RchiOBHm_Chr7g0193171

Protein MODIFIER OF SNC1

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
11570284 .. 11578888
8605 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17272

Sequence Viewer

Length: 4680 bp
ATGACGTCGAGTATGTTGTCTGGGGATCGGAGGTGGGCTTCTGCCAGAAGAGGTGCAATGACTGTTTTAGGGAAAGTCCCGAAGCCTATAAATTTACCCAGTCAGAGGTTAGAAAATCATGGTATGGATCCATCTGTGGAAATTGTTCCCAAGGGCACTCTCAGTTGGGGCAGTAGATCATCATCTGCATCAAATGCATGGGGTACCTCATCACTTTCTCCAAATACTGATGGTGGCACCACTTCACCAAGTTATCTCAGTGGCCACATTTCTTCAGGAAGTGGCACTCGACCGTCAACTGCTGGTAGTGAAAAATCTCATGAACCTGCTGCTAGCGCGTGGGGTCCAAACTCTAGGCCATCATCGGCCTCTGGGGTATTGACATCAAATCAGACGTCACTGGCATCATTGCGCCCTCGCAGTGCAGAACCAAGGCCTGGTAGTTCACAGTTGTCAAGATTTGCTGAACACTCTGAACATCCAGTGGCATGGAATGCTCCTGGGACTGCAGAAAAATTGGGAGTGACGTCATCAAAGAATGAAGGGTTTTCTCTCACTTCTGGTGACTTTCCGACTCTTGGTTCAGAAAAGGATAATTCTGGAAAGAATGCTGAGTCTCAAGATCACAGTGCTTACTCTCGCCCTGGCTCATCTTCTGGTGGTGGAGTGGCAAAAGAGACAACTGGGACTTCTGTAGTTGGTGATATCTCTGTAAATGCAAGTGTGAAGAGTGGAACTGGTAATTCATGGAAAAGAGAGAATCCCTCATACAATGAAGATGGAGGTAGACCTGGTATGGAGAAGTGGCAGGGAAATCCCCAGCCTTACCCTGGTGCTAGTGTCCCGCCCCAACATTATGATGCATGGCATGGTGGTCCTGTTCACCCGCAAGGTGGTCCAGTACCTCACCCCCAAGGTGGGGTTTGGTTTAGAGGTCCTCCAGGGGGTCCTCCTTTTGGAGCCCAGGTCCCTCCTGGTGGCTTCCCAATGGAACCATTTCCATATTATCCTCCACAAATTCCAGCTGCTGCTCTTGCGAACCCACAGCCTGTTCCTCCAACTGGAGCAGGACCAAGGGGACACCATCCTAAAAATGGAGAGATGTACAGACCTCATATGCCAGAGGCATATATCCGCCCCGGTATGCCAATTAGACCTGGATTTTACCCTGGTCCTGTGGCCTTTGAGGGATATTATGGTTCACCAATGGGATATTGCAATTCAAATGAACGAGATGTCCCATTTGTGGGAATGCCAGCTGGTCCTCCCGTCTATAACAGGTACCCTAGCCAAAGTGCTCCTGAGCCTGGCAGACCTAGTGGATATGGTCCCACCAGCCAAACAGGGTTACCGGAGAAAATAGCATCTGGTCATCCACATGATACACGTGGACCATACAAAGTTCTTCTGAAGCAGCATGATGGTTGGGATAGAAGAAATGAAGAACAGAGAAGTGAGGTTGCTGTAACAACCAATGCGTCATGTCTTGAGAGTGAGGACCAACCAAGAGCATTGTCATTGGAGAATGATTGGAGATCAGATCGCAGAAAGGAGGGAGAGAGGGATCGAAGGAGTGAAAGACCTGCTTCGCAGAATTCTGACCGAGGAGCTTCTTCTGCTCGTGTCAAAGTCAAATCCCCTGAAAGTTTGGGTAATATGAGGGCAGCTGATGCCATTCCAGTGAAGAAATTGGAAACTGAAGCCTGTGGCACACAAGATATTGCACAAACACTCTCTGCAAAAGACCCCAGTCTGATTCAGAAAATAGAGGGATTAAATGCCAAAGCACGAGTTTCTGATGGACGAGGTGATACTGCATCTGTTTCCATTAGGGAGGAGCAAAGGAAGACATTCCAAGTCAACCCTAAATCTAACAGTTCAGTAAATGAAACAGGTAGTGGCTCGGCCACTGAAATCATAAATTCCTCTCATGAAGTCAGCAGTGGAATTTCTGTCTCCAGGGGACCTGCTCATGGCATGCATGGTAAATCAGATAATCGTGGTAGAGGAAGGTTTAATAACCAAGAAGGCGACGGCTGGGGGAAGAAATCCTTGGTCTCTGAACCAACATCTGTGGTGTCAACTGCAAATTCAAAAGTTCCTTCTAATGTTCATGTGCATGACCACCTTGCGTCCATGGAAGCTACTGAAAAGTCTGGATCTTATCCACAAGGCAGACGTGAAGACGACTCATTGACACCAATGTTTGATCCAAATGATTCTGAGGCACAGCGTGCTAAGATGAAGGAGCTAGCCAAGCAACGTACCAAACAGCTTCAGGAGGAAGAGGAGGAGCGGACAAGAAGGCAGATGGCGAAGGCTCGAGCAAAATTAGAAGAGTTGAACAGACGTACTCAAGTGGTGGACGGTTCAAATCAAAAGTTTGAAAATTCCTCCAGTGGTGATGTCCAGAGTAAACAAGAAGAATCTCAAACTTCTGGTGAACCATTAGTGGCCGGTAGGAAATATGATCCACAAGTCCCAGCTTTCGGTTCTAACCTCAATGCTGTTGAACAGATTAAAGAGTGCATCAGTGTTGAAGTTGCAGAATCAACTGTTCCATCAATTGAGCTACCTTCGGAGAGGCCAAAGAGTGCCTACAAGGAGGAGCCCATTTTCATGCATGATCAACCTGTGCCTTTGCAGCAGCAGGTTACTATTGCTAATACTGCTCATCACAACACTGCTTCCCAGGCTCATGATAACAGTATCTCAAGGCAGAAGCAGGCACCTAAACAAAAGCAGAACACTCGGTTGGAAAAGAAGTCTATTGGGAAGAATACTTCCACTAGTATGACTGACACACCAAATAGCCAGACAGATACAGTGGTTAATGTGTCCTCATCTGGTGGAGTTGGAGCTACTTCAACCGCATTGAGTACTGAGTCAAGCCTGACTGCAAATTCTGGTGGATCATCTTCTCATCCAAGAAAGAAAAATAACAGAAGTGGCAAGAACAAGCAGAGAGCAGAGAATTCATCATCTGTGGCTGCTATATCATCATCTATATCAAATGATACAAATCATGCAAACACCACTATAGAAACTGGAAAACCAAATGTACCTAATGTGGATTTAGATCCTAGCTCAGTTCAGTCACAGACCTTTTCTAGGGATGCATATCAGTCGATGGAGCAGCACTTGTCTCTACCAAACGAAGAATCTCAAGGTAGATTAAGTGGCCAGTGGAAACCTCAGCATTCTCGCCGGATGCCTAGGAATTCACAAGCAATCAGGCACTCGGAAAAATTTCAAAGCAGCGATGCTGTTATGTGGGCACCAGTGCGGTCACAGAACAAAACTGATGTAACTGATGATGCCACCCCCAAAACCGAAGCTGAGGCTGTCAGTGCTGTAAAGAGCGACCATCAAGTGCAAAATAATTCAAGAAATAAGAGGGCGGAAATGGAGAGATATGTTCCAAAGCCTGTAGCTAAAGAAATGGCACATCAAGGAAGCACTCAACAAGCAATGGTTTCTGTAGTGCATCAGACTGCAATAAATGAGAACATCAGGGGAGCAGATTCTGGTCCTCCTCAAGGTGTCGAAAATTCTCAACCTAGTGCTGCAGTGGGAAAAGCAGGTTTTGCCATAGAATCCAGGAATGGGAGTAGCAGGCAAAATAAGCAGGTAAAAGCACATGGGTCGTGGCGACAACGGGGATCAACAGAACCAACCAACACGCAAGGTTTCCATGAGGAACCATCATATACTTCAAATGTTGGTCAGAGTGATATTGTCTCAGTGACAGAGCAACCAAAGAATTCTGATGATTGGAATGATGGATGGAACATGCCGGATGAACCCAACACTGTTGTACCAGTCTCTGCATCTATTGCTGTAAAAGAACAGGGAATACCCGGAAGACGAAAGCAGCATCCATTTAAGGGACAAAAAACTGTGGCAAATAATCATGATCATGAGCAAAAGAAAAACTATAGGGGGGATGCTGACAGAATCTACACCAAATCTTCAGCCTCTGAAATGAGTCAAACAGAGTTACCTTCTGCTTCTAAAGAGAATCAAGCTGTTGGGGAACGTGCAATTCCTCATTGGCAGCCCAAATCTCAGGCATTTGCAGCCAATAATCATCGAGGAAACAGGGCTACTGGTCCCCAAGGTGCAGAGCCACTCTCACCAACAACTGACAAAGATACCACTGAACATCTGGCTCAGCATCGACATGATCAATACAAGTCTGAAAGAAACAATGCAGGGGAAGGACAGAACAGGAGGGAGAGGAAAACAACACACAAGGGACGTCCCGGCTCCCCAAGTCATGGTCCTGTCAGCCCAGTCGAACTGGCTCCTCCTAGTATGGATGCTAGACAAGAGCATCAGTTTCAAACGGGGTTTCGAAGGAATGGAAACCAAAACAACCGTTTCAGCAGAGGGCAAGAGTCTCGTGGGGATTGGAATTACTCGGGGCATGATGGTAGGCAGCAAAACCCCCCTGCAAATCGGGACAGGCAGAGGCACAGTTCCCATTTGGAGTACCAGCCAGTTGGGCCATACAACAGCAGTGACAAATTTAACAATTCCGAGGGACCTAGAGAAGGTGCTCAGAATTCAGGTGGTGGAAGGGTCAAGGAAAGAGTCCAGGGTCATTCGAAACGTAGTGGAGGGAATTTCCATGGGCGGCAAAGTGGCACTATTCGAGTAGTGCCGGATATGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1559

Amino Acids

168.67

Weight (kDa)

9.21

Isoelectric Point (pI)

56.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 4 cut(s) 8, 398, 530, 4264
Acc36I ACCTGC 6 cut(s) 334, 1591, 1975, 2641, 3572, 3619
Acc65I GGTACC 2 cut(s) 203, 1281
AccB1I GGYRCC 5 cut(s) 203, 236, 1281, 2728, 3277
AccB7I CCANNNNNTGG 2 cut(s) 437, 4280
AccBSI CCGCTC 1 cut(s) 2296
AccI GTMKAC 1 cut(s) 787
AccII CGCG 1 cut(s) 338
AciI CCGC 8 cut(s) 845, 887, 1135, 2296, 2871, 3286, 3401, 4639
AcoI YGGCCR 4 cut(s) 262, 1905, 2454, 3181
AcuI CTGAAG 5 cut(s) 258, 1430, 1719, 2261, 3957
AcvI CACGTG 1 cut(s) 1388
AcyI GRCGYC 4 cut(s) 5, 395, 527, 4261
AdeI CACNNNGTG 1 cut(s) 2234
AflIII ACRYGT 1 cut(s) 1385
AhlI ACTAGT 1 cut(s) 2789
AjiI CACGTC 1 cut(s) 2180
AjuI GAANNNNNNNTTGG 4 cut(s) 2036, 2068, 2738, 2770
AloI GAACNNNNNNTCC 2 cut(s) 1221, 1253
Alw21I GWGCWC 2 cut(s) 1300, 4564
Alw26I GTCTC 8 cut(s) 621, 671, 1960, 2062, 3150, 3745, 3829, 4407
AlwNI CAGNNNCTG 4 cut(s) 1028, 3527, 3827, 3980
Ama87I CYCGRG 2 cut(s) 2322, 4423
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
Asp700I GAANNNNTTC 4 cut(s) 144, 996, 1850, 3249
Asp718I GGTACC 2 cut(s) 203, 1281
AspA2I CCTAGG 1 cut(s) 3215
AspLEI GCGC 2 cut(s) 338, 414
AsuC2I CCSGG 3 cut(s) 1140, 3861, 4266
AsuII TTCGAA 2 cut(s) 4357, 4610
AsuNHI GCTAGC 2 cut(s) 332, 2251
AvaI CYCGRG 2 cut(s) 2322, 4423
AvrII CCTAGG 1 cut(s) 3215
BaeGI GKGCMC 2 cut(s) 158, 3280
BaeI ACNNNNGTAYC 4 cut(s) 2814, 2847, 3801, 3834
BalI TGGCCA 2 cut(s) 264, 3183
BamHI GGATCC 1 cut(s) 127
BanI GGYRCC 5 cut(s) 203, 236, 1281, 2728, 3277
BanII GRGCYC 2 cut(s) 964, 2613
BauI CACGAG 3 cut(s) 1620, 1788, 4404
BbrPI CACGTG 1 cut(s) 1388
BbsI GAAGAC 3 cut(s) 1853, 2190, 3871
Bbv12I GWGCWC 2 cut(s) 1300, 4564
BbvCI CCTCAGC 2 cut(s) 3195, 3339
BceAI ACGGC 1 cut(s) 2050
BcgI CGANNNNNNTGC 8 cut(s) 2732, 2766, 3108, 3142, 3627, 3661, 4385, 4419
BclI TGATCA 3 cut(s) 2626, 3916, 4186
BcnI CCSGG 3 cut(s) 1140, 3861, 4266
BcoDI GTCTC 8 cut(s) 621, 671, 1960, 2062, 3150, 3745, 3829, 4407
BcuI ACTAGT 1 cut(s) 2789
BfmI CTRYAG 7 cut(s) 507, 693, 3039, 3429, 3480, 3567, 3937
BfuAI ACCTGC 6 cut(s) 334, 1591, 1975, 2641, 3572, 3619
BglI GCCNNNNNGGC 1 cut(s) 4507
BlnI CCTAGG 1 cut(s) 3215
BlpI GCTNAGC 1 cut(s) 4173
BmcAI AGTACT 1 cut(s) 2881
BmeT110I CYCGRG 2 cut(s) 2322, 4423
BmgBI CACGTC 1 cut(s) 2180
BmrI ACTGGG 4 cut(s) 93, 693, 1743, 4289
BmtI GCTAGC 2 cut(s) 336, 2255
BmuI ACTGGG 4 cut(s) 93, 693, 1743, 4289
BoxI GACNNNNGTC 1 cut(s) 1749
BpiI GAAGAC 3 cut(s) 1853, 2190, 3871
BplI GAGNNNNNCTC 4 cut(s) 749, 781, 4118, 4150
BpmI CTGGAG 4 cut(s) 924, 1083, 1942, 2380
Bpu10I CCTNAGC 3 cut(s) 1302, 3195, 3339
Bpu1102I GCTNAGC 1 cut(s) 4173
Bpu14I TTCGAA 2 cut(s) 4357, 4610
BpuEI CTTGAG 6 cut(s) 603, 1508, 2340, 2698, 3150, 3522
BpuMI CCSGG 3 cut(s) 1140, 3861, 4266
BsaAI YACGTR 1 cut(s) 1388
BsaBI GATNNNNATC 4 cut(s) 181, 3021, 3078, 3120
BsaHI GRCGYC 4 cut(s) 5, 395, 527, 4261
BsaI GGTCTC 1 cut(s) 2062
BsaWI WCCGGW 1 cut(s) 1351
BsaXI ACNNNNNCTCC 2 cut(s) 951, 981
Bse118I RCCGGY 1 cut(s) 2456
Bse3DI GCAATG 3 cut(s) 63, 407, 3477
Bse8I GATNNNNATC 4 cut(s) 181, 3021, 3078, 3120
BseJI GATNNNNATC 4 cut(s) 181, 3021, 3078, 3120
BseMI GCAATG 3 cut(s) 63, 407, 3477
BseRI GAGGAG 7 cut(s) 1620, 1850, 2303, 2306, 2621, 3525, 4299
BseSI GKGCMC 2 cut(s) 158, 3280
BseYI CCCAGC 3 cut(s) 819, 2037, 2482
BsgI GTGCAG 2 cut(s) 444, 4143
Bsh1236I CGCG 1 cut(s) 338
Bsh1285I CGRYCG 1 cut(s) 293
BshNI GGYRCC 5 cut(s) 203, 236, 1281, 2728, 3277
BsiEI CGRYCG 1 cut(s) 293
BsiHKAI GWGCWC 2 cut(s) 1300, 4564
BsiHKCI CYCGRG 2 cut(s) 2322, 4423
BsiSI CCGG 8 cut(s) 1140, 1352, 2457, 3208, 3797, 3861, 4266, 4667
BsmAI GTCTC 8 cut(s) 621, 671, 1960, 2062, 3150, 3745, 3829, 4407
BsmI GAATGC 4 cut(s) 499, 613, 1257, 3199
Bso31I GGTCTC 1 cut(s) 2062
BsoBI CYCGRG 2 cut(s) 2322, 4423
Bsp119I TTCGAA 2 cut(s) 4357, 4610
Bsp1286I GDGCHC 6 cut(s) 158, 964, 1300, 2613, 3280, 4564
Bsp1407I TGTACA 1 cut(s) 1104
Bsp1720I GCTNAGC 1 cut(s) 4173
Bsp19I CCATGG 2 cut(s) 2136, 4633
BspACI CCGC 8 cut(s) 845, 887, 1135, 2296, 2871, 3286, 3401, 4639
BspFNI CGCG 1 cut(s) 338
BspHI TCATGA 5 cut(s) 319, 1930, 2698, 3913, 3919
BspMAI CTGCAG 2 cut(s) 511, 3571
BspMI ACCTGC 6 cut(s) 334, 1591, 1975, 2641, 3572, 3619
BspOI GCTAGC 2 cut(s) 336, 2255
BspT104I TTCGAA 2 cut(s) 4357, 4610
BspT107I GGYRCC 5 cut(s) 203, 236, 1281, 2728, 3277
BspTNI GGTCTC 1 cut(s) 2062
BsrBI CCGCTC 1 cut(s) 2296
BsrDI GCAATG 3 cut(s) 63, 407, 3477
BsrFI RCCGGY 1 cut(s) 2456
BsrGI TGTACA 1 cut(s) 1104
BssAI RCCGGY 1 cut(s) 2456
BssNI GRCGYC 4 cut(s) 5, 395, 527, 4261
BssSI CACGAG 3 cut(s) 1620, 1788, 4404
BssT1I CCWWGG 9 cut(s) 150, 431, 913, 1073, 2052, 2136, 3215, 4117, 4633
Bst2BI CACGAG 3 cut(s) 1620, 1788, 4404
Bst6I CTCTTC 4 cut(s) 43, 722, 2280, 2331
BstACI GRCGYC 4 cut(s) 5, 395, 527, 4261
BstAPI GCANNNNNTGC 6 cut(s) 194, 494, 1670, 2234, 3587, 3836
BstAUI TGTACA 1 cut(s) 1104
BstBAI YACGTR 1 cut(s) 1388
BstBI TTCGAA 2 cut(s) 4357, 4610
BstC8I GCNNGC 7 cut(s) 334, 1257, 1979, 2235, 2253, 2727, 3617
BstDSI CCRYGG 2 cut(s) 2136, 4633
BstEII GGTNACC 1 cut(s) 1347
BstENI CCTNNNNNAGG 3 cut(s) 3109, 3537, 4554
BstFNI CGCG 1 cut(s) 338
BstHHI GCGC 2 cut(s) 338, 414
BstMAI GTCTC 8 cut(s) 621, 671, 1960, 2062, 3150, 3745, 3829, 4407
BstMCI CGRYCG 1 cut(s) 293
BstNSI RCATGY 2 cut(s) 1981, 3796
BstPAI GACNNNNGTC 1 cut(s) 1749
BstPI GGTNACC 1 cut(s) 1347
BstSFI CTRYAG 7 cut(s) 507, 693, 3039, 3429, 3480, 3567, 3937
BstSLI GKGCMC 2 cut(s) 158, 3280
BstUI CGCG 1 cut(s) 338
BstV2I GAAGAC 3 cut(s) 1853, 2190, 3871
BstX2I RGATCY 3 cut(s) 127, 2159, 3079
BstXI CCANNNNNNTGG 2 cut(s) 489, 4505
BstYI RGATCY 3 cut(s) 127, 2159, 3079
BtgI CCRYGG 2 cut(s) 2136, 4633
BtgZI GCGATG 1 cut(s) 3276
BtrI CACGTC 1 cut(s) 2180
BtsI GCAGTG 5 cut(s) 427, 1948, 2682, 3576, 4528
BveI ACCTGC 6 cut(s) 334, 1591, 1975, 2641, 3572, 3619
Cac8I GCNNGC 7 cut(s) 334, 1257, 1979, 2235, 2253, 2727, 3617
CaiI CAGNNNCTG 4 cut(s) 1028, 3527, 3827, 3980
CciI TCATGA 5 cut(s) 319, 1930, 2698, 3913, 3919
CfoI GCGC 2 cut(s) 338, 414
Cfr10I RCCGGY 1 cut(s) 2456
CseI GACGC 2 cut(s) 1467, 2121
CsiI ACCWGGT 1 cut(s) 790
CspCI CAANNNNNGTGG 2 cut(s) 2055, 2090
DraIII CACNNNGTG 1 cut(s) 2234
EaeI YGGCCR 4 cut(s) 262, 1905, 2454, 3181
Eam1104I CTCTTC 4 cut(s) 43, 722, 2280, 2331
EarI CTCTTC 4 cut(s) 43, 722, 2280, 2331
EciI GGCGGA 2 cut(s) 1124, 3416
Eco130I CCWWGG 9 cut(s) 150, 431, 913, 1073, 2052, 2136, 3215, 4117, 4633
Eco147I AGGCCT 1 cut(s) 436
Eco24I GRGCYC 2 cut(s) 964, 2613
Eco31I GGTCTC 1 cut(s) 2062
Eco32I GATATC 1 cut(s) 706
Eco57I CTGAAG 5 cut(s) 258, 1430, 1719, 2261, 3957
Eco72I CACGTG 1 cut(s) 1388
Eco88I CYCGRG 2 cut(s) 2322, 4423
Eco91I GGTNACC 1 cut(s) 1347
EcoNI CCTNNNNNAGG 3 cut(s) 3109, 3537, 4554
EcoO109I RGGNCCY 5 cut(s) 935, 947, 967, 1964, 4547
EcoO65I GGTNACC 1 cut(s) 1347
EcoRI GAATTC 5 cut(s) 1594, 2974, 3220, 3763, 4567
EcoRV GATATC 1 cut(s) 706
EcoT14I CCWWGG 9 cut(s) 150, 431, 913, 1073, 2052, 2136, 3215, 4117, 4633
EcoT22I ATGCAT 5 cut(s) 199, 865, 1983, 2625, 3121
EcoT38I GRGCYC 2 cut(s) 964, 2613
ErhI CCWWGG 9 cut(s) 150, 431, 913, 1073, 2052, 2136, 3215, 4117, 4633
FalI AAGNNNNNCTT 4 cut(s) 1570, 1602, 2036, 2068
FauI CCCGC 2 cut(s) 852, 894
FauNDI CATATG 1 cut(s) 1116
FbaI TGATCA 3 cut(s) 2626, 3916, 4186
FblI GTMKAC 1 cut(s) 787
FriOI GRGCYC 2 cut(s) 964, 2613
GlaI GCGC 2 cut(s) 337, 413
GsaI CCCAGC 3 cut(s) 823, 2041, 2486
GsuI CTGGAG 4 cut(s) 924, 1083, 1942, 2380
HapII CCGG 8 cut(s) 1140, 1352, 2457, 3208, 3797, 3861, 4266, 4667
HgaI GACGC 2 cut(s) 1467, 2121
HhaI GCGC 2 cut(s) 338, 414
Hin1I GRCGYC 4 cut(s) 5, 395, 527, 4261
Hin6I GCGC 2 cut(s) 336, 412
HinP1I GCGC 2 cut(s) 336, 412
HincII GTYRAC 3 cut(s) 297, 1861, 2082
HindII GTYRAC 3 cut(s) 297, 1861, 2082
HpaII CCGG 8 cut(s) 1140, 1352, 2457, 3208, 3797, 3861, 4266, 4667
Hpy99I CGWCG 2 cut(s) 10, 2036
Hsp92I GRCGYC 4 cut(s) 5, 395, 527, 4261
HspAI GCGC 2 cut(s) 336, 412
KpnI GGTACC 2 cut(s) 207, 1285
Ksp22I TGATCA 3 cut(s) 2626, 3916, 4186
MabI ACCWGGT 1 cut(s) 790
MbiI CCGCTC 1 cut(s) 2296
MfeI CAATTG 1 cut(s) 2565
MflI RGATCY 3 cut(s) 127, 2159, 3079
MhlI GDGCHC 6 cut(s) 158, 964, 1300, 2613, 3280, 4564
MlsI TGGCCA 2 cut(s) 264, 3183
MluNI TGGCCA 2 cut(s) 264, 3183
MlyI GAGTC 7 cut(s) 568, 623, 2183, 2894, 3997, 4409, 4605
MmeI TCCRAC 4 cut(s) 596, 1082, 2736, 2836
Mox20I TGGCCA 2 cut(s) 264, 3183
Mph1103I ATGCAT 5 cut(s) 199, 865, 1983, 2625, 3121
MroXI GAANNNNTTC 4 cut(s) 144, 996, 1850, 3249
MscI TGGCCA 2 cut(s) 264, 3183
MseI TTAA 7 cut(s) 1775, 2016, 2520, 2832, 3176, 3885, 4533
MslI CAYNNNNRTG 8 cut(s) 858, 1377, 1679, 2118, 2618, 2792, 3918, 4182
Msp20I TGGCCA 2 cut(s) 264, 3183
MspA1I CMGCKG 3 cut(s) 1025, 1259, 1667
MspI CCGG 8 cut(s) 1140, 1352, 2457, 3208, 3797, 3861, 4266, 4667
MunI CAATTG 1 cut(s) 2565
Mva1269I GAATGC 4 cut(s) 499, 613, 1257, 3199
MvnI CGCG 1 cut(s) 338
NciI CCSGG 3 cut(s) 1140, 3861, 4266
NcoI CCATGG 2 cut(s) 2136, 4633
NdeI CATATG 1 cut(s) 1116
NheI GCTAGC 2 cut(s) 332, 2251
NmeAIII GCCGAG 1 cut(s) 1883
NmuCI GTSAC 7 cut(s) 396, 523, 563, 3096, 3288, 3745, 4523
NsiI ATGCAT 5 cut(s) 199, 865, 1983, 2625, 3121
NspI RCATGY 2 cut(s) 1981, 3796
NspV TTCGAA 2 cut(s) 4357, 4610
PaeI GCATGC 1 cut(s) 1981
PaeR7I CTCGAG 1 cut(s) 2322
PagI TCATGA 5 cut(s) 319, 1930, 2698, 3913, 3919
PceI AGGCCT 1 cut(s) 436
PctI GAATGC 4 cut(s) 499, 613, 1257, 3199
PdmI GAANNNNTTC 4 cut(s) 144, 996, 1850, 3249
PflMI CCANNNNNTGG 2 cut(s) 437, 4280
PfoI TCCNGGA 1 cut(s) 3599
PleI GAGTC 7 cut(s) 568, 622, 2183, 2893, 3996, 4408, 4604
PmaCI CACGTG 1 cut(s) 1388
PmlI CACGTG 1 cut(s) 1388
PpsI GAGTC 7 cut(s) 568, 622, 2183, 2893, 3996, 4408, 4604
Ppu21I YACGTR 1 cut(s) 1388
PpuMI RGGWCCY 5 cut(s) 935, 947, 967, 1964, 4547
PshAI GACNNNNGTC 1 cut(s) 1749
Psp5II RGGWCCY 5 cut(s) 935, 947, 967, 1964, 4547
PspCI CACGTG 1 cut(s) 1388
PspEI GGTNACC 1 cut(s) 1347
PspFI CCCAGC 3 cut(s) 819, 2037, 2482
PspPPI RGGWCCY 5 cut(s) 935, 947, 967, 1964, 4547
PspXI VCTCGAGB 1 cut(s) 2322
PsrI GAACNNNNNNTAC 2 cut(s) 3840, 3872
PstI CTGCAG 2 cut(s) 511, 3571
PstNI CAGNNNCTG 4 cut(s) 1028, 3527, 3827, 3980
PsuI RGATCY 3 cut(s) 127, 2159, 3079
PvuII CAGCTG 3 cut(s) 1025, 1259, 1667
RseI CAYNNNNRTG 8 cut(s) 858, 1377, 1679, 2118, 2618, 2792, 3918, 4182
SaqAI TTAA 7 cut(s) 1775, 2016, 2520, 2832, 3176, 3885, 4533
ScaI AGTACT 1 cut(s) 2881
SchI GAGTC 7 cut(s) 568, 623, 2183, 2894, 3997, 4409, 4605
SduI GDGCHC 6 cut(s) 158, 964, 1300, 2613, 3280, 4564
SexAI ACCWGGT 1 cut(s) 790
SfcI CTRYAG 7 cut(s) 507, 693, 3039, 3429, 3480, 3567, 3937
Sfr274I CTCGAG 1 cut(s) 2322
SfuI TTCGAA 2 cut(s) 4357, 4610
SlaI CTCGAG 1 cut(s) 2322
SmiMI CAYNNNNRTG 8 cut(s) 858, 1377, 1679, 2118, 2618, 2792, 3918, 4182
SmlI CTYRAG 7 cut(s) 618, 1487, 2322, 2355, 2713, 3165, 3537
SmoI CTYRAG 7 cut(s) 618, 1487, 2322, 2355, 2713, 3165, 3537
SpeI ACTAGT 1 cut(s) 2789
SphI GCATGC 1 cut(s) 1981
SseBI AGGCCT 1 cut(s) 436
SsiI CCGC 8 cut(s) 845, 887, 1135, 2296, 2871, 3286, 3401, 4639
StuI AGGCCT 1 cut(s) 436
StyI CCWWGG 9 cut(s) 150, 431, 913, 1073, 2052, 2136, 3215, 4117, 4633
TaqII GACCGA 1 cut(s) 1617
TatI WGTACW 2 cut(s) 1104, 2879
TauI GCSGC 1 cut(s) 4642
Tru1I TTAA 7 cut(s) 1775, 2016, 2520, 2832, 3176, 3885, 4533
Tru9I TTAA 7 cut(s) 1775, 2016, 2520, 2832, 3176, 3885, 4533
TseFI GTSAC 7 cut(s) 396, 523, 563, 3096, 3288, 3745, 4523
Tsp45I GTSAC 7 cut(s) 396, 523, 563, 3096, 3288, 3745, 4523
Van91I CCANNNNNTGG 2 cut(s) 437, 4280
XagI CCTNNNNNAGG 3 cut(s) 3109, 3537, 4554
XceI RCATGY 2 cut(s) 1981, 3796
XcmI CCANNNNNNNNNTGG 4 cut(s) 827, 971, 1091, 4165
XhoI CTCGAG 1 cut(s) 2322
XmaJI CCTAGG 1 cut(s) 3215
XmiI GTMKAC 1 cut(s) 787
XmnI GAANNNNTTC 4 cut(s) 144, 996, 1850, 3249
ZraI GACGTC 4 cut(s) 6, 396, 528, 4262
ZrmI AGTACT 1 cut(s) 2881
Zsp2I ATGCAT 5 cut(s) 199, 865, 1983, 2625, 3121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.