Rw7G011400

Protein MODIFIER OF SNC1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0003588
Physical Location & Seq
Forward (+)
10691872 .. 10698457
6586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G011400.1

Sequence Viewer

Length: 4611 bp
ATGACGTCGAGTATGTTGTCTGGGGATCGGAGGTGGGCTTCTGCCAGAAGAGGTGCAATGACTGTTTTAGGGAAAGTCCCGAGGCCTATAAATTTACCCAGTCAGAGGTTAGAAAATCATGGTATGGATCCATCTGTGGAAATTGTTCCCAAGGGCACTCTCAGTTGGGGCAGTAGATCATCATCTGCATCAAATGCATGGGGTACCTCATCACTTTCTCCAAATACTGATGGTGGCACCACTTCACCAAGTTATCTCAGTGGCCACATTTCTTCAGGAAGTGGCACTCGACCGTCAACTGCTGGTAGTGAAAAATCTCATGAACCTGCTGCTAGCGCGTGGGGTCCAAACTCTAGGCCATCATCGGCCTCTGGGGTATTGACATCAAATCAGACGTCACTGGCATCATTGCGCCCTCGCAGTGCAGAACCAAGGCCTGGTAGTTCACAGTTGTCAAGATTTGCTGAACACTCTGAACATCCAGTGGCATGGAATGCTCCTGGGACTGCAGAAAAATTGGGAGTGTCGTCATCAAAGAATGAAGGGTTTTCTCTCACTTCTGGTGACTTTCCGACTCTTGGTTCAGAAAAGGATAATTCTGGAAAGAATGCTGAGTCTCAAGATCACAGTGCTTACTCTCGCCCTGGCTCATCTTCTGGTGGTGGAGTGGCAAAAGAGACAACTGGGACTTCTGTAGTTGGTGATATCTCTGTAAATGCAAGTGTGAAGAGTGGAACTGGTAATTCATGGAAAAGAGAGAATCCCTCATACAATGAAGATGGAGGTAGACCTGGTATGGAGAAGTGGCAGGGAAATCCCCAGCCTTACCCTGGTGCTAGTGTCCCGCCCCAACATTATGATGCATGGCATGGTGGTCCTGTTCACCCGCAAGGTGGTCCTCCAGGGGGTCCTCCTTTTGGAGCCCAGGTCCCTCCTGGTGGCTTCCCAATGGAACCATTTCCATATTATCCTCCACAAATTCCAGCTGCTGCTCTTGCCAACCCACAGCCTGTTCCTCCAACTGGAGCAGGACCAAGGGGACACCATCCTAAAAATGGAGAGATGTACAGACCTCATATGCCAGAGGCATATATCCGCCCCGGTATGCCAATTAGACCTGGATTTTACCCTGGTCCTGTGGCCTTTGAGGGATATTATGGTTCACCAATGGGATATTGCAATTCAAATGAACGAGATGTCCCATTTGTGGGAATGCCAGCTGGTCCTCCCGTCTATAACAGGTACCCTAGCCAAAGTGCTCCTGAGCCTGGCAGACCTAGTGGATATGGTCCCACCAGCCAAACAGGGTTACCAGAGAAAATAGCATCTGGTCATCCACATGATACACGAGGACCATACAAAGTTCTTCTGAAGCAGCATGATGGTTGGGATAGAAGAAATGAAGAACAGAGAAGTGAGGTTGCTGTAACAACCAATGCGTCATGTCTTGAGAGTGAGGACCAACCAAGAGCATTGTCATTGGAGAATGATTGGAGATCAGATCGCAGAAAGGAGGGAGAGAGGGATCGAAGGAGTGAAAGACCTGCTTCGCAGAATTCTGACCGAGGAGCTTCTTCTGCTCGTGTCAAAGTCAAATCCCCTGAAAGTTTGGGTAATATGAGGGCAGCTGATGCCATTCCAGTGAAGAAATTGGAAACTGAAGCCTGTGGCACACAAGATATTGCACAAACACTCTCTGCAAAAGACCCCAGTCTGATTCAGAAAATAGAGGGATTAAATGCCAAAGCACGAGTTTCTGATGGACGAGGTGATACTGCATCTGTTTCCATTAGGGAGGAGCAAAGGAAGACATTCCAAGTCAACCCTAAATCTAACAGTTCAGTAAATGAACCAGGTAGTGGCTCGGCCACTGAAATCATAAATTCCTCTCATGAAGTCAGCAGTGGAATTTCTGTCTCCAGGGGACCTGCTCATGGCATGCATGGTAAATCAGATAATCGTGGTAGAGGAAGGTTTAATAACCAAGAAGGCGACGGCTGGGGGAAGAAATCCTTGGTCTCTGAACCAACATCTGTGGTGTCAACTGCAAATTCAAAAGTTCCTTCTAATGTTCATGTGCATGACCACCTTGCATCCATGGAAGCTACTGAAAAGTCTGGATCTTATCCACAAGGCAGACGTGAAGACGACTCATTGACACCAATGTTTGATCCAAATGATTCTGAGGCACAGCGTGCTAAGATGAAGGAGCTAGCCAAGCAACGTACCAAACAGCTTCAGGAGGAAGAGGAGGAGCGGACAAGAAGGCAGATGGCGAAGGCTCGAGCAAAATTAGAAGAGTTGAACAGACGTACTCAAGTGGTGGACGGTTCAAATCAAAAGTTTGAAAATTCCTCCAGTGGTGATGTCCAGAGTAAACAAGAAGAATCTCAAACTTCTGGTGAACCATTAGTGGCCGGTAGGAAATATGATCCACAAGTCCCAGCTTTCGGTTCTAACCTCAATGCTGTTGAACAGATTAAAGAGTGCATCAGTGTTGAAGTTGCAGAATCAACTGTTCCATCAATTGAGCTACCTTCGGAGAGGCCAAAGAGTGCCTACAAGGAGGAGCCCATTTTCATGCATGATCAACCTGTGCCTTTGCAGCAGCAGGTTACTATTGCTAATACTGCTCATCACAACACTGCTTCCCAGGCCATGATAGCAAACACTCGGTTGGAAAAGAAGTCTATTGGGAAGAATACTTCCACTAGTATGACTGACACACCAAATAGTCAGACAGATACAGTGATTAATGTGTCCTCATCTGGTGGAGTTGGAGCTACTTCAACCGCATTGAGTACTGAGTCAAGCCTGACTGCAAATTCTAGTGCTATACTTGAGTCATCTTCTCATCCAAGAAAGAAAAATAACAGAAGTGGCAAGAACAAGCAGAGAGCAGAGAATTCATCATCTGTGGCTGCTATATCATCATCTATATCAAATGATACAAATCATGCAAACACCACTATAGAAACTGGAAAACCAAATGTACCTAATGTGGATTTAGATCCTAGCTCAGTTCAGTCACAGACCTTTTCTAGGGATGCATATCAGTCGATGGAGCAGCACTTGTCTCTACCAAACGAAGAATCTCAAGGTAGATTAAGTGGCCAGTGGAAACCTCAGCATTCTCGCCGGATGCCTAGGAATTCACAAGCTATCAGGCACTCGGAAAAATTTCAAAGCAGCGATGCTGTTATGTGGGCACCAGTGCGGTCACAGAACAAAACTGATGTAACTGATGATGCCATCCCCAAAACCGAAGCTGAGGCTGTCAGTGCTGTAAAGAGCGACCATCAAGTGCAAAATAATTCAAGAAATAAGAGGGCGGAAATGGAGAGATATGTTCCAAAGCCTGTAGCTAAAGAAATGGCACATCAAGGAAGCACTCAACAAGCAATGGTTTCTGTAGTGCATCAGACTGCAATAAATGAGAACATCAGGGGAGCAGATTCTGGTCCTCCTCAAGGTGTCGAAAATTCTCAACCTAGTGCTGCAGTGGGAAAAGCAGGTTTTGCCATAGAATCCAGGAATGGGAGTAGCAGGCAAAATAAGCAGGTAAAAGCACATGGGTCGTGGCGACAACGGGGATCAGCAGAACCAACCAACACGCAAGGTTTCCATGAGGAACCATCATATACTTCAAATGTTGGTCGGAGTGATATTGTCTCAGTGACAGAGCAACCAAAGAATTCTGATGATTGGAATGATGGATGGAACATGCCGGATGAACCCAACACTGTTGTACCAGTCTCTGCATCTATTGCTGTAAAAGAACAGGGAATACCCGGAAGACGAAAGCAGCATCCATTTAAGGGACAAAAAACTGTGGCAAATAATCATGATCATGAGCAAAAGAAAAACTATAGGGGGGATGCTGACAGAATCTACACCAAATCTTCAGCCTCTGAAATGAGTCAAACAGAGTTACCTTCTGCTTCTAAAGAGAATCAAGCTGTTGGGGAACGTGCAATTCCTCATTGGCAGCCCAAATCTCAGGCATTTGCAGCCAATAATCATCGAGGAAACAGGGCTACTGGTCCCCAAGGTGCAGAGCCACTCTCACCAACAACTGACAAAGATACCTCTGAACATCTGGCTCAGCATCGACATGATCAATACAAGTCTGAAAGAAACAATGCAGGGGAAGGACAGAACAGGAGGGAGAGGAAAACAACACACAAGGGACGTCCCGGCTCCCCAAGTCATGGTCCTATCAGCCCAGTCGAACTGGCTCCTCCTAGTATGGATGCTAGACAAGAGCATCAGTTTCAAACGGGGTTTCGAAGGAATGGAAACCAAAACAACCGTTTCAGCAGAGGGCAAGAGTCTCGTGGGGATTGGAATTACTCGGGGCATGATGGTAGGCAGCAAAACCCCCCTGCAAATCGGGACAGGCAGAGGCACAGTTCCCATTTGGAGTACCAGCCAGTTGGGCCATACAACAGCAGTGACAAATTTAACAATTCCGAGGGACCTAGAGAAGGTGCTCAGAATTCAGGTGGTGGAAGGGTCAAGGAAAGAGTCCAGGGTCATTCGAAACGTAGTGGAGGGAACTTCCATGGGCGGCAAAGTGGCACTATTCGAGTAGTGCCGGATATGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAT2_N

Protein Analysis

1536

Amino Acids

166.13

Weight (kDa)

9.09

Isoelectric Point (pI)

56.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAT2_N PF07001 15 - 128 5.6e-07 BAT2 N-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 8, 398, 4195
Acc36I ACCTGC 6 cut(s) 334, 1552, 1936, 2602, 3503, 3550
Acc65I GGTACC 2 cut(s) 203, 1242
AccB1I GGYRCC 4 cut(s) 203, 236, 1242, 3208
AccB7I CCANNNNNTGG 3 cut(s) 437, 1859, 4211
AccBSI CCGCTC 1 cut(s) 2257
AccI GTMKAC 1 cut(s) 787
AccII CGCG 1 cut(s) 338
AciI CCGC 8 cut(s) 845, 887, 1096, 2257, 2793, 3217, 3332, 4570
AclWI GGATC 9 cut(s) 33, 122, 135, 1533, 2128, 2165, 2426, 3005, 3601
AcoI YGGCCR 4 cut(s) 262, 1866, 2415, 3112
AcuI CTGAAG 5 cut(s) 258, 1391, 1680, 2222, 3888
AcyI GRCGYC 3 cut(s) 5, 395, 4192
AdeI CACNNNGTG 1 cut(s) 2195
AfaI GTAC 9 cut(s) 205, 1067, 1244, 2227, 2314, 2803, 2994, 3750, 4427
AhlI ACTAGT 1 cut(s) 2711
AjiI CACGTC 1 cut(s) 2141
AjuI GAANNNNNNNTTGG 2 cut(s) 1997, 2029
AloI GAACNNNNNNTCC 2 cut(s) 1182, 1214
Alw21I GWGCWC 2 cut(s) 1261, 4495
Alw26I GTCTC 8 cut(s) 621, 671, 1921, 2023, 3081, 3676, 3760, 4338
AlwI GGATC 9 cut(s) 33, 122, 135, 1533, 2128, 2165, 2426, 3005, 3601
AlwNI CAGNNNCTG 4 cut(s) 989, 3458, 3758, 3911
Ama87I CYCGRG 3 cut(s) 79, 2283, 4354
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
AseI ATTAAT 1 cut(s) 2754
Asp700I GAANNNNTTC 4 cut(s) 144, 957, 1811, 3180
Asp718I GGTACC 2 cut(s) 203, 1242
AspA2I CCTAGG 1 cut(s) 3146
AspLEI GCGC 2 cut(s) 338, 414
AsuC2I CCSGG 3 cut(s) 1101, 3792, 4197
AsuHPI GGTGA 9 cut(s) 237, 575, 713, 875, 1155, 1781, 2375, 2414, 4059
AsuII TTCGAA 2 cut(s) 4288, 4541
AsuNHI GCTAGC 2 cut(s) 332, 2212
AvaI CYCGRG 3 cut(s) 79, 2283, 4354
AvrII CCTAGG 1 cut(s) 3146
BaeGI GKGCMC 2 cut(s) 158, 3211
BaeI ACNNNNGTAYC 2 cut(s) 3732, 3765
BalI TGGCCA 2 cut(s) 264, 3114
BamHI GGATCC 1 cut(s) 127
BanI GGYRCC 4 cut(s) 203, 236, 1242, 3208
BanII GRGCYC 2 cut(s) 925, 2574
BauI CACGAG 4 cut(s) 1347, 1581, 1749, 4335
BbsI GAAGAC 3 cut(s) 1814, 2151, 3802
Bbv12I GWGCWC 2 cut(s) 1261, 4495
BbvCI CCTCAGC 2 cut(s) 3126, 3270
BceAI ACGGC 1 cut(s) 2011
BcgI CGANNNNNNTGC 6 cut(s) 3039, 3073, 3558, 3592, 4316, 4350
BclI TGATCA 3 cut(s) 2587, 3847, 4117
BcnI CCSGG 3 cut(s) 1101, 3792, 4197
BcoDI GTCTC 8 cut(s) 621, 671, 1921, 2023, 3081, 3676, 3760, 4338
BcuI ACTAGT 1 cut(s) 2711
BfmI CTRYAG 7 cut(s) 507, 693, 2970, 3360, 3411, 3498, 3868
BfuAI ACCTGC 6 cut(s) 334, 1552, 1936, 2602, 3503, 3550
BglI GCCNNNNNGGC 1 cut(s) 4438
BlnI CCTAGG 1 cut(s) 3146
BlpI GCTNAGC 1 cut(s) 4104
BmcAI AGTACT 1 cut(s) 2803
BmeT110I CYCGRG 3 cut(s) 79, 2283, 4354
BmgBI CACGTC 1 cut(s) 2141
BmrI ACTGGG 4 cut(s) 93, 693, 1704, 4220
BmtI GCTAGC 2 cut(s) 336, 2216
BmuI ACTGGG 4 cut(s) 93, 693, 1704, 4220
BoxI GACNNNNGTC 1 cut(s) 1710
BpiI GAAGAC 3 cut(s) 1814, 2151, 3802
BplI GAGNNNNNCTC 4 cut(s) 749, 781, 4049, 4081
BpmI CTGGAG 4 cut(s) 885, 1044, 1903, 2341
Bpu10I CCTNAGC 3 cut(s) 1263, 3126, 3270
Bpu1102I GCTNAGC 1 cut(s) 4104
Bpu14I TTCGAA 2 cut(s) 4288, 4541
BpuEI CTTGAG 6 cut(s) 603, 1469, 2301, 2861, 3081, 3453
BpuMI CCSGG 3 cut(s) 1101, 3792, 4197
BsaBI GATNNNNATC 4 cut(s) 181, 2952, 3009, 3051
BsaHI GRCGYC 3 cut(s) 5, 395, 4192
BsaI GGTCTC 1 cut(s) 2023
BsaXI ACNNNNNCTCC 2 cut(s) 912, 942
Bse118I RCCGGY 1 cut(s) 2417
Bse3DI GCAATG 3 cut(s) 63, 407, 3408
Bse8I GATNNNNATC 4 cut(s) 181, 2952, 3009, 3051
BseJI GATNNNNATC 4 cut(s) 181, 2952, 3009, 3051
BseMI GCAATG 3 cut(s) 63, 407, 3408
BseRI GAGGAG 7 cut(s) 1581, 1811, 2264, 2267, 2582, 3456, 4230
BseSI GKGCMC 2 cut(s) 158, 3211
BseYI CCCAGC 3 cut(s) 819, 1998, 2443
BsgI GTGCAG 2 cut(s) 444, 4074
Bsh1236I CGCG 1 cut(s) 338
Bsh1285I CGRYCG 1 cut(s) 293
BshNI GGYRCC 4 cut(s) 203, 236, 1242, 3208
BsiEI CGRYCG 1 cut(s) 293
BsiHKAI GWGCWC 2 cut(s) 1261, 4495
BsiHKCI CYCGRG 3 cut(s) 79, 2283, 4354
BsiSI CCGG 7 cut(s) 1101, 2418, 3139, 3728, 3792, 4197, 4598
BsmAI GTCTC 8 cut(s) 621, 671, 1921, 2023, 3081, 3676, 3760, 4338
BsmI GAATGC 4 cut(s) 499, 613, 1218, 3130
Bso31I GGTCTC 1 cut(s) 2023
BsoBI CYCGRG 3 cut(s) 79, 2283, 4354
Bsp119I TTCGAA 2 cut(s) 4288, 4541
Bsp1286I GDGCHC 6 cut(s) 158, 925, 1261, 2574, 3211, 4495
Bsp1407I TGTACA 1 cut(s) 1065
Bsp1720I GCTNAGC 1 cut(s) 4104
Bsp19I CCATGG 2 cut(s) 2097, 4564
BspACI CCGC 8 cut(s) 845, 887, 1096, 2257, 2793, 3217, 3332, 4570
BspFNI CGCG 1 cut(s) 338
BspHI TCATGA 4 cut(s) 319, 1891, 3844, 3850
BspMAI CTGCAG 2 cut(s) 511, 3502
BspMI ACCTGC 6 cut(s) 334, 1552, 1936, 2602, 3503, 3550
BspOI GCTAGC 2 cut(s) 336, 2216
BspPI GGATC 9 cut(s) 33, 122, 135, 1533, 2128, 2165, 2426, 3005, 3601
BspT104I TTCGAA 2 cut(s) 4288, 4541
BspT107I GGYRCC 4 cut(s) 203, 236, 1242, 3208
BspTNI GGTCTC 1 cut(s) 2023
BsrBI CCGCTC 1 cut(s) 2257
BsrDI GCAATG 3 cut(s) 63, 407, 3408
BsrFI RCCGGY 1 cut(s) 2417
BsrGI TGTACA 1 cut(s) 1065
BssAI RCCGGY 1 cut(s) 2417
BssNI GRCGYC 3 cut(s) 5, 395, 4192
BssSI CACGAG 4 cut(s) 1347, 1581, 1749, 4335
BssT1I CCWWGG 8 cut(s) 150, 431, 1034, 2013, 2097, 3146, 4048, 4564
Bst2BI CACGAG 4 cut(s) 1347, 1581, 1749, 4335
Bst6I CTCTTC 4 cut(s) 43, 722, 2241, 2292
BstACI GRCGYC 3 cut(s) 5, 395, 4192
BstAPI GCANNNNNTGC 6 cut(s) 194, 494, 1631, 2195, 3518, 3767
BstAUI TGTACA 1 cut(s) 1065
BstBI TTCGAA 2 cut(s) 4288, 4541
BstC8I GCNNGC 6 cut(s) 334, 1218, 1940, 2196, 2214, 3548
BstDSI CCRYGG 2 cut(s) 2097, 4564
BstEII GGTNACC 1 cut(s) 1308
BstENI CCTNNNNNAGG 3 cut(s) 3040, 3468, 4485
BstFNI CGCG 1 cut(s) 338
BstHHI GCGC 2 cut(s) 338, 414
BstMAI GTCTC 8 cut(s) 621, 671, 1921, 2023, 3081, 3676, 3760, 4338
BstMCI CGRYCG 1 cut(s) 293
BstNSI RCATGY 2 cut(s) 1942, 3727
BstPAI GACNNNNGTC 1 cut(s) 1710
BstPI GGTNACC 1 cut(s) 1308
BstSFI CTRYAG 7 cut(s) 507, 693, 2970, 3360, 3411, 3498, 3868
BstSLI GKGCMC 2 cut(s) 158, 3211
BstUI CGCG 1 cut(s) 338
BstV2I GAAGAC 3 cut(s) 1814, 2151, 3802
BstX2I RGATCY 3 cut(s) 127, 2120, 3010
BstXI CCANNNNNNTGG 2 cut(s) 489, 4436
BstYI RGATCY 3 cut(s) 127, 2120, 3010
BtgI CCRYGG 2 cut(s) 2097, 4564
BtgZI GCGATG 1 cut(s) 3207
BtrI CACGTC 1 cut(s) 2141
BtsI GCAGTG 5 cut(s) 427, 1909, 2643, 3507, 4459
BveI ACCTGC 6 cut(s) 334, 1552, 1936, 2602, 3503, 3550
Cac8I GCNNGC 6 cut(s) 334, 1218, 1940, 2196, 2214, 3548
CaiI CAGNNNCTG 4 cut(s) 989, 3458, 3758, 3911
CciI TCATGA 4 cut(s) 319, 1891, 3844, 3850
CfoI GCGC 2 cut(s) 338, 414
Cfr10I RCCGGY 1 cut(s) 2417
CseI GACGC 1 cut(s) 1428
CsiI ACCWGGT 2 cut(s) 790, 1852
Csp6I GTAC 9 cut(s) 204, 1066, 1243, 2226, 2313, 2802, 2993, 3749, 4426
CspCI CAANNNNNGTGG 2 cut(s) 2016, 2051
CviQI GTAC 9 cut(s) 204, 1066, 1243, 2226, 2313, 2802, 2993, 3749, 4426
DraIII CACNNNGTG 1 cut(s) 2195
EaeI YGGCCR 4 cut(s) 262, 1866, 2415, 3112
Eam1104I CTCTTC 4 cut(s) 43, 722, 2241, 2292
EarI CTCTTC 4 cut(s) 43, 722, 2241, 2292
EciI GGCGGA 2 cut(s) 1085, 3347
Eco130I CCWWGG 8 cut(s) 150, 431, 1034, 2013, 2097, 3146, 4048, 4564
Eco147I AGGCCT 2 cut(s) 85, 436
Eco24I GRGCYC 2 cut(s) 925, 2574
Eco31I GGTCTC 1 cut(s) 2023
Eco32I GATATC 1 cut(s) 706
Eco57I CTGAAG 5 cut(s) 258, 1391, 1680, 2222, 3888
Eco88I CYCGRG 3 cut(s) 79, 2283, 4354
Eco91I GGTNACC 1 cut(s) 1308
EcoNI CCTNNNNNAGG 3 cut(s) 3040, 3468, 4485
EcoO109I RGGNCCY 4 cut(s) 908, 928, 1925, 4478
EcoO65I GGTNACC 1 cut(s) 1308
EcoRI GAATTC 5 cut(s) 1555, 2905, 3151, 3694, 4498
EcoRV GATATC 1 cut(s) 706
EcoT14I CCWWGG 8 cut(s) 150, 431, 1034, 2013, 2097, 3146, 4048, 4564
EcoT22I ATGCAT 5 cut(s) 199, 865, 1944, 2586, 3052
EcoT38I GRGCYC 2 cut(s) 925, 2574
ErhI CCWWGG 8 cut(s) 150, 431, 1034, 2013, 2097, 3146, 4048, 4564
FalI AAGNNNNNCTT 4 cut(s) 1531, 1563, 1997, 2029
FauI CCCGC 2 cut(s) 852, 894
FauNDI CATATG 1 cut(s) 1077
FbaI TGATCA 3 cut(s) 2587, 3847, 4117
FblI GTMKAC 1 cut(s) 787
FriOI GRGCYC 2 cut(s) 925, 2574
GlaI GCGC 2 cut(s) 337, 413
GsaI CCCAGC 3 cut(s) 823, 2002, 2447
GsuI CTGGAG 4 cut(s) 885, 1044, 1903, 2341
HapII CCGG 7 cut(s) 1101, 2418, 3139, 3728, 3792, 4197, 4598
HgaI GACGC 1 cut(s) 1428
HhaI GCGC 2 cut(s) 338, 414
Hin1I GRCGYC 3 cut(s) 5, 395, 4192
Hin6I GCGC 2 cut(s) 336, 412
HinP1I GCGC 2 cut(s) 336, 412
HincII GTYRAC 3 cut(s) 297, 1822, 2043
HindII GTYRAC 3 cut(s) 297, 1822, 2043
HpaII CCGG 7 cut(s) 1101, 2418, 3139, 3728, 3792, 4197, 4598
HphI GGTGA 9 cut(s) 237, 575, 713, 875, 1155, 1781, 2375, 2414, 4059
Hpy99I CGWCG 2 cut(s) 10, 1997
HpyCH4IV ACGT 8 cut(s) 5, 395, 2140, 2224, 2311, 3970, 4192, 4546
HpySE526I ACGT 8 cut(s) 5, 395, 2140, 2224, 2311, 3970, 4192, 4546
Hsp92I GRCGYC 3 cut(s) 5, 395, 4192
HspAI GCGC 2 cut(s) 336, 412
KpnI GGTACC 2 cut(s) 207, 1246
Ksp22I TGATCA 3 cut(s) 2587, 3847, 4117
MabI ACCWGGT 2 cut(s) 790, 1852
MaeII ACGT 8 cut(s) 5, 395, 2140, 2224, 2311, 3970, 4192, 4546
MbiI CCGCTC 1 cut(s) 2257
MfeI CAATTG 1 cut(s) 2526
MflI RGATCY 3 cut(s) 127, 2120, 3010
MhlI GDGCHC 6 cut(s) 158, 925, 1261, 2574, 3211, 4495
MlsI TGGCCA 2 cut(s) 264, 3114
MluNI TGGCCA 2 cut(s) 264, 3114
MlyI GAGTC 8 cut(s) 568, 623, 2144, 2816, 2852, 3928, 4340, 4536
MmeI TCCRAC 5 cut(s) 596, 1043, 2658, 2758, 3638
Mox20I TGGCCA 2 cut(s) 264, 3114
Mph1103I ATGCAT 5 cut(s) 199, 865, 1944, 2586, 3052
MroXI GAANNNNTTC 4 cut(s) 144, 957, 1811, 3180
MscI TGGCCA 2 cut(s) 264, 3114
MseI TTAA 7 cut(s) 1736, 1977, 2481, 2754, 3107, 3816, 4464
MslI CAYNNNNRTG 8 cut(s) 858, 1338, 1640, 2079, 2579, 2714, 3849, 4113
Msp20I TGGCCA 2 cut(s) 264, 3114
MspA1I CMGCKG 3 cut(s) 986, 1220, 1628
MspI CCGG 7 cut(s) 1101, 2418, 3139, 3728, 3792, 4197, 4598
MunI CAATTG 1 cut(s) 2526
Mva1269I GAATGC 4 cut(s) 499, 613, 1218, 3130
MvnI CGCG 1 cut(s) 338
NciI CCSGG 3 cut(s) 1101, 3792, 4197
NcoI CCATGG 2 cut(s) 2097, 4564
NdeI CATATG 1 cut(s) 1077
NheI GCTAGC 2 cut(s) 332, 2212
NmeAIII GCCGAG 1 cut(s) 1844
NmuCI GTSAC 6 cut(s) 396, 563, 3027, 3219, 3676, 4454
NsiI ATGCAT 5 cut(s) 199, 865, 1944, 2586, 3052
NspI RCATGY 2 cut(s) 1942, 3727
NspV TTCGAA 2 cut(s) 4288, 4541
PaeI GCATGC 1 cut(s) 1942
PaeR7I CTCGAG 1 cut(s) 2283
PagI TCATGA 4 cut(s) 319, 1891, 3844, 3850
PceI AGGCCT 2 cut(s) 85, 436
PctI GAATGC 4 cut(s) 499, 613, 1218, 3130
PdmI GAANNNNTTC 4 cut(s) 144, 957, 1811, 3180
PflMI CCANNNNNTGG 3 cut(s) 437, 1859, 4211
PfoI TCCNGGA 1 cut(s) 3530
PleI GAGTC 8 cut(s) 568, 622, 2144, 2815, 2851, 3927, 4339, 4535
PpsI GAGTC 8 cut(s) 568, 622, 2144, 2815, 2851, 3927, 4339, 4535
PpuMI RGGWCCY 4 cut(s) 908, 928, 1925, 4478
PshAI GACNNNNGTC 1 cut(s) 1710
PshBI ATTAAT 1 cut(s) 2754
Psp5II RGGWCCY 4 cut(s) 908, 928, 1925, 4478
PspEI GGTNACC 1 cut(s) 1308
PspFI CCCAGC 3 cut(s) 819, 1998, 2443
PspPPI RGGWCCY 4 cut(s) 908, 928, 1925, 4478
PspXI VCTCGAGB 1 cut(s) 2283
PsrI GAACNNNNNNTAC 2 cut(s) 3771, 3803
PstI CTGCAG 2 cut(s) 511, 3502
PstNI CAGNNNCTG 4 cut(s) 989, 3458, 3758, 3911
PsuI RGATCY 3 cut(s) 127, 2120, 3010
PvuII CAGCTG 3 cut(s) 986, 1220, 1628
RsaI GTAC 9 cut(s) 205, 1067, 1244, 2227, 2314, 2803, 2994, 3750, 4427
RsaNI GTAC 9 cut(s) 204, 1066, 1243, 2226, 2313, 2802, 2993, 3749, 4426
RseI CAYNNNNRTG 8 cut(s) 858, 1338, 1640, 2079, 2579, 2714, 3849, 4113
SaqAI TTAA 7 cut(s) 1736, 1977, 2481, 2754, 3107, 3816, 4464
ScaI AGTACT 1 cut(s) 2803
SchI GAGTC 8 cut(s) 568, 623, 2144, 2816, 2852, 3928, 4340, 4536
SduI GDGCHC 6 cut(s) 158, 925, 1261, 2574, 3211, 4495
SexAI ACCWGGT 2 cut(s) 790, 1852
SfcI CTRYAG 7 cut(s) 507, 693, 2970, 3360, 3411, 3498, 3868
Sfr274I CTCGAG 1 cut(s) 2283
SfuI TTCGAA 2 cut(s) 4288, 4541
SlaI CTCGAG 1 cut(s) 2283
SmiMI CAYNNNNRTG 8 cut(s) 858, 1338, 1640, 2079, 2579, 2714, 3849, 4113
SmlI CTYRAG 7 cut(s) 618, 1448, 2283, 2316, 2840, 3096, 3468
SmoI CTYRAG 7 cut(s) 618, 1448, 2283, 2316, 2840, 3096, 3468
SpeI ACTAGT 1 cut(s) 2711
SphI GCATGC 1 cut(s) 1942
SseBI AGGCCT 2 cut(s) 85, 436
SsiI CCGC 8 cut(s) 845, 887, 1096, 2257, 2793, 3217, 3332, 4570
StuI AGGCCT 2 cut(s) 85, 436
StyI CCWWGG 8 cut(s) 150, 431, 1034, 2013, 2097, 3146, 4048, 4564
TaiI ACGT 8 cut(s) 8, 398, 2143, 2227, 2314, 3973, 4195, 4549
TaqII GACCGA 1 cut(s) 1578
TatI WGTACW 2 cut(s) 1065, 2801
TauI GCSGC 1 cut(s) 4573
Tru1I TTAA 7 cut(s) 1736, 1977, 2481, 2754, 3107, 3816, 4464
Tru9I TTAA 7 cut(s) 1736, 1977, 2481, 2754, 3107, 3816, 4464
TseFI GTSAC 6 cut(s) 396, 563, 3027, 3219, 3676, 4454
Tsp45I GTSAC 6 cut(s) 396, 563, 3027, 3219, 3676, 4454
Van91I CCANNNNNTGG 3 cut(s) 437, 1859, 4211
VspI ATTAAT 1 cut(s) 2754
XagI CCTNNNNNAGG 3 cut(s) 3040, 3468, 4485
XceI RCATGY 2 cut(s) 1942, 3727
XcmI CCANNNNNNNNNTGG 3 cut(s) 827, 932, 1052
XhoI CTCGAG 1 cut(s) 2283
XmaJI CCTAGG 1 cut(s) 3146
XmiI GTMKAC 1 cut(s) 787
XmnI GAANNNNTTC 4 cut(s) 144, 957, 1811, 3180
ZraI GACGTC 3 cut(s) 6, 396, 4193
ZrmI AGTACT 1 cut(s) 2803
Zsp2I ATGCAT 5 cut(s) 199, 865, 1944, 2586, 3052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.