HindII GTYRAC 3 cut(s) 1858, 2079, 3132
HindIII AAGCTT 2 cut(s) 250, 4011
HpaII CCGG 7 cut(s) 648, 1166, 1253, 1349, 2576, 3782, 3846
HphI GGTGA 8 cut(s) 237, 716, 872, 896, 1191, 1817, 2450, 3767
Hpy99I CGWCG 3 cut(s) 10, 2033, 3136
HpyAV CCTTC 9 cut(s) 539, 773, 1189, 1560, 2001, 2018, 2295, 2357, 4199
HpyCH4IV ACGT 7 cut(s) 5, 395, 530, 1384, 4024, 4246, 4600
HpySE526I ACGT 7 cut(s) 5, 395, 530, 1384, 4024, 4246, 4600
Hsp92I GRCGYC 4 cut(s) 5, 395, 530, 4246
HspAI GCGC 1 cut(s) 412
Kpn2I TCCGGA 1 cut(s) 2575
KpnI GGTACC 2 cut(s) 207, 1282
KroI GCCGGC 1 cut(s) 1252
KroNI GCCGGC 1 cut(s) 1254
Ksp22I TGATCA 3 cut(s) 2620, 3901, 4171
MabI ACCWGGT 1 cut(s) 1888
MaeII ACGT 7 cut(s) 5, 395, 530, 1384, 4024, 4246, 4600
MbiI CCGCTC 2 cut(s) 1064, 2293
MflI RGATCY 4 cut(s) 127, 1231, 2156, 3082
MlsI TGGCCA 3 cut(s) 264, 2312, 3186
MluNI TGGCCA 3 cut(s) 264, 2312, 3186
MlyI GAGTC 7 cut(s) 772, 1310, 2180, 2888, 2924, 3982, 4394
MmeI TCCRAC 7 cut(s) 357, 599, 1079, 2730, 2830, 3538, 3983
Mox20I TGGCCA 3 cut(s) 264, 2312, 3186
Mph1103I ATGCAT 4 cut(s) 199, 862, 2619, 3067
MroI TCCGGA 1 cut(s) 2575
MroNI GCCGGC 1 cut(s) 1252
MroXI GAANNNNTTC 4 cut(s) 144, 993, 1847, 3508
MscI TGGCCA 3 cut(s) 264, 2312, 3186
MseI TTAA 7 cut(s) 1772, 2013, 2412, 2535, 2826, 3828, 3870
MslI CAYNNNNRTG 6 cut(s) 855, 1374, 2103, 2612, 3903, 4167
Msp20I TGGCCA 3 cut(s) 264, 2312, 3186
MspA1I CMGCKG 2 cut(s) 1022, 1664
MspI CCGG 7 cut(s) 648, 1166, 1253, 1349, 2576, 3782, 3846
Mva1269I GAATGC 4 cut(s) 616, 1254, 3202, 3219
NaeI GCCGGC 1 cut(s) 1254
NciI CCSGG 4 cut(s) 648, 1166, 1167, 3846
NcoI CCATGG 3 cut(s) 1969, 2133, 4264
NdeI CATATG 1 cut(s) 1113
NgoMIV GCCGGC 1 cut(s) 1252
NheI GCTAGC 1 cut(s) 2248
NmeAIII GCCGAG 1 cut(s) 456
NmuCI GTSAC 4 cut(s) 526, 2647, 3276, 4508
NsiI ATGCAT 4 cut(s) 199, 862, 2619, 3067
NspI RCATGY 1 cut(s) 3781
PaeR7I CTCGAG 1 cut(s) 2912
PagI TCATGA 5 cut(s) 319, 1927, 2692, 3898, 3904
PceI AGGCCT 1 cut(s) 436
PctI GAATGC 4 cut(s) 616, 1254, 3202, 3219
PdiI GCCGGC 1 cut(s) 1254
PdmI GAANNNNTTC 4 cut(s) 144, 993, 1847, 3508
PflMI CCANNNNNTGG 4 cut(s) 227, 339, 581, 4265
PfoI TCCNGGA 1 cut(s) 3584
PleI GAGTC 7 cut(s) 771, 1309, 2180, 2887, 2923, 3981, 4393
PmaCI CACGTG 1 cut(s) 1385
PmlI CACGTG 1 cut(s) 1385
PpsI GAGTC 7 cut(s) 771, 1309, 2180, 2887, 2923, 3981, 4393
Ppu21I YACGTR 1 cut(s) 1385
PpuMI RGGWCCY 6 cut(s) 932, 944, 964, 1169, 3524, 4532
Psp124BI GAGCTC 1 cut(s) 4256
Psp5II RGGWCCY 6 cut(s) 932, 944, 964, 1169, 3524, 4532
PspCI CACGTG 1 cut(s) 1385
PspEI GGTNACC 1 cut(s) 1344
PspFI CCCAGC 4 cut(s) 816, 1256, 2034, 2479
PspPPI RGGWCCY 6 cut(s) 932, 944, 964, 1169, 3524, 4532
PsrI GAACNNNNNNTAC 2 cut(s) 3825, 3857
PstI CTGCAG 2 cut(s) 511, 3553
PstNI CAGNNNCTG 2 cut(s) 3512, 3812
PsuI RGATCY 4 cut(s) 127, 1231, 2156, 3082
PvuII CAGCTG 2 cut(s) 1022, 1664
RseI CAYNNNNRTG 6 cut(s) 855, 1374, 2103, 2612, 3903, 4167
SacI GAGCTC 1 cut(s) 4256
SalI GTCGAC 1 cut(s) 3130
SaqAI TTAA 7 cut(s) 1772, 2013, 2412, 2535, 2826, 3828, 3870
SchI GAGTC 7 cut(s) 772, 1310, 2180, 2888, 2924, 3982, 4394
SexAI ACCWGGT 1 cut(s) 1888
SfcI CTRYAG 8 cut(s) 507, 696, 2142, 2892, 3417, 3465, 3549, 3946
Sfr274I CTCGAG 1 cut(s) 2912
SlaI CTCGAG 1 cut(s) 2912
SmaI CCCGGG 1 cut(s) 1167
SmiMI CAYNNNNRTG 6 cut(s) 855, 1374, 2103, 2612, 3903, 4167
SmlI CTYRAG 5 cut(s) 1484, 2707, 2912, 3168, 3519
SmoI CTYRAG 5 cut(s) 1484, 2707, 2912, 3168, 3519
SpeI ACTAGT 3 cut(s) 2446, 2783, 2804
SseBI AGGCCT 1 cut(s) 436
SsiI CCGC 7 cut(s) 884, 1064, 1132, 1734, 2293, 3274, 3389
SstI GAGCTC 1 cut(s) 4256
StuI AGGCCT 1 cut(s) 436
TaiI ACGT 7 cut(s) 8, 398, 533, 1387, 4027, 4249, 4603
TatI WGTACW 1 cut(s) 1101
Tru1I TTAA 7 cut(s) 1772, 2013, 2412, 2535, 2826, 3828, 3870
Tru9I TTAA 7 cut(s) 1772, 2013, 2412, 2535, 2826, 3828, 3870
TseFI GTSAC 4 cut(s) 526, 2647, 3276, 4508
Tsp45I GTSAC 4 cut(s) 526, 2647, 3276, 4508
TspGWI ACGGA 3 cut(s) 756, 2891, 3149
TspMI CCCGGG 1 cut(s) 1165
Van91I CCANNNNNTGG 4 cut(s) 227, 339, 581, 4265
XapI RAATTY 7 cut(s) 1014, 1918, 1944, 2386, 3223, 3532, 3748
XceI RCATGY 1 cut(s) 3781
XcmI CCANNNNNNNNNTGG 4 cut(s) 824, 1088, 1976, 4150
XhoI CTCGAG 1 cut(s) 2912
XmaI CCCGGG 1 cut(s) 1165
XmaJI CCTAGG 1 cut(s) 3218
XmiI GTMKAC 4 cut(s) 784, 2762, 2998, 3131
XmnI GAANNNNTTC 4 cut(s) 144, 993, 1847, 3508
ZraI GACGTC 4 cut(s) 6, 396, 531, 4247
Zsp2I ATGCAT 4 cut(s) 199, 862, 2619, 3067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.