FvH4_5g12280

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0016335
Physical Location & Seq
Forward (+)
6902671 .. 6904189
1519 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g12280.t1

Sequence Viewer

Length: 717 bp
ATGGCTAACAGTAACCCTAATGGGAAGAGGTCCCGAGATGAAGACGACTCGGGACGGAACAACGATGTGGTTGAGTTCCGTCCCGAGGCGAAACTCATCCGAGTTGATTCGGGCAGCTCCATCGACTCGGATGCTAGCTCGGGAGAGTCGGCCGCCCGAGTTAATCCGGTCGACGCGGAGGAGTTCGACATGGACTCGGCCGAGGCGAAGAAGATTCAGGAGGACCTGTTGAACATACTGGACGACTCGGAGGCCGTCACGGAGGAGCGTGACCCGGCGATTCAGGGGCTGGAATCGGTCATTAAAAGCTTTGAGGAGGAGATACAAGTTCCGGCACCAGCGGCATTTGCTCCTCCCGTTGAAACGGCGTCGGGATCGGGAGAGTCGTCGCCGTCGTCTCAGCCGGAGCTCGGTTACTTGCTTGAGGCTTCGGACGACGAGCTAGGTCTCCCGCCGACCAACAATGGAGCTGTGACGGAGGAGAGGAAAATGGAAGCGGCTGATTTCACGGCGAGTCCTCCGGCCGCCGCATTGGACGGAATGCTTGGGTTTGAGAACGACATTATTCCGAGTTACGACGCGTTCGATTTCGGAATGGGTGCGTACTCGGAGAGTCATGTCGGTGGGGAGTACGTGCCGTTGGGTGGCTTGTTCGACTACTCCGACGGCGGCGTTGCGGAGGCGCCGTGGCGGACGGAGTCGCTTTCTGCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

239

Amino Acids

25.17

Weight (kDa)

4.05

Isoelectric Point (pI)

60.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016335)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12280
malus_domestica MD06G1215300.v1.1 MD14G1226200.v1.1
prunus_persica Prupe.5G220600_v2.0.a1
pyrus_communis pycom06g19200
rosa_chinensis RchiOBHm_Chr7g0185281
rosa_laevigata RLG00000004925
rosa_multiflora Rmu_sc0008496.1_g000015
rosa_roxburghii Rroxscaffold_3G00269090
rosa_rugosa Rorug06G0467500
rosa_samantha Rh7AG075200 Rh7BG072000 Rh7CG073200 Rh7DG072700
rosa_wichuraiana Rw7G006050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 334, 682
AccI GTMKAC 1 cut(s) 171
AccII CGCG 2 cut(s) 176, 581
AclWI GGATC 1 cut(s) 382
AcoI YGGCCR 3 cut(s) 150, 198, 522
AcyI GRCGYC 2 cut(s) 368, 683
AfaI GTAC 2 cut(s) 605, 632
AfiI CCNNNNNNNGG 3 cut(s) 85, 410, 644
AflIII ACRYGT 1 cut(s) 579
AgsI TTSAA 2 cut(s) 232, 362
AluBI AGCT 6 cut(s) 117, 138, 309, 409, 442, 470
AluI AGCT 6 cut(s) 117, 138, 309, 409, 442, 470
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 2 cut(s) 402, 452
AlwI GGATC 1 cut(s) 382
AlwNI CAGNNNCTG 1 cut(s) 289
Ama87I CYCGRG 5 cut(s) 33, 49, 83, 139, 156
AoxI GGCC 4 cut(s) 150, 198, 252, 522
ApeKI GCWGC 1 cut(s) 114
AspLEI GCGC 1 cut(s) 685
AspS9I GGNCC 2 cut(s) 30, 223
AsuC2I CCSGG 1 cut(s) 275
AsuNHI GCTAGC 1 cut(s) 134
AvaI CYCGRG 5 cut(s) 33, 49, 83, 139, 156
AvaII GGWCC 2 cut(s) 30, 223
BanI GGYRCC 2 cut(s) 334, 682
BanII GRGCYC 1 cut(s) 411
BbsI GAAGAC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 1 cut(s) 126
BccI CCATC 1 cut(s) 128
BceAI ACGGC 7 cut(s) 239, 376, 381, 525, 622, 670, 682
BcgI CGANNNNNNTGC 4 cut(s) 103, 113, 137, 147
BcnI CCSGG 1 cut(s) 275
BcoDI GTCTC 2 cut(s) 402, 452
BfaI CTAG 2 cut(s) 135, 443
BfmI CTRYAG 1 cut(s) 713
BfoI RGCGCY 1 cut(s) 686
BisI GCNGC 7 cut(s) 115, 153, 342, 498, 525, 528, 670
BlsI GCNGC 7 cut(s) 116, 154, 343, 499, 526, 529, 671
Bme1390I CCNGG 1 cut(s) 275
Bme18I GGWCC 2 cut(s) 30, 223
BmeT110I CYCGRG 5 cut(s) 33, 49, 83, 139, 156
BmgT120I GGNCC 2 cut(s) 30, 223
BmiI GGNNCC 3 cut(s) 32, 336, 684
BmrFI CCNGG 1 cut(s) 275
BmsI GCATC 1 cut(s) 121
BmtI GCTAGC 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 275
BsaAI YACGTR 1 cut(s) 634
BsaHI GRCGYC 2 cut(s) 368, 683
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 3 cut(s) 84, 201, 686
BsaWI WCCGGW 1 cut(s) 166
BsaXI ACNNNNNCTCC 4 cut(s) 212, 242, 671, 701
Bsc4I CCNNNNNNNGG 3 cut(s) 85, 410, 644
Bse1I ACTGG 1 cut(s) 243
BseDI CCNNGG 3 cut(s) 84, 201, 686
BseGI GGATG 2 cut(s) 96, 136
BseLI CCNNNNNNNGG 3 cut(s) 85, 410, 644
BseMII CTCAG 1 cut(s) 413
BseNI ACTGG 1 cut(s) 243
BseRI GAGGAG 6 cut(s) 194, 278, 329, 332, 342, 494
BseX3I CGGCCG 3 cut(s) 150, 198, 522
BseXI GCAGC 1 cut(s) 126
Bsh1236I CGCG 2 cut(s) 176, 581
Bsh1285I CGRYCG 4 cut(s) 153, 171, 201, 525
BshFI GGCC 4 cut(s) 152, 200, 254, 524
BshNI GGYRCC 2 cut(s) 334, 682
BsiEI CGRYCG 4 cut(s) 153, 171, 201, 525
BsiHKAI GWGCWC 1 cut(s) 411
BsiHKCI CYCGRG 5 cut(s) 33, 49, 83, 139, 156
BsiSI CCGG 5 cut(s) 167, 275, 332, 404, 521
BslFI GGGAC 3 cut(s) 16, 66, 66
BslI CCNNNNNNNGG 3 cut(s) 85, 410, 644
BsmAI GTCTC 2 cut(s) 402, 452
BsmBI CGTCTC 1 cut(s) 402
BsmFI GGGAC 3 cut(s) 16, 66, 66
BsmI GAATGC 1 cut(s) 546
BsnI GGCC 4 cut(s) 152, 200, 254, 524
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 5 cut(s) 33, 49, 83, 139, 156
Bsp1286I GDGCHC 1 cut(s) 411
Bsp143I GATC 1 cut(s) 374
BspANI GGCC 4 cut(s) 152, 200, 254, 524
BspCNI CTCAG 1 cut(s) 412
BspFNI CGCG 2 cut(s) 176, 581
BspLI GGNNCC 3 cut(s) 32, 336, 684
BspOI GCTAGC 1 cut(s) 138
BspPI GGATC 1 cut(s) 382
BspT107I GGYRCC 2 cut(s) 334, 682
BspTNI GGTCTC 1 cut(s) 452
BsrI ACTGG 1 cut(s) 243
BssECI CCNNGG 3 cut(s) 84, 201, 686
BssMI GATC 1 cut(s) 374
BssNI GRCGYC 2 cut(s) 368, 683
Bst4CI ACNGT 1 cut(s) 11
Bst6I CTCTTC 1 cut(s) 20
BstACI GRCGYC 2 cut(s) 368, 683
BstBAI YACGTR 1 cut(s) 634
BstC8I GCNNGC 1 cut(s) 136
BstDEI CTNAG 1 cut(s) 399
BstDSI CCRYGG 1 cut(s) 686
BstF5I GGATG 2 cut(s) 96, 136
BstFNI CGCG 2 cut(s) 176, 581
BstH2I RGCGCY 1 cut(s) 686
BstHHI GCGC 1 cut(s) 685
BstKTI GATC 1 cut(s) 377
BstMAI GTCTC 2 cut(s) 402, 452
BstMBI GATC 1 cut(s) 374
BstMCI CGRYCG 4 cut(s) 153, 171, 201, 525
BstMWI GCNNNNNNNGC 2 cut(s) 341, 347
BstSCI CCNGG 1 cut(s) 273
BstSFI CTRYAG 1 cut(s) 713
BstUI CGCG 2 cut(s) 176, 581
BstV1I GCAGC 1 cut(s) 126
BstV2I GAAGAC 1 cut(s) 48
BstZI CGGCCG 3 cut(s) 150, 198, 522
BsuRI GGCC 4 cut(s) 152, 200, 254, 524
BtgI CCRYGG 1 cut(s) 686
BtsCI GGATG 2 cut(s) 96, 136
Cac8I GCNNGC 1 cut(s) 136
CaiI CAGNNNCTG 1 cut(s) 289
CfoI GCGC 1 cut(s) 685
Cfr13I GGNCC 2 cut(s) 30, 223
CseI GACGC 3 cut(s) 182, 357, 587
Csp6I GTAC 2 cut(s) 604, 631
CviAII CATG 2 cut(s) 190, 617
CviQI GTAC 2 cut(s) 604, 631
DdeI CTNAG 1 cut(s) 399
DinI GGCGCC 1 cut(s) 684
DpnI GATC 1 cut(s) 376
DpnII GATC 1 cut(s) 374
EaeI YGGCCR 3 cut(s) 150, 198, 522
EagI CGGCCG 3 cut(s) 150, 198, 522
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
EciI GGCGGA 1 cut(s) 706
Ecl136II GAGCTC 1 cut(s) 409
EclXI CGGCCG 3 cut(s) 150, 198, 522
Eco24I GRGCYC 1 cut(s) 411
Eco31I GGTCTC 1 cut(s) 452
Eco47I GGWCC 2 cut(s) 30, 223
Eco52I CGGCCG 3 cut(s) 150, 198, 522
Eco53kI GAGCTC 1 cut(s) 409
Eco88I CYCGRG 5 cut(s) 33, 49, 83, 139, 156
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 2 cut(s) 30, 223
EcoT38I GRGCYC 1 cut(s) 411
EgeI GGCGCC 1 cut(s) 684
EheI GGCGCC 1 cut(s) 684
Esp3I CGTCTC 1 cut(s) 402
FaeI CATG 2 cut(s) 193, 620
FaiI YATR 3 cut(s) 191, 236, 618
FaqI GGGAC 3 cut(s) 16, 66, 66
FatI CATG 2 cut(s) 189, 616
FauI CCCGC 1 cut(s) 459
FblI GTMKAC 1 cut(s) 171
Fnu4HI GCNGC 7 cut(s) 115, 153, 342, 498, 525, 528, 670
FokI GGATG 2 cut(s) 83, 143
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 7 cut(s) 115, 153, 342, 498, 525, 528, 670
FspBI CTAG 2 cut(s) 135, 443
GlaI GCGC 1 cut(s) 684
GluI GCNGC 7 cut(s) 115, 153, 342, 498, 525, 528, 670
HaeII RGCGCY 1 cut(s) 686
HaeIII GGCC 4 cut(s) 152, 200, 254, 524
HapII CCGG 5 cut(s) 167, 275, 332, 404, 521
HgaI GACGC 3 cut(s) 182, 357, 587
HhaI GCGC 1 cut(s) 685
Hin1I GRCGYC 2 cut(s) 368, 683
Hin1II CATG 2 cut(s) 193, 620
Hin6I GCGC 1 cut(s) 683
HinP1I GCGC 1 cut(s) 683
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HindIII AAGCTT 1 cut(s) 307
HpaII CCGG 5 cut(s) 167, 275, 332, 404, 521
Hpy166II GTNNAC 1 cut(s) 172
Hpy188I TCNGA 8 cut(s) 101, 130, 250, 433, 570, 593, 610, 664
Hpy188III TCNNGA 7 cut(s) 33, 51, 83, 141, 218, 372, 378
Hpy8I GTNNAC 1 cut(s) 172
Hpy99I CGWCG 7 cut(s) 176, 373, 391, 397, 440, 581, 668
HpyCH4III ACNGT 1 cut(s) 11
HpyCH4IV ACGT 1 cut(s) 633
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 347
HpyF3I CTNAG 1 cut(s) 399
HpySE526I ACGT 1 cut(s) 633
Hsp92I GRCGYC 2 cut(s) 368, 683
Hsp92II CATG 2 cut(s) 193, 620
HspAI GCGC 1 cut(s) 683
KasI GGCGCC 1 cut(s) 682
Kzo9I GATC 1 cut(s) 374
LmnI GCTCC 5 cut(s) 122, 265, 355, 406, 467
Lsp1109I GCAGC 1 cut(s) 126
LweI GCATC 1 cut(s) 121
MaeI CTAG 2 cut(s) 135, 443
MaeII ACGT 1 cut(s) 633
MaeIII GTNAC 6 cut(s) 11, 256, 269, 413, 472, 572
MalI GATC 1 cut(s) 376
MboI GATC 1 cut(s) 374
MboII GAAGA 4 cut(s) 37, 53, 220, 223
MhlI GDGCHC 1 cut(s) 411
MluI ACGCGT 1 cut(s) 579
Mly113I GGCGCC 1 cut(s) 683
MlyI GAGTC 9 cut(s) 41, 119, 155, 188, 239, 392, 523, 622, 707
MmeI TCCRAC 1 cut(s) 687
MseI TTAA 2 cut(s) 162, 303
MslI CAYNNNNRTG 1 cut(s) 621
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 5 cut(s) 167, 275, 332, 404, 521
MspR9I CCNGG 1 cut(s) 275
Mva1269I GAATGC 1 cut(s) 546
MvnI CGCG 2 cut(s) 176, 581
MwoI GCNNNNNNNGC 2 cut(s) 341, 347
NarI GGCGCC 1 cut(s) 683
NciI CCSGG 1 cut(s) 275
NdeII GATC 1 cut(s) 374
NheI GCTAGC 1 cut(s) 134
NlaIII CATG 2 cut(s) 193, 620
NlaIV GGNNCC 3 cut(s) 32, 336, 684
NmeAIII GCCGAG 2 cut(s) 176, 226
NmuCI GTSAC 3 cut(s) 256, 269, 472
PcsI WCGNNNNNNNCGW 5 cut(s) 203, 383, 392, 582, 660
PctI GAATGC 1 cut(s) 546
PfeI GAWTC 4 cut(s) 107, 214, 280, 293
PflFI GACNNNGTC 1 cut(s) 697
PkrI GCNGC 7 cut(s) 116, 154, 343, 499, 526, 529, 671
PleI GAGTC 9 cut(s) 41, 119, 154, 188, 239, 391, 522, 621, 706
PluTI GGCGCC 1 cut(s) 686
PpsI GAGTC 9 cut(s) 41, 119, 154, 188, 239, 391, 522, 621, 706
Ppu21I YACGTR 1 cut(s) 634
PpuMI RGGWCCY 2 cut(s) 30, 223
Psp124BI GAGCTC 1 cut(s) 411
Psp5II RGGWCCY 2 cut(s) 30, 223
PspN4I GGNNCC 3 cut(s) 32, 336, 684
PspPI GGNCC 2 cut(s) 30, 223
PspPPI RGGWCCY 2 cut(s) 30, 223
PstNI CAGNNNCTG 1 cut(s) 289
PsyI GACNNNGTC 1 cut(s) 697
RsaI GTAC 2 cut(s) 605, 632
RsaNI GTAC 2 cut(s) 604, 631
RseI CAYNNNNRTG 1 cut(s) 621
SacI GAGCTC 1 cut(s) 411
SalI GTCGAC 1 cut(s) 170
SaqAI TTAA 2 cut(s) 162, 303
SatI GCNGC 7 cut(s) 115, 153, 342, 498, 525, 528, 670
Sau3AI GATC 1 cut(s) 374
Sau96I GGNCC 2 cut(s) 30, 223
SchI GAGTC 9 cut(s) 41, 119, 155, 188, 239, 392, 523, 622, 707
ScrFI CCNGG 1 cut(s) 275
SduI GDGCHC 1 cut(s) 411
SfaNI GCATC 1 cut(s) 121
SfcI CTRYAG 1 cut(s) 713
SfoI GGCGCC 1 cut(s) 684
SinI GGWCC 2 cut(s) 30, 223
SmiMI CAYNNNNRTG 1 cut(s) 621
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
SspDI GGCGCC 1 cut(s) 682
SspMI CTAG 2 cut(s) 135, 443
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 1 cut(s) 273
TaaI ACNGT 1 cut(s) 11
TaiI ACGT 1 cut(s) 636
TaqI TCGA 5 cut(s) 123, 171, 186, 585, 654
TaqII GACCGA 1 cut(s) 286
TauI GCSGC 6 cut(s) 155, 344, 500, 527, 530, 672
TfiI GAWTC 4 cut(s) 107, 214, 280, 293
Tru1I TTAA 2 cut(s) 162, 303
Tru9I TTAA 2 cut(s) 162, 303
TseFI GTSAC 3 cut(s) 256, 269, 472
TseI GCWGC 1 cut(s) 114
Tsp45I GTSAC 3 cut(s) 256, 269, 472
TspDTI ATGAA 1 cut(s) 54
TspGWI ACGGA 6 cut(s) 68, 70, 275, 491, 552, 710
Tth111I GACNNNGTC 1 cut(s) 697
VpaK11BI GGWCC 2 cut(s) 30, 223
XmiI GTMKAC 1 cut(s) 171
XspI CTAG 2 cut(s) 135, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.